Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP006881 3,482,782 T→G 16.6% T152T (ACA→ACC U712_17880 ← UDP‑N‑acetylglucosamine 2‑epimerase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0068813,482,7820TG16.6% 110.6 / 4.0 61T152T (ACA→ACCU712_17880UDP‑N‑acetylglucosamine 2‑epimerase
Reads supporting (aligned to +/- strand):  ref base T (13/34);  new base G (9/2);  total (25/36)
Fisher's exact test for biased strand distribution p-value = 1.48e-03
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

CTCACCCACCTGATCGAGAACAGGATGTGAGTAACCATCCCTAACCGTTGTGTTGAGTGCGTCAATCGCTGTATTGCCCGTTACAAAAATAGAGTCGGCCTTTTTGTTTTCTTTTAATAAATTGTCTTTCGCCTGGCCTGTCGGAGCAAAATGCAAATCAGCAATCGCCCCTGTCATCTGTCGATTGAGCTCTTCCGGAAACGGGGAATACTTATTCCCTGTACGGAGCCCCGCCTCCACATGACCGACAGCAATTTGATGGTAAAAAGC  >  CP006881/3482644‑3482913
                                                                                                                                          |                                                                                                                                   
cTCACCCACCTGATCGAGAACAGGATGTGAGTAACCATCCCTAACCGTTGTGTTGAGTGCGTCAATCGCTGTATTGCCCGTTACAAAAATAGAGTCGGCCGTTTTTTTTTGTTTTTATAAATTTTGTTTggcctggcct                                                                                                                                     >  6:293172/1‑139 (MQ=255)
    cccaccTGATCGAGAACAGGATGTGAGTAACCATCCCTAACCGTTGTGGTGAGTGCGTCAATCGCTGTATTGCCCGTTACAAAAATAGAGTCGGCCTTTTTGTTTTCTTTTAATAAATTGTCTTTCGCCTGGCCTGTCg                                                                                                                                 <  8:354512/139‑1 (MQ=255)
         cagATCGAGAACAGGATGTGAGTAACCATCCCTAACCGTTGTGTTGAGTGCGTCAATCGCTGTATTGCCCGTTACAAAAATAGAGTCGGCCTTTTTGTTTTCTTTTAATAAATTGTCTTTCGCCTGGCCTGTCGGAGCa                                                                                                                            <  5:142491/137‑1 (MQ=255)
            aTCGAGAACAGGATGTGAGTAACCATCCCTAACCGTTGTGTTGAGTGCGTCAATCGCTGTATTGCCCGTTACAAAAATAGAGTCGGCCTTTTTGTTTTCTTTTAATAAATTGTCTTTCGCCTGGCCGGTCGGAGCaaaa                                                                                                                         >  7:118281/1‑139 (MQ=255)
            aTCGAGAACAGGATGTGAGTAACCATCCCTAACCGTTGTGTTGAGTGCGTCAATCGCTGTATTGCCCGTTACAAAAATAGAGTCGGCCGTTTTGTTTTCGTTTTATAAATTGTCTTTCGGCGGGGCTGTGGGAGCaaaa                                                                                                                         >  2:44884/1‑139 (MQ=255)
             tCGAGAACAGGATGTGAGTAACCATCCCTAACCGTTGTGTTGAGTGCGTCAATCGCTGTAATGCCCGTTACAAAAATAGAGTCGGGCTAGTTATGTTCTTTTAATAAATAATATATTGCCGGGCCTGTGGGAGCaaaa                                                                                                                         >  1:137019/1‑138 (MQ=255)
                   aCAGGATGTGAGTAACCATCCCTAACCGTTGTGTTGAGTGCGTCAATCGCTGTATTGCCCGTTACAAAAATAGAGTCGGCCTTTTTGTTTTCTTTTAATAAATTGTCTTTCGCCTGGCCTGTCGGAGCAAAATGCAAAt                                                                                                                  <  4:41130/139‑1 (MQ=255)
                   aCAGGATGTGAGTAACCATCCCTAACCGTTGTGTTGAGTGCGTCAATCGCTGTATTGCCCGTTACAAAAATAGAGTCGGCCTTTTTGTTTTCTTTTAATAAATTGTCTTTCGCCTGGCCTGTCGGAGCAAAATGCAAAt                                                                                                                  <  1:299047/139‑1 (MQ=255)
                       gATGTGAGTAACCATCCCTAACCGTTGTGTTGAGTGCGTCAATCGCTGTATTGCCCGTTACAAAAATAGAGTCGGCCGTTTTGTTTTATTTTTATAAATTGTCTTTAGCCGGGCCGGTAGGTCCAAAAATCaaaacctg                                                                                                              >  6:142491/1‑134 (MQ=255)
                           tgAGTAACCATCCCTAACCGTTGTGTTGAGTGCGTCAATCGCTGTATTGCCCGTTACAAAAATAGAGTCGGCCTTTTTGTTTTCTTTTAATAAATTGTCTTTCGCCTGGCCTGTCGGAGCAAAATGCAAATCAGCAAt                                                                                                           <  1:353489/138‑1 (MQ=255)
                           tgAGTAACCATCCCTAACCGTTGTGTTGAGTGCGTCAATCGCTGTATTGCCCGTTACAAAAATAGAGTCGGCCTTTTTGTTTTCTTTTAATAAATTGTCTTTCGCCTGGCCTGTCGGAGCAAAATGCAAATCAGCAAt                                                                                                           <  8:287088/138‑1 (MQ=255)
                           tgAGTAACCATCCCTAACCGTTGTGTTGAGTGCGTCAATCGCTGTATTGCCCGTTACAAAAATAGAGTCGGCCTTTTTGTTTTCTTTTAATAAATTGTCTTTCGCCTGGCCTGTCGGAGCAAAATGCAAATCAGCAAt                                                                                                           <  1:248686/138‑1 (MQ=255)
                           tgAGTAACCATCCCTAACCGTTGTGTTGAGTGCGTCAATCGCTGTATTGCCCGTTACAAAAATAGAGTCGGCCTTTTTGTTTTCTTTTAATAAATTGTCTTTCGCCTGGCCTGTCGGAGCAAAATGCAAATCAGAAAt                                                                                                           <  7:263628/138‑1 (MQ=255)
                            gAGTAACCATCCCTAACCGTTGTGTTGAGTGCGTCAATCGCTGTATTGCCCGTTACAAAAATAGAGTCGGCCGTTTTTTTTTCTTTTTATAAATTTTCTTTTGCCTGGCGAGTAGGAGCAAAATTCAAATCAGCAATCg                                                                                                         >  5:185351/1‑139 (MQ=255)
                             aGTAACCATCCCTAACCGTTGTGTTGAGTGCGGCAATCGCTGTATTGCCCGTTACAAAAATAGAGTCGGCCTTTTTGTTTTCTTTTAATAAATTGTCTTTCGCCTGGCCTGTCGGAGCAAAATGCAAATCAGCAATCg                                                                                                         <  5:366942/138‑1 (MQ=255)
                                 aCCATCCCTAACCGTTGTGTTGAGTGCGTCAATCGCTGTATTGCCCGTTACAAAAATAGAGTCGGGCTTTTTTTTTTCGTTTTATAAAATGTTGTTCGGCTTGCCGTTCGGAGCATAATGCAAATCCGCAATCGCCCCt                                                                                                    >  8:359190/1‑139 (MQ=255)
                                 aCCATCCCTAACCGTTGTGTTGAGTGCGTCAATCGCTGTATTGCCCGTTACAAAAATAGAGTCGGGCTTTTTTATTAATTTAAATAAATAGTCTTTCGCCTTGCCAGTCGGAGCAAAAAGCAAATCAGCAATCGCCCCt                                                                                                    >  8:17217/1‑139 (MQ=255)
                                 aCCATCCCTAACCGTTGTGTTGAGTGCGTCAATCGCTGTATTGCCCGTTACAAAAATAGAGTCGGCCTTTTTGTTTTCTTTTAATTAATTGTGTTTCGCCTGGCCGGTCGGAGCAAAATGCAAATCAGCAATCGCCCCt                                                                                                    >  8:87673/1‑139 (MQ=255)
                                 aCCATCCCTAACCGTTGTGTTGAGTGCGTCAATCGCTGTATTGCCCGTTACAAAAATAGAGTCGGCCGTTTTTTTTTCTTTTTATTAAATGTCTTTGGCCGTGGCTGTCGGCGCAACATGCAAATCAGCAATAGccccg                                                                                                    >  6:160405/1‑138 (MQ=255)
                                  ccATCCCTAACCGTTGTGTTGAGTGCGTCAATCGCTGTATTGCCCGTTACAAAAATAGAGTCGGGCGGGTTGTTTTGGTTTTATTAATTGTCTTTGGGCGGGGCGGGGGGTGCAAAAAGGAGATGAGCAAGAGcccccg                                                                                                   >  2:248686/1‑137 (MQ=255)
                                     tCCCTAACCGTTGTGTTGAGTGCGTCAATCGCTGTATTGCCCGTTACAAAAATAGAGTCGGCCTTTTTGTTTTCTTTTAATAAATTGTCTTTCGCCTGGCCTGTCGGAGCAAAATGCAAATCAGCAATCGCCCCTGTCa                                                                                                >  6:322437/1‑139 (MQ=255)
                                     tCCCTAACCGTTGTGTTGAGTGCGTCAATCGCTGTATTGCCCGTTACAAAAATAGAGTCGGCCGTTTTTTTTTTTTTTAATAAATTGTCTTTAGCCGGGCAGGTCGGAGCAAAATGCAAAAGATCAAACGccccggggc                                                                                                >  5:341418/1‑134 (MQ=255)
                                       ccTAACCTTTGTGTTGAGTGCGTCAATCGCTGTATTGCCCGTTACAAAAATAGAGTCGGCCTTTTTGTTTTATTTTTATAAATTGTGTTTCGCCTGGCCTGTCGGAGCAAAATGGAAATCAGCAATCGCCCCAGTCATc                                                                                              >  7:289823/1‑139 (MQ=255)
                                       ccTAACCGTTGTGTTGAGTGCGTCAATCGCTGTATTGCCCGTTACAAAAATAGAGTCGGGCTTTTTGTTTTGTTTTAATAAATTGTAATTAGCCTGGCCGGTCGGAGCAAAATGCAAAACAGCAAACGCCCCTGTCATc                                                                                              >  5:271254/1‑139 (MQ=255)
                                       ccTAACAGTTGTGTTGAGTGCGTCAATCGCTGTATTTCCCCTAACAAAAATACAGTCTCCCAAATTTTTATATTTTAATAAATTTTCATTAACCAGTCCATTAGGAGCAAAAAGAAAAAACGCAATAACCCCTTTcta                                                                                               >  4:355282/1‑136 (MQ=255)
                                                tgtgTTGAGTGCGTCAATCGCTGTATTGCCCGTTACAAAAATAGAGTCGGCCTTTTTGTTTTCTTTTAATAAATTGTCTTTCGCCTGGCCTGTCGGTGCAAAATGCAAATCAGCCATCGCCCCTGTCCTCTGTCGATTg                                                                                     >  5:348349/1‑139 (MQ=255)
                                                tgtgTTGAGTGCGTCAATCGCTGTATTGCCCGTTACAAAAATAGAGTCGGCCTTTTTGTTTTCTTTTAATAAATTGTCTTTCGCCTGGCCTGTCGGAGCAAAATGCAAATCAGCAATCGCCCCTGTCATCTGTCGATTg                                                                                     >  7:15479/1‑139 (MQ=255)
                                                tgtgTTGAGTGCGTCAATCGCTGTATTGCCCGTTACAAAAATAGAGTCGGCCGTTTTGTTTTATTTTAATAAATTTTCTTTAGCCTGGCCTGTCGGAGCAAAATTCAAATAACAAATCGCCCCTGTAAACAGTCGATTg                                                                                     >  1:231983/1‑139 (MQ=255)
                                                             tCAATCGCTGTATTGCCCGTTACAAAAATAGAGTCGGCCTTTTTGTTTTCTTTTAATAAATTGTCTTTCGCCTGGCCTGTCGGAGCAAAATGCAAATCAGCAATCGCCCCTGTCATCTGTCGATTGAGCTCTTCCGGaa                                                                        <  7:299744/139‑1 (MQ=255)
                                                             tCAATCGCTGTATTGCCCGTTACAAAAATAGAGTCGGCCTTTTTGTTTTCTTTTAATAAATTGTCTTTCGCCTGGCCTGTCGGAGCAAAATGCAAATCAGCAATCGCCCCTGTCATCTGTCGATTGAGCTCTTCCGGaa                                                                        <  7:294704/139‑1 (MQ=255)
                                                                aTCGCTGTATTGCCCGTTACAAAAATAGAGTCGGCCTTTTTGTTTTTTTTTAATAAATTGTCTTTGGCCTGGCCTGTGGGAGCAAATTGCAAATCAGCAATCGCCCCTGTCATCTGTCGATTGAGCTCTTCCGGAAACg                                                                     <  2:137019/139‑1 (MQ=255)
                                                                aTCGCTGTATTGCCCGTTACAAAAATAGAGTCGGCCTTTTTGTTTTCTTTTAATAAATTGTCTTTCGCCTGGCCTGTCGGAGCAAAATGCAAATCAGCAATCGCCCCTGTCATCTGTCGATTGAGCTCTTCCGGAAACg                                                                     <  1:334454/139‑1 (MQ=255)
                                                                   gCTGTATTGCCCGTTACAAAAATAGAGTCGGCCTTTTTGTTTTCTTTTAATAAATTGTCTTTCGCCTGGCCTGTCGGAGCAAAATGCAAATCAGCAATCGCCCCTGTCATCTGTCGATTGAGCTCTTCCGGAAACgggg                                                                  <  8:118281/139‑1 (MQ=255)
                                                                   gCTGTATTGCCCGTTACAAAAATAGAGTCGGCCTTTTTGTTTTCTTTTAATAAATTGTCTTTCGCCTGGCCTGTCGGAGCAAAATGCAAATCAGCAATCGCCCCTGTCATCTGTCGATTGAGCTCTTCCGGAAACgggg                                                                  <  8:15479/139‑1 (MQ=255)
                                                                   gCTGTATTGCCCGTTACAAAAATAGAGTCGGCCTTTTTGTTTTCTTTTAATAAATTGTCTTTCGCCTGGCCTGTCGGAGCAAAATGCAAATCAGCAATCGCCCCTGTCATCTGTCGATTGAGCTCTTCCGGAAACgggg                                                                  <  4:210473/139‑1 (MQ=255)
                                                                   gCTGTATTGCCCGTTACAAAAATAGAGTCGGCCTTTTTGTTTTCTTTTAATAAATTGTCTTTCGCCTGGCCTGTCGGAGCAAAATGCAAATCAGCAATCGCCCCTGTCATCTGTCGATTGAGCTCTTCCGGAAACgggg                                                                  <  5:322437/139‑1 (MQ=255)
                                                                     tGTAATGCCCGTTACAAAAATAGAGTCGGCCTTTTTGTTTTCTTTTAATAAATTGTCTTTCGCCTGGCCTGTCGGAGCAAAATGCAAATCAGCAATCGCCCCTGTCATCTGTCGATTGAGCTCTTCCGGAAACGGGGaa                                                                <  7:112110/139‑1 (MQ=255)
                                                                     aggaTTGCCCGTTACAAAAATAGAGGCGGCCTTTTTGTTTTCTTTTAATAAATTGTCTTTCGCCTGGCCTGTCGGAGCAAAATGCAAATCAGCAATCGCCCCTGTCATCTGTCGATTGAGCGCTTCCGGAAACGGGGaa                                                                <  6:288567/136‑1 (MQ=255)
                                                                       tATTGCCCGTTACAAAAATAGAGTCGGCCTTTTTGTTTTCTTTTAATAAATTGTCTTTCGCCTGGCCTGTCGGAGCAAAATGCAAATCAGCAATCGCCCCTGTCATCTGTCGATTGAGCTCTTCCGGAAACGGGGaa                                                                <  6:140377/137‑1 (MQ=255)
                                                                       tATTGCCCGTTACAAAAATAGAGTCGGCCTTTTTGTTTTCTTTTAATAAATTGTCTTTCGCCTGGCCTGTCGGAGCAAAATGCAAATCAGCAATCGCCCCTGTCATCTGTCGATTGAGCTCTTCCGGAAACGGGGaa                                                                <  7:158573/137‑1 (MQ=255)
                                                                       tATTGCCCGTTACAAAAATAGAGTCGGCCTTTTTGTTTTCTTTTAATAAATTGTCTTTCGCCTGGCCTGTCGGAGCAAAATGCAAATCAGCAATCGCCCCTGTCATCTGTCGATTGAGCTCTTCCGGAAACGGGGaa                                                                <  1:94428/137‑1 (MQ=255)
                                                                       tATTGCCCGTTACAAAAATAGAGTCGGCCTTTTTGTTTTCTTTTAATAAATTGTCTTTCGCCTGGCCTGTCGGAGCAAAATGCAAATCAGCAATCGCCCCTGTCATCTGTCGATTGAGCTCTTCCGGAAACGGGGAAt                                                               <  5:181791/138‑1 (MQ=255)
                                                                       tATTGCCCGTTACAAAAATAGAGTCGGCCTTTTTGTTTTCATTTAATAAATTGTCTTTCGCCTGGCCTGTCGGAGCAAAATGCAAATCAGCAATCGCCCCTGTCATCTGTCGATTGAGCTCTTCCGGAAACGGGGaa                                                                <  1:98427/137‑1 (MQ=255)
                                                                       tATTGCCCGATACAAAAATAGAGTCGGCCTTTTTGTTTTCTTTTAATAAATTGTCTTTCGCCTGGCCTGTCGGAGCAAAATGCAAATCAGCAATCGCCCCTGTCATCTGTCGATTGAGCTCTTCCGGAAACGGGGaa                                                                <  7:319188/137‑1 (MQ=255)
                                                                           gCCCGTTACAAAAATAGAGTCGGCCTTTTTGTTTTCTTTTAATAAATTGTCTTTCGCCTGGCCTGTCGGAGCAAAATGCAAATCAGCAATCGCCCCTGTCATCTGTCGATTGAGCTCTTCCGGAAACGGGGAATACtt                                                           <  5:293172/138‑1 (MQ=255)
                                                                           gCCCGTTACAAAAATAGAGTCGGACTTTTTGTTTTCTTTTAATAAATTGTCTTTCGCCTGGCCTGTCGGAGCAAAATGCAAATCAGCAATCGCCCCTGTCATCTGTCGATTGAGCTCTTCCGGAAACGGGGAATACtt                                                           <  6:341418/138‑1 (MQ=255)
                                                                            cccGTTACAAAAATAGAGTCGGGCGTTTTTTTTTGTTTTTATTAATTTTGTTTAGGCTGGGCGGTGGGAGCAAAAATGAAATAACCAATAGGCCCGGTGATATGTAGATTTTGCGCTTAGGGATACCGGGAATaacttt                                                         >  6:181791/1‑134 (MQ=255)
                                                                            cacGTTACAAAACTAGCTGCGGCCTTTTTGTCTTCTTTTAATAAATTGTCTTTCGCCTGGCCTGGCGGAGCAAAATGCAAAACAGCAATCGCCCCTGTCATCTGTCGATTGAGCTCTTCCGGAAACGGGGAATACTTAt                                                         <  6:290504/137‑1 (MQ=255)
                                                                               gTTACAAAACTCCTGCCGGCCTTTTTGTTTTCTTTAAATAATTTGTCTTTCGCCTGGCCGGTCGGAGCAAAATGCAAATCAGCAATCGCCCCTGTCATCTGTCGATTGAGCTCTTCCGGAAACGGGGAATACTTATTcc                                                      <  1:183263/139‑1 (MQ=255)
                                                                               gTTACAAAAATAGAGTCGGCCTTTTTGTTTTCTTTTAATAAATTGTCTTTCGCCTGGCCTGTCGGAGCAAAATGCAAATCAGCAATCGCCCCTGTCATCTGTCGATTGAGCTCTTCCGGAAACGGGGAATACTTATTcc                                                      <  8:289823/139‑1 (MQ=255)
                                                                                 tACAAAAATAGAGTCGGGCTTTTTGTTTTCTTTTAATAAATTGTGTTTCGCCTGGGCTGGCGGCGCAAAATGCAAATCAGCAATCGCCCCTGTCATCTGTCGATTGAGCTCTTGCGGTAACGGGGAATAAGTATTACCt                                                    >  7:197597/1‑139 (MQ=255)
                                                                                 tACAAAAATAGAGTCGGGCGTTTTGTTTTCTTTTTATTAATTTTGATTCGCCGGGCCGGTCGGGGCAAAATGCAAATAATCAATCGCCCCGGGCATAAGTGGCTTTAGCTCATACGGAAAACGGGCATACATATTaccg                                                    >  8:171891/1‑138 (MQ=255)
                                                                                 tACAAAAATAGAGTCGGCCTTTTTGTTTTGTTTTTATAAATTTTATTTCGCCGGGCCTGTCGGCGGAAAATGCAAATCAGCAATCGCCCCTGTCATCTGTCGGTTGAGCTCTTCCGGAAACGGGGTATACTTATTgccg                                                    >  5:140235/1‑138 (MQ=255)
                                                                                    aaaaaTAGAGTCGGCCTTTTTGTTTTCTTTTAATAAATTGTCTTTCGCCTGGCCTGTCGGAGCAAAATGCAAATCAGCAATCGCCCCTGTCATCTGTCGATTGAGCTCTTCCGGAAACGGGGAATACTTATTCCCTGTa                                                 <  4:115827/139‑1 (MQ=255)
                                                                                        aTAGAGTCGGCCTTTTTGTTTTCTTTTAATAAATTGTCTTTCGCCTGGCCTGTCGGAGCAAAATGCAAATCAGCAATCGCCCCTGTCATCTGTCGATTGAGCTCTTCCGGAAACGGGGAATACTTATTCCCTGTACGGa                                             <  4:303772/139‑1 (MQ=255)
                                                                                        aTAGAGTCGGCCTTTTTGTTTTCTTTTAATAAATTGTCTTTCGCCTGGCCTGTCGGAGCAAAATGCAAATCAGCAATCGCCCCTGTCATCTGTCGATTGAGCTCTTCCGGAAACGGGGAATACTTAATCCCTGTACGGa                                             <  8:229174/139‑1 (MQ=255)
                                                                                               cGGCCTTTTAGCTTACTTTAAATAAATTGTCTTTCGCAGGGCCGGCCGGAGCAAAATCAAAATCAGCAATCGCCCCTGTCATCTGTCGAAAGAGCTCTTCCGGAAACGGGGAATACTTATTCCCTGTACGGAGCCCCGc                                      <  1:180770/139‑1 (MQ=255)
                                                                                                            ttCTTTTAATAAATTGTCTTTCGCCTGGCCTGTCGGAGCAAAATGCAAATCAGCAATCGCCCCTGTCATCt                                                                                             <  1:260406/71‑1 (MQ=255)
                                                                                                            ttCTTTTAATAAATTGTCTTTCGCCTGGCCTGTCGGAGCAAAATGCAAATCAGCAATCGCCCCTGTCATCt                                                                                             >  2:260406/1‑71 (MQ=255)
                                                                                                                       aaTTGTCTTTCGCCTGGCCTGTCGGAGCAAAATGCAAATCAGCAATCGCCCCTGTCATCTGTCGATTGAGCTCTTCCGGAAACGGGGAATACTTATTCCCTGTACGGAGCCCCGCCTCCACATGACCGACAGCAATTTg              <  2:231983/139‑1 (MQ=255)
                                                                                                                               ttCGCCTGGCCTGTCGGAGCAAAATGCAAATCAGCAATCGCCCCTGTCATCTGTCGATTGAGCTCTTCCGGAAACGGGGAATACTTATTCCCTGTACGGAGCCCCGCCTCCACATGACCGACAGCAATTTGATGGTaa       >  3:86483/1‑138 (MQ=255)
                                                                                                                                 cGCCTGGCCTGTCGGAGCAAAATGCAAATCAGCAATCGCCCCTGTCATCTGTCGATTGAGCTCTTCCGGAAACGGGGAATACTTATTCCCTGTACGGAGCCCCGCCTCCACATGACCGACAGCAATTTGATGGTaaa      >  8:53539/1‑137 (MQ=255)
                                                                                                                                  gcctggcctgTCGGAGCAAAATGCAAATCAGCAATCGCCCCTGTCATCTGTCGATTGAGCTCTTCCGGAAACGGGGAATACTTATTCCCTGTACGGAGCCCCGCCTCCACATGACCGACAGCAATTTGATGGTaaaaa    <  6:185351/138‑1 (MQ=255)
                                                                                                                                   cctggcctgTCGGAGCAAAATGCAAATCAGCAATCGCCCCTGTCATCTGTCGATTGAGCTCTTCCGGAAACGGGGAATACTTATTACCTGTACGGAGCCCCGCCTCCACATGACCGACAGCAATTTGATGGTAAAAAGc  >  4:42619/1‑139 (MQ=255)
                                                                                                                                          |                                                                                                                                   
CTCACCCACCTGATCGAGAACAGGATGTGAGTAACCATCCCTAACCGTTGTGTTGAGTGCGTCAATCGCTGTATTGCCCGTTACAAAAATAGAGTCGGCCTTTTTGTTTTCTTTTAATAAATTGTCTTTCGCCTGGCCTGTCGGAGCAAAATGCAAATCAGCAATCGCCCCTGTCATCTGTCGATTGAGCTCTTCCGGAAACGGGGAATACTTATTCCCTGTACGGAGCCCCGCCTCCACATGACCGACAGCAATTTGATGGTAAAAAGC  >  CP006881/3482644‑3482913

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: