| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP006881 | 1,175,961 | T→G | 8.2% | R156R (CGT→CGG) | U712_05840 → | Oligopeptide transport ATP‑binding protein AppF |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 1,175,961 | 0 | T | G | 8.2% | 263.6 / 2.5 | 120 | R156R (CGT→CGG) | U712_05840 | Oligopeptide transport ATP‑binding protein AppF |
| Reads supporting (aligned to +/- strand): ref base T (66/41); new base G (8/4); total (75/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 123 total aligned reads displayed.
TTAAACCCGAGAAAGACCCTGCGTTCCATCATAAAGGAGCCGTTTAATACGCACAACATGTATACCATGCGTGAACGAAACGAAAAAGTTGAAGAGCTGCTTGCAAGAGTAGGGCTTCACCCGTCGTTTGCCGGCCGTTATCCCCATGAGTTTTCAGGCGGCCAGCGTCAGCGGATCGGCATTGCCAGAGCACTCACTTTGAATCCAGAGCTGATCATTGCAGATGAGCCGGTTTCCGCACTTGATGTATCCATTCAGGCCCAAGTGATTAA > CP006881/1175824‑1176095 | ttAAACCCGAGAAAGACCCTGCGTTCCATCATAAAGGAGCCGTTTAATACGCACAACATGTATACCATGCGTGAACGAAACGAAAAAGTTGAAGAGCTGCTTGCAAGAGTAGGGCTTCACCCGTCGTTTGCCGGCCGtt < 6:373193/139‑1 (MQ=255) aaaCCCGAGAAAGACCCTGCGTTCCATCATAAAGGAGCCGTTTAATACGCACAACATGTATACCATGCGTGAACGAAACGAAAAAGTTGAAGAGCTGCTTGCAAGAGTAGGGCTTCACCCGTCGTTTGCCGGCCGTTa < 3:247802/138‑1 (MQ=255) aGGAGCCGTTTAATACGCACAACATGTATACCATGCGTGAACGAAACGAAAAAGTTGAAGAGCTGCTTGCAAGAGTAGGGCTTCACCCGTCGTTTGCCGGCCGTTATCCCCATGAGTTTTCAGGCGGCCAGCGGCAGCg > 3:407446/1‑139 (MQ=255) gCCGTTTAATACGCACAACATGTATACCATGCGTGAACGAAACGAAAAAGTTGAAGAGCTGCTTGCAAGAGTAGGGCTTCACCCGTCGTTTGCCGGCCGTTATCCCCATGAGTTTTCAGGCGGCCAGCGTCAGCGGATc > 5:91588/1‑139 (MQ=255) tttAATACGCACAACATGTATACCATGCGTGAACGAAACGAAAAAGTTGAAGAGCTGCTTGCAAGAGTAGGGCTTCACCCGTCGTTTGCCGGCCGGTATCCCCATGAGGTTTAAGGCGGCCCCCCTCCGCGGAtacgc > 8:115050/1‑134 (MQ=255) ttAATACGCACAACATGTCTACCATGCGTGAACGAACCGAAAAAGTTGAAGAGCTGCTTGCAAGAGTAGGGCTTCACCCGGCGTTGGCCGGCCGTTATCCCCATGAGTTTTCAGGCGGCCAGCGTCAGCGGATCGGCAt < 3:81636/139‑1 (MQ=255) tAATACGCACAACATGTATACCATGCGTGAACGAAACGAAAAAGTTGAAGAGCTGCTTGCAAGAGTAGGGCTTCACCCGTCGTTTGCCGGCCGTTATCCCCATGAGTTTTCAGGCGGCCAGCGTCAGCGGATCGGCAt < 4:407446/138‑1 (MQ=255) agagacagcaTGTATACCATGCGTGAACGAAACGAAAAAGTTGAAGAGCTGCTTGCAAGAGTAGGGCTTCACCCGTCGTTTGCCGGCCGTTATCCCCATGAGTTTTCAGGCGGCCAGCGTCAGCGGATCGGCATTGcc < 5:36053/134‑1 (MQ=255) gCACAACATGTATACCATGCGTGAACGAAACGAAAAAGTTGAAGAGCTGCTTGCAAGAGTAGGGCTTCACCCGTCGTTTGCCGGCCGGTATGCCCCTGAGTTTTAAGGCGGCCCGCGGGCGCCGGTCGGCATTGcccgg > 1:209726/1‑136 (MQ=255) acaacaTGTATACCATGCGTGAACGAAACGAAAAAGTTGAAGAGCTGCTTGCAAGAGTAGGGCTTCACCCGTCGTTTTCCCGCCCGTATACCCAAGAGTTTTGATGCGGCCCGCGGCCGCGGCTACGCAGTGCCagaac > 6:59751/1‑137 (MQ=255) acaacaTGTATACCATGCGTGAACGAAACGAAAAAGTTGAAGAGCTGCTTGCAAGAGTAGGGCTTCACCCGTCGTTTGCCGGCCGTTATCCCCATGAGTTTTCCTGCGGCCAGCGTCAGCGGATCGGCCTGGCCAGAGc > 4:288336/1‑139 (MQ=255) acaacaTGTATACCATGCGTGAACGAAACGAAAAAGTTGAAGAGCTGCTTGCAAGAGTAGGGCTTCACCCGTCGTTTGCCGGCCGTTATACCCCTGAGTTTTCAGGCGGCCAGCGTCAGCGGATCGGCATTTCCCGAGc > 4:276556/1‑139 (MQ=255) gcaTGTATACCATGCGTGAACGAAACGAAAAAGTTGAAGAGCTGCTTGCAAGAGTAGGGCTTCACCCGTCGTTTGCCGGCCGTTATCCCCATGAGTTTTCAGGCGGCCAGCGTCAGCGGATCGGCATTGCCAGAGcact < 1:297064/138‑1 (MQ=255) caTGTATACCATGCGTGAACGAAACGAAAAAGTTGAAGAGCTGCTTGCAAGAGTAGGGCTTCACCCGTCGTTTGCCGGCCGTTATCCCCATGAGTTTTCAGGCGGCCAGCGTCAGCGGATCGGCATTGCCAGAGcactc < 7:275094/139‑1 (MQ=255) tataCCATGCGTGAACGAAACGAAAAAGTTGAAGAGCTGCTTGCAAGAGTAGGGCTTCACCCGTCGTTTGCCGGCCGTTATCCCCATGAGTTTTCAGGCGGCCAGCGTCAGCGGATCGGCATTGCCAGAGCCCTCACtt > 8:222790/1‑139 (MQ=255) taCCATGCGTGAACGAAACGAAAAAGTTGAAGAGCTGCTTGCAAGAGTAGGGCTTCACCCGTCGTTTGCCGGCCGTTATCCCCATGAGTTTTAAGGCGGCCAGCGTCAGCGGATCGGCATTGCCAGAGCACTCACttt > 1:57617/1‑138 (MQ=255) taCCATGCGTGAACGAAACGAAAAAGTTGAAGAGCTGCTTGCAAGAGTAGGGCTTCACCCGTCGTTTGCCGGCCCTTATAAACAATAGTTTTAACGCGGCCCGCGTCAGCGGATCGGCATTGCCATCGcactcaaatt > 4:127304/1‑134 (MQ=255) ccATGCGTGAACGAAACGAAAAAGTTGAAGAGCTGCTTGCAAGAGTAGGGCTTCACCCGTCGTTTGCCGGCCGTTATACCCATTAGTTTTCACGCGGCCAGCGTCAGCGGATAGGCATTGCCAGAGCACTCCCGTTGaa > 8:252139/1‑139 (MQ=255) aTGCGTGAACGAAACGAAAAAGTTGAAGAGCTGCTTGCAAGAGTAGGGCTTCACCCGTCGTTTGCCGGCCGTTATCCCCATGAGTTTTCAGGCGGCCAGCGTCAGCGGATCGGCATTGCCAGAGCACTCACTTTGAATc > 7:228211/1‑139 (MQ=255) aTGCGTGAACGAAACGAAAAAGTTGAAGAGCTGCTTGCAAGAGTAGGGCTTCACCCGTCGTTTGCCGGCCGTTATCCCCATGAGTTTTCAGGCGGCCAGCGTCAGCGGATCGGCATTGCCAGAGCACTCACTTTGAATc > 4:396729/1‑139 (MQ=255) tGCGTGAACGAAACGAAAAAGTTGAAGAGCTGCTTGCAAGAGTCGGGCTTCACCCGTCGTTTGCCGGCAGTTATCCCCATGAGTTTTCAGGCGGCCCGCGTCAGCGGATCGGCATTTCCAGAGCACTCACTTTTAATc > 6:366174/1‑138 (MQ=255) tGCGTGAACGAAACGAAAAAGTTGAAGAGCTGCTTGCAAGAGTAGGGCTTCCCCCGTCGTTTGCCGGCCGTTATCCCCATGAGGTTTCAGGCGGCCCGCGGCAGCGGATCGGCATTGCCCGAGCACTCACTTTGAATcc > 3:357186/1‑139 (MQ=255) tGCGTGAACGAAACGAAAAAGTTGAAGAGCTGCTTGCAAGAGTAGGGCTTCACCCGTCGTTTTCCGGCCGTTATACCCCAGAGTTTTAAGGCGGCCATCGTCAGCGGATCCGCATTGCCAAAGCACTCACATTGAATcc > 8:275094/1‑139 (MQ=255) tGCGTGAACGAAACGAAAAAGTTGAAGAGCTGCTTGCAAGAGTAGGGCTTCACCCGTCGTTTGCCGGGCGTTTTCCCCCTGAGGTTTCACGCGGCCCCCGGCAGCGGATCGGCATTGCGCCAGGAGTCACTTTTAAtac > 1:193649/1‑137 (MQ=255) tGCGTGAACGAAACGAAAAAGTTGAAGAGCTGCTTGCAAGAGTAGGGCTTCACCCGTCGTTTGCCGGCCGtt > 8:58951/1‑72 (MQ=255) tGCGTGAACGAAACGAAAAAGTTGAAGAGCTGCTTGCAAGAGTAGGGCTTCACCCGTCGTTTGCCGGCCGtt < 7:58951/72‑1 (MQ=255) tGCGTGAACGAAACGAAAAAGTTGAAGAGCTGCTTGCAAGAGTAGGGCTTCACCCGTCGTTTGCCGGCCGTTATCCCCCTGAGTTTTCAGGCGGCCAGCGTCAGCGGCTCGGCATTGCCCGCGCCCACCCTTGGAATc > 2:297064/1‑138 (MQ=255) tGCGTGAACGAAACGAAAAAGTTGAAGAGCTGCTTGCAAGAGTAGGGCTTCACCCGTCGTTTGCCGGCCGTTATCCCCATGAGTTTTCAGGCGGCCAGCGTCAGCTGATCGGCATTGCCAGAGCACTCACTTTGAATc > 5:363120/1‑138 (MQ=255) tGCGTGAACGAAACGAAAAAGTTGAAGAGCTGCTTGCAAGAGTAGGGCTTCACCCGTCGTTTGCCGGCCGTTATCCCCATGAGTTTTCAGGCGGCCAGCGTCAGCGGa > 7:312884/1‑108 (MQ=255) tGCGTGAACGAAACGAAAAAGTTGAAGAGCTGCTTGCAAGAGTAGGGCTTCACCCGTCGTTTGCCGGCCGTTATCCCCATGAGTTTTCAGGCGGCCAGCGTCAGCGGa < 8:312884/108‑1 (MQ=255) tGCGTGAACGAAACGAAAAAGTTGAAGAGCTGCTTGCAAGAGTAGGGCTTCACCCGTCGTTTGCCGGCCGTTATCCCCATGAGTTTTCAGGCGGCCAGCGTCAGCGGCTCGGCATTGCCAGCGCACTCACTTTTAATc > 8:240607/1‑138 (MQ=255) tGCGTGAACGAAACGAAAAAGTTGAAGAGCTGCTTGCAAGAGTAGGGCTTCACCCGTCGTTTGCCGGCCGTTATCCCCATGAGTTTTCAGGCGGCCAGCGTCAGCGGATCGGCATTGcc < 6:118926/119‑1 (MQ=255) tGCGTGAACGAAACGAAAAAGTTGAAGAGCTGCTTGCAAGAGTAGGGCTTCACCCGTCGTTTGCCGGCCGTTATCCCCATGAGTTTTCAGGCGGCCAGCGTCAGCGGATCGGCATTGcc > 5:118926/1‑119 (MQ=255) tGCGTGAACGAAACGAAAAAGTTGAAGAGCTGCTTGCAAGAGTAGGGCTTCACCCGTCGTTTGCCGGCCGTTATCCCCATGAGTTTTCAGGCGGCCAGCGTCAGCGGATCGGCATTGCCCGAGCACTCACTTTGCATc > 4:117833/1‑138 (MQ=255) tGCGTGAACGAAACGAAAAAGTTGAAGAGCTGCTTGCAAGAGTAGGGCTTCACCCGTCGTTTGCCGGCCGTTATCCCCATGAGTTTTCAGGCGGCCAGCGTCAGCGGATCGGCATTGCCAGAGGACTCACTTTGAATc > 6:219275/1‑138 (MQ=255) tGCGTGAACGAAACGAAAAAGTTGAAGAGCTGCTTGCAAGAGTAGGGCTTCACCCGTCGTTTGCCGGCCGTTATCCCCATGAGTTTTCAGGCGGCCAGCGTCAGCGGATCGGCATTGCCAGAGCCCTCACTTTGAATc > 8:376958/1‑138 (MQ=255) tGCGTGAACGAAACGAAAAAGTTGAAGAGCTGCTTGCAAGAGTAGGGCTTCACCCGTCGTTTGCCGGCCGTTATCCCCATGAGTTTTCAGGCGGCCAGCGTCAGCGGATCGGCATTGCCAGAGCCCTCACTTTGAATc > 8:234698/1‑138 (MQ=255) tGCGTGAACGAAACGAAAAAGTTGAAGAGCTGCTTGCAAGAGTAGGGCTTCACCCGTCGTTTGCCGGCCGTTATCCCCATGAGTTTTCAGGCGGCCAGCGTCAGCGGATCGGCATTGCCAGAGCACTCACTTTGAATcc > 2:316480/1‑139 (MQ=255) tGCGTGAACGAAACGAAAAAGTTGAAGAGCTGCTTGCAAGAGTAGGGCTTCACCCGTCGTTTGCCGGCCGTTATCCCCATGAGTTTTCAGGCGGCCAGCGTCAGCGGATCGGCATTGCCAGAGCACTCACTTTGAATc > 6:249306/1‑138 (MQ=255) tGCGTGAACGAAACGAAAAAGTTGAAGAGCTGCTTGCAAGAGTAGGGCTTCACCCGTCGTTTGCCGGCCGTTATCCCCATGAGTTTTCAGGCGGCCAGCGTCAGCGGATCGGCATTGCCAGAGCACTCACTTTGAATc > 4:164271/1‑138 (MQ=255) tGCGTGAACGAAACGAAAAAGTTGAAGAGCTGCTTGCAAGAGTAGGGCTTCACCCGTCGTTTGCCGGCCGTTATCCCCATGAGTTTTCAGGCGGCCAGCGTCAGCGGATCGGCATTGCCAGAGCACTCACTTTGAATc > 3:389649/1‑138 (MQ=255) tGCGTGAACGAAACGAAAAAGTTGAAGAGCTGCTTGCAAGAGTAGGGCTTCACCCGTCGTTTGCCGGCCGTTATCCCCATGAGTTTTCAGGCGGCCAGCGTCAGCGGATCGGCATTGCCAGAGCACTCACTTTGAATc > 2:256275/1‑138 (MQ=255) tGCGTGAACGAAACGAAAAAGTTGAAGAGCTGCTTGCAAGAGTAGGGCTTCACCCGTCGTTTGCCGGCCGTTATCCCCATGAGTTTTCAGGCGGCCAGCGTCAGCGGATCGGCATTACCAGAGCACTCACTTTGAATcc > 5:120553/1‑139 (MQ=255) tGCGTGAACGAAACGAAAAAGTTGAAGAGCTGCTTGCAAGAGTAGGGCTTCACCCGTCGTTTGCCGGCCGTTATCCCCATGAGTTTTCAGGCGGCCAGCGTCACCGGATCGGCATTGCCAGAGCACTCACTTTGAATc > 7:102536/1‑138 (MQ=255) tGCGTGAACGAAACGAAAAAGTTGAAGAGCTGCTTGCAAGAGTAGGGCTTCACCCGTCGTTTGCCGGCCGTTATCCCCATGAGTTTTAAGGCGGCCAGCGTCAGCGGATAGGCATTGCCAGAGCACTCACTTTGAATc > 8:314617/1‑138 (MQ=255) tGCGTGAACGAAACGAAAAAGTTGAAGAGCTGCTTGCAAGAGTAGGGCTTCACCCGTCGTTTGCCGGCCGGTATCCCCATGAGTTTTCAGGCGGCCAGCGTCAGCGGCTCGGCATTGCCAGAGCACGCACGTTGAATcc > 1:194634/1‑139 (MQ=255) tGCGTGAACGAAACGAAAAAGTTGAAGAGCTGCTTGCAAGAGTAGGGCTTCACCCGTCGTTTGCCGGCCGGTATCCCCATGAGTTTTAAGGCGGCCAGCGTCAGCGGATCGGCCTTGCCAGACCACTCCCGTTGATTc > 8:399795/1‑138 (MQ=255) tGCGTGAACGAAACGAAAAAGTTGAAGAGCTGCTTGCAAGAGTAGGGCTTCACCCGTCGTTTGCCGGCCGATTTCCCCATTACTTTTAAGGCGGCCAGCGTCCGCGCCTCGGCATTGGCAGAGCACGAAGTTTGaaac > 8:244634/1‑136 (MQ=255) tGCGTGAACGAAACGAAAAAGTTGAAGAGCTGCTTGCAAGAGTAGGGCTTCACCCGTCGTTTGCCCGCCGTTATCCCCCTGAGTTTTCAGGCGGCCCGCGTCCGCGGATCGGCATTGCCAGAGCACGCCCGTTGAATcc > 1:276381/1‑139 (MQ=255) tGCGTGAACGAAACGAAAAAGTTGAAGAGCTGCTTGCAAGAGTAGCGCTTCACCCGTCGTTTGCCGGCCGTTATCCCCATGATTTTTCAGGCTGCCAGAGTCAGCGGATCGGCATTGACAGAGCACGCACTTTGAATc > 8:333699/1‑138 (MQ=255) atcctGAACGAAACGAAAAAGTTGAAGATATTATTGAAAAAAAAAAACTTCACCCGTCGTTTGCCCGCCCTTATCCCCATGAGTTTAAAGGCCGCCAGCGTCACCGCATCGGCATTTCCACAGCACTCACTTTTAAta > 6:369216/5‑137 (MQ=255) gCGTGAACGAAACGAAAAAGTTGAAGAGCTGCTTGCAAGAGTAGGGCTTCACCCGTCGTTTGCCGGCCGTTATCCCCATGAGTTTTCAGGCGGCCAGCGTCAGCGGATCGGCATTGCCAGAGCACTCACttt > 3:155951/1‑132 (MQ=255) cGTGAACGAAACGAAAAAGTTGAAGAGCTGCTTGCAAGAGTAGGGCTTCACCCGTCGTTTGCCGGCCGTTATCCCCATGAGTTTTCAggcggc < 2:126834/93‑1 (MQ=255) cGTGAACGAAACGAAAAAGTTGAAGAGCTGCTTGCAAGAGTAGGGCTTCACCCGTCGTTTGCCGGCCGTTATCCCCATGAGTTTTCAggcggc > 1:126834/1‑93 (MQ=255) cGTGAACGAAACGAAAAAGTTGAAGAGCTGCTTGCAAGAGTAGGGCTTCACCCGTCGTTTGCCGGCCGTTATCCCCATGAGTTTTCAGGCGGCCCGCGTCAGCGGATCGGCATTGCCAGAGCACTCACTTTGAATc > 1:63240/1‑136 (MQ=255) cGTGAACGAAACGAAAAAGTTGAAGAGCTGCTTGCAAGAGTAGGGCTTCACCCGTCGTTTGCCGGCCGTTATCCCCATGAGTTTTCAGGCGGCCAGCGTCAGCGGATCGGCATTGCCAGAGCACTCACTTTGAATc > 7:2139/1‑136 (MQ=255) cGTGAACGAAACGAAAAAGTTGAAGAGCTGCTTGCAAGAGTAGGGCTTCACCCGTCGTTTGCCGGCCGTTATCCCCATGAGTTTTCAGGCGGCCAGCGTCAGCGGATCGGCATTGCCAGAGCACTCACTTTGAATc < 8:2139/136‑1 (MQ=255) tGAACGAAACGAAAAAGTTGAAGAGCTGCTTGCAAGAGTAGGGCTTCACCCGTCGTTTGCCGGCCGTTATCCCCATGAGTTTTCAGGCGGCCAGCGTCAGCGGATCGGCATTGCCAGAGCACTCACTTTGAATCCagag < 3:276556/139‑1 (MQ=255) aacgaaacgaAAAAGTTGAAGAGCTGCTTGCAAGAGTAGGGCTTCACCCGTCGTTTGCCGGCCGTTATCCCCATGAGTTTTAAGGCGGCCACCGTCCGCGGTTCGGCATTGCCAGAGCACTCACATTGAATCAAGAGcg > 7:208350/1‑138 (MQ=255) aacgaaacgaAAAAGTTGAAGAGCTGCTTGCAAGAGTAGGGCTTCACCCGTCGTTTGCCGGACGTTATACCCATGAGTTTTCAGGCGGCCCGAGTCAGGGGCAATGCATTGGCATCGGACTCACTTTGAATGCacacgt > 6:324186/1‑134 (MQ=255) gaaacgaaaAAGTTGAAGAGCTGCTTGCAAGAGTAGGGCTTCACCCGTCGTTTGCCGGCCGTTATCCCCATGAGTTTTCAGGCGGCCAGCGTCAGCGGATCGGCATTCCCAGAGCACTCACTTTGAATCCAGAGCTGAt < 6:120553/139‑1 (MQ=255) acgagCTGCTTGCACGAGGAGGGCTTCACCCGGCGTTTGCCGGCCGTTATCCCCATGAGTTTTCAGGCGGCCAGCGTCAGCGGATCGGCATTGCCAGAGCACTCACTTTGAATCCAGAGCTGATCATTGCAGATGAGcc < 7:281057/137‑1 (MQ=255) aaGAGCTGCTTGCAAGAGTAGGGCTTCACCCGTCGTTTGCCGGCCGTTATCCCCATGAGTTTTCAGGCGGCCAGCGTCAGCGGATCGGCATTGCCAGAGCACTCACTTTGAATCCAGAGCTGATCATTGCAGATGAGcc > 8:245268/1‑139 (MQ=255) ctgctTGCAAGAGTAGGGCTTCACCCGTCGTTTGCCGGCCGTTATCCCCATGAGTTTTCAGGCGGCCAGCGTCAGCGGATCGGCATTGCCAGAGCACTCACTTTGAATCCagag < 8:224621/114‑1 (MQ=255) ctgctTGCAAGAGTAGGGCTTCACCCGTCGTTTGCCGGCCGTTATCCCCATGAGTTTTCAGGCGGCCAGCGTCAGCGGATCGGCATTGCCAGAGCACTCACTTTGAATCCagag > 7:224621/1‑114 (MQ=255) tgctTGCAAGAGTAGGGCTTCACCCGTCGTTTGCCGGCCGTTATCCCCATGAGTTTTCAGGCGGCCAGCGTCAGCGGATCGGCATTGCCAGAGCACTCACTTTGAATCCAGAGCTGATCATTGCAGATGAGCCGGttta > 3:321579/1‑138 (MQ=255) gctTGCAAGAGTAGGGCTTCACCCGTCGTTTGCCGGCCGTTTTACCCCTGAGTGTTCAAGAGGCCAGCGTCAGCGGATCGGCAGTGCCAGAGCCCTCACTTTGTCGACAGAGCGGCTCATTGGCTATGGGACGGTTTcc > 4:99407/1‑139 (MQ=255) gctTGCAAGAGTAGGGCTTCACCCGTCGTTTGCCGGCCGTTATCCCCATGAGTTTTCAGGCGGCCAGCGTCAGCGGATCGGCATTGCCAGAGCACTCACttt < 3:291931/102‑1 (MQ=255) gctTGCAAGAGTAGGGCTTCACCCGTCGTTTGCCGGCCGTTATCCCCATGAGTTTTCAGGCGGCCAGCGTCAGCGGATCGGCATTGCCAGAGCACTCACttt > 4:291931/1‑102 (MQ=255) gctTGCAAGAGTAGGGCTTCACCCGTCGTTTGCCGGCCGGTTTCCCCATGAGTTTTAAGGCGGCCCGCGTCCGCGGATCGGCATTGCCCGCGCCCTCACTTTTTATCCAGAGCTGGTCATTGCAGGTGCTCCGGTTTcc > 1:308662/1‑139 (MQ=255) ctTGCAAGAGTAGGGCTTCACCCGTCGTTTGCCGGCCGTTATCCCCATGAGTTTTCAGGCGGCCAGCGTCAGCGGATCGGCATTGCCAGAGCACTCACTTTGAATCCAGAGCTGATCATTGCAGATGAGCCGGTTTc < 3:164271/137‑1 (MQ=255) ctTGCAAGAGTAGGGCTTCACCCGTCGTTTGCCGGCCGTTATCCCCATGAGTTTTCAGGCGGCCAGCGTCAGCGGATCGGCATTGCCAGAGCACTCACTTTGAATCCAGAGCTGATCATTGCAGATGAGCCGGTTTc < 3:98452/137‑1 (MQ=255) ctTGCAAGAGTAGGGCTTCACCCGTCGTTTGCCGGCCGTTATCCCCATGAGTTTTCAGGCGGCCAGCGTCAGCGGATCGGCATTGCCAGAGCACTCACTTTGAATCCAGAGCTGATCATTGCAGATGAGCCGGTTTc < 7:245268/137‑1 (MQ=255) gagTAGGGCTTCACCCGTCGGTTGCCGGCCGTTATCCCCATGAGTTTTCAGGCGGCCAGCGTCAGCGGATCGGCATTGCCAGAGCACTCACTTTGAATCCAGAGCTTATCATTGCAGATGAGCCGGTTTCCGCACTTGa < 7:399795/139‑1 (MQ=255) agTAGGGCTTCACCCGTCGTTTGCCGGCCGTTATCCGCATGAGTTTTCAGGCGGCCAGCGTCAGCGGATCGGCATTGCCAGAGCACTCACTTTGAATCCAGAGCTGATCATTGCAGATGAGCCGGTTTCCGCACTTGa < 2:193649/138‑1 (MQ=255) tAGGGCTTCACCCGTCGTTTGCCGGCCGTTATCCCCATGAGTTTTAAGGCGGCCAGCGTCAGCCGATCGGCATTGCCAGAGCACTCACTTTGAATCCAGAGCTGAACATTGCAGATGAGCCGGTTTCCGCACTTGATg > 8:67524/1‑138 (MQ=255) tAGGGCTTCACCCGTCGTTTGCCGGCCGTTATACCCCTGATTATTCACGCCGCCAGCCTCAGCGGATCGGCAATTCCAGAGCAAACACTTTTAATAAAGAGCTGATCAATGCAGATGATACGGTTTGCGCAcataaat > 8:185491/1‑132 (MQ=255) gggCTTCACCCGTCGTTTGCCGGCCGTTATCCCCATGAGTTTTCAGGCGGCCAGCGTCAGCGGATCGGCATTGCCAGAGca > 6:86085/1‑81 (MQ=255) gggCTTCACCCGTCGTTTGCCGGCCGTTATCCCCATGAGTTTTCAGGCGGCCAGCGTCAGCGGATCGGCATTGCCAGAGca < 5:86085/81‑1 (MQ=255) gggCTTCACCCGTCGTTTGCCGGCCGTTATCCCCATGAGTTTTCAGGCGGCCAGCGTCAGCGGATCGGCATTGCCAGAGCACTCACTTTGAATCCAGAGCTGATCATTGCAGATGAGCCGGTTTCCGCACTTGATGTAt < 2:209726/139‑1 (MQ=255) gggCTTCACCCGTCGTTTGCCGGCCGTTATCCCCATGAGTTTTCAGGCGGCCAGCGTCAGCGGATCGGCATTGCCAGAGCACTCACTTTGAATCCAGAGCTGATCATTGCAGATGAGCCGGTTTCCGCACTTGATGTAt < 5:249306/139‑1 (MQ=255) gggCTTCACCCGTCGTTTGCCGGCCGGTATCCCCCTGAGTTTTCAGGCGGCCAGCGGCAGCGGATCGGCATTGCCAGAGCACTCACTTTGAATCCAGAGCTGATCATTGCAGATGAGCCGGTTTCCGCACTTGATGTAt < 8:228211/139‑1 (MQ=255) gggCTTCACCCGTCGTTAGCCGGGCGGTATCCCCATGAGTTTTCAGGCGGCCAGCGTCAGCGGATCGGCATTGCCAGAGCACTCACTTTGAATCCAGTGCTGATCATTGCAGATGAGCCGGTTTCCGCACTTGATGTAt < 1:388945/139‑1 (MQ=255) gggCATCACCCGTCGTTTGCCGGCCGTTATCCCCATGAGTTTTCAGGCGGCCAGCGTCAGCGGATCGGCATTGCCAGAGCACTCACTTTGAATCCAGAGCTGATCATTGCAGATGAGCCGGTTTCCGCACTTGATGTa < 7:185491/138‑1 (MQ=255) ggCTTCACCCGTCGTTTGCCGGCCGTTATCCCCATGAGTTTTCAGGCGGCCAGCGTCAGCGGATCGGCATTGCCAGAGCACTCACTTTGAATCCAGAGCTGATCATTGCAGATGAGCCGGTTTc > 3:274925/1‑124 (MQ=255) ggCTTCACCCGTCGTTTGCCGGCCGTTATCCCCATGAGTTTTCAGGCGGCCAGCGTCAGCGGATCGGCATTGCCAGAGCACTCACTTTGAATCCAGAGCTGATCATTGCAGATGAGCCGGTTTc < 4:274925/124‑1 (MQ=255) ggCTTCACCCGTCGTTTGCCGGCCGTTATCCCCATGAGTTTTCAGGCGGCCAGCGTCAGCGGATCGGCATTGCCAGAGCACTCACTTTGAATCCAGAGCTGATCATTGCAGATGAGCCGGTTTCCGCACTTGATGTAt < 1:159070/138‑1 (MQ=255) ggCTTCACCCGTCGTTTGCCGGCCGTTATCCCCATGAGTTTTCAGGCGGCCAGCGTCAGCGGATCGGCATTGCCAGAGCACTCACTTTGAATCCAGAGCTGATCATTGCAGATGAGCCGGTTTCCGCACTTGATGTATc > 7:171413/1‑139 (MQ=255) cTTCACCCGTCGTTTGCCGGCCGTTATCCCCATGAGTTTTCAGGGGGCCAGCGTCAGCGGATCGGCATTGCCAGAGCACTCACTTTGAATCCAGAGCTGATCATTGCAGATGAGCCGGTTTCCGCACTTGATGTATCCa > 1:62216/1‑139 (MQ=255) cACCCGTCGTTTGCCGGCCGTTATCCCCATGAGTTTTCAGGCGGCCAGCGTCAGCGGATCGGCATTGCCAGAGCACTCACTTTGAATCCAGAGCTGATCATTGCAGATGAGCCGGTTTCCGCACTTGATGTATCCATTc > 5:137849/1‑139 (MQ=255) cACCCGTCGTTTGCCGGCCGTTATCCCCATGAGTTTTCAGGCGGCCAGCGTCAGCGGATCGGCATTGCCAGAGCACTAACTTTGAAACCAGAGCAGATCATTGCAGCTTAGCCGGTTTCCGCACTTGATGTAACCAtt > 6:276326/1‑138 (MQ=255) cACCCGTCGTTTGCCGGCCGTTATCCCCATGAGTTTTCAGGCGGCCAGCGGCAGCGGCTCGGCATTGCCAGAGCACTCCCTTTGAATCCAGAGCTGATCAATGCAGATGAGCCGGGTTCCGCCCTTGATGTATCCAtt > 5:279256/1‑138 (MQ=255) tcgtTTGCCGGCGGGTATCCCGATGAGTTTTCAGGCGGCCAGCGTCAGCGGATCGGCATTGCCAGAGGACTCACTTTGAATCCAGAGCTGATCATTGCAGATGAGCCGGTTTCCGCACTTGATGTATCCATTCAGGccc < 4:281569/139‑1 (MQ=255) tcgtTTGCCGGCCGTTATCCCCATGAGTTTTCAGGCGGCCAGCGTCAGCGGATCGGCATTGCCAGAGCACTCACTTTGAATCCAGAGCTGATCATTGCAGATGAGCCGGTTTCCGCACTTGATGTATCCATTCAGGccc < 3:3619/139‑1 (MQ=255) tcgtTTGCCGGCCGTTATCCACATGAGTTTTCAGGCGGCCAGCGTCAGCGGATCGGCATTGCCAGAGCACTCACTTTGAATCCAGAGCTGATCATTGCAGATGAGCCGGTTTCCGCACTTGATGTATCCATTCAGGccc < 5:366174/139‑1 (MQ=255) tcgtTTGCCGGCCGTTATACCCATGAGTTTTAAGGCGGCCAGCGTCAGCGGATCGGCATTGCCAGAGCACTCACTTTGAATCCAGAGCTGATCATTGCAGATGAGCCGGTTTCCGCACTTGATGTATCCATTCAGGcc > 4:169166/1‑138 (MQ=255) cgtTTGCCGGCCGTTATCCCCATGAGTTTTCAGGCGGCCAGCGTCAGCGGATCGGCATTGCCAGAGCACTCACTTTGAATCCAGAGCTGATCATTGCAGATGAGCCGGTTTCCGCACTTGATGTATCCATTCAGGCCCa < 7:115050/139‑1 (MQ=255) ccggccgTTATCCCCATGAGTTTTCAGGCGGCCAGCGTCAGCGGATCGGCATTGCCAGAGCACTCACTTTGAATCCAGAGCTGATCATTGCAGATGAGCCGGTTTCCGCACTTGATGTATCCATTCAGGCCCAAGTGAt < 2:63240/139‑1 (MQ=255) ccggccgTTATCCCCATGAGTTTTCAGGCGGCCAGCGTCAGCGGATCGGCATTGCCAGAGCACTCACTTTGAATCCAGAGCTGATCATTGCAGATGAGCCGGTTTCCGCACTTGATGTATCCATTCAGGCCCAAGTGAt < 7:252139/139‑1 (MQ=255) gccgTTATCCCCATGAGTTTTCAGGCGGCCAGCGTCAGCGGATCGGCATTGCCAGAGCACTCACTTTGAATCCAGAGCTGATCATTGCAGATGAGCCGGTTTCCGCACTTGATGTATCCATTCAGGCCCAAGTGATTaa < 1:314074/139‑1 (MQ=255) | TTAAACCCGAGAAAGACCCTGCGTTCCATCATAAAGGAGCCGTTTAATACGCACAACATGTATACCATGCGTGAACGAAACGAAAAAGTTGAAGAGCTGCTTGCAAGAGTAGGGCTTCACCCGTCGTTTGCCGGCCGTTATCCCCATGAGTTTTCAGGCGGCCAGCGTCAGCGGATCGGCATTGCCAGAGCACTCACTTTGAATCCAGAGCTGATCATTGCAGATGAGCCGGTTTCCGCACTTGATGTATCCATTCAGGCCCAAGTGATTAA > CP006881/1175824‑1176095 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |