| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP006881 | 2,370,844 | A→G | 5.1% | K111R (AAA→AGA) | U712_12015 → | HTH‑type transcriptional regulator sinR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 2,370,844 | 0 | A | G | 5.1% | 236.2 / 3.8 | 78 | K111R (AAA→AGA) | U712_12015 | HTH‑type transcriptional regulator sinR |
| Reads supporting (aligned to +/- strand): ref base A (26/48); new base G (2/2); total (28/50) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.15e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.01e-01 | |||||||||||
AGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAATTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGCCCAGTATATGAATACTGGGCCGTCT > CP006881/2370709‑2370930 | agaAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAATTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAag < 6:131690/138‑1 (MQ=255) cATGAAACCGAATACTATGGTCAATTAGATAGTGAATGGGAGAAATTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGagt < 8:296860/139‑1 (MQ=255) aTGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAATTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGagta < 6:91689/139‑1 (MQ=255) aTGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAATTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGagta < 2:277490/139‑1 (MQ=255) tGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAATTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGagtag < 4:394408/139‑1 (MQ=255) aaCCGAATACGATGGTCAATTAGATACTGAATGGGAGAAAGTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGc < 5:16894/139‑1 (MQ=255) aaTACGATGGTCAATTAGATAGTGAATGGGAGAAATTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAg > 2:113879/1‑139 (MQ=255) tACGATGGTCAATTAGATAGTGAATGGGAGAAATTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTCAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCa < 8:186340/139‑1 (MQ=255) tACGATGGTCAATTAGATAGTGAATGGGAGAAATTGGATCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCa < 7:403379/139‑1 (MQ=255) cGATGGTCAATTAGATAGTGAATGGGAGAAATTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCaga < 7:47499/139‑1 (MQ=255) tGGTCAATTAGATAGTGAATGGGAGAAATTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAgg > 6:138412/1‑138 (MQ=255) tGGTCAATTAGATAGTGAATGGGAGAAATTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAgg > 7:371839/1‑138 (MQ=255) tGGTCAATTAGATAGTGAATGGGAGAAATTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGc < 1:212000/139‑1 (MQ=255) tCAATTAGATAGTGAATGGTAGAAATTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCaga < 5:269732/133‑1 (MQ=255) tCAATTAGATAGTGAATGGGAGAAATTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCaga > 6:269732/1‑133 (MQ=255) tCAATTAGATAGTGAATGGGAGAAATTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCAc > 3:15308/1‑138 (MQ=255) tCAATTAGATAGTGAATGGGAGAAATTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACt < 7:58548/139‑1 (MQ=255) tAGTGAATGGGAGAAATTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCctct > 3:43763/1‑139 (MQ=255) aGTGAATGGGAGAAATTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGagt > 5:286708/1‑109 (MQ=255) aGTGAATGGGAGAAATTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGagt < 6:286708/109‑1 (MQ=255) aGTGAATGGGAGAAATTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCtt > 7:306418/1‑139 (MQ=255) gTGAATGGGAGAAATTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCtt < 4:64247/138‑1 (MQ=255) tGAATGGGAGAAATTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTTAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGagt < 1:272211/107‑1 (MQ=255) tGAATGGGAGAAATTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAACTCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCtttt > 6:306943/1‑139 (MQ=255) tGAATGGGAGAAATTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGagt > 2:272211/1‑107 (MQ=255) tGAATGGGAGAAATTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTaa > 6:217737/1‑129 (MQ=255) tGAATGGGAGAAATTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTaa < 5:217737/129‑1 (MQ=255) tGAATGGGAGAAATTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCtttt > 8:88618/1‑139 (MQ=255) tGAATGGGAGAAATTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCtttt > 1:255740/1‑139 (MQ=255) tGAATGGGAGAAATTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGAGCCTGAGCAGAGGCACTAACTCCTCtttt > 1:51083/1‑139 (MQ=255) aaTGGGAGAAATTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGagtag < 4:194215/107‑1 (MQ=255) aaTGGGAGAAATTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGagtag > 3:194215/1‑107 (MQ=255) aaTGGGAGAAATTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGt > 5:68556/1‑139 (MQ=255) aaTGGGAGAAATTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGt > 1:101485/1‑139 (MQ=255) aaTGGGAGAAATTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGt > 7:50790/1‑139 (MQ=255) aaTGGGAGAAATTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGt > 7:46180/1‑139 (MQ=255) ggAGAAATTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGagt > 5:170322/1‑101 (MQ=255) ggAGAAATTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGagt < 6:170322/101‑1 (MQ=255) aaaTTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAAc > 4:109173/1‑138 (MQ=255) aTTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAGAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCAt > 7:236199/1‑139 (MQ=255) aTTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAGAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCAt > 7:242119/1‑139 (MQ=255) aTTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCaga > 2:393801/1‑109 (MQ=255) aTTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCaga < 1:393801/109‑1 (MQ=255) ttCGCGATTCGATGACATCCGGGTTATCTAAAAAACAATTTCTTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCgaga < 7:249/139‑1 (MQ=255) ttCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAGAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCgaga < 8:236199/139‑1 (MQ=255) ttCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAGAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCgaga < 8:242119/139‑1 (MQ=255) ttCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCgaga < 7:167996/139‑1 (MQ=255) gcgatgcgatGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACgg < 8:306418/139‑1 (MQ=255) gcgatgcgatGACATCCGGCGTATCGAAAAAACAATATCGTTAATTTTTAGATTATCAAAAATTGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACg < 6:303244/138‑1 (MQ=255) gatgcgatgACATCCGTGGTATCGAAAAAACAATTTCGTTAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGTAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGcc < 1:179075/139‑1 (MQ=255) gatgcgatgACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGcc < 8:371839/139‑1 (MQ=255) gatgcgatgACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGcc < 8:254935/139‑1 (MQ=255) gatgcgatgACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGcc < 7:88618/139‑1 (MQ=255) gaggcgatgACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGcc < 8:295032/136‑1 (MQ=255) gagccgatgACATCCGGGGTAGCGAAAAAACAATTTCGTGAATTTTAACAATATCAAAAATGGAGAAAAACCCAAAACCAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGCGACGGcc < 8:255901/135‑1 (MQ=255) tgcgatgACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGccc < 5:138412/138‑1 (MQ=255) tgcgatgACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGccc < 3:280335/138‑1 (MQ=255) tccgatgACATCCGGGTTATCTAAAAAACAATTTCGTTAATTTTTAGATTATCAAAAATGCAGAAAATCCCAAAAAGAGGTGTAGTGCCTTAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGccc < 3:341751/136‑1 (MQ=255) gcgatgACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGCCCAg < 5:126439/139‑1 (MQ=255) gcgatgACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAAGGGAGAAACTCCCAAAAAGCGGATTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATACCCATCGCGACGGCCCAg < 5:51116/139‑1 (MQ=255) gcgatgAAATCGGTGTTATCTAAAAACAAATTTCTATAATTTTTTCATTTTCAAAAATGGTTAAATTCACAAAAAGTGGTGTAGTGCCTTAGAAGAGGCACTAACTCCTATTTTGTCTATAACCATCGAGACGGCCCAg < 8:148927/139‑1 (MQ=255) cgatgACATCCGGGGTCTCGAAAAAACAATTTCGTTAATTTTTATATTATAAAAAATGGATAAAATCCCAAAAAGAGCAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTTTAATAAACCATCGAGACGGCCCAg < 3:2491/138‑1 (MQ=255) cgatgACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGCCCAg < 2:101485/138‑1 (MQ=255) cgatgACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGCCCAg < 6:173652/138‑1 (MQ=255) cgatgACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGCCCAg < 3:235124/138‑1 (MQ=255) cgatgACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGCCCAg < 4:207766/138‑1 (MQ=255) cgatgACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGCCCAg < 5:28236/138‑1 (MQ=255) cgatgACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGCCCAg < 6:68556/138‑1 (MQ=255) cgatgACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGCCCAg < 6:154535/138‑1 (MQ=255) aCATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGCCCAGTatat < 7:18826/138‑1 (MQ=255) aCATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGAGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGCCCAGTatat < 2:51083/138‑1 (MQ=255) cATCCGGGTTAACCAAAAAACAATTTCGTTAATTTTTAGATTATAAAAAATGGATAAAATCCCAAAAAGAGCAGTAGGGCCTGAGCAGAGGCACTAACTCCTCTTTTGTAAATAACCATCGAGACGGCCCAGTATATGa < 5:9275/139‑1 (MQ=255) cGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTAGTCAATAACAATCGAGACGGCCCCGGAAATGAATa > 3:295331/1‑138 (MQ=255) cGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTACTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGCCCAGTATATGaactg > 3:75528/1‑136 (MQ=255) ggTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGCCCAGGATATGAATACTgg > 3:395918/1‑139 (MQ=255) aaaaaaCAATTTCGTTAATTTTTATATAATAAAAAAGGGACAAAACCCCAAAAAGCGTCGTAGGGCCGGCCCAGCGCCAAAAACTCCTTTTTTGTAAAAACCCATCGCCACGGCCCAGTATATGAATACTGGGCCGtct < 4:43763/139‑1 (MQ=255) agaAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGccc < 3:257541/77‑1 (MQ=255) agaAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGccc > 4:257541/1‑77 (MQ=255) | AGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAATTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATCCCAAAAAGAGGAGTAGTGCCTGAGCAGAGGCACTAACTCCTCTTTTGTCAATAACCATCGAGACGGCCCAGTATATGAATACTGGGCCGTCT > CP006881/2370709‑2370930 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |