| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP006881 | 3,905,563 | G→T | 12.6% | D86Y (GAT→TAT) | U712_20135 → | Uncharacterized protein yxcD |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 3,905,563 | 0 | G | T | 12.6% | 152.6 / 3.2 | 88 | D86Y (GAT→TAT) | U712_20135 | Uncharacterized protein yxcD |
| Reads supporting (aligned to +/- strand): ref base G (43/32); new base T (8/4); total (51/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.54e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TCTTCGCTGAAGCTACATTTGGCCTGCACCACAAGCAGCTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGTAAGGTTTTTTTAATGGTTTCTCTGAGCATAAAGTTATTTCGTTTT > CP006881/3905432‑3905694 | tcttcGCTGAAGCTACATTTGGCCTGCACCACAAGCAGCTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGa > 8:100552/1‑138 (MQ=255) cttcGCTGAAGCTACATTTGGCCTGCACCACAAGCAGCTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGaa > 5:173299/1‑138 (MQ=255) ttcGCTGAAGCTACATTTGGCCTGCACCACAAGCAGCTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGGCATATGATAATaaa > 5:411488/1‑138 (MQ=255) ttcGCTGAAGCTACATTTGGCCTGCACCACAAGCAGCTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGaaa > 4:22963/1‑138 (MQ=255) ttcGCTGAAGCTACATTTGGCCTGCACCACAAGCAGCTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGaaa > 8:282495/1‑138 (MQ=255) gCTGAAGCTACATTTGGCCTGCACCACAAGCAGCTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGaaaaaa < 6:73658/138‑1 (MQ=255) aaGCTACATTTGGCCTGCACCACAAGCAGCTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCt > 7:114167/1‑138 (MQ=255) ggCCTGCACCACAAGCAGCTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTgg > 7:195545/1‑139 (MQ=255) gCCTGCACCACAAGCAGCTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGt > 1:296575/1‑139 (MQ=255) caccacAAGCAGCTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGTATTGCAATTTTTTAAGAAAAAAGGCGTATCCGGCTTGGTTTTTg > 7:163154/1‑139 (MQ=255) caccacAAGCAGCTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTTCAATTTTATAAGAAAAAAGGCGTGTCCGCCGTGGTTTTTg > 5:251167/1‑139 (MQ=255) caccacAAGCAGCTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGGAATTTGATAAGAAAAAAGGCTTCTCCGGCGTGGGTTTTg > 5:130902/1‑139 (MQ=255) caccacAAGCAGCTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTTATAAGAAAAAAGGCTTATCCGCCTTGGTTTTTg > 3:17247/1‑139 (MQ=255) caccacAAGCAGCTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCGCCGTTGGTTTTTg > 7:13705/1‑139 (MQ=255) caccacAAGCAGCTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCGTGGTTTTTg > 7:395507/1‑139 (MQ=255) caccacAAGCAGCTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTATCCGCCTTGGTTTTTg > 7:392398/1‑139 (MQ=255) caccacAAGCAGCTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTGGAATTGGAATTTTTTAAGAAAAAAGGCTTGTCCGCCGTGGGTTTTg > 1:363866/1‑139 (MQ=255) agcTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCTGACGTTACCGTCGTGGTATTTCAATTTTATAAGAAAAAAAGCTTCTACGCCATGGTTTTTGTCaaacaag > 5:319178/1‑133 (MQ=255) cTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACg < 5:67462/133‑1 (MQ=255) cTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACg > 6:67462/1‑133 (MQ=255) aTGTCATTTGACATTTAACAAGGCATTATTACGTTCTAAGAGGAATACCACACCTACAATCCGGACGTTACCTTGGTTGATTTGAATTTTTATAAGAAAAACGGCTTCTCCGCCTTGGTTTTTGTCAACGTAGCagaa < 4:280822/138‑1 (MQ=255) aTGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTTAATAGCAATTTGATAAGAAAAAAGGCTTCTACGCCTTGGTTTTTGTCAACGAAGCag > 1:215069/1‑136 (MQ=255) aTGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGTATTGCAATTTTATAACAAAAAAGGGGTCTCCGCCGTGGTTTTTGTCACCGAAGCataagacaaaa > 7:215829/1‑133 (MQ=255) aTGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTTATAAGAAAAAAGGCTTCTCCGCCt > 1:52865/1‑108 (MQ=255) aTGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATTAGAAAAAAGGGTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATaaa > 5:353926/1‑138 (MQ=255) aTGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTGCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATaaa > 7:253289/1‑138 (MQ=255) aTGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCt < 2:52865/108‑1 (MQ=255) aTGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGTGTTTTTTCAAAGAAGCAGAAGAATaaa > 8:280712/1‑138 (MQ=255) aTGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATaaaa < 7:392627/139‑1 (MQ=255) tGAAATTTCAGAAGGCATTATTCAGTACTTAGAGGAAAACCACAACTTCAATCCGCACGTTCCCGTCGTGGAATTCCAATTTGAAAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATaaaa < 4:87409/138‑1 (MQ=255) aTTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAAATTTATAAGAAAAAAAGCTTCTCCGCCGTGGTTTTTGTCAACGAAGCAGAACAATAAAAATTTc > 2:404139/1‑139 (MQ=255) aTTTCACAACGCATTATTCAGTTCTTATCTGAAAACCCAAAATTCAATCCGGTCGGTACCGTCGTTTAATTGCAATTTGAAAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTc < 7:38573/139‑1 (MQ=255) ttCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCt > 5:193941/1‑138 (MQ=255) ttaGGCATTATTCATTTCTTAGAGTAATACCACAACTTCAATCCGGAGGTTACCGTTTTTGAATTTCAATTTGATAATAAAAAAGTCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATc < 4:152813/137‑1 (MQ=255) gacggCATTATTGAGTTCTATGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTTAATTGAAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATc < 6:411488/136‑1 (MQ=255) gAAGGCATTTTTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTTAATTGCAATTTGATAAGAAAAACCGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATc < 6:74581/139‑1 (MQ=255) gAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATc < 7:100115/139‑1 (MQ=255) gAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATc < 7:114786/139‑1 (MQ=255) gAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATc < 3:131260/139‑1 (MQ=255) gAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGAAAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATc < 8:246360/139‑1 (MQ=255) gAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGGCGTTGAATTGAAATTTGATAATAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATc < 3:22963/139‑1 (MQ=255) gAAGGCATTATTCAGTTCTAAGAGTAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGAAAACAAAAACCGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATc < 2:399427/139‑1 (MQ=255) gAAGGAATTATTCTTTTCTTAGAGTAATACCAAAACTTCAATCCGGCCGTAACGGTCGTTTAATTCAAATTTTAAAACAAAAACCGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATc < 1:207207/139‑1 (MQ=255) ggCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCaa > 7:88937/1‑107 (MQ=255) ggCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCaa < 8:88937/107‑1 (MQ=255) ggCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCag < 7:75095/115‑1 (MQ=255) ggCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCag > 8:75095/1‑115 (MQ=255) attattCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAAATGCCAATTGATAAGAAAAAACGCGTCTCAGCCTTGGTGTTTTTCAACGCACCCTAAGAATAAAAATGAGGTAATCAAAcca > 2:337446/1‑138 (MQ=255) attCAGTTCTTATAGGAATACCACAAATTCAATCCGGACGTTACCGTCGTTGAATTGAAATTTGATATTAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTa < 6:102442/138‑1 (MQ=255) aGTTCTTAGAGTAATACAAAAACTACAATCCGGACGTTCCCGTCGTTGAATTTCATTTTGATAACAAAAACCGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCcg < 6:251167/139‑1 (MQ=255) aGTTCTTACAGTAATACCACAACTTCAATCGGGACGTTACCGTCGTTTATTTGAAATTTGATAATAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCcg < 2:363866/139‑1 (MQ=255) ttCTTAGAGGAATACCCCAACTTCAATCCGGACGTTACCGTCGTGGTATTGCAAATTGATAAGAAAAAAGGGGTCTACGCCATGGTTGTTGTAAAAGAAGCAGAACAATAAAAATGTCTTAATCAAAACTTACAAcgcg > 2:26652/1‑139 (MQ=255) ttCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTTCAATTTGATAAGAAAAAATGCTTCTCCGCCTTGTTTTTTTTGAACGAAGCAGAAGAATAAAAAATTATTAATAAAACCTTACTCcgcg > 6:296655/1‑139 (MQ=255) ttCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATc < 2:47428/124‑1 (MQ=255) ttCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATc > 1:47428/1‑124 (MQ=255) ttCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCcgcg > 5:150151/1‑139 (MQ=255) ttCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCATACTCcgcg > 4:149211/1‑139 (MQ=255) ttCATAGAGGAATACAACAACTTCAAACAGGACGTTACCGTCGTATAATTGCAATTAGAAAAGAAAAAAGGCTTCTCACCCTTGGTTTTTTTGAACGAAGAAGAAGAAATAAAATTTCATAATCAAACCTTACTccaa > 6:139537/1‑136 (MQ=255) catcccACAACTTAAAGCCGGACGAACCCGTCGGTGAATTGAAATTTAAAAAAAAAACCGGCTGCTCCGCCTTTGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGTAAGGt < 5:16764/135‑1 (MQ=255) aaaaCCACAACTTCAACCCGGACGTTACCGTCGTTGAATTGCAATTTGAAAAGAAAAACGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGTAAGGt < 7:342346/136‑1 (MQ=255) aaTACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGTAAGGt > 8:400960/1‑139 (MQ=255) aaTACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGGAAGGt > 3:100005/1‑139 (MQ=255) aaTACCACAACTTCAATCCGGACGTTACCGTCGATGAAATGCAATTTGATAATAAAAAAGGCTTCTACGACATGGTTTTTTTAAACGAAGCATAAGAATAAAAATGTCTTAATAAAACATTAATACGCGCGGGTAAgct > 6:228200/1‑137 (MQ=255) tACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGt < 8:327193/132‑1 (MQ=255) tACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGt > 7:327193/1‑132 (MQ=255) acaACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGTAAGGttttttt < 6:139086/139‑1 (MQ=255) acaACTTCAATCCCGACCTTCCCGTCGTGGAATTGCAATTTGATAAGAAAAACGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGTAAGGttttttt < 8:375647/139‑1 (MQ=255) caACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCCACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGGAAGGttttttt > 6:385707/1‑138 (MQ=255) caACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGTAAGGttttttt > 6:410426/1‑138 (MQ=255) caACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTACGCCGTGGTTTTTGTCAACGAAGCAGAATAATAAAAATGTCTTAATAAAACCTTACGCCGCGCGGGTAAGGttttttt > 8:276050/1‑138 (MQ=255) aaCTTCAATCCGGACTTTCCCGTCGTTTAATTCCAATTGTAAAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGTAAGGTTTTTTTaa < 8:163154/139‑1 (MQ=255) aaCTTCAATCCGGACGTTACCGTCGTTTAATTGCAATTTGAAAACAAAAAACGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGTAAGGTTTTTTTaa < 4:17247/139‑1 (MQ=255) cTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAG‑AAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGTAAGGTTTTTTTAATgg > 8:398664/1‑139 (MQ=255) tCAATCCGGACGTTACCGTCGTGGTATTGGAATTTGATAAGAAAAAAAGCGTAAACCCCGTGGTTTTTTGGAACGACACAGAAGAAAAAAAATTTCTTTATAAAAACTTCATCACCACCGGGAAGGtttttttttagta > 6:16764/1‑133 (MQ=255) cAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTATCCGCCTTGGGTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGTAATGTTTTTTTAATGGtt > 4:89673/1‑139 (MQ=255) cAATCCGGACGTTACCGTCGTTGAATTGCAAATTGTTAAGAAAAAAGGCTTCTCCGCCGTGGTTTTTGTCAACGAAGCAGAAGAATAAAAAAGTCTTAATCAAACCTTACTCCGCGCGGGTAATGTTTTTGTAATgggt > 4:64535/1‑137 (MQ=255) cGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGTAAGGTTTTTTTAATGGTTTctct < 8:229034/139‑1 (MQ=255) cGGACGTTACCGGCGTTGAATTGCAATTTGAAAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGTAAGGTTTTTTTAATGGTTTctct < 6:390201/139‑1 (MQ=255) gACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATc < 3:314116/94‑1 (MQ=255) gACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATc > 4:314116/1‑94 (MQ=255) gACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGTAAGGTTTTTTTAATGGTTTctct > 5:75910/1‑137 (MQ=255) cccGTCGGTCAATTGCAATTTTAAAAGAAAAACCGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGTAAGGTTTTTTTAATGGTTTCTCTGAGCATa < 5:213726/137‑1 (MQ=255) aCCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGTAAGGTTTTTTTAATGGTTTCTCTGAGCATa < 7:400960/138‑1 (MQ=255) ttGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCGTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGTAAGGTTTTTTTAATGGTTTGTCTGAGCATAAAGTTAtt > 3:32067/1‑139 (MQ=255) ttGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGTAAGGTTTTTTTAATGGTTTCTCTGAGCATAAAGTTATTTCGtt < 2:296575/139‑1 (MQ=255) cAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGTAAGGTTTTTTTAATgg < 2:4610/109‑1 (MQ=255) cAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGTAAGGTTTTTTTAATgg > 1:4610/1‑109 (MQ=255) cAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGTAAGGTTTTTTTAATGGTTTCTCTGAGCATAAAGTTATTTCGtttt > 7:5120/1‑138 (MQ=255) | TCTTCGCTGAAGCTACATTTGGCCTGCACCACAAGCAGCTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGTAAGGTTTTTTTAATGGTTTCTCTGAGCATAAAGTTATTTCGTTTT > CP006881/3905432‑3905694 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |