Predicted mutation
evidence seq id position mutation annotation gene description
RA CP006881 3,723,505 C→T L107L (CTG→TTG)  U712_19195 → putative transporter ywcJ

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0068813,723,5050CT100.0% 114.2 / NA 35L107L (CTG→TTG) U712_19195putative transporter ywcJ
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (18/17);  total (18/17)

TCCGGCAGCCGCTGTCACATTCGGGGCCGCTATTCTGCTGATTGCTTACGGAGGCGGAGATTTATTTACTGGCAACACTTTTTATTTCACTTATACCGCGCTCCGAAAAAAAATTCGCTGGCGAGACACCCTGTACCTGTGGATGTCAAGCTATGCCGGCAATTTGATCGGCGCCATTCTATTTGCCATTCTGATCAGCGCGACAGGGCTTTTTGAGGAGGCTTCTGTTCATTCCTTTTTGATTCATCTGGCA  >  CP006881/3723369‑3723621
                                                                                                                                        |                                                                                                                    
tCCGGCAGCCGCTGTCACTTTCGGGGCCGCTTTTATGATGATTGCTTACGGAGGCGGAGATTTATTTTCCGGCAACACCATTTATTTAACCAATACCCCGCGCCGGAAAAAAATAAGCAGGAGCGCCACCCTATACTtg                                                                                                                    >  3:83211/1‑139 (MQ=255)
tCCGGCAGCCGCTGTCACTTTCGGGGCCGCTATTCTGATGATTGCTTACGGAGGCGGAGATTTATTTACCGGCAACACCTTTTATTTCACCTATACCGCGCTCCGGAAAAAAATCAGCTGGCGCGACACCCTATACTtg                                                                                                                    >  7:246185/1‑139 (MQ=255)
  cGGCAGCCGCTGTCACTTTCGGGGCCGCTATTCTGATGATTGCTTACGGAGGCGGAGATTTATTTACCGGCAACACCTTTTATTTCACCTATACCGCGCTCCGGAAAAAAATCAGCTGGCGCGACACCCTATACTtgtg                                                                                                                  <  4:75506/139‑1 (MQ=255)
                    tCGGGGCCGCTATTCTGATGATTGCTTACGGAGGCGGAGATTTATTTACCGGCAACACCTTTTATTTCACCTATTCAGCGATCCGGAAAAAAATCAGCTGGCGCGACACCCTATACTTGTGGATGTCAAGCTTTgac                                                                                                  <  4:287509/137‑3 (MQ=255)
                    tCGGGGCCGCTATTCTGATGATTGCTTACGGAGGCGGAGATTTATTTACCGGCAACACCTTTTATTTCACCTATACCGCGCTCCGGAAAAAAATCAGCTGGCGCGACACCCTATACTTGTGGATGTCAAGCTATGCCg                                                                                                 <  6:104715/138‑1 (MQ=255)
                                        aTTGCTTACGGAGGCGGAGATTTATTTACCGGCAACACCTTTTATTTCACCTATACCGCGCTCCGGAAAAAAATCAGCTGGCGCGACACCCTATACTTGTGGATGTCAAGCTATGCCg                                                                                                 >  1:151603/1‑118 (MQ=255)
                                        aTTGCTTACGGAGGCGGAGATTTATTTACCGGCAACACCTTTTATTTCACCTATACCGCGCTCCGGAAAAAAATCAGCTGGCGCGACACCCTATACTTGTGGATGTCAAGCTATGCCg                                                                                                 <  2:151603/118‑1 (MQ=255)
                                          ttcTTACGGAGGCGGAGATTTATTTACCGGCAACACCTTTTATTTCACCTATACCTCGCTCCGGAAAAAAATCAGCTGGCGCGACACCCTATACTTGTGGATGTCAAGCTATGCCGGCAATTTAATCTGCGCCATTCtg                                                                          >  1:58026/3‑138 (MQ=255)
                                          tGCTTACGGAGTCGGAGATTTATTTACCGGCAACACCTTTTATTTCACCTATACCGCGCTCCGGAAAAAAATCAGCTGGCGCGACACCCTATACTTGTGGATGTCAAGCTATGCCGGCAATTTAATCGGCGCCATTCt                                                                           <  2:58026/138‑1 (MQ=255)
                                          tGCTTACGGAGGCGGAGATTTATTTACCGGCAACACCTTTTATTTCACCTATACCGCGCTCCGGAAAAAAATCAGCTGGCGCGCCACCCTATACTTGTGGATGTCAAGCTATGCCGGCAATTTAATCGGCGCCAttatt                                                                          >  1:276784/1‑136 (MQ=255)
                                               aCGGAGGCGGAGATTTATTTACCGGCAACACCTTTTATTTCACCTATACCGCGCTCCGGAAAAAAATCGGCTGGCGCGACACCCTATACTTGTGGATGTCAAGCTATGcc                                                                                                  >  6:292630/1‑110 (MQ=255)
                                               aCGGAGGCGGAGATTTATTTACCGGCAACACCTTTTATTTCACCTATACCGCGCTCCGGAAAAAAATCGGCTGGCGCGACACCCTATACTTGTGGATGTCAAGCTATGcc                                                                                                  <  5:292630/110‑1 (MQ=255)
                                               aCGGAGGCGGAGATTTATTTACCGGCAACACCTTTTATTTCACCTATACCGCGCTCCGGAAAAAAATCAGCTGGCGCGACACCCTATACTTGTGGATGTCAAGCTATGCCGGCAATTTAATCGGCGCCATTCTGTTTg                                                                      <  8:246185/138‑1 (MQ=255)
                                               aCGGAGGCGGAGATTTATTTACCGGCAACACCTTTTATTTCACCTATACCGCGCTCCGGAAAAAAATCAGCTGGCGCGACACCCTATACTTGTGGATGTCAAGCTATGCCGGCAATTTAATCGGCGCCATTCTGTTTg                                                                      <  6:161842/138‑1 (MQ=255)
                                                                tataCCGGCAACACCTTTTATTTCACATATACCGCGCTCCGGAAAAAAATCAGCTGGCGCGACACCCTATACTTGTGGATGTCAAGCTATGCCGGCAATTTAATCGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGa                                                    >  5:115874/3‑139 (MQ=255)
                                                                       gCAACACCTTTTATTTCACCTATACCGCGCTCCGGAAAAAAATCAGCTGGCGCGCCACCCTATACTTGTGGATGTCAAGCTATGCCGGCAATTTAATCGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGACGGGACt                                             >  2:5069/1‑139 (MQ=255)
                                                                       gCAACACCTTTTATTTCACCTATACCGCGCTCCGGAAAAAAATCAGCTGGCGCGACACCCTATACTTGTGGATGTCAAGCTATGCCGGCAATTTAATCGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGACGGGACt                                             >  7:286467/1‑139 (MQ=255)
                                                                       gCAACACCTTTTATTTCACCTATACCGCGCTCCGGAAAAAAATCAGCTGGCGCGACACCCTATACTTGTGGATGTCAAGCTATGCCGGCAATTTAATCGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGACGGGACt                                             >  3:259469/1‑139 (MQ=255)
                                                                              cttttATTTCACCTATACCGCGCTCCGGAAAAAAATCAGCTGGCGCGACACCCTATACTTGTGGATGTCAAGCTATGCCTGCAATTTAATCGGCGCCATTCTTTTTGCCATCCTTATCAGCGCGACGGTACTTTTTgag                                      <  7:293372/138‑1 (MQ=255)
                                                                              cttttATTTCACCTAAACCGCGATCGGTAAAAAAATCTGCGGGCGCTACACCCTATCCTTGTGGATGTCAAGCTATGCCGGCAATTTACTCGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGACGGGACTTTTTgag                                      <  2:276784/138‑1 (MQ=255)
                                                                              cttttAATTCACCTATCCCGCGCTCCGGAAAAAAATCAGCTGGCGCGACACCCTATACTTGTGGATGTCAAGCTATGCCGGCAATTTAATCGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGACGGGACTTTTTgag                                      <  7:282270/138‑1 (MQ=255)
                                                                                 ttATTTCACCTATACCGCGCTCCGGAAAAAAATCAGCTTGCGCGACACCCTATACTTGTGGATGTCAAGCTATGCCGGCAATTTAATCGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGACGGGACTTTTTgagga                                    <  6:115874/138‑1 (MQ=255)
                                                                                        acctataCCGCGCTCCGGAAAAAAATCAGCTGGCGCGACACCCTATACTTGTGGATGTCAAGCTATGCCGGCAATTTAATCGGCGCCATTCTGTTTg                                                                      <  2:129598/94‑1 (MQ=255)
                                                                                        acctataCCGCGCTCCGGAAAAAAATCAGCTGGCGCGACACCCTATACTTGTGGATGTCAAGCTATGCCGGCAATTTAATCGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTg                            >  2:60556/4‑139 (MQ=255)
                                                                                        acctataCCGCGCACCGGAAAAAAATCAGCTGGCGCGACACCCTATACTTGTGGATGTCAAGCTATGCCGGCAATTTAATCGGCGCCATTCTGTTTg                                                                      >  1:129598/4‑97 (MQ=255)
                                                                                             taCCGCGCTCCGGTAAAAACTCAGCTGGCGCGACACCCTATACTTGTGGAGGTCAAGCTATGCCGGCAATTTAATCGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCa                        <  8:267889/138‑1 (MQ=255)
                                                                                                  cgcTCCGGAAAAAATTCAGCTGGCGCGACACCCTATACTTGTGGATGTCAAGCTATGCCGGCAATTTAATCGGCGCCATTCTGTTTGcc                                                                    <  4:6452/89‑1 (MQ=255)
                                                                                                  cgcTCCGGAAAAAAATCAGCTGGCGCGCCACACTATACTTGTGGATGTCAAGCTATGCCGGCAATTTAATCGGCGCGATTCTGTTTGCCATCCTGATGAGCGCGACGGGAGTTTTTGAGGAGCCTTCTGTTGATTCCtt                  >  4:139241/1‑139 (MQ=255)
                                                                                                  cgcTCCGGAAAAAAATCAGCTGGCGCGACACCCTATACTTGTGGATGTCAAGCTATGCCGGCAATTTAATCGGCGCCATTCTGTTTGcc                                                                    >  3:6452/1‑89 (MQ=255)
                                                                                                  cgcTCCGGAAAAAAATCAGCTGGCGCGACACCCTATACTTGTGGATGTCAAGCTATGCCGGCAATTTAATCGGCGCCATTCTGTTTGCCATCCTGCTCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCTTTCCtt                  >  5:284303/1‑139 (MQ=255)
                                                                                                  cgcTCCGGAAAAAAATCAGCTGGCGCGACACCCTATACTTGTGGATGTCAAGCTATGCCGGCAATTTAATCGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGACGGGACttttt                                         <  3:31503/116‑1 (MQ=255)
                                                                                                  cgcTCCGGAAAAAAATCAGCTGGCGCGACACCCTATACTTGTGGATGTCAAGCTATGCCGGCAATTTAATCGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGACGGGACttttt                                         >  4:31503/1‑116 (MQ=255)
                                                                                                  cgcTCCGGAAAAAAATCAGCTGGCGCGACACCCTATACTTGTGGATGTCAAGCTATGCCGGCAATTTAATCGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCtt                  >  3:147137/1‑139 (MQ=255)
                                                                                                  cgcTCCGGAAAAAAATCAGCTGGCGCGACACCCTATACTTGTGGATGTCAAGCTATGCCGGCAATTTAATCGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCtt                  >  8:93924/1‑139 (MQ=255)
                                                                                                                  cagCTGGCGCGACACCCTATACTTGTGGATGTCAAGCTATGCCGGCAATTTAATCGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCa  <  4:259469/137‑1 (MQ=255)
                                                                                                                                        |                                                                                                                    
TCCGGCAGCCGCTGTCACATTCGGGGCCGCTATTCTGCTGATTGCTTACGGAGGCGGAGATTTATTTACTGGCAACACTTTTTATTTCACTTATACCGCGCTCCGAAAAAAAATTCGCTGGCGAGACACCCTGTACCTGTGGATGTCAAGCTATGCCGGCAATTTGATCGGCGCCATTCTATTTGCCATTCTGATCAGCGCGACAGGGCTTTTTGAGGAGGCTTCTGTTCATTCCTTTTTGATTCATCTGGCA  >  CP006881/3723369‑3723621

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑