Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP006881 3,065,649 A→T 13.9% N400Y (AAC→TAC)  U712_15740 → Na(+)/H(+) antiporter subunit A

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0068813,065,6490AT13.9% 160.4 / 2.4 66N400Y (AAC→TAC) U712_15740Na(+)/H(+) antiporter subunit A
Reads supporting (aligned to +/- strand):  ref base A (12/44);  new base T (8/2);  total (20/46)
Fisher's exact test for biased strand distribution p-value = 6.55e-04
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

ATGGCAGTCGGGATTATCGATCACGAAACAGGCACACGGGATATCCGGAAGCTAGGCGGCCTGATGGCGATTATGCCGATTACTTTTACCATTTCCTTAATCGGGACATTTTCAATGGCCGGCCTACCGCCGTTTAACGGATTTTTGAGTAAAGAAATGTTTTTCACAAGCATGCTTCGCGTGACACATTTTGACCTGTTCAACGTGCAGACATGGGGCGTTCTGTTCCCTCTTTTCGCCTGGATCGGAAGTGTATTTACGTTTATCTACA  >  CP006881/3065514‑3065784
                                                                                                                                        |                                                                                                                                        
ttGGCAGTCGGGATTATCGATCACGAAACAGGCACACGGGATATCCGGAAGCTAGGCGGCCTGATGGCGATTATGCCGATTACTTTTACCATTTCCTTAATCGGGACATTTTCAATGGCCGGCCTACCGCCGTTTAAc                                                                                                                                        <  3:233765/137‑1 (MQ=255)
   gCAGTCGGGATTATCGATCACGAAACAGGCACACGGGATATCCGGAAGCTAGGCGGCCTGATGGCGATTATGCCGATTACTTTTACCATTTCCTTAATCGGGACATTTTCAATGGCCGGCCTACCGCCGTTTAACCGAt                                                                                                                                    >  5:43077/1‑139 (MQ=255)
    cAGTCGGGATTATCGATCACGAAACAGGCACACGGGATATCCGGAAGCTAGGCGGCCTGATGGCGATTATGCCGATTACTTTTACCATTTCCTTAATCGGGACATTTTCAATGGCCGGCCTACCGCCGTTTTACGGAtt                                                                                                                                   >  8:192204/1‑139 (MQ=255)
       tCGGGATTATCGATCACGAAACAGGCACACGGGATATCCGGAAGCTAGGCGGCCTGATGGCGATTATGCCGATTACTTTTACCATTTCCTTAATCGGGACATTTTCAATGGCCTGCCTACCGCCGTTTATAGGAttttt                                                                                                                                >  4:233765/1‑139 (MQ=255)
       tCGGGATTATCGATCACGAAACAGGCACACGGGATATCCGGAAGCTAGGCGGCCTGATGGCGATTATGCCGATTACTTTTACCATTTCCTTAATCGGGACATTTTCAATGGCCGGCCTACCGCCGTTTAACGGAttttt                                                                                                                                >  7:278410/1‑139 (MQ=255)
       tCGGGATTATCGATCACGAAACAGGCACACGGGATATCCGGAAGCTAGGCGGCCTGATGGCGATTATGCCGATTACTTTTACCATTTCCTTAATCGGGACATTTTCAATGGCCGGCCTACCGCCGTTTAAAGGCatttt                                                                                                                                >  4:85415/1‑139 (MQ=255)
                 cGATCACGAAACAGGCACACGGGATATCCGGAAGCTAGGCGGCCTGATGGCGATTATGCCGATTACTTTTACCATTTCCTTAATCGGGACATTTTCAATGGCCGGCCTACCGCCGTTTAACGGATTTTTGAGTAAAGaa                                                                                                                      <  5:366170/139‑1 (MQ=255)
                    tCACGAAACAGGCACACGGGATATCCGGAAGCTAGGCGGCCTGATGGCGATTATGCCGATTACTTTTACCATTTCCTTAATCGGGACATTTTCAATGGCCGGCCTACCGCCGTTTAACGGATTTTTGAGTAAAGAAATg                                                                                                                   <  4:325652/139‑1 (MQ=255)
                     cACGAAACAGGCACACGGGATATCCGGAAGCTAGGCGGCCTGATGGCGATTATGCCGATTACTTTTACCATTTCCTTAATCGGGACATTTTCAATGGCCGGCCTACCGCCGTTTAACGGATTTTTGAGTAAAGAAATGt                                                                                                                  >  2:50764/1‑139 (MQ=255)
                           aCAGGCACACGGGATATCCGGAAGCTAGGCGGCCTGATGGCGATTATGCCGATTACTTTTACCATTTCCTTAATCGGGACATTTTCAATGGCCGGCCTACCGCCGTTTAACGGATTTTTGAGTAAAGAAATGTTTTTca                                                                                                           <  6:43077/139‑1 (MQ=255)
                           aCAGGCACACGGGATATCCGGAAGCTAGGCGGCCTGATGGCGATTATGCCGATTACTTTTACCATTTCCTTAATCGGGACATTTTCAATGGCCGGCCTACCGCCGTTTAACGGATTTTTGAGTAAAGAAATGTTTTTca                                                                                                           <  4:173130/139‑1 (MQ=255)
                           aCAGGCACACGGGATATCCGGAAGCTAGGCGGCCTGATGGCGATTATGCCGATTACTTTTACCATTTCCTTAATCGGGACATTTTCAATGGCCGGCCTACCGCCGTTTAACGGATTTTTGAGTAAAGAAATGTTTTTca                                                                                                           <  4:22806/139‑1 (MQ=255)
                              ggCACACGGGATATCCGGAAGCTAGGCGGCCTGATGGCGATTATGCCGATTACTTTTACCATTTCCTTAATCGGGACATTTTCAATGGCCGGCCTACCGCCGTGTTTACGATTTTTTTGTTAAGTAAAGTGTTTTcac                                                                                                          >  2:187741/1‑138 (MQ=255)
                                    cGGGATATCCGGAAGCTAGGCGGCCTGATGGCGATTATGCCGATTACTTTTACCATTTCCTTAATCGGGACATTTTCAATGGCCGGCCTACCGCCGTGTTTCGGGTTTTTTTGTTAATAAATGTTTTTGTCAAGCCTgg                                                                                                  >  3:40806/1‑138 (MQ=255)
                                         tatCCGGAAGCTAGGCGGCCTGATGGCGATTATGTCGATTACTTTTACCATTTCCTTAATCGGGACATTTTCAATGGCCGGCCTACCGCCGTTTAACCGATTTTTTTGTTAAGAAATGTTTTTAACAAGCATGCGTcgc                                                                                             >  7:258501/1‑139 (MQ=255)
                                             cGGAAGCTAGGCGGCCTGATGGCGATTATGCCGATTACTTTTACCATTTCCTTAATCGGGACATTTTCAATGGCCGGCCTACCGCCGTTTAACGGATTTTTGAGTAAAGAAATGTTTTTCACAAGCATGCTTCGCGTGa                                                                                         <  1:256387/139‑1 (MQ=255)
                                             cGGAAGCTAGGCGGCCTGATGGCGATTATGCCGATTACTTTTACCATTTCCTTAATCGGGACATTTTCAATGGCCGGCCTACCGCCGTTTAACGGATTTTTGAGTAAAGAAATGTTTTTCACAAGCATGCTTCGCGTGa                                                                                         <  3:84523/139‑1 (MQ=255)
                                              ggtaGCTAGGCGGACTGATGGCGATTATGGCGATTACTTTTACCATTTCCTTAATCGGGACATTTTCAATTGCCGGCCTACCGCCGTTTAACGGATTTTTGAGTAAAGAAATGTTTTTCACAAGGATGCTTCGCGTGac                                                                                        <  5:118146/136‑1 (MQ=255)
                                              ggATGCTAGGCGGCCTGATGGCGATTATGCCGATTACTTTTACCATTTCCTTAATCGGGACATTTTCAATGGCCGGCCTACCGCCGGTTAACGGATTTTTGAGTAAAGAAATGTTATTCACAAGCATGGTTCGCGTGac                                                                                        <  4:239658/139‑1 (MQ=255)
                                              ggAAGCTAGGCGGCCTGATGGCGATTATGCCGATTACTTTTACCATTTCCTTAATCGGGACATTTTCAATGGCCGGCCTACCGCCGTTTAACGGATTTTTGAGTAAAGAAATGTTTTTCACAAGCATGCTTCGCGTGac                                                                                        <  7:194806/139‑1 (MQ=255)
                                              ggAAGCTAGGCGGCCTGATGGCGATTATGCCGATTACTTTTACCATTTCCTTAATCGGGACATTTTCAATGGCCGGCCTACCGCCGTTTAACGGATTTTTGAGTAAAGAAATGTTTTTCACAAGCATGCTTCGCGTGac                                                                                        <  7:101088/139‑1 (MQ=255)
                                              ggAAGCTAGGCGGCCTGATGGCGATTATGCCGATTACTTTTACCATTTCCTTAATCGGGACATTTTCAATGGCCGGCCTACCGCCGTTTAACGGATTTTTGAGTAAAGAAATGTTTTTCACAAGCATGCTTCGCGTGac                                                                                        <  8:209864/139‑1 (MQ=255)
                                              ggAAGCTAGGCGGCCTGATGGCGATTATGCCGATTACTTTTACCATTTCCTTAATCGGGACATTTTCAATGGCCGGCCTACCGCCGTTTAACGGATTTTTGAGTAAAGAAATGTTTTTCACAAGCATGCTTCGCGTGac                                                                                        <  4:92581/139‑1 (MQ=255)
                                              ggAAGCTAGGCGGCCTGATGGCGATTATGCCGATTACTTTTACCATTTCCATAATCGGGACATTTTCAATGGCCGGCCTACCGCCGTTTAACGGATTTTTGAGTAAAGAAATGTTTTTCACAAGCATGCTTCGCGTGac                                                                                        <  1:187741/139‑1 (MQ=255)
                                               gAAGCTAGGCGGCCTGATGGCGATTATGCCGATTACTTTTACCATTTCCTTAATCGGGACATTTTCAATGGCCGGCCTACCGCCGTGTTTAGTATTTTTTTGTAAATAAATTTGTTTTACAAACCTTCTTCGCGTGtca                                                                                       >  6:36763/1‑139 (MQ=255)
                                                 aGCTAGGCGGCCTGATGGCGATTATGCCGATTACTTTTACCATTTCCTTAATCGGGACATTTTCAATGGCCGGCCTACCGCCGTTTTAAGGATTTTTTAGTAAATAAATGTTTTTAACAAGCATGCTTAGCGTGAcaca                                                                                     >  1:59360/1‑139 (MQ=255)
                                                 aGCTAGGCGGCCTGATGGCGATTATGCCGATTACTTTTACCATTTCCTTAATCGGGACATTTTCAATGGCCGGCCTACCGCCGTTTAACGGATTTTTGTGTTAAGAAATGTTTTTAACAAGCATGCTTCGCGTGAcaca                                                                                     >  5:121923/1‑139 (MQ=255)
                                                 aGCTAGGCGGCCTGATGGCGATTATGCCGATTACTTTTACCATTTCCTTAATCGGGACATTTTCAATGGCCGGCCTACCGCCGTTTAACGGATTTTTGAGTAAAGAAATGTTTTTca                                                                                                           <  6:258856/117‑1 (MQ=255)
                                                 aGCTAGGCGGCCTGATGGCGATTATGCCGATTACTTTTACCATTTCCTTAATCGGGACATTTTCAATGGCCGGCCTACCGCCGTTTAACGGATTTTTGAGTAAAGAAATGTTTTTca                                                                                                           >  5:258856/1‑117 (MQ=255)
                                                      ggcggcCTGATGGCGATTATGCCGATTACTTTTACCATTTCCTTAATCGGGACATTTTCAATGGCCGGCCTACCGCCGTTTAACGGATTTTTGAGTATAGAAATGTTTTTACCAAGCATGCTTAGCGTGCCACCtttt                                                                                 >  8:209361/1‑138 (MQ=255)
                                                       gcggcCTGATGGCGATTATGCCGATTACTTTTACCATTTCCTTAATCGGGACATTTTCAATGGCCGGCCTACCGCCGTGTTAAGGATTTTTGAGTTAATAAATTTTTTTTACAAGAATTCTTGGCGTGAGACAatttt                                                                                >  3:239758/1‑137 (MQ=255)
                                                        cggcCTGATGGCGATTATGCCGATTACTTTTACCATTTCCTTAATCGGGACATTTTCAATGGCCGGCCTACCGCCGTTTAACGGATTTTTGAGTAAAGAAATGTTTTTCACAAGCATGCTTCGCGTGACACATTTTGAc                                                                              <  8:324713/139‑1 (MQ=255)
                                                        cggcCTGATGGCGATTATGCCGATTACTTTTACCATTTCCTTAATCGGGACATTTTCAATGGCCGGCCTACCGCCGTTTAACGGATTTTTGAGTAAAGAAATGTTTTTCACAAGCATGCTTCGCGTGACACATTTTGAc                                                                              <  5:156769/139‑1 (MQ=255)
                                                               aTGGCGATTATGCCGATTACTTTTACCATTTCCTTAATCGGGACATTTTCAATGGCCGGCCTACCGCCGTTTAACGGATTTTTGAGTAAAGAAATGTTTTTCACAAGCATGCTTCGCGTGACACATTTTGACCTGTTc                                                                        <  1:353487/138‑1 (MQ=255)
                                                               aTGGCGATTATGCCGATTACTTTTACCATTTCCTTAATCGGGACATTTTCAATGGCCGGCCTACCGCCGTTTAACGGATTTTTGAGTAAAGAAATGTTTTTCACAAGCATGCTTCGCGTGACACATTTTGACCTGTTCa                                                                       <  3:85415/139‑1 (MQ=255)
                                                               aTGGCGATTATGCCGATTACTTTTACCAATTCCTTAATCGGGACATTTTCAATGGCCGGCCTACCGCCGTTTAACGGATTTTTGAGTAAAGAAATGTTTTTCACAAGCATGCTTCGCGTGACACATTTTGACCTGTTCa                                                                       <  8:315772/139‑1 (MQ=255)
                                                                    gATTATGCCGATTACTTTTACCATTTCCTTAATCGGGACATTTTCAATGGCCGGCCTACCGCCGTTTAACGGATTTTTGAGTAAAGAAATGTTTTTCACAAGCATGCTTCGCGTGACACATTTTGACCTGTTCAACGTg                                                                  <  2:324331/139‑1 (MQ=255)
                                                                     aTTATGCCGATTACTTTTACCATTTCCTTAATCGGGACATTTTCAATGGCCGGCCTACCGCCGTGGTGCGGGTTTTTGAGTAAATCAGTGGTTTTCGCCAGCCTGCGTCGCGGGCCACAGTTTGACCGGTGCAACgggg                                                                 >  5:347660/1‑136 (MQ=255)
                                                                      gtATGCCGAGTACTTTTACCATTTCCTTAATCGGGACATTTTCAATGGCCGGCCTACCGCCGTTTAACGGATTTTTGAGTAAAGAAATGTTTTTCACAAGCATGCTTCGCGTGACACATTTTGACCTGTTCAACGTGCa                                                                <  7:329857/138‑1 (MQ=255)
                                                                       tATGCCGATTACTTTTACGATTTGCTTTATCTGTACATGTTCAATGGCCGGCGTTCCGCCGTTTTACGGATTTTTGAGTTAAGAAATGTTTTTCACAAGCATGCTTCGCGTGACACATTTTGACCTGTTCAACGTGCa                                                                <  7:245470/138‑1 (MQ=255)
                                                                       tATGCCGATTACTTTTACCTTTTCCTTAATCTGTACATTTTCAATGGCCGGCCTACCGAAGTTTTACGGATTTTTGAGTAAAGAAATGTTTTTCACAAGCATGCTTCGCGTGACACATTTTGACCTGTTCAACGTGCa                                                                <  7:139380/138‑1 (MQ=255)
                                                                              aTTACTTTTACCATTTCCTTAATCGGGACATTTTCAATGGCCGGCCTACCGCCGTTTAACGGATTTTTGAGTAAAGAAATGTTTTTCACAAGCATGCTTCGCGTGACACATTTTGACCTGTTCAACGTGCAGACATggg                                                        <  4:256884/139‑1 (MQ=255)
                                                                                  ctattACCATATCCTTAATCGGGTCATTTTCAATGGCCGGCCTACCGCCGTTTAACGGATTTTTGAGTAAAGAAATGTTTTTCACAAGCATGCTTCGCGTGACACATTTTGACCTGTTCAACGTGCAGACATGGGGCGt                                                    <  3:83171/136‑1 (MQ=255)
                                                                                  cTTTTACCATTTCCTTAATCGGGACATTTTCAATGGCCGGCCTACCGCCGTTTAACGGATTTTTGAGTAAAGAAATGTTTTTCACAAGCATGCTTCGCGTGACACATTTTGACCTGTTCAACGTGCAGACATGGGGCGt                                                    <  1:341504/139‑1 (MQ=255)
                                                                                  cTTTTACCATTTCCTTAATCGGGACATTTTCAATGGCCGGCCTACCGCCGTTTAACGGATTTTTGAGTAAAGAAATGTTTTTCACAAGCATGCTTCGCGTGACACATTTTGACCTGTTCAACGTGCAGACATGGGGCGt                                                    <  6:107001/139‑1 (MQ=255)
                                                                                     ttACCCTTTCCTTAATCGGGACATTTTCAATGGCCGGCCTACCGCCGTTTAACGGATTTTTGAGTAAAGAAATGTTTTTCACAAGCATGCTTCGCGTGACACATTTTGACCTGTTCAACGTGCAGACATGGGGCGtt                                                   <  2:98444/137‑1 (MQ=255)
                                                                                     ttACCATTTCCTTAATCGGGACATTTTCAATGGCCGGCCTACCGCCGTTTAACGGATTTTTGAGTAAAGAAATGTTTTTCACAAGCATGCTTCGCGTGACACATTTTGACCTGTTCAACGTGCAGACATGGGGCGtt                                                   <  8:226074/137‑1 (MQ=255)
                                                                                            ttCCTTAATCGGGACATTTTCAATGGCCGGCCTACCGCCGTTTATAGGATTTTTGAGTAAAAAAAATTTTTTAACAACCATTCTTAGCGTGACACCTTTTGACCTGTTGAACGTGACGACATGGGGGGTTATGTTgccg                                          >  8:251546/1‑138 (MQ=255)
                                                                                                      gggACATTTTCAATGGCCGGCCTACCGCCGTTTAACGGATTTTTGAGTAAAGAAATGTTTTTCACAAGCATGCTTCGCGTGACACATTTTGACCTGTTCAACGTGCAGACATGGGGCGTTCTGTTCCCTCTTTTCGcc                                 <  8:278410/138‑1 (MQ=255)
                                                                                                      gggACATTTTCAATGGCCGGCCTACCGCCGTTTAACGGATTTTTGAGTAAAGAAATGGTTTTCACAAGCATGCTTCGCGTGACACATTTTGACCTGTTCAACGTGCAGACATGGGGCGTTCTGTTCCCTCTTTTCGcc                                 <  1:197469/138‑1 (MQ=255)
                                                                                                        gACTTTTTCAATGGGCGGCCTACCGCCGTTTAACGGATTTTCGAGTAATGTAATGTTTTTCACATGCATGCTTCGCGTGAGACATTTTGACCTGTTGATCGTGGAGACTTGGGGCGTTCTGTTCGCTCTTTTCGcc                                 <  3:95078/136‑1 (MQ=255)
                                                                                                          cATTTTCAATGGCCGGCCTACCGACGTTTATCGGATTTTTGAGTAAAGATATGTTTTTCACAAGCATGCTTCGCGTGACACTTTTTGACCTTTTCAACGTGGAGACATGGGGCGTGCTGTTGACTCTTTTCGCCTGGAt                            <  7:63140/139‑1 (MQ=255)
                                                                                                                cAATGGCCGGCCTACCGCCGTTTAACGGATTTTTGAGTAAAGAAATGTTTTTCACAAGCATGCTTCGCGTGACACATTTTGACCTGTTCAACGTGCAGACATGGGGCGTTCTGTTCCCTCTTTTCGCCTGGATCGGaa                       <  3:152395/138‑1 (MQ=255)
                                                                                                                cAATGGCCGGCCTACCGCCGTTTAACGGATTTTTGAGTAAAGAAATGTTTTTCACAAGCATGCTTCGCGTGACACATTTTGACCTGTTCAACGTGCAGACATGGGGCGTTCTGTTCCCTCTTTTCGCCTGGATCGGaa                       <  5:46690/138‑1 (MQ=255)
                                                                                                                cAATGGCCGGCCTACCGCCGTTTAACGGATTTTTGAGTAAAGAAATGTTTTTCACAAGCATGCTTCGCGTGACACATTTTGACCTGTTCAACGTGCAGACATGGGGCGTTCTGTTCCCTCTTTTCGCCTGGATCGGaa                       <  5:36763/138‑1 (MQ=255)
                                                                                                                cAATGGCCGGCCTACCGCCGTTTAACGGATTTTTGAGTAAAGAAATGTTTTTCACAAGCATGCTTCGCGTGACACATTTTGACCTGTTCAACGTGCAGACATGGGGCGTTCTGTTCCCTCTTTTCGCCTGGATCGGaa                       <  4:239758/138‑1 (MQ=255)
                                                                                                                cAATGGCCGGCCTACCGCCGTTTAACGGATGTTTGAGTAAAGAAATGTTTTTCACAAGCATGCTTCGCGTGACACATTTTGACCTGTTCAACGTGCAGACATGGGGCGTTCTGTTCCCTCTTTTCGCCTGGATCGGaa                       <  1:155648/138‑1 (MQ=255)
                                                                                                                cAATGGCCGGCCTACCGCCGGTTAACGGATTTTTGAGTAAAGAAATGTTTTTCACAAGCATGCTTCGCGTGACACATTTTGACCTGTTCAACGTGCAGACATGGGGCGTTCTGTTCCCTCTTTTCGCCTGGATCGGaa                       <  4:5201/138‑1 (MQ=255)
                                                                                                                cAATGGACGGCCTACCGCCGTTTAACGGATTTTTGAGTAAAGAAATGTTTTTCACAAGCATGCTTCGCGTGACACATTTTGACCTGTTCAACGTGCAGACATGGGGCGTTCTGTTCCCTCTTTTCGCCTGGATCGGaa                       <  2:96373/138‑1 (MQ=255)
                                                                                                                     gccggccTACCGCCGTGTAAAGGATTTTTTAGTAAAGAAAATTTTTTAACAAACAATCTTCCCCTGACACAATTTGACCTGTTAAAACGGCAGACATTGGGCCTTGATTTACCACATTTCGCCTGGATCGGAAgggaat                 >  6:340865/1‑134 (MQ=255)
                                                                                                                      ccggccTACCGCCGTGTTACGGGGTTTTTAGTTAAGAAATGTTTTTGACAAGCATGGGTCGCGTGACACATTTTTGCCTGTTGCACGTGCAGACATGGGGCGGTGTGTGGCCTCTTTTGGCCGGGATAGGGAGTGTAtt                >  6:5311/1‑139 (MQ=255)
                                                                                                                        ggccTACCGCCGTTTAACGGATTTTTGAGTAAAGAAATGTTTTTCACAAGCATGCTTCGCGTGACACATTTTGACCTGTTCAACGTGCAGACATGGGGCGTTCTGTTCCCTCTTTTCGCCTGGATCGGAAGTGTATTTa              <  7:251546/139‑1 (MQ=255)
                                                                                                                        ggccTACCGCCGTTTAACGGATTTTTGAGTAAAGAAATGTTTTTCACAAGCATGCTTCGCGTGACACATTTTGACCTGTTCAACGTGCAGACATGGGGCGTTCTGTTCCCTCTTTTCGCCTGGATCGGAAGTGTATTTa              <  4:40806/139‑1 (MQ=255)
                                                                                                                          ccTACCGCCGTTTAACGGATTTTTGAGTAAAGAAATGTTTTTCACAAGCATGCTTCGCGTGACACATTTTGACCTGTTCAACGTGCAGACATGGGGCGTTCTGTTCCCTCTTTTCGCCTGGATCGGAAGTGTATTTACg            <  1:36984/139‑1 (MQ=255)
                                                                                                                              ccgccgTTTAACGGATTTTTGAGTAAAGAAATGTTTTTCACAAGCATGCTTCGCGTGACACATTTTGACCTGTTCAACGTGCAGACATGGGGCGTTCTGTTCCCTCTTTTCGCCTGGATCGGAAGTGTATTTACGttt         <  8:258501/138‑1 (MQ=255)
                                                                                                                                    tttAACGGATTTTTGAGTAAAGAAATGTTTTTCACAAGCATGCTTCGCGTGACACATTTTGACCTGTTCAACGTGCAGACATGGGGCGTTCTGTTCCCTCTTTTAGCCTGGATCGGAAGTGTATTTTCGTTTATCTaaa  >  5:130266/1‑137 (MQ=255)
                                                                                                                                        |                                                                                                                                        
ATGGCAGTCGGGATTATCGATCACGAAACAGGCACACGGGATATCCGGAAGCTAGGCGGCCTGATGGCGATTATGCCGATTACTTTTACCATTTCCTTAATCGGGACATTTTCAATGGCCGGCCTACCGCCGTTTAACGGATTTTTGAGTAAAGAAATGTTTTTCACAAGCATGCTTCGCGTGACACATTTTGACCTGTTCAACGTGCAGACATGGGGCGTTCTGTTCCCTCTTTTCGCCTGGATCGGAAGTGTATTTACGTTTATCTACA  >  CP006881/3065514‑3065784

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: