| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP006881 | 2,466,472 | A→T | 5.4% | F12I (TTC→ATC) | U712_12585 ← | putative lipoprotein yqeF |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 2,466,472 | 0 | A | T | 5.4% | 229.4 / 3.5 | 74 | F12I (TTC→ATC) | U712_12585 | putative lipoprotein yqeF |
| Reads supporting (aligned to +/- strand): ref base A (33/37); new base T (2/2); total (35/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.70e-01 | |||||||||||
GCTCAGCTGTTTTTAATATATTGACCCACTGCTGTGCTTTTGGATAATCGCGATAATCCCAATTAGAGCCACGCGTATTACTGTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACTTTAATGTTATACCTCTGTTTCTCTTCGTTCAATGAAGAGTTTTTCGCTATCACTGTTTTTTCCTATAGTTAACGTGTCCC > CP006881/2466334‑2466609 | gcTCAGCTGTTTTTAATATATTGACCCACTGCTGTGCTTTTGGATAATCGCGATAATCCCAATTAGAGCCACGCGTATTACTGTCACCAAATGCTACAAGGTCTTCGTATCCCCTTCCCTCGGATCCTGCTGTAACGaa < 4:255494/139‑1 (MQ=255)gcTCAGCTGTTTTTAATATATTGACACCCTTCTGTGCTTTTGGATAATCGAGATAATCCCAATTAGAGCCACGCGTATTACTGTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGaa < 5:395440/139‑1 (MQ=255) cTCAGCTGTTTTTAATATATTGACCCACTGCTGTGCTTTTGGATAATCGCGATAATCCCAATTAGAGCCACGCGTATTACTGTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGaa > 7:24605/1‑138 (MQ=255) cTCAGCTGTTTTTAATATATTGACCCACTGCTGTGCTTTTGGATAATCGCGATAATCCCAATTAGAGCCACGCGTATTACTGTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGATGTAAAGaa > 8:338380/1‑138 (MQ=255) cTCAGCTGTTTTTAATATATTGACCCAATGCTGTGCTTTTGGATAATCGCGATAAACCCAATAAGAGCCACGCGTATTACTGTCACCAAATCCTACAACGTCTTCGTATCCCCTTCCATCGCATCCTGCTGAAACGaa > 1:36996/1‑138 (MQ=255) aGCTGTTTTTAATATATTGACCCACTGCTGTGCTTTTGGATAATCGCGATAATCCCAATTAGAGCCACGCGTATTACTGTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAAcag > 8:326959/1‑138 (MQ=255) aGCTGTTTTTAATATATTGACCCACTGCTGTGCTTTTGGATAATCGCGATAATCCCAATTAGAGCCACGCGTATTACTGTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAAcag < 6:350159/138‑1 (MQ=255) tttttAATATATTGACCCACTGCTGTGCTTTTGGATAATCGCGATAATCCCAATTAGAGCCACGCGTATTACTGTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAg > 4:96109/1‑139 (MQ=255) aaTATATTGACCCACTGCTGTGCTTTTGGATAATCGCGATAATCCCAATTAGAGCCACGCGTATTACTGTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGATCAGCAGAAGaaa > 1:14610/1‑137 (MQ=255) aaTATATTGACCCACTGCTGTGCTTTTGGATAATCGCGATAATCCCAATTAGAGCCACGCGTATTACTGTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGATCAGCAGAAGaaa > 1:21118/1‑137 (MQ=255) atTGACCCACTGCTGTGCTTTTGGATAATCGCGATAATCCCAATTAGAGCCACGCGTATTACTGTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGgat > 4:106831/1‑138 (MQ=255) ctgctgTGCTTTTGGATAATCGCGATAATCCCAATTAGAGCCACGCGTATTACTGTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGt < 4:149471/139‑1 (MQ=255) gctgTGCTTTTGGATAATCGCGATAATCCCAATTAGAGCCACGCGTATTACTGTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGttt > 5:400130/1‑139 (MQ=255) ctgTGCTTTTGGATAATCGCGATAATCCCAATTAGAGCCACGCGTATTACTGTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGttt < 8:381912/138‑1 (MQ=255) ctgTGCTTTTGGATAATCGCGATAATCCCAATTAGAGCCACGCGTATTACTGTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGttt < 7:313314/138‑1 (MQ=255) ctgTGCTTTTGGATAATCGCGATAATCCCAATTAGAGCCACGCGTATTACTGTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGttt < 5:388553/138‑1 (MQ=255) ctgTGCTTGTGGATAATCGCGATACTCCCAATTAGAGCCACGCGTATTACTGTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGttt < 6:16416/138‑1 (MQ=255) tgCTTTTGGATAATCGCGATAATCCCAATTAGAGCCACGCGTATTACTGTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCAt < 8:215971/138‑1 (MQ=255) tgCTTTTGGATAATCGCGATAATCCCAATTAGAGCCACGCGTATTACTGTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATc > 3:286403/1‑139 (MQ=255) ttGGATAATCGCGATAATCCCAATTAGAGCCACGCGTATTACTGTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTa > 7:232550/1‑138 (MQ=255) ttGGATAATCGCGATAATCCCAATTAGAGCCACGCGTATTACTGTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTa > 5:242122/1‑138 (MQ=255) ttGGATAATCGCGATAATCCCAATTAGAGCCACGCGTATTACTGTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTa > 4:49027/1‑138 (MQ=255) ggATAATCGCGATAATCCCAATTAGAGCCACGCGTATTACTGTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTacac > 3:258201/1‑139 (MQ=255) ggATAATCGCGATAATCCCAATTAGAGCCACGCGTATTACTGTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTaca < 7:116283/138‑1 (MQ=255) gATCATCTCGATAATACCAATTAGAGCCACGAGTATTACTGTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTacac < 7:331160/138‑1 (MQ=255) aTCGCGATAATCCCAATTAGAGCCACGCGTATTACTGTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCa < 4:258201/139‑1 (MQ=255) tAATCCCAATTAGAGCCACGCGTATTACTGTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCt < 1:141626/139‑1 (MQ=255) tAATCCCAATTAGAGCCACGCGTATTACTGTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCt < 7:326959/139‑1 (MQ=255) tAATCCCAATTAGAGCCACGCGTATTACTGTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCt < 4:286403/139‑1 (MQ=255) tAATCCCAATTAGAGCCACGCGGATTACTGTCACCAAATGCTACAACGTCTTCGTATCCCCTTACCTCTCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGAAGATAAAATGTTTCATCTTTACACCCCCAAAAGCCt < 8:374788/139‑1 (MQ=255) ccAATTAGAGCCACGCGTATTACTGTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACtt < 1:279879/139‑1 (MQ=255) cAATTAGAGCCACGCGTATTACTGTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACttt < 6:400130/139‑1 (MQ=255) aTTAGAGCCACGCGTATTACTGTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTacac > 5:85073/1‑119 (MQ=255) aTTAGAGCCACGCGTATTACTGTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTacac < 6:85073/119‑1 (MQ=255) aTTAGAGCCACGCGTATTACTGTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACTTTaa > 5:190421/1‑139 (MQ=255) aTTAGAGCCACGCGTATTACTGTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACTTTaa > 8:127165/1‑139 (MQ=255) aTTAGAGCCACGCGTATTACTGTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACTTTaa > 4:391342/1‑139 (MQ=255) agCCACGCGTATTACTGTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACTTTAATGTta < 3:918/139‑1 (MQ=255) gCCACGCGTATTACTGTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAACGCCTCACTTTAATGTta > 3:244201/1‑138 (MQ=255) aCGCGTATTACTGTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGaa < 3:325/81‑1 (MQ=255) aCGCGTATTACTGTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGaa > 4:325/1‑81 (MQ=255) cgcgTATTACTGTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTac < 1:257477/107‑1 (MQ=255) cgcgTATTACTGTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTac > 2:257477/1‑107 (MQ=255) cgcgTATTACTGTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACTTTAATGTTATAcc > 6:191304/1‑138 (MQ=255) cgcgTATTACTGTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACTTTAATGTTATACct > 8:169325/1‑139 (MQ=255) cgcgTATTACTGTCACCAAATGCTACAACGTCTTCGTATCACATTCCCTCGAATCCTGATGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACACCCAAAAGCCTCACTTTAATGTTATAcc > 7:250295/1‑138 (MQ=255) gTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCAt > 2:68372/1‑90 (MQ=255) gTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCAt < 1:68372/90‑1 (MQ=255) tCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACTTTAATGTTATACCTCTGTTTCTCTTc > 2:32687/1‑139 (MQ=255) aCCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGaa > 7:187499/1‑54 (MQ=255) aCCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGaa < 8:187499/54‑1 (MQ=255) aCCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTaca > 2:366480/1‑94 (MQ=255) aCCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTaca < 1:366480/94‑1 (MQ=255) aCCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACttt < 5:293591/113‑1 (MQ=255) aCCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACttt > 2:176806/1‑113 (MQ=255) aCCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACttt < 1:176806/113‑1 (MQ=255) aCCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACttt > 6:293591/1‑113 (MQ=255) aCCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACTTTAATGTTATACCTCTGTTTCTCTTCGt > 4:242510/1‑139 (MQ=255) cTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATCTTTCATCTTTACACCCCCAAAATCCTCACTTTAATGTTATACCTCTGTTTCTCTTCGTTCAATGaa > 2:238127/1‑139 (MQ=255) cTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAAAGAACAGCAGAAGGAAAATGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCAGTTTAATGTTATACCTCTGTTTCTCTTCGTTCAATGaa < 7:338380/139‑1 (MQ=255) cGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACTTTAATGTTATACCTCTGTTTCTCTTCGTTCAATGAAGAGttt < 6:364954/139‑1 (MQ=255) tCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACTTTAATGTTATACCTCTGTTTCTCTTCGTTCAATGAAGAGttttt < 3:242510/139‑1 (MQ=255) tCTTCGTATCCCCTTCCCTAGCATCCTGCTGTAACGAACAGGAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACTTTATTGTTATACCTCTGTTTCTCTTCGTTCAATGAAGAGttttt < 1:390350/139‑1 (MQ=255) ttCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCATCACTTTAATGTTATACCTCAGATTCTCTTCTTACAATGAAGAGTTTTTc > 2:390350/1‑138 (MQ=255) tCCCCTTCCCTCGCATCCTGCTGTAACGCTCAGCAGAAGAAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACTTTAATGTTATACCTCTGTTTCTCTTCGTTCAATGAAGAGTTTTTCGCTATCa < 2:14610/139‑1 (MQ=255) tCCCCTTCCCTCGCATCCTGCTGTAACGATCAGCAGAAGAAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACTTTAATGTTATACCTCTGTTTCTCTTCGTTCAATGAAGAGTTTTTCGCTATCa < 2:21118/139‑1 (MQ=255) tCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACTTTAATGTTATACCTCTGTTTCTCTTCGTTCAATGAAGAGTTTTTCGCTATCa > 2:290083/1‑139 (MQ=255) cccTTCCCTCGCATCCTGCTGTAACGCACACCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTAAACCCCCAAAAGCCTCACTTAAATGTTAAACATCTGTTTCTATTCTTTCAATGAATAGTTTTTCGCTATCaat > 4:277491/1‑137 (MQ=255) cccTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACTTTa < 4:9589/88‑1 (MQ=255) cccTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACTTTa > 3:9589/1‑88 (MQ=255) cccTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACTTTAATGTTATACCTCTGTTTCTCTTCGTTCAATGAAGAGTTTTTCGCTATCACTGtt < 7:127165/137‑1 (MQ=255) cccTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACTTTAATGTTATACCTCTGTTTCTCTTCGTTCAATGAAGAGTTTTTCGCTATCACTGtt < 1:32687/137‑1 (MQ=255) gCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACTTTAATGTTATACCTCTGTTTCTCTTCGTTCAATGAAGAGTTTTTCGCTATCACTGTTTTTTcc < 6:190421/138‑1 (MQ=255) gCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACTTTAATGTTATACCTCTGTTTCTCTTCGTTCAATGAAGAGTTTTTCGCTATCACTGTTTTTTcc < 7:126802/138‑1 (MQ=255) aTCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGcc < 5:115457/68‑1 (MQ=255) aTCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGcc > 6:115457/1‑68 (MQ=255) ctgTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACTTTAATGTTATACCTCTGTTTCTCTTCGTTCAATGAAGAGTTTTTCGCTATCACTGTTTTTTCCTATAGTTaa > 2:80540/1‑139 (MQ=255) tAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACTTTAATGTTATACCTCTGTTTCTCTTCGTTCAATGaa < 3:196557/100‑1 (MQ=255) tAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACTTTAATGTTATACCTCTGTTTCTCTTCGTTCAATGaa > 4:196557/1‑100 (MQ=255) aCGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACTTTAATGTTATACCTCTGTTTCTCTTCGTTCAATGAAGAGTTTTTCGCTATCACTGTTTTTTCCTATAGTTAACgtgt < 1:80540/139‑1 (MQ=255) cGAACAGCTGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCACAAAAGCCTCACTTTAATGTTATACCTCTGTTTCTCTTCGTTCAATGAAGAGTTTTTAGCTATCACTGTTTTTTCCTATAGTTAACGTGTc < 2:36996/139‑1 (MQ=255) aaCAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCt > 4:93693/1‑55 (MQ=255) aaCAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCt < 3:93693/55‑1 (MQ=255) aaCAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACTTTAATGTTATACCTCTGTTTCTCTTCGTTCAATGAAGAGTTTTTCGCTATCACTGTTTTTTCCTATAGTTAACGTGTccc > 1:293375/1‑139 (MQ=255) aaCAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACTTTAATGTTATACCTCTGTTTCTCTTCGTTCAATGAAGAGTTTTTCGCTATCACTGTTTTTTCCTATAGTTAACGTGTccc > 6:66319/1‑139 (MQ=255) | GCTCAGCTGTTTTTAATATATTGACCCACTGCTGTGCTTTTGGATAATCGCGATAATCCCAATTAGAGCCACGCGTATTACTGTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACTTTAATGTTATACCTCTGTTTCTCTTCGTTCAATGAAGAGTTTTTCGCTATCACTGTTTTTTCCTATAGTTAACGTGTCCC > CP006881/2466334‑2466609 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |