| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | Exported | 5,302 | A→C | 5.7% | intergenic (+571/‑586) | ampR → / → lacZalpha | /vntifkey=4//vntifkey=4 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | Exported | 5,302 | 0 | A | C | 5.7% | 12984.8 / 144.1 | 4845 | intergenic (+571/‑586) | ampR/lacZalpha | /vntifkey=4//vntifkey=4 |
| Reads supporting (aligned to +/- strand): ref base A (2660/1789); new base C (24/349); total (2686/2159) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 0.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 5014 total aligned reads displayed.
TACCGGGTTGGACTCAAGACGATAGTTACCGGATAAGGCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCACACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCGGGTTTCGCCACCTCTGACTT > Exported/5166‑5442 | ccGGGTTGGACTCAAGACGATAGTAACCGGATAAGGCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCACACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAgcgc > 3:327819/1‑139 (MQ=255) ccGGGTTGGACGCAAGACGATAGTTACCGGATAAGGCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCACACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAgcgc < 4:180232/139‑1 (MQ=255) ttGGACTCAAGACGATAGTTACCGGATAAGGCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCACACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGTGCCACGc > 1:331994/1‑139 (MQ=255) ttGGACTCAAGACGATAGTTACCGGATAAGGCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCACACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGc > 8:26194/1‑139 (MQ=255) ttGGACTCAAGACGATAGTTACCGGATAAGGCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCACACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGc > 4:369963/1‑139 (MQ=255) tAGTTACCGGATAAGGCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCACACAGCCCAGCTTGGAGCGAACGACCTACCCCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGgaga > 3:9486/1‑138 (MQ=255) ttACCGGATAAGGCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCACACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCCCGCTTCCCGAAGGGAGAAAgg > 8:55302/1‑139 (MQ=255) aCCGGATAAGGCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCACACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCg > 3:100483/1‑139 (MQ=255) cGGATTAGGCGCAGCGGGCGGGCTGAACGGGGGGTTCGTGCACACAGCCCAGCTTGGAGAGAACGACCTACACCGAACTGAGATCACTACTGCGTGAGCTATGAGAAAGCGGCACGCTTCCCGAAGGGAGAAAGGCGGa < 3:372749/139‑1 (MQ=255) cGGATCAGGCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCACACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGa < 1:100437/139‑1 (MQ=255) gcaTACGGCGCCGCGGTCGGGCTGAACGGGGGGTTCGTGCACACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGGGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGAc < 5:70481/137‑1 (MQ=255) gATAAGGCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCACACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACa < 1:278806/139‑1 (MQ=255) ggCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCACACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTAt > 2:180660/1‑139 (MQ=255) cGGTCGGGCTGAACGGGGGGTTCGTGCACACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGt > 6:269404/1‑137 (MQ=255) gtgCTGAACGGGGGTGTCTTTCACACAGCACAGCTTGGAGCGAACGACCTACACCTAAATGATATACCTACAGCGTGAGCTATGATAAAGCGCAACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGc < 5:187417/137‑1 (MQ=255) ggggTGACCGGGGGGGGCGTGCACACAGCCCAGCTGGGAGCTAACGACCTACACCGAACTGATATACCTACCGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGc < 4:161941/139‑1 (MQ=255) tcagggggggTGCGTGCACACAGCCCAGCTTGGAGCGAACGACCAAACCCGAACTGAGAACCCTACCGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGt < 6:193402/135‑1 (MQ=255) taagggggggTGCGTGCACACAGCCCAGCTTGGAGCGAACTACCTACACCGAACTGATATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGTACAGGTATCCGGTAAGCGGCAGGGt < 4:142418/135‑1 (MQ=255) gaccGGGGGGTTCGTGCACACAGCCCAGCTGGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGt < 8:238195/136‑1 (MQ=255) gAAGGGGGGGTGCGCGCACACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGGGAGCTATGCGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGGCAGGTATCCGGTAAGCGGCAGGGt < 6:323751/139‑1 (MQ=255) gAACGGGGGGTTCGTGCACACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGt < 4:120080/139‑1 (MQ=255) gAACGGGGGGTTCGCGCACACCGCCCAGCTGGGAGCTAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGt < 1:136772/139‑1 (MQ=255) gAACGGGGGGTCCGGGCCCCCAGCCCCGCTTGGACCGAACGACCTAAACCGACCGGCCACACCTACCGCGGCCCCTATGACAACCCGCCACGCTTCCCGCAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGt < 2:239131/139‑1 (MQ=255) gAACGGGGCGTGCGTGCACACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGGTATTAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGt < 4:347325/139‑1 (MQ=255) aaCGGGGGGTTCGTGCACACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGt < 3:169850/138‑1 (MQ=255) aaCGGGGGGTGCGTGCACACAGCCCAGCTTTGAGCGAACGACCTACTCCGAACTGAGATACCTACAGCGTGAGCTATGAGAACGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTTTCCGGTAAGCGGCAGGGt < 1:200347/138‑1 (MQ=255) cGGGGGGTTCGTGCACACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGc < 5:324639/131‑1 (MQ=255) cGGGGGGTTCGAGCACACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAg > 6:301489/1‑107 (MQ=255) gggggTTCGTGCACACAGCCCAGGTTGGAGCTAACGACCTACACCGAACTGAGATACCTCCCGCGGTAGCTATGAGACCGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGaa < 1:366954/139‑1 (MQ=255) gggggTGCGGGCACACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTCAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGaa < 2:265179/139‑1 (MQ=255) gggTTCGTGCACACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGa > 7:356893/1‑108 (MQ=255) ttCGTGCACACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGga < 5:145121/139‑1 (MQ=255) tgcggccacacaGCCCAGCTGGGCGCTAACTACCAACACCCAACTGAGATACCTACAGCGTGAGCTATGAGAACGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCGGGTAAGCGGCAGGGTCGGAACAGga < 4:99579/133‑1 (MQ=255) tgcGTGCACACAGCCCAGCTGGGAGCGAACGACCTACACCGAACTGACAAACCTACAGCGTGAGCTATGAGAACGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGga < 7:324778/137‑1 (MQ=255) cccGTGCACACCGCCCCGCGTGGAGCCAACGCCCTACACCCAACTGACATACCTACCGCGGGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGga < 1:226332/137‑1 (MQ=255) gCACACCGCCCTGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAgcg < 5:167665/139‑1 (MQ=255) ccaGCCCAGCTTGGCCCCAACGACCTACACCTAATGCAGATCCCTACCGCGTGATCTATGAGAAAGCGCCACGCTTACCGAAGGTAGAAAGGCGTACAGGTATCCGGTAAGCGGCAGGGGCGGAACAGGAGAGCGCACg < 6:169180/138‑1 (MQ=255) caGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGaa < 7:152512/88‑1 (MQ=255) gCCCAGCTTGGAGCTAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAgg < 7:185908/139‑1 (MQ=255) ccccGCTTGGAGCGCACGACCTACACCGAACTGAGATACCTACAGCGTGCGGTATGAGACAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGCCAGGTATCCGGTAAGCGGCAGGGGCGGAACAGGAGAGCGCTCGAggg > 8:287618/1‑139 (MQ=255) cccAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGc < 5:350565/111‑1 (MQ=255) cccAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGt < 8:118843/116‑1 (MQ=255) cccAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGATCAGGAGAGCGCACGAggg > 6:128940/1‑139 (MQ=255) ggAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCa > 4:249911/1‑59 (MQ=255) ggAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGaa < 7:246576/77‑1 (MQ=255) gAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGt > 7:95612/1‑107 (MQ=255) agagcaCGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAACGGCGGACAGGTATCCGGTACGCGGCAGGGTCTGAACAGGAGAGCGCACGAGGGAGCTTCCAgg > 2:141438/6‑139 (MQ=255) aGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGa > 8:222701/1‑82 (MQ=255) aGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGc > 2:207857/1‑101 (MQ=255) aGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAgg > 4:67533/1‑139 (MQ=255) aGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAgg > 3:152653/1‑139 (MQ=255) aGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAG‑AAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAggg > 6:6892/1‑139 (MQ=255) caCGACCTACACCGAACTGAGATACATACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCTCACGAGGGAGCTTCCAggggg > 7:43837/2‑138 (MQ=255) aaCGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAggggg > 3:188848/1‑138 (MQ=255) aCGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGac > 2:73696/1‑138 (MQ=255) accacCGACCTGCTATACCTACAGGGTGGGATAGGACACCCGGCCCCGCTTCCCGACGGGAGAATGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGATAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCt < 4:217054/137‑1 (MQ=255) cacCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTACGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTgg < 7:272968/139‑1 (MQ=255) cacCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTgg < 8:7944/139‑1 (MQ=255) cacCGAACTGAGATACCTACAGCGTGAGCTATGACAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCt < 5:258349/137‑1 (MQ=255) cccGAACTCACCTACCTACCCCGCGAGCTATCACAAAGCGCCACGCTTCCCGCAGGGAGAAAGGCGGACAGGTACCCGGTAAGCGTCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGt < 5:373883/138‑1 (MQ=255) gcaaCTGAGATACCTACAGCGTGTTGTTTGACAAAGCGCCACGCTTCCCGACGGGAGAACGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGt < 3:222222/135‑1 (MQ=255) aaCTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGaa > 8:200804/1‑93 (MQ=255) aaCTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGga < 2:291997/98‑1 (MQ=255) aaCTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGACACGCCTGGTAGCt > 6:231969/1‑139 (MQ=255) aaCTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCt > 1:168219/1‑139 (MQ=255) aaCTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAAGGTCGGAACAGGAGAGCGCACTAGTGAGCTTCCAGGGGGAAACGCCTGGTATCt > 3:27464/1‑139 (MQ=255) aaCTGAGATACCTACAGCGTGAGCTATGAGAAAGCGACACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGGAAGCGGCAGGCTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGTGGGAAACGCCTGGTATCt > 7:228822/1‑139 (MQ=255) aCTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCtt > 8:336767/1‑139 (MQ=255) aCTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCtt > 3:68498/1‑139 (MQ=255) aCTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCtt > 8:17710/1‑139 (MQ=255) attaaCCTACTGCGTGAGATAGTTCAACGGGCCACGCTTCCCGAAGGGAGAACGGCGGACATGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCCTCCAGGGGGAAACGCCTGGTATCTTta < 6:369758/133‑1 (MQ=255) agaTACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAggg > 1:51576/1‑106 (MQ=255) agaTACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAACCGCCTGGTATCTTta > 5:124655/1‑137 (MQ=255) agaTACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGt < 5:294323/130‑1 (MQ=255) agaTACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTta > 3:246563/1‑137 (MQ=255) ccTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTAt > 8:309782/1‑127 (MQ=255) ccTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTATAGTctg > 1:247882/1‑137 (MQ=255) ccTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTATAGTCCt > 3:300655/1‑139 (MQ=255) ccTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTATAGTCCt > 7:205820/1‑139 (MQ=255) cGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGagag > 5:95658/1‑84 (MQ=255) cGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCGGGt > 2:10433/1‑139 (MQ=255) cGTGAGATATGTGAAAGCGCCACGATTCCCGAAGGGATAAAGGCGTACAGGTATCGGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCGGGt < 4:276895/139‑1 (MQ=255) tGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGt > 8:146876/1‑116 (MQ=255) tGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCGGGttt > 4:32363/1‑139 (MQ=255) tGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCGGGttt > 2:48623/1‑139 (MQ=255) tGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGCTATCTTTATAGTCCTGTCGGGttt > 2:350509/1‑139 (MQ=255) gAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGa < 7:70401/44‑1 (MQ=255) aGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTAt < 3:351577/116‑1 (MQ=255) aGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCGGGTTTct > 4:299664/1‑138 (MQ=255) aGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCGGGTTTCg > 3:129417/1‑139 (MQ=255) aGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCGGGTTTCg > 8:369023/1‑139 (MQ=255) aGCTATGAGAAAGCGCCACGCTTACCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCGGGTTTCg > 5:224929/1‑139 (MQ=255) gCTATGAGAAAGCGCCACGCTTCCCGACGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCGGGTTTCGc < 7:127937/139‑1 (MQ=255) gCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCGGGTTTCGc < 1:7117/139‑1 (MQ=255) aTGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCGGGTTTCGCCAc > 1:3027/1‑139 (MQ=255) gagaAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCGGGTTTCGCCACct > 7:301485/1‑139 (MQ=255) gagaAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCGGGTTTCGCCACct > 7:100394/1‑139 (MQ=255) aGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGaa < 6:344132/61‑1 (MQ=255) aGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCGGGTTTCGCCACCTCTGAc > 2:316643/1‑139 (MQ=255) aGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGCAGCTTCCAGGGGGAAACGCCTGCTATCTTTATAGTCCTGTCGGGTTTCGCCACATCTGAc > 6:152060/1‑139 (MQ=255) | TACCGGGTTGGACTCAAGACGATAGTTACCGGATAAGGCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCACACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCGGGTTTCGCCACCTCTGACTT > Exported/5166‑5442 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |