Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP006881 1,269,691 T→G 12.6% R32R (CGT→CGG U712_06415 → putative oxidoreductase uxuB

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0068811,269,6910TG12.6% 131.2 / 3.0 65R32R (CGT→CGGU712_06415putative oxidoreductase uxuB
Reads supporting (aligned to +/- strand):  ref base T (19/36);  new base G (7/2);  total (27/38)
Fisher's exact test for biased strand distribution p-value = 2.50e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

GTGGGACGCTTATGAAGCAATGGCAAAAAAAGAGGTGGGCATATGATCCCGCTGCATGAGAACCTGGCTGGTAAAACGGCTGTCATCACTGGCGGCAGCGGCGTGCTTTGCTCTGCGATGGCCCGGGAGCTAGCCCGTCATGGCATGAAGGTGGCGATTTTGAATCGGACGGCTGAAAAAGGCCAAGCGGTCGTGAAGGAGATAACGGCGGCTGGCGGCACAGCGTGCGCTGTTGCTGCGGATGTGCTGGACAGGATGTCACTGGAGCGGG  >  CP006881/1269554‑1269824
                                                                                                                                         |                                                                                                                                     
gtgGGACGCTTATGAAGCAATGGCAAAAAAAGAGGTGGGCATATGATCCCGCTGCATGAGAACCTGGCTGGTAAAACGGCTGTCATCACTGGCGGCAGCGGCGTGCTTTGCTCTGCGATGGCCCGGGAGCTAGCCCGTc                                                                                                                                      <  3:119058/139‑1 (MQ=255)
 tgGGACGCTTATGAAGCAATGGCAAAAAAAGAGGTGGGCATATGATCCCGCTGCATGAGAACCTGGCTGGTAAAACGGCTGTCATCACTGGCGGCAGCGGCGTGCTTTGCTCTGCGATGGCCCGGGAGCTAGCCCGTCa                                                                                                                                     <  1:149349/139‑1 (MQ=255)
 tgGGACGCTTATGAAGCAATGGCAAAAAAAGAGGTGGGCATATGATCCCGCTGCATGAGAACCTGGCTGGTAAAACGGCTGTCATCACTGGCGGCAGCGGCGTGCTTTGCTCTGCGATGGCCCGGGAGCTAGCCCGTCa                                                                                                                                     <  5:307503/139‑1 (MQ=255)
 tgGGACGCTTATGAAGCAATGGCAAAAAAAGAGGTGGGCATATGATCCCGCTGCATGAGAACCTGGCTGGTAAAACGGCTGTCATCACTGGCGGCAGCGGCGTGCTTTGCTCTGCGATGGCCCGGGAGCTAGCCCGTCa                                                                                                                                     <  8:186627/139‑1 (MQ=255)
 tgGGACGCGTATGAAGCAATGTCAAGATAAGCGGTGGGCATATGATCCCGCTGCATGAGAACCTGGGTGGGAAAACGGCTGTCATCACTGGCGGCAGCGGGGTGCTTTGCGCTGCGATGGCCCGGGAGCTAGCCCGTct                                                                                                                                     <  3:283367/139‑2 (MQ=255)
 tgGGACGATTATGAAGCAATTTAAAAAAAAGAGGGGGGCATATGATCCCGCTGCATGAGAACGTGGCTGGTAAAACGGCTGTCATCACTGGCGGCAGCGGAGTGCTTTGCTCTGCGATGGCCCGGGAGCTAGCCCGTCa                                                                                                                                     <  7:148863/139‑1 (MQ=255)
       gCTTATGAAGCAATGGCAAAAAAAGAGGTGGGCATATGATCCCGCTGCATGAGAACCTGGCTGGTAAAACGGCTGTCATCACTGGCGGCAGCGGCGTGGTTTGCTCTGCGATGGCCCGGGAGCTATCCCGTCAGGGCag                                                                                                                               >  6:324762/1‑138 (MQ=255)
       gCTTATGAAGCAATGGCAAAAAAAGAGGTGGGCATATGATCCCGCTGCATGAGAACCTGGCTGGTAAAACGGCTGTCATCACTGGCGGCAGCGGCGTGCTTTGCTCTGCGATGGCCCGGGAGCTAGCCCGTCATGGCAt                                                                                                                               >  6:355564/1‑139 (MQ=255)
        cTTATGAAGCAATGGCAAAAAAAGAGGTGGGCATATGATCCCGCTGCATGAGAACCTGGCTGGTAAAACGGCTGTCATCACTGGCGGCAGCGGCGTGCTTTGCTCTGCGATGGCCCGGGAGCTAGCCCGTCATGGCAt                                                                                                                               >  7:27921/1‑138 (MQ=255)
           aTGAAGCAATGGCAAAAAAAGAGGTGGGCATATGATCCCGCTGCATGAGAACCTGGCTGGTAAAACGGCTGTCATCACTGGCGGCAGCGGCGTGCTTTGCTCTGCGATGGCCCGGGAGCTAGCCCGTCAGGGCATGAAg                                                                                                                           >  5:201034/1‑139 (MQ=255)
                   aTGGCAAAAAAAGAGGTGGGCATATGATCCCGCTGCATGAGAACCTGGCTGGTAAAACGGCTGTCATCACTGGCGGCAGCGGCGTGCTTTGCTCTGCGCTGGCCCGGGAGCTTGCCCGGCATGGGATGAAGGTGGCGAt                                                                                                                   >  6:566/1‑139 (MQ=255)
                   aTGGCAAAAAAAGAGGTGGGCATATGATCCCGCTGCATGAGAACCTGGCTGGTAAAACGGCTGTCATCACTGGCGGCAGCGGCGTGCTTTGCTCTGCGATGGCCCGGGAGCTAGCCCGTCATGGCATGAAGGTGGCGAt                                                                                                                   >  2:47704/1‑139 (MQ=255)
                   aTGGCAAAAAAAGAGGTGGGCATATGATCCCGCTGCATGAGAACCTGGCTGGTAAAACGGCTGTCATCACTGGCGGCAGCGGCGTGCTTTGCTCTGCGATGGCCCGGGAGCTAGCCCGTCATGGCATGAAGGTGGCGAt                                                                                                                   >  7:339666/1‑139 (MQ=255)
                   aTGGCAAAAAAAGAGGTGGGCATATGATCCCGCTGCATGAGAACCTGGCTGGTAAAACGGCTGTCATCACTGGCGGCAGCGGCGTGCGTTGCTCTGCGCTGGCCCGGGAGCTACGCCGTGAAGGCATGAAGGTGGCGAt                                                                                                                   >  7:343781/1‑139 (MQ=255)
                                agGTGGGCATATGATCCCGCTGCATGAGAACCTCGCTGGTAAAACGGCTGTCATCACTGGCGGCAGCTGCGTGCTTTTATGAGCCATGGGCCGGGAGCTTGACCGAGATGGCATGAAGCTGGGGAAGTTGAATAggtcc                                                                                                      >  4:165390/1‑136 (MQ=255)
                                      gCATATGATCCCGCTGCATGAGAACCTGGCTGGTAAAACGGCTGTCATCACTGGCGGCAGCGGCGTGCTTTGCTCTGCGATGGCCCGGGAGCTAGCCCGTCATGGCATGAAGGTGGCGATTTTGAATCGGACGGCTGaa                                                                                                <  7:374747/139‑1 (MQ=255)
                                       cATATGATCCCGCTGCATGAGAACCTGGCTGGTAAAACGGCTGTCATCACTGGCGGCAGCGGCGTGCTTTGCTCTGCGATGGCCCGGGAGCTAGCCCGTCATGGCATGAAGGTGGCGATTTTGAATCGGACGGCTGaaa                                                                                               <  6:401152/139‑1 (MQ=255)
                                               cccGCTGCATGAGAACCTGGCTGGTAAAACGGCTGTCATCACTGGCGGCAGCGGCGTGCTTTGCGCGGCGATGGCCCGGGAGCTAGCCCGGCATGGCATGAAGGTGGCGTTTTTGTATCGGATGGCGGAAACAGGcc                                                                                         >  5:65983/1‑137 (MQ=255)
                                                cggCTGCATGAGAACCTGGCGGGTAAAAGGGCTGTCTTCACGGGCGGCCGCGGCGTGCTTTGGGCTGCGAGGGCCCGGGAGCTAGCCGGGCATGGCATGAAGGTGGCGATTTTGAATCGGACGGCTGAAAAAGGCCAAg                                                                                      <  4:241445/137‑1 (MQ=255)
                                                 cGCTGCATGAGAACCTGGCTGGTAAAACGGCTGTCATCACTGGCGGCAGCGGCGTGGTTTGGTGTGCGCTGGCCCGGGGGCTAGCCCGGGCTGGCATGCACGGGGCGCTTTTGAATCCGGCGGCGGGAAAAGGCCAAgg                                                                                     >  1:279848/1‑138 (MQ=255)
                                                 cGCTGCATGAGAACCTGGCTGGTAAAACGGCTGTCATCACTGGCGGCAGCGGCGTGCTTTGCTCTGCGATGGCCCGGGAGCTAGCCCGTCATGGCATGAAGGTGGCGATTTTGAATCGGACGGCTGAAAAAGGCCAAg                                                                                      <  6:292077/138‑1 (MQ=255)
                                                 cGCTGCATGAGAACCTGGCTGGTAAAACGGCTGTCATCACTGGCGGCAGCGGCGTGCTTTGCTCTGCGAAGGCCCGGGAGCTAGCCCGTCATGGCATGAAGGTGGCGATTTTGAATCGGACGGCTGAAAAAGGCCAAg                                                                                      >  5:292077/1‑138 (MQ=255)
                                                        tGAGAACCTGGCTGGTAAAACGGCTGTCATCACTGGCGGCAGCGGCGTGCTTTGCTCTGCGATGGCCCGGGAGCTAGCCCGTCATGGCATGAAGGTGGCGATTTTGAATCGGACGGCGGAAAAAGGCCAAGCGGTCGTg                                                                              >  7:52095/1‑139 (MQ=255)
                                                          agaACCTGGCTGGTAAAACGGCTGTCATCACTGGCGGCAGCGGCGTGCTTTGCGCTGCGATGGCCCGGGAGCTAGCCCGTCATGGCATGAAGGTGGCGATTTTGAATCGGACGGCTGAAAAAGGCCAAGCGGTCGTGaa                                                                            <  5:364763/139‑1 (MQ=255)
                                                            aaCCTGGCTGGTAAAACGGCTGTCATCACTGGCGGCAGCGGCGTGCGTTGTTCTGCGATGGCCCGGGGGCTAGCCCGGCATGGCATGAAGGTGGCGTTTTTTTATGGGTCGGGGGTAAAAGGCCAAGCGGGCGTGGAgg                                                                          >  7:183226/1‑139 (MQ=255)
                                                              ccTGGCTGGTAAAACGGCTGTCATCACTGGCGGCAGCGGCGTGCTTTGCTCTGCGATGGCCCGGGAGCTAGCCCGTCATGGCATGAAGGTGGCGATTTTGAATCGGACGGCTGAAAAAGGCCAAGc                                                                                     <  2:267213/126‑1 (MQ=255)
                                                              ccTGGCTGGTAAAACGGCTGTCATCACTGGCGGCAGCGGCGTGCTTTGCTCTGCGATGGCCCGGGAGCTAGCCCGTCATGGCATGAAGGTGGCGATTTTGAATCGGACGGCTGAAAAAGGCCAAGc                                                                                     >  1:267213/1‑126 (MQ=255)
                                                              ccTGGCTGGTAAAACGGCTGTCATCACTGGCGGCAGCGGCGTGCGTTTCGCTGCGATGGCCCGGGCGCGAGCCCGGCATGGCCTGAAGGTGGCGATTTTGAATAGGCCCCCAGAAAAAATCCAAGCCGGCGTgtatggc                                                                        >  2:319436/1‑133 (MQ=255)
                                                                tggctggTAAAACGGCTGTCATCACTGGCGGCAGCGGCGTGCTTTTCTCTGGGATGGGCCGGGGGCTAGCCCGGGATGGCATGAACGGGGGGATTTTGTATCGGCGCGCCGATAAAGGCCAACCGGTCGTGAAGGatat                                                                      >  5:403716/1‑139 (MQ=255)
                                                                       tAAAACGGCTGTCATCACTGGCGGCAGCGGCGTGCTTTGCTCTGCGATGGCCCGGGAGCTAGCCCGTCATGGCATGAAGGGGGCGATTTTGAATCGGACGGCTGAAAAAGGCCAAGCGGTCGTGAAGGAGATAAcggcg                                                               <  8:361576/139‑1 (MQ=255)
                                                                         aaaCGGCTGTCATCACTGGCGGCAGCGGCGTGCTTTGCTCTGCGATGGCCCGGGAGCTAGCCCGTCATGGCATGAAGGTGGCGATTTTGAATCGGACGGCTGAAAAAGGCCAAGCGGTCGTGAAGGAGATAACggcggc                                                             <  8:339666/139‑1 (MQ=255)
                                                                         aaaCGGCTGTCATCACTGGCGGCAGCGGCGTGCTTTGCTCTGCGATGGCCCGGGAGCTAGCCCGTCATGGCATGAAGGTGGCGATTTTGAATCGGACGGCTGAAAAAGGCCAAGCGGTCGTGAAGGAGATAACggcggc                                                             <  8:27921/139‑1 (MQ=255)
                                                                           aCGGCTGTCATCACTGGCGGCAGCGGCGTGCTTTGCTCTGCGATGGCCCGGGAGCTAGCCCGTCATGGCATGAAGGTGGCGATTTTGAATCGGACGGCTGAAAAAGGCCAAGCGGTCGTGAAGGAGATAACGGCGGCta                                                           <  5:324762/139‑2 (MQ=255)
                                                                            cGGCTGTCATCACTGGCGGCAGCGGCGTGCTTTGCTCTGCGATGGCCCGGGAGCTAGCCCGTCATGGCATGAAGGTGGCGATTTTGAATCGGACAGCTGAAAAAGGCCAAGCgg                                                                                   >  1:2939/1‑114 (MQ=255)
                                                                            cGGCTGTCATCACTGGCGGCAGCGGCGTGCTTTGCTCTGCGATGGCCCGGGAGCTAGCCCGTCATGGCATGAAGGTGGCGATTTTGAATCGGACAGCTGAAAAAGGCCAAGCgg                                                                                   <  2:2939/114‑1 (MQ=255)
                                                                                 gTCCTCCCTGGCGGCTGCGGCGTGCGTTGCGCTGCGATGGCCCGGGAGCTAGCCCGTCATGGCATGAAGGTGGCGATTTTGAATCGGACGGCTGAAAAAGGCCAAGCGGTCGTGAAGGAGATAACGGCGGCTGGCGGca                                                     <  7:94545/139‑1 (MQ=255)
                                                                                 gTCATCACTGGCGGCAGCGGCGTGCTTTGCTCTGCGATGGCCCGGGAGCTAGCCCGTCATGGCATGAAGGTGGCGATTTTGAATCGGACGGCTGAAAAAGGCCAATCGGTCGTGAAGGAGATAACGGCGGCTGGCGGca                                                     >  3:57385/1‑139 (MQ=255)
                                                                                  tcatccCTGGCGGCAGCGGCGTGCTTTGCTCTGCGATGGCCCGGGAGCTAGCCCGTCATGGCATGAAGGTGGCGATTTTGAATCGGACGGCTGAAAAAGGCCAAGCGGTCGTGAAGGAGATAACGGCGGCTGGCGGca                                                     <  3:188283/138‑1 (MQ=255)
                                                                                  tcatcaCTGGCGGCAGCGGCGTGCTTTGCTCTGCGATGGCCCGGGAGCTAGCCCGTCATGGCATGAAGGTGGCGATTTTGAATCGGACGGCTGAAAAAGGCCAAGCGGTCGTGAAGGAGATAACGGCGGCTGGCGGcac                                                    <  1:85009/139‑1 (MQ=255)
                                                                                  tcatcaCTGGCGGCAGCGGCGTGCTTTGCTCTGCGATGGCCCGGGAGCTAGCCCGTCATGGCATGAAGGTGGCGATTTTGAATCGGACGGCTGAAAAAGGCCAAGCGGTCGTGAAGGAGATAACGGCGGCTGGCGGca                                                     <  3:190608/138‑1 (MQ=255)
                                                                                   catcaCTGGCGGCAGCGGCGTGCTTTGCTCTGCGATGGCCCGGGAGCTAGCCCGTCATGGCATGAAGGTGGCGATTTTGAATCGGACGGCTGAAAAAGGCCAAGCGGTCGTGAAGGAGATAACGGCGGCTGGCGGcaca                                                   <  4:187446/139‑1 (MQ=255)
                                                                                      caCTGGCGGCAGCGGCGTGCTTTGCTCTGCGAGGGCCCGGGAGCTAGCCCGTCATGGCATGAAGGTGGCGATTTTGAATCGGACGGCTGAAAAAGGCCAAGCGGTCGTGAAGGAGATAACGGCGGCTGGCGGCACAGCg                                                <  5:566/139‑1 (MQ=255)
                                                                                       aCTGGCGGCAGGGGCGTGCTTTGCTCTGCGATGGCCCGGGAGCTAGCCCGTCATGGCATGAAGGGGGCGATTTTGAATCGGACGGCTGAAAAAGGCCAAGCGGTCGTGAAGGAGATAACGGCGGCTGGCGGCACAGCg                                                <  3:401768/138‑1 (MQ=255)
                                                                                        cgggcggcAGCGGCGTGCGTTGCTCTGCGATGGCCCGGGAGCTAGCCCGGCATGGCATGAAGGTGGCGATTTTGAATCGGACGGCTGAAAAAGGCCAAGCGGTCGTGAAGGAGATAACGGCGGCTGGCGGCACAGCGTg                                              <  4:213517/137‑1 (MQ=255)
                                                                                        cTGGCGGCAGCGGCGTGCTTTGCTCTGCGATGGCCCGGGAGCTAGCCCGTCATGGCATGAAGGTGGCGATTTTGAATCGGACGGCTGAAAAAGGCCAAGCGGTCGTGAAGGAGATAACGGCGGCTGGCGGCACAGCGTg                                              <  2:279848/139‑1 (MQ=255)
                                                                                                aGCGGCGTGGTTTGCTCTGCGATGGCCCGGGCGCTAGCCCGGGATGGCATGAAGGTGGGGATTTTGAATAGGGCGGGGGCAAAAGGCCAAGCGGGCGTGGAGGCGATTACGGCGGGGGGCGGCCCCGCGTGCGCTGGtg                                      >  8:65173/1‑139 (MQ=255)
                                                                                                 gcggcgTGCTTTGCTCTGGGATGGCCCGGGAGCAAGCCCGTGATGGGAAGAAGGGGGCGATTTTTAATAGGACGGCTGAAAAAGGCCAAGCGGTCGTGCAGGAGATTACGGGGGCATGGGGCACCGCGTgggcgggttc                                     >  8:23776/1‑133 (MQ=255)
                                                                                                 gcggcgTGCTTTGCTCTGCGATGGCCCGGGAGCTAGCCCGTCATGGCATGAAGGTGGCGATTTTGAATCGGACGGCTGAAAAAGGCCAAGCGGTCGTg                                                                              >  4:142930/1‑98 (MQ=255)
                                                                                                 gcggcgTGCTTTGCTCTGCGATGGCCCGGGAGCTAGCCCGTCATGGCATGAAGGTGGCGATTTTGAATCGGACGGCTGAAAAAGGCCAAGCGGTCGTg                                                                              <  3:142930/98‑1 (MQ=255)
                                                                                                      gTGCTTTGCTCTGCGATGGCCCGGGAGCTAGCCCGTGATGGCATGAAGGTGGCGATTTTGAATCGGACGGCTGAAAAAGGCCAAGCGGGCGTGAAGGAGATAACGGCGGCTGGCTGCACAGCGTGCGCTGTTGCTGCgg                                <  6:403716/139‑1 (MQ=255)
                                                                                                      gTGCTTTGCTCTGCGATGGCCCGGGAGCTAGCCCGTCATGGCATGAAGGTGGCGATTTTGAATCGGACGGCTGAAAAAGGCCAAGCGGTCGTGAAGGAGATAACGGCGGCTGGCGGCACAGCGTGCGCTGTTGCTGCgg                                <  8:52095/139‑1 (MQ=255)
                                                                                                            tGCTCTGCGATGGCCCGGTAGCTAGCCCGTCATGGCATGAAGGTGGCGATTTTGTATCGGACGGCTGATAACGGCCAAGGGGTCGTGAAGGAGATAACGGCGGCTGGCGGGACAGCGTGCGCTGTTGCTGCGGAtgtg                           <  7:265638/138‑1 (MQ=255)
                                                                                                            tGCTCTGCGATGGCCCGGGAGCTAGCCCGTCATGGCATGAAGGTGGAGATTTTGAATCGGACGGCTGAAAAAGGCCAAGCGGTCGTGAAGGAGATAACGGCGGCTGGCGGCACAGCGTGCGCTGTTGCTGCGGAtgtg                           <  7:23776/138‑1 (MQ=255)
                                                                                                            tGCTCTGCGATGGCCCGGGAGCTAGCCCGTCATGGCATGAAGGGGGCGATTTTGAATCGGACGGCTGAAAAAGGCCAAGCGGTCGTGAAGGAGATAACGGCGGCTGGCGGCACAGCGTGCGCTGTTGCTGCGGAtgtg                           <  1:291911/138‑1 (MQ=255)
                                                                                                                 tGCGATGGCCCGGGAGCTAGCCCGTCATGGCATGAAGGTGGCGATTTTGAATCGGACGGCTGAAAAAGGCCAAGCGGTCGTGAAGGAGATAACGGCGGCTGGCGGCACAGCGTGCGCGGTTGCTGCGGATGTGCTGGa                      >  1:146377/1‑138 (MQ=255)
                                                                                                                     ctGGCCCGGGACGTAGCCCGTCATGGAATGATGGGGGCGATTTTGAATCGGACGGCTGAAAAAGGCCAAGCGGTCGTGAAGGAGATAACGGCGGCGGGCGGCACAGCGTGCGCTGTTGCTGCGGATGTGCTGGACAGGa                 <  6:215539/138‑1 (MQ=255)
                                                                                                                     aTGGCCCGGGAGCTAGCCCGTCATGGCATGAAGGTGGCGATTTTGAATCGGACGGCTGAAAAAGGCCAAGCGGTCGTGAAGGAGATAACGGCGGCTGGCGGCACAGCGTGCGCTGTTGCTGCGGATGTGCTGGACAGGa                 <  4:112590/139‑1 (MQ=255)
                                                                                                                     aTGGCCCGGGAGCTAGCCCGTCATGGCATGAAGGTGGCGATTTTGAATCGGACGGCTGAAAAAGGCCAAGCGGTCGTGAAGGAGATAACGGCGGCTGGCGGCACAGCGTGCGCTGTTGCTGCGGATGTGCTGGACAGGa                 <  5:279868/139‑1 (MQ=255)
                                                                                                                        gCCCGGGCGCTAGCCCGTCATGGCATGAAGGTGGCGATGTTGAGTCGGACGGCTGAAAAAGGCCAAGCGGTCGTGTAGGAGATTAAGGCGGCTGGCGGGCCAGCGGGCGCTGGGTCTGCGGAGGTGCTGGTCTGGgtgt              >  4:17910/1‑139 (MQ=255)
                                                                                                                        gCCCGGGAGCTAGCCCGTCATGGCATGAAGGTGGCGATTTTGAATCGGACGGCTGAAAAAGGCCAAGCGGTCGTGAAGGAGATAACGGCGGCTGGCGGCACAGCGTGCGCTGTTGCTGCGGATGTGCTGGACAGGATGt              >  3:106821/1‑139 (MQ=255)
                                                                                                                             ggAGCTAGCCCGTCATGGCATGAAGGTGGCGATTTTGAATCGGCCGGCTGAAAAAGGCCAAGCGGTCGTGAAGGAGATAACGGCGGCTGGCGGCACAGCGTGCGCTGTTGCGGCGGATGTGCTGGACAGGATGTccatg         >  7:113039/1‑135 (MQ=255)
                                                                                                                             ggAGCTAGCCCGTCATGGCATGAAGGTGGCGATTTTGAATCGGACGGCTGAAAAAGGCCAAGCGGTCGTGAAGGAGATAACGGCGGCTGGCGGCACAGCGTGCGCTGTTGCTGCGGATGTGCTGGACAGGa                 <  6:364953/131‑1 (MQ=255)
                                                                                                                             ggAGCTAGCCCGTCATGGCATGAAGGTGGCGATTTTGAATCGGACGGCTGAAAAAGGCCAAGCGGTCGTGAAGGAGATAACGGCGGCTGGCGGCACAGCGTGCGCTGTTGCTGCGGATGTGCTGGACAGGa                 >  5:364953/1‑131 (MQ=255)
                                                                                                                               aGCTAGCCCGTCATGGCATGAAGGTGGCGATTTTGAATCGGACGGCTGAAAAAGGCCAATCGGTCGTGAAGGAGATAACGGCGGCTGGCGGCACAGCGTGCGCTGTTGCTGCGGATGTGCTGGACAGGATGTCACTGGa       <  4:57385/139‑1 (MQ=255)
                                                                                                                                     cccGTCATGGCATGTAGGGGGCGATTTTGAATCTGACGGCTGAAAAAGGCCAAGCGGTCGTGAATGAGATAACGGCGGCGGGCGGCACATCTTGCGCTTTTGCTGCTTATGTGCTGGTCAGGATGTAACTGGAGCggg  <  8:343781/138‑1 (MQ=255)
                                                                                                                                         |                                                                                                                                     
GTGGGACGCTTATGAAGCAATGGCAAAAAAAGAGGTGGGCATATGATCCCGCTGCATGAGAACCTGGCTGGTAAAACGGCTGTCATCACTGGCGGCAGCGGCGTGCTTTGCTCTGCGATGGCCCGGGAGCTAGCCCGTCATGGCATGAAGGTGGCGATTTTGAATCGGACGGCTGAAAAAGGCCAAGCGGTCGTGAAGGAGATAACGGCGGCTGGCGGCACAGCGTGCGCTGTTGCTGCGGATGTGCTGGACAGGATGTCACTGGAGCGGG  >  CP006881/1269554‑1269824

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: