| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP006881 | 3,437,370 | C→A | 23.2% | Q185K (CAA→AAA) | U712_17650 → | putative MFS‑type transporter yvkA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 3,437,370 | 0 | C | A | 23.2% | 268.5 / 25.5 | 131 | Q185K (CAA→AAA) | U712_17650 | putative MFS‑type transporter yvkA |
| Reads supporting (aligned to +/- strand): ref base C (62/36); new base A (2/31); total (64/67) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.80e-09 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 131 total aligned reads displayed.
TTGGTGCAGCACTCGGGCCTTTTATCGGCTCTATACTGATTGACAGCTTCAGCTGGCATTCGATTTTTTGGGTCAACATCCCGTTCCTCGCCATTGCTTTATTTACGGCATTAACGATGTTT‑CCTCAATATAAAGAAAATAAATCTGACGCGCCGCTGGATATCATCGGCTCTCTCTTGCTTGCAGGCAGCATCGTTTCCATTATCCTGCTGACGAAAAATGAGGCTCCATGGGGATATACTGTATACAGTGTATTGA > CP006881/3437245‑3437502 | ttGGTGCAGCACTCGGGCCTTTTATCGGCTCTATACTGATTGACAGCTTCAGCTGGCATTCGATTTTTTGGGTCAACATCCCGTTCCTCGCCATTGCTTTATTTACGGCATTAACGATGTTT‑CCTCAATATAAAGaaaa > 6:292199/1‑139 (MQ=255) agcaCTCGGGCCTTTTATCGGCTCTATACTGATTGACAGCTTCAGCTGGCATTCGATTTTTTGGGTCAACATCCCGTTCCTCGCCATTGCTTTATTTACGGCATTAACGATGTTT‑CCTCAATATAAAGAAAATAAATCt > 1:265403/1‑139 (MQ=255) agcaCTCGGGCCTTTTATCGGCTCTATACTGATTGACAGCTTCAGCTGGCATTCGATTTTTTGGGTCAACATCCCGTTCCTCGCCATTGCTGTATTTACGGCATTAACGATGTTT‑CCTCAATATAAAGAAAATAAATCt > 5:64982/1‑139 (MQ=255) tCGGGCCTTTTATCGGCTCTATACTGATTGACAGCTTCAGCTGGCTTTCGATTTTTTGGGTCAACATCCCGTTCCTCGCCATTGCTTTATTTACGGCAGTAACGATGTTT‑CCGCAATATAAAGAAAATAAATCTGAcgc > 1:113576/1‑139 (MQ=255) cGGGCCTTTTATCGGCGCTACACGGCTGGACAGCTTCAGCTGGCATTCGATTTTTTGCGTCACCAGCCCGTTCCGCGCCATTGCTTTATTTCCGGCATTACCTATGTCT‑CCTCAATATAAATAAAAAAAATCTGCcgcg < 2:284199/139‑1 (MQ=255) gggCCTTTTATCGGCTCTATACTGATTGACAGCTTCAGCTGGCATTCGATTTTTTGGGTCAACATCCCGTTCCTCGCCATTGCTTTATTTACGGCATTAACGATGTTT‑CCTCAATATaaa < 5:73664/120‑1 (MQ=255) gggCCTTTTATCGGCTCTATACTGATTGACAGCTTCAGCTGGCATTCGATTTTTTGGGTCAACATCCCGTTCCTCGCCATTGCTTTATTTACGGCATTAACGATGTTT‑CCTCAATATAAAGAAAATAAATCTGACgcgc > 8:255895/1‑139 (MQ=255) gggCCTTTTATCGGCTCTATACTGATTGACAGCTTCAGCTGGCATTCGATTTTTTGGGTCAACATCCCGTTCCTCGCCATTGCTTTATTTACGGCATTAACGATGTTT‑CCTCAATATAAAGAAAATAAATCTGACgcgc > 8:20540/1‑139 (MQ=255) gggCCTTTTATCGGCTCTATACTGATTGACAGCTTCAGCTGGCATTCGATTTTTTGGGTCAACATCCCGTTCCTCGCCATTGCTTTATTTACGGCATTAACGATGTTT‑CCTCAATATAAAGAAAATAAATCTGACgcgc > 4:256077/1‑139 (MQ=255) gggCCTTTTATCGGCTCTATACTGATTGACAGCTTCAGCTGGCATTCGATTTTTTGGGTCAACATCCCGTTCCTCGCCATTGCTTTATTTACGGCATTAACGATGTTT‑CCTCAATATAAAGAAAATAAATCTGACgcgc > 2:52768/1‑139 (MQ=255) gCCTTTTATCGGCTCTATACTGATTGACAGCTTCAGCTGGCATTCGATTTTTTGGGTCAACATCCCGTTCCTCGCCATTGCTTTATTTACGGCATTAACGATGTTT‑CCTCAATATAAAGAAAATAAATCTGACGcgccg < 7:79843/139‑1 (MQ=255) cccTTGTAGCTGCTATAAACTGTTTAACAGCTTCAGCTGCCATTCGATTTTTTGGGTCAACCTCCC‑TTCCCCCCCCTTTGGTTATTTACGGCAATTACCGTGTTTACCTCAATATAAAAAAAAAAAACCTCCCGcgccg < 8:133105/138‑1 (MQ=255) ttATCGGCTCTATACTGATTGACAGCTTCAGCTGGCATTCGATTTTTTGGGTCAACATCCCGTTCCTCGCCATTGCTTTATTTACGGCATTAACGATGTTT‑CCTCAATATAAAGAAAATAAATCTGACGCGCCGCTGGa > 2:128878/1‑139 (MQ=255) ttcTGATTTTCTGCTTCCTCTTGAATTCGATTTTTTGTGTCACCATCCCGTTCCTCGCCATTGATTTATTTCCGGCTTAACCTATGTTT‑ACTCAATATAAATAAAATAAATCTGACGCGCCGCTGGATATCATCGGct < 6:115806/136‑1 (MQ=255) taCTGATTGACAGCTTCAGCTGGCATTCGATTTTTTGGGTCAACATCCCGTTCCTCGCCATTGCTTTATTTACGGCATTAACGATGTTT‑CCTCAATATAAAGAAAATAAATCTGACGCGCCGCTGGATATCATCGGctc > 6:252837/1‑139 (MQ=255) taCTGATTGACAGCTTCAGCTGGCATTCGATTTTTTGGGTCAAAATCCCGTTCCTCGCCATTGCTTTATTTACGGCATTAACGATGTTT‑CCTCAATATAAATAAAATAAATCTGACGCGCCGCTGGATATCATCGGctc < 8:94398/139‑1 (MQ=255) taCTGATTCACAGCTTCAGCTGGCATTCTTTTTTTTGGGTCAACAGCCCGTTCGTCGCCATTGCTTTATTTCCGGAATTAACGATGTTT‑CCTAAAAATAAATAAAAAAAATCGGCCGCGCCGCTGGATATCATCGGct < 5:119276/138‑1 (MQ=255) aTTGACAGCTTCAGCTGGCATTCGATTTTTTTGGTCAACATCCCGTTCCTCGCCATTGCTTTATTTACGGCATTAACGATGTTT‑CCTCAATATAAATAAAATAAATCTGACGCGCCGCTGGATATCATCGGctctctct > 5:307495/1‑139 (MQ=255) aTTGACAGCTTCAGCTGGCATTCGATTTTTTGGGTCAACATCCCGTTCCTCGCCATTGCTTTATTTACGGCATTAACGATGTTT‑CCTCAATATAAAGAAAATAAATCTGACGCGCCGCTGGATATCATCGGctctctct > 2:116410/1‑139 (MQ=255) aTTGACAGCTTCAGCTGGCATTCGATTTTTTGGGTCAACATCCCGTTCCTCGCCATTGCTTTATTTACGGCATTAACGATGTTT‑CCTCAATATAAAGAAAATAAATCTGACGCGCCGCTGGATATCATCGGctctctct > 4:312616/1‑139 (MQ=255) aTTGACAGCTTCAGCTGGCATTCGATTTTTTGGGTCAACATCCCGTTCCTCGCCATTGCTTTATTTACGGCATTAACGATGTTT‑CCTCAATATAAAGAAAATAAATCTGACGCGCCGCTGGATATCATCGGctctctct > 1:339588/1‑139 (MQ=255) aTTGACAGCTTCAGCTGGCATTCGATTTTTTGGGTCAACATCCCGTTCCTCGCCATTGCTTTATTTACGGCATTAACGATGTTT‑CCTCAATATAAAGAAAATAAATCTGACGCGCCGCTGGATATCATCGGctctctct > 4:42510/1‑139 (MQ=255) aTTGACAGCTTCAGCTGGCATTCGATTTTTTGGGTCAACATCCCGTTCCTCGCCATTGCTTTATTTACGGCATTAACGATGTTT‑CCTCAATATAAAGAAAATAAATCTGACGCGCCGCTGGATATCATCGGctctctct > 4:5353/1‑139 (MQ=255) aTTGACAGCTTCAGCTGGCATTCGATTTTTTGGGTCAACATCCCGTTCCTCGCCATTGCTTTATTTACGGCATTAACGATGTTT‑CCTCAATATAAAGAAAATAAATCTGACGCGCCGCTGGATATCATCGGctctctct > 5:263484/1‑139 (MQ=255) aTTGACAGCTTCAGCTGGCATTCGATTTTTTGGGTCAACATCCCGTTCCTCGCCATTGCTTTATTTACGGCATTAACGATGTTT‑CCTCAATATAAAGAAAATAAATCTGACGCGCCGCTGGATATCATCGGctctctct > 1:321939/1‑139 (MQ=255) aTTGACAGCTTCAGCTGGCATTCGATTTTTTGGGTCAACATCCCGTTCCTCGCCATTGCTTTATTTACGGCATTAACGATGTTT‑CCTCAATATAAAGAAAATAAATCTGACGCGCCGCTGGATATCATCGGctctctct > 5:97696/1‑139 (MQ=255) aTTGACAGCTTCAGCTGGCATTCGATTTTTTGGGTCAACATCCCGTTCCTCGCCATTGCTTTATTTACGGCATTAACGATGTTT‑CCTCAATATAAAGAAAATAAATCTGACGCGCCGCTGGATATCATCGGctctctct > 1:199761/1‑139 (MQ=255) aTTGACAGCTTCAGCTGGCATTCGATTTTTTGGGTCAACATCCCGTTCCTCGCCATTGCTTTATTTACGGCATTAACGATGTTT‑CCTCAATATAAAGAAAATAAATCTGACGCGCCGCTGGATATCATCGGctctctct > 7:130987/1‑139 (MQ=255) aTTGACAGCTTCAGCTGGCATTCGATTTTTTGGGTCAACATCCCGTTCCTCGCCATTGCTTTATTTACGGCATTAACGATGTTT‑CCTCAATATAAAGAAAATAAATCTGACGCGCCGCTGGATATCATCGGctctctct > 7:173438/1‑139 (MQ=255) aTTGACAGCTTCAGCTGGCATTCGATTTTTTGGGTCAACATCCCGTTCCTCGCCATTGCTTTATTTACGGCATTAACGATGTTT‑CCTCAATATAAAGAAAATAAATCTGACGCGCCGCTGGATATCATCGGctctctct > 8:101220/1‑139 (MQ=255) aTTGACAGCTTCAGCTGGCATTCGATTTTTTGGGTCAACATCCCGTTCCTCGCCATTGCTTTATTTACGGCATTAACGATGTTT‑CCTCAATATAAAGAAAATAAATCTGACGCGCCGCTGGATATCATCGGctctctct > 8:151285/1‑139 (MQ=255) aTTGACAGCTTCAGCTGGCATTCGATTTTTTGGGTCAACATCCCGTTCCTCGCCATTGCTTTATTTACGGCATTAACGATGTTT‑CCTCAATATAAAGAAAATAAATCTGACGCGCCGCTGGATATCATCGGctctctct > 8:172444/1‑139 (MQ=255) aTTGACAGCTTCAGCTGGCATTCGATTTTTTGGGTCAACATCCCGTTCCTCGCCATTGCTTTATTTACGGCATTAACGATGTTT‑CCTCAATATAAAGAAAATAAATCTGACGCGCCGCTGGATATCATCGGctctctc > 2:17677/1‑138 (MQ=255) aTTGACAGCTTCAGCTGGCATTCGATTTTTTGGGTCAACATCCCGTTCCTCGCCATTGCTTTATTTACGGCATTAACGATGTTT‑CCTCAATATAAAGAAAATAAATCTGACGCGCCGCTGGATATCATCGGctctctat > 1:191924/1‑137 (MQ=255) aTTGACAGCTTCAGCTGGCATTCGATTTTTTGGGTCAACATCCCGTTCCTCGCCATTGCTTTATTTACGGCATTAACGATGTTT‑CCTCAATATAAAGAAAATAAATCTGACGCGCCGCTGGATATCATCGGctcactct > 8:37119/1‑139 (MQ=255) aTTGACAGCTTCAGCTGGCATTCGATTTTTTGGGTCAACATCCCGTTCCTCGCCATTGCTTTATTTACGGCATTAACGATGTTT‑CCTCAATATAAAGAAAATAAATCTGACGCGCCGATGGATATCATCGGctctctct > 2:288801/1‑139 (MQ=255) aTTGACAGCTTCAGCTGGCATTCGATTTTTTGGGTCAACATCCCGTTCCTCGCCATTGCTTTATTTACGGCATTAACGATGTTT‑CCTCAATATAAAGAAAATAAATCTGACGCGACGCTGGATATCATCGGctctctct > 1:156343/1‑139 (MQ=255) aTTGACAGCTTCAGCTGGCATTCGATTTTTTGGGACAACCTACCGTTCCTCGCCATTGGTTTATTTACGGCATTAACGATGTTT‑CCTAATTATATAGAAAATAAATCTGAGGCGACGCTGGATAGCAGCGGcgctgact > 8:186126/1‑135 (MQ=255) cAGCTTCAGCTGGCATTCGATTTTTTGGGTCAACATCCCGTTCCTCGCCATTGCTTTATTTACGGCATTAACGATGTTT‑CCTCAATATAAAGAAAATAAATCTGACGCGCCGCTGGATATCATCGGCTCTCTcttgctt > 6:135848/1‑139 (MQ=255) cAGCTTCAGCTGGCATTCGATTTTTTGGGTCAACATCCCGTTCCTCGCCATTGCTTTATTTACGGCATTAACGATGTTT‑CCTCAATATAAAGAAAATAAATCTGACGCGCCGCTGGATATCATCGGCTCTCTcttgctt > 1:188621/1‑139 (MQ=255) cAGCTTCAGCTGGCATTCGATTTTTTGGGTCAACATCCCGTTCCTCGCCATTGCTTTATTTACGGCATTAACGATGTTT‑CCTCAATATAAAGAAAATAAATCTGACGCGCCGCTGGATATCATCGGCTCTCTcttgctt > 5:74123/1‑139 (MQ=255) cAGCTTCAGCTGGCATTCGATTTTTTGGGTCAAAATCCCGTTCCTCGCCATTGCATTATTTACGGCATTAACGATGTTT‑CCTAAATATAAAGAAAATAAATCTGACGCGCCGCTGGATATCATCGGCTCTATcttgctt > 4:35865/1‑139 (MQ=255) gCTTCAGCTGGCATTCGATTTTTTGGGTCAACATCCCGTTCCTCGCCATTGCTTTATTTACGGCATTAACGATGTTT‑CCTCAATATAAAGAAAATAAATCTGACGCGCCGCTGGATATCATCGGCTCTCTcttgcttg > 1:112128/1‑138 (MQ=255) cTTCAGCTGGCATTCGATTTTTTGGGTCAACATCCCGTTCCTCGCCATTGCTTTATTTACGGCATTAACGATGTTT‑CCTCAATATAAAGAGAATAAATCTGACGCGCCGCTGGATATCATCGGCTCTCTcttgcttg > 5:348807/1‑137 (MQ=255) ggCATTCGATTTTTTGGGTCAACATCCCGTTCCTCGCCATTGCTTTATTTACGGCATTAACGATGTTT‑CCTCAATATAAAGAAAATAAATCTGACGCGCCGCTGGATATCATCGGCTCTCTCTTGCTTGCAGGCAGCAt > 1:35921/1‑139 (MQ=255) cATTCGATTTTTTGGGTCAACATCCCGTTCCTCGCCATTGCTTTATTTACGGCATTAACGATGTTT‑CCTCAATATAAAGAAAATAAATCTGACGCGCCGCTGGATATCATCGGCTCTCTCTTGCTTGCAGGCAGCAGCg > 5:221825/1‑139 (MQ=255) aTTCGATTTTTGGGGGAAACATCCCGTTCCTCCCCATTGCTTTAATTACGCAATTCACGATGTTA‑CCTAAATATAAACAAAAAAATTCTCCCGCGCCGCTGGATATCATCGGCTCTCTCTTGCTTGCAGGCAGCATCGt < 3:193693/139‑1 (MQ=255) tttGGGTCAACATCCCGTTCCTCGCCATTGCTTTATTTACGGCATTAACGATGTTT‑CCTCAAtata < 5:168380/66‑1 (MQ=255) tttGGGTCAACATCCCGTTCCTCGCCATTGCTTTATTTACGGCATTAACGATGTTT‑CCTCAAtata > 6:168380/1‑66 (MQ=255) tCAACTTCCCGTTCCTCGCAATTGATTTATTTACGGCTTTACCGATGTTT‑CCAAAATATAAATAAAAAAAATCTGACGCGCCGCTGGATATCATCGGCTCTCTCTTGCTTGCAGGCAGCATCGTTTCCATTATCctgct < 2:321939/139‑1 (MQ=255) tCAACATCCGGTTCCTCGCCATTGCTTTTTTTACGGCATAAACGATGTTT‑CCTAAATAAAAATAAAAAAAATCTCCCGCGCCGCTGGATATCATCGGCTCTCTCTTGCTTGCAGGCAGCATCGTTTCCATTATCctgct < 6:74123/139‑1 (MQ=255) ccAACATCCCGTTCCTCGCCATTGCTTATATTACGGCATTAACGATGTTT‑CCACAATATAAACAAAATAAATCTCCCGCGCCGCTGGATATCATCGGCTCTCTCTTGCTTGCAGGCAGCATCGTTTCCATTATCctgct < 1:288801/138‑1 (MQ=255) cAACATCCCGTTCCTCGCCATTGCTTTATTTACGGCATTAACGATGTTT‑CCTCAATATAAAGAAAATAAATCTGACGCGCCGCTGGATATCATCGGCTCTCTCTTGCTTGCAGGCAGCATCGTTTCCATTATCatgct > 5:226431/1‑138 (MQ=255) cGTTCCTCGCCATTGCTTTATTTACGGCATTAACGATGTTT‑CCTCAATATAAAGAAAATAAATCTGACGCGCCGCTGGATATCATCGGCTCTCTCTTGCTTGCAGGCAGCATCGTTTCCATTATCCTGCTGACGaaaaa > 8:263451/1‑139 (MQ=255) cGTTCCTCGCCATTGCTTTATTTACGGCATTAACGATGTTT‑CCTCAATATAAAGAAAATAAATCTGACGCGCCGCTGGATATCATCGGCTCTCTCTTGCTTGCAGGCAGCATCGTTTCCATTATCCTGCTGACGaaaaa > 7:192549/1‑139 (MQ=255) ccTCGCCATTGCTTTATTTACGGCATTAACGATGTTT‑CCTCAATATAAAGAAAATAAATCTGACGCGCCGCTGGATATCATCGGCTCTCTCTTGCTTGCAGGCAGCATCGTTTCCATTATCCTGCTGACGAAAAATGa < 6:263484/138‑1 (MQ=255) cTCGCTATTGCTTTTTTTTCGGCTTTTACTTTGTTT‑CATCATTATCAACAAAAATAACCTGCCGCGCCGCTGGATATCATCGGCTCTCTCTTGCTTGCAGGCAGCATCGTTTCCATTATCCTGCTGACGAAAAATGAgg < 4:99247/139‑1 (MQ=255) cTCGCCATTGCTTTTTTTACGGTATTAAGGATGTTT‑CCTAATTATAAAGAATTTAAAGCTGACGCGCCGCTGGATATCATCGGCTCTCTCTTGCTTGCAGGCAGCATCGTTTCCATTATCCTGCTGACGAAAAATGAgg < 8:352250/139‑1 (MQ=255) cTCGCCATTGCTTTATTTACGGCATTAACGATGTTT‑CCTCAATATAAAGAAAATAAATCTGACGCGCCGCTGGATATCATCGGCTCTCTCTTGCTTGCAGGCAGCATCGTTTCCATTATCCTGCTGACGAAAAATGAgg > 6:362221/1‑139 (MQ=255) cGCCATTGCTTTATTTACGGCATTAACGATGTTT‑CCTCAATATAAAGAAAATAAATCTGACGCGCCGCTGGATATCATCGGATCTCTCTTGCTTGCAGGCAGCATCGTTTCCATTAACCTGCTGACGAAAAATGAGTCt > 2:305391/1‑139 (MQ=255) cttttcTTTATTTACGGAATAAACTATGTTT‑CCTAAATATAAATAAAATAAATCTCCCGCGCCGCTGGATATCATCGGCTCTCTCTTGCTTGCAGGCAGCATCGTTTCCATTATCCTGCTGACGAAAAATGAGGCTCCa < 1:116410/134‑1 (MQ=255) cATTGCTTTATTTACGGCATTAACGATGTTT‑CCTCAATATAAAGAAAATAAATCTGACGCGCCGCTGGATATCATCGGCTCTCTCTTGCTTGCAGGCAGCATCGTTTCCATTATCCTGCTGATGAAAAATGAGGCTCCa < 2:265403/139‑1 (MQ=255) cATTGCTTTATTTACGCCATAAACTATGTTT‑CCACAATAAAAACAAAATAAATCTGACGCGCCGCTGGATATCATCGGCTCTCTCTTGCTTGCAGGCAGCATCGTTTCCATTATCCTGCTGACGAAAAATGAGGCTCCa < 5:292199/139‑1 (MQ=255) cATTGCTTTATATCCGCCAAAAACCATGTAT‑CCACAAAAAAAACAAAAAAAATCGCCCGCGCCGCTGGATATCATCGGCTCTCTCTTGCTTGCAGGCAGCATCGTTTCCATTATCCTGCTGACGAAAAATGAGGCTCCa < 6:96659/139‑1 (MQ=255) cATTGATTTATTTACGTATTTAACGTTTTTT‑CCTAAATAAAAATAATATAATTCTCACGCGCCGCTGGATATCATCGGCTCTCTCTTGCTTGCAGGCATCATCGTTTCCATTATCCTGCTGACGAAAAATGAGGCTCCa < 1:305391/139‑1 (MQ=255) aaTTGCTTTATTTACGGCATAAACGATGTTA‑CCAAAATAAAACAAAAAAAAATCTCACGCGCCGCTGGATATCATCGGCTCTCTCTTGCTTGCAGGCAGCATCGTTTCCATTATCCTGCTGACGAAAAATGAGGCTCCa < 7:151285/138‑1 (MQ=255) ttttttttaGGGATTTAACGATGTTT‑CCTAATTATAAATAAAATAAATGTGACGCGCCGCTGGATATCATCGGCTCTCTCTTGCTTGCAGGCAGCATCGTTTCCATTATCCTGCTGACGAAAAATGAGGCTCCATgggg < 4:138140/138‑1 (MQ=255) cTTTATTACCGGCATTACCGATGTTT‑CCTCAATAAAAAGAAAAAAAATCTGACGCGCCGCTGGATATCATCGGCTCTCTCTTGCTTGCAGGCAGCATCGTTTCCATTATCCTGCTGACGCAAAATGAGGCTCCATgggg < 5:105440/139‑1 (MQ=255) tctttaCGGCATTAACGAGTTTT‑CCTAAATATAAAGAAAATAAATCTGCCGCGCCGCTGGATATCATCGGCTCTCTCTTGCTTGCAGGCAGCATCGTTTCCATTATCCTGCTGACGAAAAATGAGGCTCCATGGGGat < 2:113576/136‑1 (MQ=255) tatttaCGTAATTAACGATGTTT‑CCTCAATATAAATAAAATAAATCTCACGCGCCGCTGGATATCATCGGCTCTCTCTTGCTTGCAGGCAGCATCGTTTCCATTATCCTGCTGACGAAATATGAGGCTCCATGGGGat < 3:154455/138‑1 (MQ=255) tatttaCGGCATTAACGATGTTT‑CCTCAATATAAAGAAAATAAATCTGACGCGCCGCTGGATATCATCGGCTCTCTCTTGCTTGCAGGCAGCATCGTTTCCATTATCCTGCTGACGAAAAATGAGGCTCCATGGGGat < 1:2607/138‑1 (MQ=255) tatttaCGGCATTAACGATGTTT‑CCTCAATATAAAGAAAATAAATCTGACGCGCCGCTGGATATCATCGGCTCTCTCTTGCTTGCAGGCAGCATCGTTTCCATTATCCTGCTGACGAAAAATGAGGCTCCATGGGGat < 7:112061/138‑1 (MQ=255) tatttaCGGCATTAACGATGTTT‑CCTCAATATAAAGAAAATAAATCTGACGCGCCGCTGGATATCATCGGCTCTCTCTTGCTTGCAGGCAGCATCGTTTCCATTATCCTGCTGACGAAAAATGAGGCTCCATGGGGat < 8:104604/138‑1 (MQ=255) tatttaCGGCATTAACGATGTTT‑CCTAAATATAAAGAAAATAAATCTGACGCGCCGCTGGATATCATCGGCTCTCTCTTGCTTGCAGGCAGCATCGTTTCCATTATCCTGCTGACGAAAAATGAGGCTCCATGGGGat < 7:207044/138‑1 (MQ=255) tatttaCGGAATTATCTATGTTT‑CTTAAATATAAAGAAAATAAATCTCACGCGCCGCTGGATATCATCGGCTCTCTCTTGCTTGCAGGCAGCATCGTTTCCATTATCCTGCTGACGAAAAATGAGGCTCCATGGGGat < 2:199761/138‑1 (MQ=255) tatttaCGGAATTAACGATGTTT‑CCTCAATATAAATAAAATAAATCTGACGCGCCGCTGGATATCATCGGCTCTCTCTTGCTTGCAGGCAGCATCGTTTCCATTATCCTGCTGACGAAAAATGAGGCTCCATGGGGat < 3:358881/138‑1 (MQ=255) tattaccGGCATTAACGATGTTA‑CCTCAATAAAAAGAAAATAAAGCTCCCGCGCCGCTGGATATCATCGGCTCTCTCTTGCTTGCAGGCAGCATCGTTTCCATTATCCTGCTGACGAAAAATGAGGCTCCATGGGGat < 4:36850/132‑1 (MQ=255) tattaaCGGCATAAACGTTGTTT‑CATAAATATAAATAATAAAATTCTGCCGCGCCGCTGGATATCATCGGCTCTCTCTTGCTTGCAGGCAGCATCGTTTCCATTATCCTGCTGACGAAAAATGAGGCTCCATGGGGat < 2:35921/138‑1 (MQ=255) aatttaCGCCAATACCGATGTTC‑CCGCAAAAAAACCAAAAAAAATCTGCCGCGCCGCTGGATATCATCGGCTCTCTCTTGCTTGCAGGCAGCATCGTTTCCATTATCCTGCTGACGAAAAATGAGGCTCCATGGGGat < 6:16415/137‑1 (MQ=255) tttaCGGCATTAACGATGTTT‑CCTCAATATAAAGAAAATAAATCTGACGCGCCGCTGGATATCATCGGCTCTCTCTTGCTTGCAGGCAGCATCGTTTCCATTATCCTGCTGACGAAAAATGAGGCTCCATGGGGatat < 7:172444/138‑1 (MQ=255) ttaCGGCATTAACGATGTTT‑CCTCATTATAAAGAAAATAAATCTGACGCGCCGCTGGATATCATCGGCTCTCTCTTTCTTGCAGGCAGCATCGTTTCCATTATCCTGCTGACGAAAAATGAGGCTCCATGGGGAtata < 3:349195/138‑1 (MQ=255) ccggatttAACGATGTTT‑CATAAATAAAAACAAAAAAAATCGGACGCGCCGCTGGATATGATCGGCTCTCTCTTGCTTGCAGGCAGCATCGTTTCCATTATCCTGCTGACGAAAAATGAGGCTCCATGGGGATATACt < 6:97696/132‑1 (MQ=255) aCGGCATTAACGATGTTT‑CCTCAATAAAAAGAAAATAAATCTGACGCGCCGCTGGATATCATCGGCTCTCTCTTGCTTGCAGGCAGCATCGTTTCCATTATCCTGCTGACGAAAAATGAGGCTCCATGGGGATATACt < 1:52768/138‑1 (MQ=255) ggCATTAACGATGTTT‑CCTCAATATAAAGAAAATAAATCTGACGCGCCGCTGGATATCATCGGCTCTCTCTTGCTTGCAGGCAGCATCGTTTCCATTATCCTGCTGACGAAAAATGAGGCTCCATGGGGATATACTGta > 3:138140/1‑139 (MQ=255) ggCATTAACGATGTTT‑CCTCAATATAAAGAAAATAAATCTGACGCGCCGCTGGATATCATCGGCTCTCTCTTGCTTGCAGGCAGCATCGTTTCCATTATCCTGCTGACGAAAAATGAGGCTCCATGGGGATATACTGta > 7:96179/1‑139 (MQ=255) ggCATTAACGATGTTT‑CCTCAATATAAAGAAAATAAATCTGACGCGCCGCTGGATATCATCGGCTCTCTCTTGCTTGCAGGCAGCATCGTTTCCATTATCCTGCTGACGAAAAATGAGGATACATGTGGATATACTCta > 3:245713/1‑139 (MQ=255) ctttAACGTTGTTT‑CCTAAATATAAATAAAATAAATCTGACGCGCCGCTGGATATCATCGGCTCTCTCTTGCTTGCAGGCAGCATCGTTTCCATTATCCTGCTGAAGAAAAATGAGGCTCCATGGGGATATACTGtata < 7:255895/137‑1 (MQ=255) cATTAACTATGTTT‑CCTCAATTTAAACAAAATAAATCTGACGCGCCGCTGGATATCATCGGCTCTCTCTTGCTTGCAGGCAGCATCGTTTCCATTATCCTGCTGACGAAAAATGAGGCTCCATGGGGATATACTGtata < 2:339588/139‑1 (MQ=255) cATTAACGATGTTT‑CCTCAATATAAAGAAAATAAATCTGACGCGCCGCTGGATATCATCGGCTCTCTCTTGCTTGCAGGCAGCATCGTTTCCATTATCCTGCTGACGAAAAATGAGGCTCCATGGGGATATACTGtata < 8:173438/139‑1 (MQ=255) cATAAACGATTTTT‑CCTAAATATAAAGAAAATAAATCTGACGCGCCGCTGGATATCATCGGCTCTCTCTTGCTTGCAGGCAGCATCGTTTCCATTATCCTGCTGACGAAAAATGAGGCTCCATGGGGATATACTGtata < 3:256077/139‑1 (MQ=255) aTTAACGATGTTT‑CCTAAATATAAATAAAATAAATGTGCCGCGCCGATGGATATCATCGGCTCTCTCTTGCTTGCAGGCAGCATCGTTTCCATTATCCTGCTGACGAAAAATGAGGCTCCATGGGGATATACTGTATAc < 4:131341/139‑1 (MQ=255) ttAACGATGTTT‑CCTCAATATAAAGAAAATAAATCTGACGCGCCGCTGGATATCATCGGCTCTCTCTTGCTTGCAGGCAGCATCGTTTCCATTATCCTGCTGACGAAAAATGAGGCTCCATGGGGATATACTGTATACa < 8:130987/139‑1 (MQ=255) tataCGATTTTT‑CCTCATTATAAATAAAATAATTCTGACGCGCCGCTTGATATCATCGGCTCTCTCTTGCTTGCAGGCAGCATCGTTTCCATTATCCTGCTGACGAAAAATGAGTCTCCATGGGGATATAATGTATACa < 4:245713/136‑1 (MQ=255) tAACGATGTTT‑CCTCAATATAAAGAAAATAAATCTGACGCGCCGCTGGATATCATCGGCTCTCTCTTGCTTGCAGGCAGCATCGt < 6:314545/85‑1 (MQ=255) tAACGATGTTT‑CCTCAATATAAAGAAAATAAATCTGACGCGCCGCTGGATATCATCGGCTCTCTCTTGCTTGCAGGCAGCATCGTTTCCATTATCCTGCTGACGAAAAATGAGGCTCCa > 7:33847/1‑119 (MQ=255) aaaCGATGTTT‑CCTAAAAATAAAGAAAATAAATCTCCCGCGCCGCTGGATATCATCGGCTCTCTCTTGCTTGCAGGCAGCATCGTTTCCATTATCCTGCTGACGAAAAATGAGGCTCCATGGGGATATACTGTATACAg < 4:17401/138‑1 (MQ=255) gTTT‑CCTCAATATAAAGAAAATAAATCTGACGCGCCGCTGGATATCATCGGCTCTCTCTTGCTTGCAGGCAGCATCGt < 5:98629/78‑1 (MQ=255) gTTT‑CCTCAATATAAAGAAAATAAATCTGACGCGCCGCTGGATATCATCGGCTCTCTCTTGCTTGCAGGCAGCATCGt > 6:98629/1‑78 (MQ=255) gTTT‑CCTCAATATAAAGAAAATAAATCTGACGCGCCGCTGGATATCATCGGCTCTCTCTTGCTTGCAGGCAGCATCGTTTCCATTATCCTGCTGACGAAAAATGAGGCTCCATGGGGat < 3:83957/119‑1 (MQ=255) tt‑CCTAAATATAAATAAAATAAATAGTACGCGCCGCTGGATATCATCGGCTCTCTCTTGCTTGCAGGCAGCATCGTTTCCATTATCCTGCTGACGAAAAATGAGGCTCCATGGGGATATACTGTATACAGTGTATTGa < 6:32156/138‑1 (MQ=255) | TTGGTGCAGCACTCGGGCCTTTTATCGGCTCTATACTGATTGACAGCTTCAGCTGGCATTCGATTTTTTGGGTCAACATCCCGTTCCTCGCCATTGCTTTATTTACGGCATTAACGATGTTT‑CCTCAATATAAAGAAAATAAATCTGACGCGCCGCTGGATATCATCGGCTCTCTCTTGCTTGCAGGCAGCATCGTTTCCATTATCCTGCTGACGAAAAATGAGGCTCCATGGGGATATACTGTATACAGTGTATTGA > CP006881/3437245‑3437502 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |