| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP006881 | 1,474,324 | C→A | 5.7% | intergenic (+123/‑22) | U712_07565 → / → U712_07570 | PTS system fructose‑specific EIIABC component/Signal peptidase I T |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 1,474,324 | 0 | C | A | 5.7% | 274.8 / 4.1 | 80 | intergenic (+123/‑22) | U712_07565/U712_07570 | PTS system fructose‑specific EIIABC component/Signal peptidase I T |
| Reads supporting (aligned to +/- strand): ref base C (35/40); new base A (2/3); total (37/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.17e-01 | |||||||||||
TACAGAAAAATAAGAAAAAAAGCGTCCTTGGTTCGAAAGGACGCTTTTTCTTATCCGGCCGGCAGGGAGCGCGGTTAAGTTATGTATTTTATTCTTTTTTATGATAAAGTAAAAGAAGAGAAACAACTGACATAGCAATTGTCTAGGAGGAAACACTTTGACCGAGGAAAAAAATACGAATACTGAGAAAACGGCGAAGAAAAAAACCAATACGTACCTGGAATGGGGTAAAGCGATTGTCATCGCTGTTCTGCTGGCTCTCCTGATCCGTCA > CP006881/1474189‑1474461 | taaaGAAAAATAAGAAAAAAAGCGTCCTTGGTTCGAAAGGACGCTTTTTCTTATCCGGCCGGCAGGGAGCGCGGTTAAGTTATGTATTTTATTCTTTTTTATGATAAAGTAAAAGAAGAGAAACAACTGACATAGCaa < 4:19974/135‑1 (MQ=255)tACAGAAAAATAAGAAAAAAAGCGTCCTTGGTTCGAAAGGACGCTTTTTCTTATCCGGCCGGCAGGGAGCGCGGTTAAGTTATGTATTTTATTCTTTTTTATGATAAAGTAAAAGAAGAGAAACAACTGACATAGCaa < 2:266503/138‑1 (MQ=255) gAAAAATAAGAAAAAAAGCGTCCTTGGTTCGAAAGGACGCTTTTTCTTATCCGGCCGGCAGGGAGCGCGGTTAAGTTATGTATTTTATTCTTTTTTATGATAAAGTAAAAGAAGAGAAACAACTGACATAGCaa > 1:296774/1‑134 (MQ=255) gAAAAATAAGAAAAAAAGCGTCCTTGGTTCGAAAGGACGCTTTTTCTTATCCGGCCGGCAGGGAGCGCGGTTAAGTTATGTATTTTATTCTTTTTTATGATAAAGTAAAAGAAGAGAAACAACTGACATAGCaa < 2:296774/134‑1 (MQ=255) ataaacaaaaaacGCGTCCTTGGTTCGAAAGGACGCTTTTTCTTATCCGGCCGGCAGTGAGCGCGGTTAAGTTATGTATTTTTTTCTTTTTTATGAAAAAGTAAAAGAAGAGAAACAACTGACATAGCAATTGTCTagg < 5:221269/133‑1 (MQ=255) ccaaaaaaaGCGTCCTTGGTTCGAAAGGACGCTTTTTCTTATCCGGCCGGCAGGGAGCGCGGTTAAGTTATGTATTTTATTCTTTTTTATGATAAAGTAAAAGAAGAGAAACAACTGACATAGCAATTGTCTAggagga < 2:265619/137‑1 (MQ=255) ataaaaaaaGCGTCCTTGGTTCGAAAGGACGCTTTTTCTTATCCGGCCGGCAGGGAGCGCGGTTAAGTTATGTATTTTATTCTTTTTTATGATAAAGTAAAAGAAGAGAAACAACTGACATAGCAATTGTCTAggagga < 3:55179/137‑1 (MQ=255) acaaaaaaaGCGTCCTTGGTTCGAAAGGACGCTTTTTCTTATCCGGCCGGCAGGGAGCGCGGTTAAGTTATGTATTTTATTCTTTTTTATGATAAAGTAAAAGAAGAGAAACAACTGACATAGCAATTGTCTAggagga < 7:111372/137‑1 (MQ=255) aGAAAAAAAGCGTCCTTGGTTCGAAAGGACGCTTTTTCTTATCCGGCCGGCAGGGAGCGCGGTTAAGTTATGTATTTTATTCTTTTTTATGATAAAGTAAAAGAAGAGAAACAACTGACATAGCAATTGTCTAggagga < 5:196546/139‑1 (MQ=255) aGAAAAAAAGCGTCCTTGGTTCGAAAGGACGCTTTTTCTTATCCGGCCGGCAGGGAGCGCGGTTAAGTTATGTATTTTATTCTTTTTTATGATAAAGTAAAAGAAGAGAAACAACTGACATAGCAATTGTCTAggagga < 2:171049/139‑1 (MQ=255) tCCTTGGTTCGAAAGGACGCTTTTTCTTATCCGGCCGGCAGGGAGCGCGGTTAAGTTATGTATTTTATTCTTTTTTATGATAAATTAAAAGAAGAGAAACAACTGACATAGCAATTGTCTAGGAGGAAACACTTTGAcc > 8:344139/1‑139 (MQ=255) tCGAAAGGACGCTTTTTCTTATCCGGCCGGCAGGGAGCGCGGTTTAGTTATGTATTTTATTCTTTTTTATGATAAAGTAAAAGAAGAGAAACAACTGACATAGCAATTGTCTAGGAGGAAACACTTTGACCGAGGaaa > 6:272023/1‑138 (MQ=255) gAAAGGACGCTTTTTCTTATCCGGCCGGCAGGGAGCGCGGTTAAGTTATGTATTTTATTCTTTTTTATGATAAAGTAAAAGAAGAGAAACAACTGACATAGCAATTGTCTAGGAGGAAACACTTTGACCGAGGaaaaa < 8:9918/138‑1 (MQ=255) aaaGGACGCTTTTTCTTATCCGGCCGGCAGGGAGCGCGGTTAAGTTATGTATTTTATTCTTTTTTATGATAAAGTAAAAGAAGAGAAACAACTGACATAGCaa < 5:329408/103‑1 (MQ=255) aaaGGACGCTTTTTCTTATCCGGCCGGCAGGGAGCGCGGTTAAGTTATGTATTTTATTCTTTTTTATGATAAAGTAAAAGAAGAGAAACAACTGACATAGCaa > 6:329408/1‑103 (MQ=255) aaaGGACGCTTTTTCTTATCCGGCCGGCAGGGAGCGCGGTTAAGTTATGTATTTTATTCTTTTTTATGATAAAGTAAAAGAAGAGAAACAACTGACATAGCAATTGTCTAGGAGGAAACACTTTGACCGAGGaaaaaa > 8:167453/1‑138 (MQ=255) gACGCTTTTTCTTATCCGGCCGGCAGGGAGCGCGGTTAAGTTATGTATTTTATTCTTTTTTATGATAAAGTAAAAGAAGAGAAACAACTGACATAGCAATTGTCTAGGAGGAACCACTTTGACCGAGGAAAAAAATAc > 6:312828/1‑138 (MQ=255) aCGCTTTTTCTTATGCGGCCGGCAGGGAGCGTGGTTAAGTTATGTATTTTATTATTTTTTATGATAAAGTAAAAGAAGAGAAACAACTGACATAGCAATTGTCTAGGAGGAAACACTTTGACCGAGGAAAAAAATACGa < 4:220661/139‑1 (MQ=255) aCGCTTTTTCTTATCCGGCCGGCAGGGAGCGCGTTTAAGTTATGTATTTTATTCTTTTTTATGATAAAGTAAAAGAAGAGAAACAACTGACATAGCAATTGTCTAGGAGGAAACACTTTGACCGAGGAAAAAAATACGa < 8:209991/139‑1 (MQ=255) cGCTTTTTCTTATCCGGCCGGCAGGGAGCGCGGTTAAGTTATGTATTTTATTCTTTTTTATGATAAAGTAAAAGAAGAGAAACAACTGACATAGCAATTGTCTAGGAGGAACCACGTTGACCGAGGaaaaa > 6:11787/1‑131 (MQ=255) cGCTTTTTCTTATCCGGCCGGCAGGGAGCGCGGTTAAGTTATGTATTTTATTCTTTTTTATGATAAAGTAAAAGAAGAGAAACAACTGACATAGCAATTGTCTAGGAGGAAACACTTTGACCGAGGaaaaa < 5:11787/131‑1 (MQ=255) cGCTTTTTCTTATCCGGCCGGCAGGGAGCGCGGTTAAGTTATGTATTTTATTCTTTTTTATGATAAAGTAAAAGAAGAGAAACAACTGACATAGCAATTGTCTAGGAGGAAACACTTTGACCGAGGAAAAAAATACGaa > 4:331107/1‑139 (MQ=255) ccggccggCAGGGAGCGCGGTTAAGTTATGTATTTTATTCTTTTTTATGATAAAGTAAAAGAAGAGAAACAACTGACATAGCAATTGTCTAGGAGGAAACACTTTGACCGAGGAAAAAAATACGAATACTGAGAAAACg > 3:136278/1‑139 (MQ=255) ccggcAGGGAGCGCGGTTAAGTTATGTATTTTATTCTTTTTTATGATAAAGTAAAAGAAGAGAAACAACTGACATAGCAATTGTCTAGGAGGAAACACTTTGACCGAGGAAAAAAATACGAATACTGAGAAAACGGCg > 1:204118/1‑138 (MQ=255) ccggcAGGGAGCGCGGTTAAGTTATGTATTTTATTCTTTTTTATGATAAAGTAAAAGAAGAGAAACAACTGACATAGCAATTGTCTAGGAGGAAACACTTTGACCGAGGAAAAAAATACGAATACTGAGAAAACGGCg > 8:70735/1‑138 (MQ=255) agtgAGCGCGGTTAAGTTATGTATTTTATTCTTTTTTATGATAAAGTAAAAGAAGAGAAACAACTGACATAGCAATTGTCTAGGAGGAAACACTTTGACCGAGGAAAAAAATACGAATACTGAGAAAACGGCGAAGaaa < 8:224672/136‑1 (MQ=255) aGGGAGCGCGGTTAAGTTATGTATTTTATTCTTTTTTATGATAAAGTAAAAGAAGAGAAACAACTGACATAGCAATTGTCTAGGAGGAAACACTTTGACCGAGGAAAAAAATACGAATACTGAGAAAACGGCGAAGaaa < 1:97398/139‑1 (MQ=255) ggAGCGCGGTTAAGTTATGTATTTTATTCTTTTTTATGATAAAGTAAAAGAAGAGAAACAACTGACATAGCAATTGTCTAGGAGGAAACACTTTGACCGAGGAAAAAAATACGAATACTGAGAAAACGGCGAAGaaaaa < 8:18804/139‑1 (MQ=255) ggAGCGCGGTTAAGTTATGTATTTTATTCTTTTTTATGATAAAGTAAAAGAAGAGAAACAACTGACATAGCAATTGTCTAGGAGGAAACACTTTGACCGAGGAAAAAAATACGAATACTGAGAAAACGGCGAAGaaaa > 7:276620/1‑138 (MQ=255) ggAGCGCGGTTAAGTTATGTATTTTATTCTTTTTTATGATAAAGTAAAAGAAGAGAAACAACTGACATAGCAATTGTCTAGGAGGAAACACTTTGACCGAGGAAAAAAATACGAATACTGAGAAAACGGCGAAGaaaa > 7:250317/1‑138 (MQ=255) aGCGCGGTTAAGTTATGTATTTTATTCTTTTTTATGATAAAGTAAAAGAAGAGAAACAACTGACATAGCAATTGTCTAGGAGGAAACACTTTGACAGAGGAAAAAAATACGAATACTGAGAAAACGGCGAAGaaaaaaa > 8:42118/1‑139 (MQ=255) cgGTTAAGTTATGTATTTTATTCTTTTTTATGATAAAGTAAAAGAAGAGAAACAACTGACATAGCAATTGTCTAGGAGGAAACACTTTGACCGAGGAAAAAAATACGAATACTGAGAAAACGGCGAAGAAAAAAACCaa > 3:193626/1‑139 (MQ=255) agTTAAGTTATGTATTTTATTCTTTTTTATGATAAAGTAAAAGAAGAGAAACAACTGACATAGCAATTGTCTAGGAGGAAACACTTTGACCGAGGAAAAAAATACGAATACTGAGAAAACGGCGAAGAAAAAAACCaa > 8:225494/2‑138 (MQ=255) gTTATGTAATGTTTTTTATTCTTTTTTTTGAAAAAGTAAAAGAATATAAACAACTGACATAGAAATTTTATAGGAGGAAACACTTTGACCGTGGAAAAAAATACGAATACTGAGAAAACGGCGAAGAAAAAAACCAATa < 4:219238/139‑1 (MQ=255) ttAAGTTATGTATTTTATTGTTTTTTATGATAAAGTAAAAGAAGAGAAACAACTGACATAGCAATTGTCTAGGAGGAAACACTTTGACCGAGGAAAAAAATACGAATACTGAGAAAACGGCGAAGAAAAAAACCAATAc < 5:165863/139‑1 (MQ=255) ttAAGTTATGTATTTTATTCTTTTTTATGATAAAGTAAAAGAAGAGAAACAACTGACATAGCAATTGTCTAGGAGGAAACACTTTGACCGAGGAAAAAAATACGAATACTGAGAAAACGGCGAAGAAAAAAACCAATAc < 7:70735/139‑1 (MQ=255) aaGTTATGTATTTTATTCTTTTTTATGATAAAGTAAAAGAAGAGAAACAACTGACATAGCAATTGTCTAGGAGGAAACACTTTGACCGAGGAAAAAAATACGAATACTGAGAAAACGGCGAAGAAAAAAACCAATACg < 4:345209/138‑1 (MQ=255) aGTTATGTATTTTATTCTTTTTTATGATAAAGTAAAAGAAGAGAAACAACTGACATAGCAATTGTCTAGGAGGAAACACTTTGACCGAGGAAAAAAATACGAATACTGAGAAAACGGCGAAGAAAAAAACCAATACGTa > 6:351382/1‑139 (MQ=255) aGTTATGTATTTTATTCTTTTTTATGATAAAGTAAAAGAAGAGAAACAACTGACATAGCAATTGTCTAGGAGGAAACACTTTGACCGAGGAAAAAAATACGAATACTGAGAAAACGGCGAAGAAAAAAACCAATACGTa > 1:359879/1‑139 (MQ=255) aGTTATGTATTTTATTCTTTTTTATGATAAAGTAAAAGAAGAGAAACAACTGACATAGAAATTGTCTAGGAGGAAACACTTTGACCGAGGAAAAAAATACGAATACTGAGAAAACGGCGAAGAAAAAAACCAATACGTa > 2:243480/1‑139 (MQ=255) aGTTATGTATTTTATTCTTTTTTATGATAAAGTAAAAGAAGAGAAACAACTGACATAGAAATTGTCTAGGAGGAAACACTTTGACCGAGGAAAAAAATACGAATACTGAGAAAACGGCGAAGAAAAAAACCAATACGTa > 2:237598/1‑139 (MQ=255) ttATGTATTTTATTCTTTTTTATGATAAAGTAAAAGAAGAGAAACAACTGACATAGCAATTGTCTAGGAGGAAACACTTTGACCGAGGAAAAAAATACGAATACTGAGAAAACGGCGAAGAAAAAAACCAATACGTAcc < 7:225494/139‑1 (MQ=255) tATGTATTTTATTCTTTTTTATGATAAACTAAAAGAAGAGAAACAACTGACATAGCAATTGTCTAGGAGGAAACACTTTGACCGAGGAAAAAAATACGAATACTGAGAAAACGGCGAAGAAAAAAACCAATACGTAcc < 1:316472/138‑1 (MQ=255) tGTATTTTATTCTTTTTTATGATAAAGTAAAAGAAGAGAAACAACTGACATAGCAATTGTCTAGGAGGAAACACTTTGACCGAGGAAAAAAATACGAATACTGAGAAAACGGCGAAGAAAAAAACCAATACGTAcc < 5:120315/136‑1 (MQ=255) tGTATTTTATTCTTTTTTATGATAAAGTAAAAGAAGAGAAACAACTGACATAGCAATTGTCTAGGAGGAAACACTTTGACCGAGGAAAAAAATACGAATACTGAGAAAACGGCGAAGAAAAAAACCAATACGTAcc > 6:120315/1‑136 (MQ=255) tGTATTTTATTCTTTTTTATGATAAAGTAAAAGAAGAGAAACAACTGACATAGCAATTGTCTAGGAGGAAACACTTTGACCGAGGAAAAAAATACGAATACTGAGAAAACGGCGAAGAAAAAAACCAATACGTACCTg > 6:88650/1‑138 (MQ=255) tGTATTTTATTCTTTTTTATGATAAAGTAAAAGAAGAGAAACAACTGACATAGCAATTGTCTAGGAGGAAACACTTTGACCGAGGAAAAAAATACGAATACTGAGAAAACGGCGAAGAAAAAAACCAATACGTACCTg > 8:366607/1‑138 (MQ=255) tATTTTATTCTTTTTTATTATAAAGTAAAAGAAGAGAAACAACTGACATAGCAATTGTCTAGGAGGAAACACTTTGACCGAGGAAAAAAATACTAATACTGAGAAAACGGCGAAGAAAAAAACCAATACGTACCTGGa < 5:378901/138‑1 (MQ=255) tATTTTATTCTTTTTTATGATAAAGTAAAAGAAGAGAAACAACTGACATAGCAATTGTCTAGGAGGAAACACTTTGACCGAGGAAAAAAATACGAATACTGAGAAAACGTCGAAGAAAAAAACCAATACGTACCTGGaa > 1:55894/1‑139 (MQ=255) tATTTTATTCTTTTTTATGATAAAGTAAAAGAAGAGAAACAACTGACATAGCAATTGTCTAGGAGGAAACACTTTGACCGAGGAAAAAAATACGAATACTGAGAAAACGGCGAAGAAAAAAACCAATACGTACCTGGaa > 2:51920/1‑139 (MQ=255) tATTTTATTCTTTTTTATGATAAAGTAAAAGAAGAGAAACAACTGACATAGCAATTGTCTAGGAGGAAACACTTTGACCGAGGAAAAAAATACGAATACTGAGAAAACGGCGAAGAAAAAAACCAATACGTACCTGGaa > 4:193327/1‑139 (MQ=255) tATTTTATTCTTTTTTATGATAAAGTAAAAGAAGAGAAACAACTGACATAGCAATTGTCTAGGAGGAAACACTTTGACCGAGGAAAAAAATACGAATACTGAGAAAACGGCGAAGAAAAAAACCAATACGTACCTGGa < 1:26414/138‑1 (MQ=255) tATTTTATTCTTTTTTATGATAAAGTAAAAGAAGAGAAACAACTGACATAGAAATTGTCTAGGAGGAAACACTTTGACCGAGGAAAAAAATACGAATACTGAGAAAACGGCGAAGAAAAAAACCAATACGTACCTGGaa < 1:243480/139‑1 (MQ=255) aTTTTATTCTTTTTTATGATAAAGTAAAAGAAGAGAAACAACTGACATAGCAATTGTCTAGGAGGAAACACTTTGACCGAGGAAAAAAATACGAATACTGAGAAAACGGCGAAGAAAAAAACCAATACGTACCTGGaa < 5:153882/138‑1 (MQ=255) aTTTTATTCTTTTTTATGATAAAGTAAAAGAAGAGAAACAACTGACATAGAAATTGTCTAGGAGGAAACACTTTGACCGAGGAAAAAAATACGAATACTGAGAAAACGGCGAAGAAAAAAACCAATACGTACCTGGaa < 1:237598/138‑1 (MQ=255) ttttATTCTTTTTTATGATAAAGTAAAAGAAGAGAAACAACTGACATAGCAATTGTCTAGGAGGAAACACTTTGACCGAGGAAAAAAATACGAATACTGAGAAAACGGCGAAGAAAAAAACCAATACGTACCTGGAAt < 2:359879/138‑1 (MQ=255) ttttATTCTTTTTTATGATAAAGTAAAAGAAGAGAAACAACTGACATAGCAATTGTCTAGGAGGAAACACTTTGACCGAGGAAAAAAATACGAATACTGAGAAAACGGCGAAGAAAAAAACCAATACGTACCTGGAATg > 1:7298/1‑139 (MQ=255) tttATTCTTTTTTATGATAAAGTAAAAGAAGAGAAACAACTGACATAGCAATTGTCTAGGAGGAAACACTTTGACCGAGGAAAAAAATACGAATACTGAGAAAACGGCGAAGAAAAAAACCAATACg > 1:309854/1‑127 (MQ=255) tttATTCTTTTTTATGATAAAGTAAAAGAAGAGAAACAACTGACATAGCAATTGTCTAGGAGGAAACACTTTGACCGAGGAAAAAAATACGAATACTGAGAAAACGGCGAAGAAAAAAACCAATACg < 2:309854/127‑1 (MQ=255) ttATTCTTTTTTATGATAAAGTAAAAGAAGAGAAACAACTGACATAGCAATTGTCTAGGAGGAAACACTTTGACCGAGGAAAAAAATACGAATACTGAGAAAACTGCGAAGAAAAAAACCAATACGTACCTGGAATggg > 5:61139/1‑139 (MQ=255) tATTCTTTTTTATGATAAAGTAAAAGAAGAGAAACAACTGACATAGCAATTGTCTAGGAGGAAACACTTTGACCGAGGAAAAAAATACGAATACTGAGAAAACGGCGAAGAAAAAAACCAATACGTACCTGGAATgggg > 5:13204/1‑139 (MQ=255) tGATAAAGTAAAAGAAGAGAAACAACTGACATAGCAATTGTCTAGGAGGAAACACTTTGACCGAGGAAAAAAATACGAATACTGAGAAAACGGCGAAGAAAAAAACCAATACGTACCTGGAATGGGGTAAAGCGATTGt < 5:351382/139‑1 (MQ=255) tGATAAAGTAAAAGAAGAGAAACAACTGACATAGCAATTGTCTAGGAGGAAACACTTTGACCGAGGAAAAAAATACGAATACTGAGAAAACGGCGAAGAAAAAAACCAATACGTACCTGGAATGGGGTAAAGCGATTGt < 5:272023/139‑1 (MQ=255) aattAAAAGAAGAGAAACAACTGACATAGCAATTGTCTAGGAGGAAACACTTTGACCGAGGAAAAAAATACGAATACTGAGAAAACGGCGAAGAAAAAAACCAATACGTACCTGGAATGGGGTAAAGCGATTGTCATCg < 6:252745/136‑1 (MQ=255) aaGTAACACACGCGAAACAACTGACATAGCAATTGGCTAGGAGGAAACACTTTGACCGAGGAAAAAAATACGAATACTGAGAAAACGGCGAAGAAAAAAACCAATACGTACCTGGAATGGGGTAAAGCGATTGTCATCg < 5:271082/139‑1 (MQ=255) aaGTAAAAGAAGAGAAACAACTGACATAGCAATTGTCTAGGATGAAACACTTTGACCGAGGAAAAAAATACGAATACTGAGAAAACGGCGAAGAAAAAAACCAATACGTACCTGGAATGGGGTAAAGCGATTGTCATCg < 6:333219/139‑1 (MQ=255) aaGTAAAAGAAGAGAAACAACTGACATAGCAATTGTCTAGGAGGAAACACTTTGACCGAGGAAAAAAATACGAATGCTGAGAAAACGGCGAAGAAAAAAACCAATACGTACCTGGAATGGGGTAAAGCGATTGTCATCg < 3:331107/139‑1 (MQ=255) aaGTAAAAGAAGAGAAACAACTGACATAGCAATTGTCTAGGAGGAAACACTTTGACCGAGGAAAAAAATACGAATACTGAGAAAACGGCGAAGAAAAAAACCAATa < 3:179271/106‑1 (MQ=255) aaGTAAAAGAAGAGAAACAACTGACATAGCAATTGTCTAGGAGGAAACACTTTGACCGAGGAAAAAAATACGAATACTGAGAAAACGGCGAAGAAAAAAACCAATa > 4:179271/1‑106 (MQ=255) aaGTAAAAGAAGAGAAACAACTGACATAGCAATTGGCTAGGAGGAAACACTTTGACCGAGGAAAAAAATACGAATACTGAGAAAACGGCGAAGAAAAAAACCAATACGTACCTGGAATGGGGTAAAGCGATTGTCATCg < 2:63140/139‑1 (MQ=255) aaaCAACTGACATAGCAATTGTCTAGGAGGAAACACTTTGACCGAGGAAAAAAATACGAATACTGAGAAAACGGCGAAGAAAAAAACCAATACGTACCTGGAATGGGGTAAAGCGATTGTCATCGCTGTTCTGCTGGct < 3:157873/139‑1 (MQ=255) gACATAGCAATTGTCTAGGAGGAAACACTTTGACCGAGGAAAAAAATACGAATACTGAGAAAACGGCGAAGAAAAAAACCAATACGTACCTGGAATGGGGTAAAGCGATTGTCAt > 2:128117/1‑115 (MQ=255) gACATAGCAATTGTCTAGGAGGAAACACTTTGACCGAGGAAAAAAATACGAATACTGAGAAAACGGCGAAGAAAAAAACCAATACGTACCTGGAATGGGGTAAAGCGATTGTCAt < 1:128117/115‑1 (MQ=255) aGCAATTGTCTAGGAGGAAACACTTTGACCGAGGAAATAAATACGAATACTGAGAAAACGGCGAAGAAAAAAACCAATACGTACCTGGAATGGGGTAAAGCGATTGTCATCGCTGTTCTGCTGGCTCTCCTGATCCGt > 4:384244/1‑138 (MQ=255) aGCAATTGTCTAGGAGGAAACACTTTGACCGAGGAAAAAAATACGAATACTGAGAAAACGGCGAAGAAAAAAAcc > 7:287935/1‑75 (MQ=255) aGCAATTGTCTAGGAGGAAACACTTTGACCGAGGAAAAAAATACGAATACTGAGAAAACGGCGAAGAAAAAAAcc < 8:287935/75‑1 (MQ=255) aGCAATTGTCTAGGAGGAAACACTTTGACCGAGGAAAAAAATACGAATACTGAGAAAACGGCGAAGAAAAAAACCAATACGTACCTGGAATGGGGTAAAGCGATTGTCATCGCTGTTCTGCTGGCTCTCCTGATCCGTc > 6:352439/1‑139 (MQ=255) gCAATTGTCTAGGAGGAAACACTTTGACCGAGGAAAAAAATACGAATACTGAGAAAACGGCGAAGAAAAAAACCAATa < 6:24900/78‑1 (MQ=255) gCAATTGTCTAGGAGGAAACACTTTGACCGAGGAAAAAAATACGAATACTGAGAAAACGGCGAAGAAAAAAACCAATa > 5:24900/1‑78 (MQ=255) gCAATTGTCTAGGAGGAAACACTTTGACCGAGGAAAAAAATACGAATACTGAGAAAACGGCGAAGAAAAAAACCAATACGTACCTGGAATGGGGTAAAGCGATTGTCATCGCTGTTCTGCTGGCTCTCCTGATCCGTCa > 1:300543/1‑139 (MQ=255) | TACAGAAAAATAAGAAAAAAAGCGTCCTTGGTTCGAAAGGACGCTTTTTCTTATCCGGCCGGCAGGGAGCGCGGTTAAGTTATGTATTTTATTCTTTTTTATGATAAAGTAAAAGAAGAGAAACAACTGACATAGCAATTGTCTAGGAGGAAACACTTTGACCGAGGAAAAAAATACGAATACTGAGAAAACGGCGAAGAAAAAAACCAATACGTACCTGGAATGGGGTAAAGCGATTGTCATCGCTGTTCTGCTGGCTCTCCTGATCCGTCA > CP006881/1474189‑1474461 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |