Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP006881	2,054,382	A→C	intergenic (+60/‑41)	U712_10180 → / → U712_10185	Putative aldehyde dehydrogenase dhaS/Squalene‑‑hopene cyclase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP006881	2,054,382	0	A	C	100.0%	247.7 / NA	66	intergenic (+60/‑41)	U712_10180/U712_10185	Putative aldehyde dehydrogenase dhaS/Squalene‑‑hopene cyclase
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base C (31/35);  total (31/35)

GGACGAGAAATGGGATCATATGCCTTGGATAATTACACAGAAGTCAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTAAAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTGATGGGCACACTTCAGGAGAAAGTGAGGCGTTTTCAAAAGAAAACCATTACCGAGTTAAGAGACAGGCAAAATGCTGATGGTTCATGGACATT  >  CP006881/2054248‑2054514                                                                                                                                       |                                                                                                                                     ggACGAGAAATGGGATCATATGCCTTGGATAATTACACAGAAGTCAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTacaa                                                                                                                                    <  6:134233/137‑1 (MQ=255)  gACGAGAAATGGGATCATATGCCTTGGATAATTACACAGAAGTCAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAgcc                                                                                                                                 >  8:114744/1‑137 (MQ=255)  gACGAGAAATGGGATCATATGCCTTGGATAATTACACAGAAGTCAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGAc                                                                                                                                 >  3:279638/1‑139 (MQ=255)   aCGAGATATGGGATCATATGCCTTGGATTATTACACAGAAGTCAAAAGTGTATGGGTAAAACTTGAAGTCTTACATGTATGTTTAAAAAACTGATGCCTGGCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACg                                                                                                                                <  3:281234/139‑1 (MQ=255)   aCGAGAAATGGGATCATATGCCTTGGATAATTACACAGAAGTCAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACg                                                                                                                                <  1:241215/139‑1 (MQ=255)     gagaAATTGGATCATATGCCTTCGATAATTACACAGAAGTCAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCt                                                                                                                              <  5:229378/139‑1 (MQ=255)     gagaAATGGGATCATATGCCTTGGATAATTACACAGAAGTCAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCt                                                                                                                              <  4:108260/139‑1 (MQ=255)      agaAATGGGATCATATGCCTTGGATAATTACACAGAAGTCAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCt                                                                                                                              >  1:192598/1‑138 (MQ=255)      agaAATGGGATCATATGCCTTGGATAATTACACAGAAGTCAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTg                                                                                                                             <  7:108512/139‑1 (MQ=255)      agaAATGGGATCATATGCCTTGGATAATTACACAGAAGTCAAAAGTGTATAGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTg                                                                                                                             <  2:123195/139‑1 (MQ=255)              gATCATATGCCTTGGATAATTACACAGAAGTCAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAatatata                                                                                                                     <  2:243891/139‑1 (MQ=255)                tCATATGCCTTGGATAATTACACAGAAGTCAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATg                                                                                                                   <  6:162760/139‑1 (MQ=255)                tCATATGCCTTGGATAATTACACAGAAGTCAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATg                                                                                                                   <  6:273957/139‑1 (MQ=255)                  atatGCCTTGGATAATTACACAGAAGTCAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCt                                                                                                                 >  5:201575/1‑139 (MQ=255)                  atatGCCTTGGATAATTACACAGAAGTCAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCt                                                                                                                 >  2:34838/1‑139 (MQ=255)                        cTTGGATAATTACACAGAAGTCAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGaa                                                                                                           <  6:201575/139‑1 (MQ=255)                            gATAATTACACAGAAGTCAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAAGGa                                                                                                        <  2:198433/138‑1 (MQ=255)                            gATAATTACACAGAAGTCAAAAGTGTATGGGTAAACCATGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGCCACTACAAGACGCTGAATATATATGCTTCTGAAGTAg                                                                                                       >  6:84210/1‑139 (MQ=255)                                aTTACACAGAAGTCAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGa                                                                                                   <  1:34838/139‑1 (MQ=255)                                 ttACACAGAAGTCAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTg                                                                                                                             <  3:156445/112‑1 (MQ=255)                                 ttACACAGAAGTCAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTg                                                                                                                             >  4:156445/1‑112 (MQ=255)                                 ttACACAGAAGTCAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTCCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGCCGCTGAATATATATGGTTCTGAAGGAGTTGAg                                                                                                  >  7:154007/1‑139 (MQ=255)                                   acacAGAAGTCAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGc                                                                                                 <  6:285401/138‑1 (MQ=255)                                      caGAAGTCAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTg                                                                                                             <  6:295585/123‑1 (MQ=255)                                      caGAAGTCAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTg                                                                                                             >  5:295585/1‑123 (MQ=255)                                      caGAAGTCAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCAGCCAGCAGTGTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTACAGAAGGAGTTGAGCGTGa                                                                                             >  2:45986/1‑139 (MQ=255)                                       aGAAGTCAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTGAt                                                                                            >  8:94426/1‑139 (MQ=255)                                         aaGTCAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTGATgg                                                                                          >  4:13727/1‑139 (MQ=255)                                          aGTCAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTGATggg                                                                                         <  8:60145/139‑1 (MQ=255)                                           gTCAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTGATggg                                                                                         >  8:156074/1‑138 (MQ=255)                                            tCAAAAGTTTATGGGTAAACCTTGAAGACTAACATGTATGGTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTGATGGGca                                                                                       <  4:74430/139‑1 (MQ=255)                                            tCAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTGTGAAGGAGTTGAGCGTGATGGGca                                                                                       <  5:84210/139‑1 (MQ=255)                                             cAAAATTGTATGTTTAAACATTGAAGAATAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTATGTAATGGCAGTACAATACGCTGAATATATATGCTTATGAATGAGTTGATCGTGATGGGca                                                                                       <  2:260762/138‑1 (MQ=255)                                             cAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGTAGGAGTTGAGCGTGATGGGca                                                                                       <  4:230558/138‑1 (MQ=255)                                                     tATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAatatata                                                                                                                     <  7:79447/100‑1 (MQ=255)                                                     tATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAatatata                                                                                                                     >  8:79447/1‑100 (MQ=255)                                                     tATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTGATGGGCACACTTCAg                                                                               >  5:292444/1‑138 (MQ=255)                                                        gggTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTGATggg                                                                                         >  7:46834/1‑125 (MQ=255)                                                        gggTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTGATggg                                                                                         <  8:46834/125‑1 (MQ=255)                                                        gggTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTGATGGGCACACTTCAGgag                                                                            <  8:215103/138‑1 (MQ=255)                                                          gTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTGATGGGCACACTTCAGgaga                                                                           >  2:212395/1‑137 (MQ=255)                                                             aaCCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTGATGGGCACACTTCAGGAGAAAGt                                                                       >  1:97759/1‑138 (MQ=255)                                                                    aaGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTGATGGGCACACTTCAGGAGAAAGTGAGGCGtt                                                               >  6:172041/1‑139 (MQ=255)                                                                    aaGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTGATGGGCACACTTCAGGAGAAAGTGAGGCGtt                                                               >  5:273446/1‑139 (MQ=255)                                                                         tAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTg                                                                                              >  4:207188/1‑103 (MQ=255)                                                                         tAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTg                                                                                              <  3:207188/103‑1 (MQ=255)                                                                         tAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTGATGGGCACACTTCAGGAGAAAGTGAGGCGTTTTCa                                                           >  5:68180/1‑138 (MQ=255)                                                                              tgtatgtTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTGATGGGCACACTTCAGGAGAAAGTGAGGCGTTTTCAAAAGaa                                                     <  7:94426/139‑1 (MQ=255)                                                                                tatgtTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTg                                                                                                                             >  1:260940/1‑65 (MQ=255)                                                                                tatgtTTAAAAAACTGCTGCCTGCAAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTg                                                                                                                             <  2:260940/65‑1 (MQ=255)                                                                                 atgtTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTGATGGGCACACTTCAGGAGAAAGTGAGGCGTTTTCAAAAGAAAAc                                                  >  3:18638/1‑139 (MQ=255)                                                                                  tgtTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTGATGGGCACACTTCAGGAGAAAGTGAGGCGTTTTCAAAAGAAAAc                                                  >  5:13568/1‑138 (MQ=255)                                                                                   gtTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTGATGGGCACACTTCAGGAGAAAGTGAGGCGTTTTCAAAAGAAAACCa                                                >  5:41953/1‑139 (MQ=255)                                                                                     ttAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTGATGGGCACACTTCAGGAGAAAGTGAGGCGTTTTCAAAAGAAAACCAt                                               >  5:176958/1‑138 (MQ=255)                                                                                       aaaaaaCTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTGATGGGCACACTTCAGGAGAAAGTGAGGCGTTTTCAAAAGAAAACCATTAc                                            >  5:91738/1‑139 (MQ=255)                                                                                        aaaaaCTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTGATGGGCACACTTCAGGAGAAAGTGAGGCGTTTTCAAAAGAAAACCATTAcc                                           <  5:196038/139‑1 (MQ=255)                                                                                        aaaaaCTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTGATGGGCACACTTCAGGAGAAAGTGAGGCGTTTTCAAAAGAAAACCATTAc                                            <  6:273446/138‑1 (MQ=255)                                                                                        aaaaaCTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTGATGGGCACACTTCAGGAGAAAGTGAGGCGTTTTCAAAAGAAAACCATTAc                                            <  6:68180/138‑1 (MQ=255)                                                                                             ctgctgCCTGCCAGCAGTTTTTTTCTTTCTGTAATGCCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTGATGGGCACACTTCAGGAGAAAGTGAGGCGTTTTCAAAAGAAAACCATTACCGAGtt                                      <  6:91738/139‑1 (MQ=255)                                                                                              tgctgcCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTGATGGGCACACTTCAGGAGAAAGTGAGGCGTTTTCAAAAGAAAACCATTACCGAGtt                                      >  6:237983/1‑138 (MQ=255)                                                                                                   cctgccAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTGATGGGCACACTTCAGGAGAAAGTGAGGCGTTTTCAAAAGAAAACCATTACCGAGTTAAgaga                                <  2:192598/139‑1 (MQ=255)                                                                                                    ctgccAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTGATGGGCACACTTCAGGAGAAAGTGAGGCGTTTTCAAAAGAAAACCATTACCGAGTTAAGAGAc                               <  5:131827/139‑1 (MQ=255)                                                                                                                  tttttttcTGTAATTGCAGTACAAGACGCTGAATATATATGCTTGTGATGGAGTTGAGCTTGATGGGCACACTTCAGGAGAAAGTGAGTCGTTTTCAAAAGAAAACCATTACCGAGTTAATAGACAGGCAAAATGCTg                  <  5:172041/138‑1 (MQ=255)                                                                                                                        tctGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTGATGGGCACACTTCAGGAGAAAGTGAGGCGTTTTCAAAAGAAAACCATTACCGAGTTAAGAGACAGTCAAAATGCTGATGGtt            >  5:267282/1‑138 (MQ=255)                                                                                                                            tAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTGATGGGCACACTTCAGGAGAAAGTGAGGCGTTTTCAAAAGAAAACCATTACCGAGTTAAGAGACAGGCAAAATGCTGATGGTTCAt         <  3:212655/137‑1 (MQ=255)                                                                                                                            tAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTGATGGGCACACTTCAGGAGAAAGTGAGGCGTTTTCAAAAGAAAACCATTACCGAGTTAAGAGACAGGCAAAATGCTGATGGTTCAt         <  6:176958/137‑1 (MQ=255)                                                                                                                                 gCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTGATGGGCACACTTCAGGAGAAAGTGAGGCGTTTTCAAAAGAAAACCATTACCGAGTTAAGAGACAGGCAAAATGCTGATGGTTCATGGACAtt  >  5:205591/1‑139 (MQ=255)                                                                                                                                       |                                                                                                                                     GGACGAGAAATGGGATCATATGCCTTGGATAATTACACAGAAGTCAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTAAAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTGATGGGCACACTTCAGGAGAAAGTGAGGCGTTTTCAAAAGAAAACCATTACCGAGTTAAGAGACAGGCAAAATGCTGATGGTTCATGGACATT  >  CP006881/2054248‑2054514

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑