| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP006881 | 390833 = | 76 (0.720) | 152 (1.430) | 63/252 | 0.1 | 59.1% | coding (3098/10752 nt) | U712_01810 | Surfactin synthase subunit 2 |
| ? | CP006881 | = 1080730 | 134 (1.260) | intergenic (+9/+38) | U712_05320/U712_05325 | Competence transcription factor/putative oxidoreductase yhxD | |||||
Only 100 of 286 total aligned reads displayed.
AGAACCAAATTCCAAGACAGAATCGACCACCGCGTGCCGAAAAGACAGGAATTTATGCTGTACCCGAAAGAAGAGCGGACGAAGATGATTTATGATTTTATTTTGCGTGAGCTCGGGGAACGGTATTAGAAAAATAGGAAGGAGCTGACCGAACAGGGCAGCTCCTTTCATAAAGCTATGCCGTCGGAATTCCTCCGGTGATGCCATATACCTGAGATGTCACATAGCTTGAATTCTCTGAAGCTAGAAATACATAAACATCGGCCAATTCCAC > CP006881/1080593‑1080866 | aaTTCCAAGACAGAATCGACCACCGCGTGCCGAAAAGACAGGAATTTATGCTGTACCCGAAAGAAGAGCGGACGAAGATGATTTATGATTTTATTTTGCGTGAGCTCGGGGAACGGTATTAGAAAAATAGGtgtatttg < 6:81167‑M2/139‑9 (MQ=255) aaTTCCAAGACAGAATCGACCACCGCGTGCCGAAAAGACAGGAATTTATGCTGTACCCGAAAGAAGAGCGGACGAAGATGATTTATGATTTTATTTTGCGTGAGCTCGGGGAACGGTATTAGAAAAATAGGAAGGAGCt > 3:381169/1‑139 (MQ=255) ttCCAAGACAGAATCGACCACCGCGTGCCGAAAAGACAGGAATTTATGCTGTACCCGAAAGAAGAGCGGACGAAGATGATTTATGATTTTATTTTGCGTGAGCTCGGGGAACGGTATTAGAAAAATAGGAAGGAGCTGa < 7:75407/139‑1 (MQ=255) aaacacAAGCGACCACCGCGTGCCGAAAAGACAGTAATTTATGCTGTACCCGAAAGCAGCGCGGACGAAGATGATTTATGATTTTATTTTGCGGGAGCTCGGGGAACGGTATTAGAAAAATAGGAAGGAGCTGACCGaa < 8:191367/137‑1 (MQ=255) aCAGAATCGACCACCGCGTGCCGAAAAGACAGGAATTTATGCTGTACCCGAAAGAAGAGCGGACGAAGATGATTTATGATTTTATTTTGCGTGAGCTCGGGGAACGGTATTAGAAAAATAGGtgtatttggaagagaac > 8:81525‑M2/1‑122 (MQ=255) gAATCGACCACCGCGTGCCGAAAAGACAGGAATTTATGCTGTACCCGAAAGAAGAGCGGACGAAGATGATTTATGATTTTATTTTGCGTGAGCTCGGGGAACGGTATTAGAAAAATAGGtgtatttggaagagaacgaa > 5:467344‑M2/1‑119 (MQ=255) aaTCGACCACCGCGTGCCGAAAAGACAGGAATTTATGCTGTACCCGAAAGAAGAGCGGACGAAGATGATTTATGATTTTATTTTGCGTGAGCTCGGGGAACGGTATTAGAAAAATAGGtgtatttggaagagtacga < 2:198134‑M2/137‑20 (MQ=255) aaTCGACCACCGCGTGCCGAAAAGACAGGAATTTATGCTGTACCCGAAAGAAGAGCGGACGAAGATGATTTATGATTTTATTTTGCGTGAGCTCGGGGAACGGTATTAGAAAAATAGGtgtatttggaagagaacga < 8:226019‑M2/137‑20 (MQ=255) aaTCGACCACCGCGTGCCGAAAAGACAGGAATTTATGCTGTACCCGAAAGAAGAGCGGACGAAGATGATTTATGATTTTATTTTGCGTGAGCTCGGGGAACGGTATTAGAAAAATAGGtgtatttggaagagaacga < 6:210270‑M2/137‑20 (MQ=255) aaTCGACCACCGCGTGCCGAAAAGACAGGAATTTATGCTGTACCCGAAAGAAGAGCGGACGAAGATGATTTATGATTTTATTTTGCGTGAGCTCGGGGAACGGTATTAGAAAAATAGGAAGGAGCTGACCGAACAggg > 8:76204/1‑138 (MQ=255) gACCACCGCGTGCCGAAAAGACAGGAATTTATGCTGTACCCGAAAGAAGAGCGGACGAAGTTGATTTATGATTTTATTTTGCGTGAGCTCGGGGAACGGTATTAGAAAAATAGGAAGGAGCTGACCGAACAGGGCAg < 4:258920/137‑1 (MQ=255) accaccGCGTGCCGAAAAGACAGGAATTTATGCTGTACCCGAAAGAAGAGCGGACGAAGATGATTTATGATTTTATTTTGCGTGAGCTCGGGGAACGGTATTAGAAAAATAGGtgtatttggaagagaacgaaagcaag < 5:343886‑M2/139‑27 (MQ=255) accaccGCGTGCCGAAAAGACAGGAATTTATGCTGTACCCGAAAGAAGAGCGGACGAAGATGATTTATGATTTTATTTTGCGTGAGCTCGGGGAACGGTATTAGAAAAATAGGAAGGAGCTGACCGAACAGGGCAGCTc > 1:326206/1‑139 (MQ=255) ccaccGCGTGCCGAAAAGACAGGAATTTATGCTGTACCCGAAAGAAGAGCGGACGAAGATGATTTATGATTTTATTTTGCGTGAGCTCGGGGAACGGTATTAGAAAAATAGGAAGGAGCTGACCGAACAGGGCAGCTcc < 7:27740/139‑1 (MQ=255) cgcgTGCCGAAAAGACAGGAATTTATGCTGTACCCGAAAGAAGAGCGGACGAAGATGATTTATGATTTTATTTTGCGTGAGCTCGGGGAACGGTATTAGAAAAATAGGtgtatttggaagagaacgaaagcaaggag < 8:174162‑M2/137‑30 (MQ=255) gcgTGCCGAAAAGACAGGAATTTATGCTGTACCCGAAAGAAGAGCGGACGAAGATGATTTATGATTTTATTTTGCGTGAGCTCGGGGAACGGTATTAGAAAAATAGGAAGGAGCTGACCGAACAGGGCAGCTCCTTTCa < 1:48216/139‑1 (MQ=255) gcgTGCCGAAAAGACAGGAATTTATGCTGTACCCGAAAGAAGAGCGGACGAAGATGATTTATGATTTTATTTTGCATGAGCTCGGGGAACGGTATTAGAAAAATAGGtgtatttggaagagaacgaaagcaaggaggag > 6:234817‑M2/1‑107 (MQ=255) cgTGCCGAAAAGACAGGAATTTATGCTGTACCCGAAAGAAGAGCGGACGAAGATGATTTATGATTTTATTTTGCGTGAGCTCGGGGAACGGTATTAGAAAAATAGGAAGGAGCTGACCGAACAGGGCAGCTCCTTTCa > 7:384276/1‑138 (MQ=255) gTGCCGAAAAGACAGGAATTTATGCTGTACCCGAAAGAAGAGCGGACGAAGATGATTTATGATTTTATTTTGCGTGAGCTCGGGGAACGGTATTAGAAAAATAGGtgtatttggaagagaacgaaagcaaggaggagca > 1:214838‑M2/1‑105 (MQ=255) gTGCCGAAAAGACAGGAATTTATGCTGTACCCGAAAGAAGAGCGGACGAAGATGATTTATGATTTTATTTTGCGTGAGCTCGGGGAACGGTATTAGAAAAATAGGtgtatttggaagagaacgaaagcaaggaggagca > 6:164756‑M2/1‑105 (MQ=255) gAAAAGACAGTAATTTATGCTGTACCCGAAAGTAGAGCGGACGAAGATGATTTATGATTTTATTTTGCGTGAGCTCGGGGAACGGTATTAGAAAAATAGGtgtatttggaagagaacgaaagcaaggaggagcagacgt > 1:123133‑M2/1‑100 (MQ=255) ggAATTTATGCTGTACCCGAAAGAAGAGCGGACGAAGATGATTTATGATTTTATTTTGCGTGAGCTCGGGGAACGGTATTAGAAAAATAGGAAGGAGCTGa < 6:130011/101‑1 (MQ=255) ggAATTTATGCTGTACCCGAAAGAAGAGCGGACGAAGATGATTTATGATTTTATTTTGCGTGAGCTCGGGGAACGGTATTAGAAAAATAGGAAGGAGCTGa > 5:130011/1‑101 (MQ=255) gAATTTATGCTGTACCCGAAAGAAGAGCGGACGAAGATGATTTATGATTTTATTTTGCGTGAGCTCGGGGAACGGTATTAGAAAAATAGGtgtatttggaagagaacgaaagcaaggaggagcagacgtttgaaccgat > 1:29113‑M2/1‑90 (MQ=255) gAATTTATGCTGTACCCGAAAGAAGAGCGGACGAAGATGATTTATGATTTTATTTTGCGTGAGCTCGGGGAACGGTATTAGAAAAATAGGtgtatttggaagagaacgaaagcaaggaggagcagacgtttgaaccgat > 5:312381‑M2/1‑90 (MQ=255) aTTTATGCTGTACCCGAAAGAAGAGCGGACGAAGATGATTTATGATTTTATTTTGCGTGAGCTCGGGGAACGGTATTAGAAAAATAGGAAGGAGCTGACCGAACAGGGCAGCTCCTTTCATAAAGCTATGCCGTCGGaa < 4:311091/139‑1 (MQ=255) aTGCTGTACCCGAAAGAAGAGCGGACGAAGATGATTTATGATTTTATTTTGCGTGAGCTCGGGGAACGGTATTAGAAAAATAGGtgtatttggaagagaacgaaagcaaggaggagcagacgtttgaaccgatcaggc < 6:273119‑M2/138‑55 (MQ=255) tGCTGTACCCGAAAGAAGAGCGGACGAAGATGATTTATGATTTTATTTTGCGTGAGCTCGGGGAACGGTATTAGAAAAATAGGtgtatttggaagagaacgaaagcaaggaggagcagacgtttgaaccgatcaggca > 4:424916‑M2/1‑83 (MQ=255) gCTGTACCCGAAAGAAGAGCGGACGAAGATGATTTATGATTTTATTTTGCGTGAGCTCGGGGAACGGTATTAGAAAAATAGGAAGGAGCTGACCGAACAGGGCAGCTCCTTTCATAAAGCTATGCCGTCGGAATtcctc > 4:326844/1‑139 (MQ=255) gTACCCGAAAGAAGAGCGGACGAAGATGATTTATGATTTTATTTTGCGTGAGCTCGGGGAACGGTATTAGAAAAATAGGAAGGAGCTGACCGAACAGGGCAGCTCCTTTCATAAAGCTATGCCGTCGGaa < 7:149808/130‑1 (MQ=255) gTACCCGAAAGAAGAGCGGACGAAGATGATTTATGATTTTATTTTGCGTGAGCTCGGGGAACGGTATTAGAAAAATAGGAAGGAGCTGACCGAACAGGGCAGCTCCTTTCATAAAGCTATGCCGTCGGAATTCCTCCgg > 1:234126/1‑139 (MQ=255) gTACACGAAAGAAGAGCGGACGAAGATGATTTATGATTTTATTTTGCGTGAGCTCGGGGAACGGTATTAGAAAAATAGGAAGGAGCTGACAGAACAGGGCAGCTCCTTTCATAACGCTATGCCGTCGGAATTCCTCCgg > 5:188579/1‑139 (MQ=255) tACCCTAAAGAAGAGCGTCCGAAGATGATTTATGATTTTATTTTCCGTGACAACGGGGAACGTTATTATAAAAATAGCAAGATCTTGACCGAACCGGGCAGAGCATTACAAAAACCTATGCCGTGGGAATTCATCgggg > 6:313342/1‑138 (MQ=255) tACCCGAAAGAAGAGCGGACGAAGATGATTTATGATTTTATTTTGCGTGAGCTCGGGGAACGGTATTAGAAAATTAGGAAGGAGCTGACCGAACAGGGCAGCTCCTTTCATAAAGCTATGCCGTCGGAATTCCTCCGGt > 5:102442/1‑139 (MQ=255) tACCCGAAAGAAGAGCGGACGAAGATGATTTATGATTTTATTTTGCGTGAGCTCGGGGAACGGTATTAGAAAAATAGGtgtatttggaagagaacgaaagcaaggaggagcagacgtttgaaccgatcaggcaagaatc < 3:421243‑M2/139‑62 (MQ=255) tACCCGAAAGAAGAGCGGACGAAGATGATTTATGATTTTATTTTGCGTGAGCTCGGGGAACGGTATTAGAAAAATAGGAAGGAGCTGACCGAACAGGGCAGCTCCTTTCATAAAGCTATGCCGTCGGAATTCCTCCGGt > 1:179546/1‑139 (MQ=255) tACCCGAAAGAAGAGCGGACGAAGATGATTTATGATTTTATTTTGCGTGAGCTCGGGGAACGGTATTAGAAAAATAGGAAGGAGCTGACCGAACAGGCCAGCTCCTTTCATAAAGCTATGACTACTGAATTCCTCCGGt > 8:142635/1‑139 (MQ=255) aCCCGAAAGAAGAGCGGACGAAGATGATTTATGATTTTATTTTGCGTGAGCTCGGGGAACGGTATTAGAAAAATAGGAAGGAGCTGACCGAACAGGGCAGCTCCTTTCATAAAGCTATGCCGTCGGAATTCCTCCGGTg < 1:117150/139‑1 (MQ=255) cccGAAAGAAGAGCGGACGAAGATGATTTATGATTTTATTTTGCGTGAGCTCGGGGAACGGTATTAGAAAAATAGGtgtatttggaagagaacgaaagcaaggaggagcagacgtttgaaccgatcaggcaagcatctt > 5:395719‑M2/1‑76 (MQ=255) cGAAAGACGAGCGGACGAAGATGATTTATGATTTTATTTTGCGTGAGCTCGGGGAACGGTATTAGAAAAATAGGAAGGAGCTGACCGAACAGGGCAGCTCCTTTCATAAAGCTATGCCGTCGGAATTCCTCCGGTGATg < 5:64281/139‑1 (MQ=255) cGAAAGAAGAGCGGACGACGATGTTTTATGATTTTATTTTGCGGGAGCTCGGGGAACGGTATTAGAAAAATAGGAAGGAGCTGACCGAACAGGGCAGCTCCTTTCATAAAGCTATGCCGTCGGAATTCCTCCGGTGATg < 4:102724/139‑1 (MQ=255) cGAAAGAAGAGCGGACGAAGATGATTTATGATTTTATTTTGCGTGAGCTCGGGGAACGGTATTAGAAAAATAGGAAGGAGCTGACCGAACAGGGCAGCTCCTTTCATAAAGCTATGCCGTCGGAATTCCTCCGGTGATg < 2:269420/139‑1 (MQ=255) aaaGAAGAGCGGACGAAGATGATTTATGATTTTATTTTGCGTGAGCTCGGGGAACGGTATTAGAAAAATAGGAAGGAGCTGACCGAACAGGGCAGCTCCTTTCATAAAGCTATGCCGTCGGAATTCCTCCGGTGATGcc < 6:352536/139‑1 (MQ=255) aagaagAGCGGACGAAGATGATTTATGATTTTATTTTGCGTGAGCTCGGGGAACGGTATTAGAAAAATAGGtgtatttggaagagaacgaaagcaaggaggagcagacgtttgaaccgatcaggcaagcatcttatcag > 6:106443‑M2/1‑71 (MQ=255) aagaagAGCGGACGAAGATGATTTATGATTTTATTTTGCGTGAGCTCGGGGAACGGTATTAGAAAAATAGGtgtatttggaagagaacgaaagcaaggaggagcagacgtttgaaccgatcaggcaagcatcttatcag > 7:443558‑M2/1‑71 (MQ=255) aagaagAGCGGACGAAGATGATTTATGATTTTATTTTGCGTGAGCTCGGGGAACGGTATTAGAAAAATAGGAAGGAGCTGACCGAACAGGGCAGCTCCTTTCATAAAGCTATGCCGTCGGAATTCCTCCGGTGATGcc < 8:384276/138‑1 (MQ=255) aagaagAGCGGACGAAGATGATTTATGATTTTATTTTGCGTGAGCTCGGGGAACGGTATTAGAAAAATAGGAAGGAGCTGACCGAACAGGGCAGCTCCTTTCATAAAGCTATGCCGTCGGAATTCCTCCGGTGATGCCa < 7:209735/139‑1 (MQ=255) gaagaGCGGACGAAGATGATTTATGATTTTATTTTGCGTGAGCTCGGGGAACGGTATTAGAAAAATAGGtgtatttgtaagagaacgaaagcaaggaggagcagacgtttgaaccgatcaggcaagcatcttatcagca > 2:139790‑M2/1‑69 (MQ=255) gaagaGCGGACGAAGATGATTTATGATTTTATTGTGCGTGAGCTCGGGGAACGGTATTAGAAAAATAGGAAGGAGCTGACCGAACAGGGCAGCTCCTTTCATAAAGCTATGCCGTCGGAATTCCTCCGGTGATGCCata < 6:220909/139‑1 (MQ=255) aagaGCGGACGAAGATGATTTATGATTTTATTTTGCGTGAGCTCGGGGAACGGTATTAGAAAAATAGGtgtatttggaagagaacgaaagcaaggaggagca > 7:3093‑M2/1‑68 (MQ=255) gagCGGACGAAGATGATTTATGATTTTATTTTGCGTGAGCTCGGGGAACGGTATTAGAAAAATAGGtgtatttggaagagaacgaaagcaaggaggagcagacgtttgaaccgatcaggcaagcatcttatcagcagca > 4:194060‑M2/1‑66 (MQ=255) agCGGACGAAGATGATTTATGATTTTATTTTGCGTGAGCTCGGGGAACGGTATTAGAAAAATAGGtgtatttggaagagaacgaaagcaaggaggagcagacgtttgaaccgatcaggcaagcatcttatcagcagcat < 5:156414‑M2/139‑75 (MQ=255) agCGGACGAAGATGATTTATGATTTTATTTTGCGTGAGCTCGGGGAACGGTATTAGAAAAATAGGtgtatttggaagagaacgaaagcaaggaggagcagacgtttgaaccgatc > 6:408487‑M2/1‑65 (MQ=255) agCGGACGAAGATGATTTATGATTTTATTTTGCGTGAGCTCGGGGAACGGTATTAGAAAAATAGGtgtatttggaagagaacgaaagcaaggaggagca < 1:100008‑M2/99‑35 (MQ=255) agCGGACGAAGATGATTTATGATTTTATTTTGCGTGAGCTCGGGGAACGGTATTAGAAAAATAGGtgtatttggaagagaacgaaagcaaggaggagca > 2:100008‑M2/1‑65 (MQ=255) agCGGACGAAGATGATTTATGATTTTATTTTGCGTGAGCTCGGGGAACGGTATTAGAAAAATAGGAAGGAGCTGACCGAACAGGGCAGCTCCTTTCATAAAGCTATGCCGTCGGAATTCCTCCGGTGATGCCATATAcc < 1:34091/139‑1 (MQ=255) gCGGACGAAGATGATTTATGATTTTATTTTGCGTGAGCTCGGGGAACGGTATTAGAAAAATAGGtgtatttggaagagaacgaaagcaaggaggagcagacgtttgaaccgatcaggcaagcatcttatcagcagcatt > 3:51816‑M2/1‑64 (MQ=255) cGGACGTAGATGATTTTTGATTTTATTTTGCGTGAGATCGGGGAACGGTATTAGAAAAATAGGAAGGAGCTGACCGAACAGGGCAGCTCCTTTCATAAAGCTATGCCGTAGGAATTCCTCCGGTGATGCCATATACCTg < 2:80662/139‑1 (MQ=255) ggACGAAGATGATTTATGATTTTATTTTGCGTGAGCTCGGGGAACGGTATTAGAAAAATAGGtgtatttggaagagaacgaaagcaaggaggagcagacgtttgaaccgatcaggcaagcatcttatcagcagcattat > 1:298280‑M2/1‑62 (MQ=255) gACGAAGATGATTTATGATTTTATTTTGAGTGAGCTCGGGGAACGATATTAGAAAAATAGGtgtatttggaagagaacgaaagcaaggaggagcagacgtttgcaccgatcaggcaagcatcttatcagcagcattatc < 4:161408‑M2/139‑79 (MQ=255) atttatgatttTATTTTGCGTGAGCTCGGGGAACGGTATTAGAAAAATAGGtgtatttggaagagaacgaaagcaaggaggagcagacgtttgaaccgatcaggcaagcatcttatcagcagcattatcctgtatccc > 2:222314‑M2/1‑51 (MQ=255) atttatgatttTATTTTGCGTGAGCTCGGGGAACGGTATTAGAAAAATAGGtgtatttggaagagaacgaaagcaaggaggagcagacgtttgaaccgatcaggcaagcatcttatcagcagcattatcctgtatccc > 3:134638‑M2/1‑51 (MQ=255) atttatgatttTATTTTGCGTGAGCTCGGGGAACGGTATTAGAAAAATAGGAAGGAGCTGACCGAACAGGGCAGCTCCTTTCATAAAGCTATGCCGTCGGAATTCCTCCGGTGATGCCATATACCTGAGATGTCACAt < 2:179546/138‑1 (MQ=255) tttatgatttTATTTTGCGTGAGCTCGGGGAACGGTATTAGAAAAATAGGtgtatttggaagagaacgaaagcaaggaggagcagacgtttgaaccgatcaggcaagcatcttatcagcagca < 3:278623‑M2/123‑74 (MQ=255) tgatttTATTTTGCGTGAGCTCGGGGAACGGTATTAGAAAAATAGGtgtatttggaagagaacgaaagcaaggaggagcagacgtttgaaccgatcaggcaagcatcttatcagcagcattatcctgtatccccggcc > 8:269685‑M2/1‑46 (MQ=255) ttattttGCGTGAGCTCGGGGAACGGTATTAGAAAAATAGGtgtatttggaagagaacgaaagcaaggaggagcagacgtttgaaccgatcaggcaagcatcttatcagcagcattatcctgtatccccggcccagcg > 2:340091‑M2/1‑41 (MQ=255) ttattttGCGTGAGCTCGGGGAACGGTATTAGAAAAATAGGAAGGAGCTGACCGAACAGGGCAGCTCCTTTCATAAAGCTATGCCGTCGGAATTCCTCCGGTGATGCCATATACCTGAGATGTCACATAGCTTGAATtc > 8:57224/1‑139 (MQ=255) ttttGCGTGAGCTCGGGGAACGGTATTAGAAAAATAGGtgtatttggaagagaacgaaagcaaggaggagcagacgtttgaaccgatcaggcaagcatcttatcagcagcattatcctgtatccccggcccagcggag > 1:61361‑M2/1‑38 (MQ=255) ttGCGTGAGCTCGGGGAACGGTATTAGAAAAATAGGAAGGAGCTGACCGAACAGGGCAGCTCCTTTCATAAAGCTATGCCGTCGGAATTCCTCCGGTGATGCCATATACCTGAGATGTCACATAGCTTGAATTCTCTg < 3:182039/138‑1 (MQ=255) cGTGAGCTCGGGGAACGGTATTAGAAAAATAGGtgtatttggaagagaacgaaagcaaggaggagcagacgtttgaaccgatcaggcaagcatcttatcagcagcattatcctgtatccccggcccagcggagaatgta < 3:214160‑M2/139‑107 (MQ=255) cGTGAGCTCGGGGAACGGTATTAGAAAAATAGGtgtatttggaagagaacgaaagcaaggaggagcagacgtttgaaccgatcaggcaagcatcttatcagcagcatt > 3:114441‑M2/1‑33 (MQ=255) cGTGAGCTCGGGGAACGGTATTAGAAAAATAGGtgtatttggaagagaacgaaagcaaggaggagcagacgtttgaaccgatcaggcaagcatcttatcagcagcatt < 4:114441‑M2/108‑76 (MQ=255) cGTGAGCTCGGGGAACGATATTAGAAAAATAGGtgtatttggaagagaacgaaagcaaggaggagcagacgtttgaaccgatcaggcaagcatcttatcagcagcattatcctgtatccccggcccagcggagaatgta > 3:161408‑M2/1‑33 (MQ=255) aGCTCGGGGAACGGTATTAGAAAAATAGGtgtatttggaagagaacgaaagcaaggaggagcagacgtttgaaccgatcaggcaagcatcttatcagcagcattatcctgtatccccggcccagcggagaatgtatatc > 5:232652‑M2/1‑29 (MQ=255) aGCTCGGGGAACGGTATTAGAAAAATAGGAAGGAGCTGACCGAACAGGGCAGCTCCTTTCATAAAGCTATGCCGTCGGAATTCCTCCGTTGATGCCATATACCTGAGATGTCACATAGCTTGAATTCTCTGAAGCTAGa < 5:210066/139‑1 (MQ=255) gCTCGGGGAACGGTATTAGAAAAATAGGtgtatttggaagagaacgaaagcaaggaggagcagacgtttgaaccgatcaggcaagcatcttatcagcagcattatcctgtatccccggcccagcggagaatgtatatcc < 1:427556‑M2/139‑112 (MQ=255) cTCGGGGAACGGTATTAGAAAAATAGGAAGGAGCTGACCGAACAGGGCAGCTCCTTTCATAAAGCTATGCCGTCGGAATTCCTCCGGTGATGCCATATACCTGAGATGTCACATAGCTTGAATTCTCTGAAGCTAGaaa < 3:326844/139‑1 (MQ=255) cTCGGGGAACGGTATTAGAAAAATAGGAAGGAGCTGACCGAACAGGGCAGCTCCTTTCATAAAGCTATGCCGTCGGAATTCCTCCGGTGATGCCATATACCTGAGATGTCACATAGCTTGAATTCTCTGAAGCTAGaaa < 7:139787/139‑1 (MQ=255) cTCGGGGAACGGTATTAGAAAAATAGGAAGGAGCTGACCGAACAGGGCAGCTCCTTTCATAAAGCTATGCCGTCGGAATTCCTCCGGTGATGCCATATACCTGAGATGTCACATAGCTTGAATTCTCTGAAGCTAGaaa < 4:381169/139‑1 (MQ=255) cTCGGGGAACGGTATTAGAAAAATAGGAAGGAGCTGACCGAACAGGGCAGCTCCTTTCATAAAGCTATGCCGTCGGAATTCCTCCGGTGATGCCATATACCTGAGATGTCACATAGCTTGAATTCTCTGAAGCTAGaaa < 4:4803/139‑1 (MQ=255) cTCGGGGAACGGTATTAGAAAAATAGGAAGGAGCTGACCGAACAGGGCAGCTCCTTTCATAAAGCTATGCCGTCGGAATTCCTCCGGTGATGCCATATACCTGAGATGTAACATAGCTTGAATTCTCTGATGCTAGaaa < 6:194335/139‑1 (MQ=255) aaCGGTATTACAAAAATAGCAAGCAGCTGACCTAACAGGGCAGCTCCTTTCATAAAGCTATGCCGTCGGAATTCCTCCGGTGATGCCATATACCTGAGATGTCACATAGCTTGAATTCTCTGAAGCTAGAAATACATa < 7:400575/138‑1 (MQ=255) ggTATTAGAAAAATAGGAAGGAGCTGACCGAACAGGGCAGCTCCTTTCATAAAGCTATGCCGTCGGAATTCCTCCGGTGATGCCATATACCTGAGATGTCACATAGCTTGAATTCTCTGAAGCTAGAAATACATAAACa < 2:326206/139‑1 (MQ=255) aTTAGAAAAATAGGAAGGAGCTGACCGAACAGGGCAGCTCCTTTCATAAAGCTATGCCGTCGGAATTACTCCGGTGATGCCATATACCTGAGATGTCACATAGCTTGAATTCTCTg > 2:296034/1‑116 (MQ=255) ttAGAAAAATAGGtgtatttggaagagaacgaaagcaaggaggagcagacgtttgaaccgatcaggcaagcatcttatcagcagcattatcctgtatccccggcccagcggagaatgtatatcctcaatcagcttgga > 2:381918‑M2/1‑13 (MQ=255) gAAAAATAGGAAGGAGCTGACCGAACAGGGCAGCTCCTTTCATAAAGCTATGCCGTCGGAATTCCTCCGGGGAGGCCATATACCTGAGATGTCACATAGCTTGAATTCTCTGAAGCTAGAAATACATAAACCTCGGcc > 3:353263/1‑138 (MQ=255) aaaTAGGtgtatttggaagagaacgaaagcaaggaggagcagacgtttgaaccgatcaggcaagcatcttatcagcagcattatcctgtatccccggcccagcggagaatgtatatcctcaatcagcttggacaagcaa > 8:282412‑M2/1‑7 (MQ=255) aaTAGGtgtatttggaagagaacgaaagcaaggaggagcagacgtttgaaccgatcaggcaagcatcttatcagcagcattatcctgtatccccggcccagcggag < 1:384407‑M2/106‑101 (MQ=255) aTAGGtgtatttggaagagaacgaaagcaaggaggagcagacgtttgaaccgatcaggcaagcatcttatcagcagcattatcctgtatccccggcccagcggagaatgtatatcctcaatcagcttggacaagcaaa < 4:118274‑M2/138‑134 (MQ=255) aTAGGtgtatttggaagagaacgaaagcaaggaggagcagacgtttgaaccgatcaggcaagcatcttatcagcagcattatcctgtatccccggcccagcggagaatgtatatcctcaatcagcttgga > 7:263270‑M2/1‑5 (MQ=255) aTAGGtgtatttggaagagaacgaaagcaaggaggagcagacgtttgaaccgatcaggcaagcatcttatcagcagcattatcctgtatccccggcccagcggagaatgtatatcctcaat > 3:60164‑M2/1‑5 (MQ=255) aTAGGtgtatttggaagagaacgaaagcaaggaggagcagacgtttgaaccgatcaggcaagcatcttatcagcagcattatcctgtatccccggcccagcg < 7:411649‑M2/102‑98 (MQ=255) aTAGGtgtatttggaagagaacgaaagcaaggaggagcagacgtttgaaccgatcaggcaagcatcttatcagcagcattatcctgtatccccggcccagcg > 8:411649‑M2/1‑5 (MQ=255) aTAGGtgtatttggaagagaacgaaagcaaggaggagcagacgtttgaaccgatcaggcaagcatcttatcagcagcattatcctgtatccc > 5:96983‑M2/1‑5 (MQ=255) aTAGGAAGGAGCTGACCGAACAGGGCAGCTCCTTTCATAAAGCTATGCCGTCGGAATTCCTCCGGTg < 1:303367/67‑1 (MQ=255) aTAGGAAGGAGCTGACCGAACAGGGCAGCTCCTTTCATAAAGCTATGCCGTCGGAATTCCTCCGGTg > 2:303367/1‑67 (MQ=255) aTAGGAAGGAGCTGACCGAACAGGGCAGCTCCTTTCATAAAGCTATGCCGTCGGAATTCCTCCGGTGATGCCATATACCTGAGATGTCACATAGCTTGAATTCTCTGAAGCTAGAAATACATAAACATCGGCCAATTcc > 2:47856/1‑139 (MQ=255) tAGGtgtatttggaagagaacgaaagcaaggaggagcagaagtgtgaaccgatcaggcaagcatcttatcagcagcattatcctgtatccccggcccagctgagaatgtatatcctcaatcagcttggacaagcaaaca > 3:95739‑M2/1‑4 (MQ=255) tcgtgtatttggaagagcacgaaagcaaggaggagcagacgtttgaaccgatcaggcaagcagcttatcagcagcattatcctgtatccccggcccagcggagaatgtatatcctcaatcagcttggacaagcaaacac > 6:150475‑M2/3‑3 (MQ=255) ggtgtatttggaagagaacgaaagcaaggaggagcagacgtttgaaccgatcaggcaagcatcttatcagcagcattatcctgtatccccggcccagcggagaatgtatatcctcaatcagcttggacaagcaaacac > 5:273119‑M2/1‑2 (MQ=255) | AGAACCAAATTCCAAGACAGAATCGACCACCGCGTGCCGAAAAGACAGGAATTTATGCTGTACCCGAAAGAAGAGCGGACGAAGATGATTTATGATTTTATTTTGCGTGAGCTCGGGGAACGGTATTAGAAAAATAGGAAGGAGCTGACCGAACAGGGCAGCTCCTTTCATAAAGCTATGCCGTCGGAATTCCTCCGGTGATGCCATATACCTGAGATGTCACATAGCTTGAATTCTCTGAAGCTAGAAATACATAAACATCGGCCAATTCCAC > CP006881/1080593‑1080866 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |