| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP006881 | 3,503,555 | T→G | 14.8% | N590H (AAC→CAC) | U712_17960 ← | Beta‑N‑acetylglucosaminidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 3,503,555 | 0 | T | G | 14.8% | 156.3 / 4.1 | 78 | N590H (AAC→CAC) | U712_17960 | Beta‑N‑acetylglucosaminidase |
| Reads supporting (aligned to +/- strand): ref base T (19/46); new base G (11/2); total (30/48) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.99e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AGTTGATGTTGCTGTATTAATGTACGTGAGCGATACGTAAGCCGCTCCGTCTGTTTGCGGACTTACTGTCATTTGTTTTTGGACCATATCACGAAGCGAGAGATTGTAGTTTGTTTTCATGATTTGCGGGCCGTTTTTGATCTTCACGATAGATGATGTCCATCCGTATAATTGTTTTAGCTTCGTTGATGCCGCAGCAGCTGTATCATTGCCTGTGAACTGCTCATTTACGCTGATTTTATAAAGCGTATTGCTTTTCGTTGTATAGCT > CP006881/3503421‑3503690 | aGTTGATGTTGCTGTATTAATGTACGTGAGCGATACGTAAGCCGCTCCGTCTGTTTGCGGACTTACTGTCATTTGTTTTTGGACCATATCACGAAGCGAGAGATTGTAGTTTGTTTTCATGATTTGCGGGCCGTTTTTg < 1:10743/139‑1 (MQ=255)aGTTGATGTTGCTGTATTAATGTACGTGAGCGATACGTAAGCCGCTCCGTCTGTTTGCGGACTTACTGTCATTTGTTTTTGGACCATATCACGAAGCGAGAGATTGTAGTTTGTTTTCATGATTTGCGGGCCGTTTTTg < 3:311599/139‑1 (MQ=255) ttGATGTTGCTGTATTAATGTACGTGAGCGATACGTAAGCCGCTCCGTCTGTTTGCGGACTTACTGTCATTTGTTTTTGGACCATATCACGAAGCGAGAGATTGTAGTTTGTTTTCATGATTTGCGGGCCGTTTTTgt > 5:362367/1‑137 (MQ=255) ttGATGTTGCTGTATTAATGTACGTGAGCGATACGTAAGCCGCTCCGTCTGTTTGCGGACTTACTGTCATTTGTTTTTGGACCATATCACGAAGCGAGAGATTGTAGTTTGTTTTCATGATTTGCGGGCCGTTTTTGAt > 8:239658/1‑139 (MQ=255) ttGCTGTATTAATGTACGTGAGCGATACGTAAGCCGCTCCGTCTGTTTGCGGACTTACTGTCATTTGTTTTTGGACCATATCACGAAGCGAGAGATTGTAGTTTGTTTTCATGATTTGCGGGCCGTTTTTGATCTTCa < 6:68868/138‑1 (MQ=255) gCTGTATTAATGTACGTGAGCGATACGTAAGCCGCTCCGTCTGTTTGCGGACTTACTGTCATTTGTTTTTGGACCATATCACGAAGCGAGAGATTGTAGTTTGTTTTCATGATTTGCGGGCCGTTTTTGATCTTCACGa > 5:136407/1‑139 (MQ=255) tATTAATGTACGTGAGCGATACGTAAGCCGCTCCGTCTGTTTGCGGACTTACTGTCATTTGTTTTTGGACCATATCACGAAGCGAGAGATTGTAGTTTGTTTTCATGATTTGCGGGCCGTTTTTGATCTTCACGATAga > 3:165768/1‑139 (MQ=255) tAATGTACGTGAGCGATACGTAAGCCGCTCCGTCTGTTTGCGGACTTACTGTCATTTGTTTTTGGACCATATCACGAAGCGAGAGATTGTAGTTTGTTTTCATGATTTGCGGGCCGTTTTTGATCTTCACGATAgatg < 1:60172/138‑1 (MQ=255) aTGTACGTGAGCGATACGTAAGCCGCTCCGTTTGTTTGCGGACTTACTGTCATTTGTTTTTGGACCATATCACGAAGCGAGAGATTGTAGTTTGTTTTCATGATTTGCGGGCCGTTTTTGATCTTCACGATAGatgatg < 5:46302/139‑1 (MQ=255) aTGTACGTGAGCGATACGTAAGCCGCTCCGTCTGTTTGCGGACTTACTGTCATTTGTTTTTGGACCATATCACGAAGCGAGAGATTGTAGTTTGTTTTCATGATTTGCGGGCCGTTTTTGATCTTCACGATAGatgatg > 8:228704/1‑139 (MQ=255) tACGTGAGCGATACGTAAGCCGCTGCGTCTGTTTGCGGACTTACTGTCATTTGTTTTTGGACCATATCACGAAGCGAGAGATTGTAGTTTGTTTTCATGATTTGCGGGCCGTTTTTGATCTTCACGATAGATGATGtg < 4:264677/138‑2 (MQ=255) tACGTGAGCGATACGTAAGCCGCTCCGTCTGTTTGCGGACTTACTGTCATTTGTTTTTGGACCATATCACGAAGCGAGAGATTGTAGTTTGTTATCATGATTTGCGGGCCGTTTTTGATCTTCACGATAGATGATGTcc < 4:319641/139‑1 (MQ=255) cGTTAGCGAGACGGAAGCCGCTCCGTCTGTTTGCTGACTTACTGTCATTTGTTTTTGGACCATATCACGAAGCGAGAGATTGTAGTTTGTTTTCATGATTTGCGGGCCGTTTTTGATCTTCACGATAGATGATGTCCAt < 1:256735/139‑1 (MQ=255) cGTGAGCGATACGTAAGCCGCTCCGTCTGTTTGCGGACTTACTGTCATTTGTTTTTGGACCATATCACGAAGCGAGAGATTGTAGTTTGTTTTCATGATTTGCGGGCCGTTTTTTTTGTTTACGATTGGTGATGTGCaa > 5:213004/1‑138 (MQ=255) cGTGAGCGATACGTAAGCCGCTCCGTCTGTTTGCGGACTTACTGTCATTTGTTTTTGGACCATATCACGAAGCGAGAGATTGTAGTTTGTTTTCATGATTTGCGGGCCGTTTTTGATGTTCAACCTAGAtgttgtgcct > 6:105944/1‑135 (MQ=255) cGTGAGCGATACGTAAGCCGCTCCGTCTGTTTGCGGACTTACTGTCATTTGTTTTTGGACCATATCACGAAGCGAGAGATTGTAGTTTGTTTTCATGATTTGCGGGCCGTTTTTGATCTTTACGATAGATGATGTCCAt > 5:161312/1‑139 (MQ=255) cGTGAGCGATACGTAAGCCGCTCCGTCTGTTTGCGGACTTACTGTCATTTGTTTTTGGACCATATCACGAAGCGAGAGATTGTAGTTTGTTTTCATGATTTGCGGGCCGTTTTTGATCTTCACGATAGATGATGTCCAt < 7:299907/139‑1 (MQ=255) cGTGAGCGATACGTAAGCCGCTCCGTCTGTTTGCGGACTTACTGTCATTTGTTTTTGGACCATATCACGAAGCGAGAGATTGTAGTTTGTTTTCATGATTTGCGGGCCGTGTTTTTTGTTCACGATTGGTTATGTGCAt > 1:285093/1‑139 (MQ=255) cGTGAGCGATACGTAAGCCGCTCCGTCTGTTTGCGGACTTACTGTCATTTG‑TTTTGGACCATATCACGAAGCGAGAGATTTTAGTTAGTATTCATGATTTGCGGGCCGTGTTTGATATTAACGATATATGATTTCCATc > 2:214166/1‑139 (MQ=255) cGTGAGCGATACGTAAGCCGCTCCGTCTGGTTGCGGACTTCCTGTCATTTGTTTTTGGCCCTTATCACGAAGCGAGAGATTGTAGTTTGTTTTCATGATTTGCGGGCCGTGTTTGATCGTCCCGGTGGATGAGGtgcgt > 2:223633/1‑135 (MQ=255) aGCGATACGTAAGCCGCTCCGTCTGTTTGCGGACTTACTGTCATTTGTTTTTGGACCATATCACGAAGCGAGAGATTGTAGTTTGTTTTCATGATTTGCGGGCCGTGTTTGGTGGTGCCGATAGATGTTGTGCATCCgg > 5:101545/1‑138 (MQ=255) aTACGTAAGCCGCTCCGTCTGTTTGCGGACTTACTGTCATTTGTTTTTGGACCATATCACGAAGCGAGAGATTGTAGTTTGTTTTCATGATTTGCGGGCCGTTTTTGATCTTCACGATAGATGATGTCCATCCCTATaa > 4:183284/1‑139 (MQ=255) cGTAAGCCGCTCCGTCTGTTTGCGGACTTACTGTCATTTGTTTTTGGACCATATCACGAAGCGAGAGATTGTAGTTTGTTTTCATGATTTGCGGGCCGTTTTTGATCTTCACGATAGatgatg > 4:361962/1‑123 (MQ=255) cGTAAGCCGCTCCGTCTGTTTGCGGACTTACTGTCATTTGTTTTTGGACCATATCACGAAGCGAGAGATTGTAGTTTGTTTTCATGATTTGCGGGCCGTTTTTGATCTTCACGATAGatgatg < 3:361962/123‑1 (MQ=255) gCCGCTCCGTCTGTTTGCGGACTTACTGTCATTTGTTTTTGGACCATATCACGAAGCGAGAGATTGTAGTTTGTTGTCATGATTTGCGGGCCGTGTTTGTTGGTGACGAGTGATGAGGTACCGCGGTATTATttttttt > 1:244554/1‑138 (MQ=255) ccGCTCCGTCTGTTTGCGGACTTACTGTCATTTGTTTTTGGACCATATCACGAAGCGAGAGATTGTAGTTTGTTTTCATGATTTGCGGGCCGTGTTTTGTGTTGACGGTAGTTGATGTGCATGCGGATTATtttttttt > 1:240539/1‑137 (MQ=255) cTCCGTCTGTTTGCGGACTTACTGTCATTTGTTTTTGGACCATATCACGAAGCGAGAGATTGTAGTTTGTTTTCATGATTTGCGGGCCGTGTTTTATGTTGACGCTAGATGATGTGCATCGGTTTAATTGTTTTAGCtt > 4:126055/1‑139 (MQ=255) cTCCGTCTGTTTGCGGACTTACTGTCATTTGTTTTTGGACCATAACACGAAGCGAGAGATTGTAGTTTGTTTTCATGATTTGCGGGCCGTTTTTTATATTAACGAGAGATTATGTCCATCCCGATAATtttttttgatt > 2:252148/1‑134 (MQ=255) tCCGTCTGTTTGCGGACTTACTGTCATTTGTTTTTGGACCATATCACGAAGCGAGAGATTGTAGTTTGTTTTCATGATTTGCGGGCCGTTTTTGTTGTTAACGATAGATGTTGTGCATGCGGATAATTGTTTTTGCt > 4:60102/1‑137 (MQ=255) tCCGTCTGTTTGCGGACTTACTGTCATTTGTTTTTGGACCATATCACGAAGCGAGAGATTGTAGTTTGTTTTCATGATTTGCGGGCCGTTTTTGATCtt > 8:229571/1‑99 (MQ=255) tCCGTCTGTTTGCGGACTTACTGTCATTTGTTTTTGGACCATATCACGAAGCGAGAGATTGTAGTTTGTTTTCATGATTTGCGGGCCGTTTTTGATCtt < 7:229571/99‑1 (MQ=255) cGGACTTACTGTCATTTGTTTTTGGACCATATCACGAAGCGAGAGATTGTAGTTTGTTTTCATGATTTGCGGGCCGTTTTTGATCTTCACGATAGATGATGTCCATCCGTATAATTGTTTTAGCTTCGTTGATGCCgca < 6:161312/139‑1 (MQ=255) ggACTTACTGTCATTTGTTTTTGGACCATATCACGAAGCGAGAGATTGTAGTTTGTTTTCATGATTTGCGGGCCGTTTTTGATCTTCACGATAGATGATGTCCATCCGTATAATTGTTTTAGCTTCGTTGATGCCgcag < 4:165768/139‑1 (MQ=255) ggACTTACTGTCATTTGTTTTTGGACCATATCACGAAGCGAGAGATTGTAGTTTGTTTTCATGATTTGCGGGCCGTTTTTGATCTTCACGATAGATGATGTCCATCCGTATAATTGTTTTAGCTTCGTTGATGCCgcag < 5:105944/139‑1 (MQ=255) gACTTACTGTCATTTGTTTTTGGACCATATCACGAAGCGAGAGATTGTAGTTTGTTTTCATGATTTGCGGGCCGTTTTTTATATTCACGATATATGATGTCCATCCGTATAATTGTTTTAGCTTCGTTGATTCCgcag > 5:349050/1‑138 (MQ=255) gACTTACTGTCATTTGTTTTTGGACCATATCACGAAGCGAGAGATTGTAGTTTGTTTTCATGATTTGCGGGCCGTGTTTTATCTTTACGAAATATGATGTCCCTCCGGATAATTGTTTTTTCTTAGTTTTTGCCgcccc > 6:199056/1‑136 (MQ=255) cTTACTGTCATTTGTTTTTGGACCATATCACGAAGCGAGAGATTGTAGTTTGTTTTCATGATTTGCGGGCCGTTTTTGATCTTCACGATAGATGATGTCCATCCGTATAATTGTTTTAGCTTCGTTGATGCCGcagcag < 1:275033/139‑1 (MQ=255) cTTACTGTCATTTGTTTTTGGACCATATCACGAAGCGAGAGATTGTAGTTTGTTTTCATGATTTGCGGGCCGTTTTTGATCTTCACGATAGATGATGTCCATCCGTATAATTGTTTTAGCTTCGTTGATGCCGcagcag < 1:263852/139‑1 (MQ=255) cTTACTGTCATTTGTTTTTGGACCATATCACGAAGCGAGAGATTGTAGTTTGTTTTCATGATTTGCGGGCCGTTTTTGATCTTCACGATAGATGATGTCCATCCGTATAATTGTTTTAGCTTCGTTGATGCCGcagcag < 8:300268/139‑1 (MQ=255) aCTGTCATTTGTTTTTGGACCATATCACGAAGCGAGAGATTGTAGTTTGTTTTCCTGATTTGCGGGCCGTGTTTGATCTTCACGATAGATGATGTCCATCCGTATAATTGTTTTAGCTTCGTTGATGCCGCAGCAGCt < 4:342203/138‑1 (MQ=255) aCTGTCATTTGTTTTTGGACCATATCACGAAGCGAGAGATTGTAGTTTGTTTTCATGATTTGCGGGCCGTGTTTGATCTTCACGATAGATGATGTCCATCCGTATAATTGTTTTAGCTTCGTTGATGCCGCAGCAGCt < 6:24553/138‑1 (MQ=255) aTTTGTTTTTGGACCATATCACGTAGCGAGAGATTGTAGTTTGTTTTCATGATTTGCGGGCCGTTTTTGATCTTCACGATAGATGATGTCCATCCGTATAATTGTTTTAGCTTCGTTGATGCCGCAGCAGCTGTATCAt < 2:272310/139‑1 (MQ=255) aTTTGTTTTTGGACCATATCACGAAGCGAGAGATTGTAGTTTGTTTTCATGATTTGCGGGCCGTTTTTGATCTTCACGATAga > 7:353027/1‑83 (MQ=255) aTTTGTTTTTGGACCATATCACGAAGCGAGAGATTGTAGTTTGTTTTCATGATTTGCGGGCCGTTTTTGATCTTCACGATAga < 8:353027/83‑1 (MQ=255) aTTTGTTTTTGGACCATATCACGAAGCGAGAGATTGTAGTTTGTTTTCATGATTTGCGGGCCGTTTTTGATCTTCACGATAGATGATGTCCATCCGTATAATTGTTTTAGCTTCGTTGATGCCGCAGCAGCTGTATCAt < 6:136407/139‑1 (MQ=255) aTTTGTTTTTGGACCATATCACGAAGCGAGAGATTGTAGTTTGTTTTCATGATTTGCGGGCCGTTTTTGATCTTCACGATAGATGATGTCCATCCGTATAATTGTTTTAGCTTCGTTGATGCCGCAGCAGCTGTATCAt < 3:203736/139‑1 (MQ=255) aTTTGTTTTTGGACCATATCACGAAGCGAGAGATTGTAGTTTGTTTTCATGATTTGCGGGCCGTTTTTGATCTTCACGATAGATGATGTCCATCCGTATAATTGTTTTAGCTTCGTTGATGCCGCAGCAGCTGTATCAt < 7:304020/139‑1 (MQ=255) aTTTGTTTTTGGACCATATCACGAAGCGAGAGATTGTAGTTTGTTTTCATGATTTGCGGGCCGTTTTTGAACTTCACGATATATGATGTCCATACGTTTAATTGTTTTAGCTTCGTTGATGGCGCAGCAGCTGTATCag > 1:13379/1‑138 (MQ=255) aTTTGTTTTTGGACCATATCACGAAGCGAGAGATTGTAGTTTGTTTTCATGATTTGCGGGCCGTGTTTTTTAGTGACGAAATATTATGTGCATCCGGATAATTTTTTTTTCTTGGTTTATGCCGCCGCACCTGTTTCag > 4:23183/1‑138 (MQ=255) aTTTGTGTTTGGACCATATCACGAAGCGAGAGATTGTAGTTTGTTTTCATGATTTGAGGGCCGTTTTTGATCTTCACGATAGATGATGTCCATCCGTATAATTGTTTTAGCTTCGTTGATGCCGCAGCAGCTGTATCAt < 2:332172/139‑1 (MQ=255) ttGTTTTTGGACCATATCACGAAGCGAGAGATTGTAGTTTGTTTTCATGATTTGCGGGCCGTTTTTGATCTTGACGATAGATGATGTCCATCCGGATAATTGTTTTATCTTCTTTGATGCCGCAGCAGCTGTATAAtt > 8:9580/1‑138 (MQ=255) tGTTTTTGGACCATATCACGAAGCGAGAGATTGTAGTTTGTTTTCATGATTTGCGGGCCGTTTTTGATCTTCACGATAGATGATGTCCATCCGTATAATTGTTTTAGCTTCGTTGATGCCGCAGCAGCTGTATCATTg < 7:228704/138‑1 (MQ=255) tttttGGACCATATCACGAAGCGAGAGATTGTAGTTTGTTTTCATGATTTGCGGGCCGTTTTTGATCTTCACGATAGATGATGTCCATCCGTATAATTGTTTTAGCTTCGTTGATGCCGCAGCAGCTGTATCATTGCCt < 6:17190/139‑1 (MQ=255) ccATATCACGAAGCGAGTGATTGTAGTTTGTTTTCATGATTTGCGGGCCGTTTTTGATCTTCACGATAGATGATGTCCATCCGTATAATTGTTTTAGCTTCGTTGATGCCGCAGCAGCTGTATCATTGCCTGTGAACTg < 1:323467/139‑1 (MQ=255) ccATATCACGAAGCGAGAGATTGTAGTTTGTTTTCATGATTTGCGGGCCGTTTTTGATCTTCACGATAGATGATGTCCATCCGTATAATTGTTTTAGCTTCGTTGATGCCGCAGCAGCTGTATCATTGCCTGTGAACTg < 1:229349/139‑1 (MQ=255) atatCACGAAGCGAGAGATTGTAGTTTGTTTTCATGATTTGCGGGCCGTTTTTGATCTTAACGATAGATGAAGTCCATCCGGATAATTGTTTTAGCTTCGTTTATTCCGCATTTGCTTTATCATTTCCTGTGAACTggt > 4:303674/1‑137 (MQ=255) aCGAAGCGAGAGATTGTAGTTTGTTTTCATGATTTGCGGGCCGTTTTTGATCTTCACGATAGATGATGTCCATCCGTATAATTGTTTTAGCTTCGTTGATGCCGCAGCAGCTGTATCATTGCCTGTGAACTGCTCAtt < 3:304024/138‑1 (MQ=255) cGAAGCGAGAGATTGTAGTTTGTTTTCATGATTTGCGGGCCGTTTTTGATCtt < 5:137748/53‑1 (MQ=255) cGAAGCGAGAGATTGTAGTTTGTTTTCATGATTTGCGGGCCGTTTTTGATCtt > 6:137748/1‑53 (MQ=255) aaGCGAGAGATTGTAGGTTGTTTTCATGATTTGCGGGCCGTTTTTGATCTTCACGATAGATGATGTCCATCCGTATAATTGTTTTAGCTTCGTTGATGCCGCAGCAGCTGTATCATTGCCTGTGAACTGCTCATTTACg < 5:222413/139‑1 (MQ=255) aGCGAGAGATTGTAGTTTGTTTTCATGATTTGCGGGCCGTTTTTGATCTTCACGATAGATGATGTCCATCCGTATAATTGTTTTAGCTTCGTTGATGCCGCAGCAGCTGTATCATTGCCTGTGAACTGCTCATTTACGc < 2:240539/139‑1 (MQ=255) aGCGAGAGATTGTAGTTTGTTTTCATGATTTGCGGGCCGTTTTTGATCTTCACGATAGATGATGTCCATCCGTATAATTGTTTTAGCTTCGTTGATGCCGCAGCAGCTGTATCATTGCCTGTGAACTGCTCATTTACGc < 5:199056/139‑1 (MQ=255) aGCGAGAGATTGTAGTTTGTTTTCATGATTTGCGGGCCGTTGTTGATCTTCACGATAGATGATGTCCATCCGTATAATTGTTTTAGCTTCGTTGATGCCGCAGCAGCTGTATCATTGCCTGTGAACTGCTCATTTACGc < 1:214166/139‑1 (MQ=255) cGAGAGATTGTAGTTTGTTTTCATGATTTGCGGGCCGTGTTTGATATTCACGATAGATGATGTACATCCGTATAATTTTTTTATCTTCGTTGATGCCGCAGCAGCTGTATCATTGCCTGTGAACTGCGAATTTACGCt > 4:304024/1‑138 (MQ=255) agagaTTGTAGTTTGTTTTCATGATTTGCGGGCCGTGTTTTTTCTTCACGATATATGATGTGCCTCCGTATAATTGTTTTTGCTTCGTTGATGCCGCCGCCGCTGTATGATTGCCGGTGTAATGCTCATTTACGCTGAt > 5:362041/1‑139 (MQ=255) gTAGTTTGTTTTCATGATTTGCGGGCCGTTTTTGATCTTCACGATAGATGATGTCCATCCGTATAATTGTTTTAGCTTCGTTGATGCCGCAGCAGCTGTATCATTGCCTGTGAACTGCTCATTTACGCTGATTTtata < 7:9580/138‑1 (MQ=255) gTAGTTTGTTATCATGATTTGCGGGCCGTTTTTGATCTTCACGATAGATGATGTCCATCCGTATAATTGTTTTAGCTTCGTTGATGCCGCAGCAGCTGTATCATTGCCTGTGAACTGCTCATTTACGCTGATTTtata < 5:30945/138‑1 (MQ=255) gTAGGTTGTTTTCATGATTTGCGGGCCGTTTTTGATCTTCACGATAGATGATGTCCATCCGTATAATTGTTTTAGCTTCGTTGATGCCGCAGCAGCTGTATCATTGCCTGTGAACTGCTCATTTACGCTGATTTtata < 3:143544/138‑1 (MQ=255) caGTTTGTTTTCATGATTTGCGGGCCGTTTTTGATCTTCACGATAGATGATGGCCATCCGTATAATTGTTTTAGCTTCGTTGATGCCGCAGCAGCTGTATCATTGCCTGTGAACTGCTCATTTACGCTGATTTTATaaa < 8:33230/138‑1 (MQ=255) cATGATTTGCGGGCCGTTTTTGATCTTCACGATAGATGATGTCCATCCGTATAATTGTTTTAGCTTCGTTGATGCCGCAGCAGCTGTATCATTGCCTGTGAACTGCTCATTTACGCTGATTTTATAAAGCGTATTGCt < 2:285093/138‑1 (MQ=255) aTGATTTGCGGGCCGTTTTTGATCTTCACGATAGATGATGTCCATCCGTATAATTGTTTTAGCTTCGTTGATGCCGCAGCAGCTGTATCATTGCCTGTGAACTGCTCATTTACGCTGATTTTATAAAGCGTATTGCttt < 2:275853/139‑1 (MQ=255) tGATTTGCTGGCCGTTTTTGATCTTCACGATAGATGATGTCCATCCGTATAATTGTTTTAGCTTCGTTGATGCCGCAGCAGCTGTATCATTGCCTGTGAACTGCTCATTTACGCTGATTTTATAAAGCGTATTGCtttt < 1:252148/139‑1 (MQ=255) aTTTGCGGGCCGTTTTTGATCTTCACGATAGATGATGTCCATCCGTATAATTGTTTTAGCTTCGTTGATGCCGCAGCAGCTGTATCATTGCCTGTGAACTGCTCATTTACGCTGATTTTATAAAGCGTATTGCTTTTCg < 6:213004/139‑1 (MQ=255) aTTTGCGGGCCGTTTTTGATCTTCACGATAGATGATGTCCATCCGTATAATTGTTTTAGCTTCGTTGATGCCGCAGCAGCTGTATCATTGCCTGTGAACTGCTCATTTACGCTGATTTTATAAAGCGTATTGCTTTTCg < 7:239798/139‑1 (MQ=255) cGGGCCGTTTTTGATCTTCACGATAGATGATGTCCATCCGTATAATTGTTTTAGCTTCGTTGATGCCGCAGCAGCTGTATCATTGCCTGTGAACTGCTCATTTACGCTGATTTTATAAAGCGTATTGCTTTTCGTTGta < 6:51256/139‑1 (MQ=255) cGTTTTTGATCTTCACGATAGATGATGTCCATCCGTATAATTGTTTTAGCTTCGTTGATGCCGCAGCAGCTGTATCATTGCCTGTGAACTGCTCATTTACGCTGATTTTATAAAGCGTATTGCTTTTCGTTGTATAGCt < 1:307532/139‑1 (MQ=255) cGTTTTTGATCTTCACGATAGATGATGTCCATCCGTATAATTGGTTTAGCTTCGGTGATGCCGCAGCAGCTGTATCATTGCCTGTGAACTGCTCATTTACGCTGATTTTATAAAGCGTATTGCTTTTCGTTGTATAGCt < 5:156431/139‑1 (MQ=255) cGTTTTTGATCTTCACGATAGATGATGTCCATACGTATAATTGTTTTAGCTTCGTTGATGCCGCAGCATCTGTATCATTGCCTGTGAACTGCTCATTTACGCTGATTTTATAAAGCGTATTGATTTTCGTTGTATAGCt < 8:303990/139‑1 (MQ=255) | AGTTGATGTTGCTGTATTAATGTACGTGAGCGATACGTAAGCCGCTCCGTCTGTTTGCGGACTTACTGTCATTTGTTTTTGGACCATATCACGAAGCGAGAGATTGTAGTTTGTTTTCATGATTTGCGGGCCGTTTTTGATCTTCACGATAGATGATGTCCATCCGTATAATTGTTTTAGCTTCGTTGATGCCGCAGCAGCTGTATCATTGCCTGTGAACTGCTCATTTACGCTGATTTTATAAAGCGTATTGCTTTTCGTTGTATAGCT > CP006881/3503421‑3503690 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |