| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP006881 | 2,805,244 | T→C | 5.4% | E53G (GAA→GGA) | U712_14455 ← | 6‑phosphofructokinase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 2,805,244 | 0 | T | C | 5.4% | 396.7 / 9.2 | 130 | E53G (GAA→GGA) | U712_14455 | 6‑phosphofructokinase |
| Reads supporting (aligned to +/- strand): ref base T (67/55); new base C (3/4); total (71/59) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.02e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 131 total aligned reads displayed.
CAAGGCCTTCAATACCAAGCTTCTTCAAGTTTGCTATCCCTTTTTCACGGCCTTCAACTGTTTTGAATTCAGGACATCTCGCCGTATAAAGCTTAGTCCCTCCACGATGTATAATATCGCCTACTGATCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATCCGTTGTAAATACCGTAAACTTCAACGTCATGATAGATCGCTTTTCTGACTACTGCGCGAACTGCTGCGTTCATTCCCGGGGAATCCCCGCCGCTCGTT > CP006881/2805110‑2805381 | caaGTCCTTCAATACCAAGCTTCTTCAAGTTTGCTATCCCTTTTTCAAGGCCTTCAACTGTTTTGAATTCAGGACATCTCGCCGTATAAAGCTTAGTCCCTCCACGATGTATAATATCGCCTACTGATCCGAGTTCAAg < 5:327641/139‑1 (MQ=255) cTTCAATACCAAGCTTCTTCAAGTTTGCTATCCCTTTTTCACGGCCTTCAACTGTTTTGAATTCAGGACATCTCGCCGTATAAAGCTTAGTCCCTCCACGATGTATAATATCGCCTACTGATCCGAGTTCAAGCTTTTc < 8:392888/139‑1 (MQ=255) cAAGCTTCTTCAAGTTTGCTATCCCTTTTTCACGGCCTTGAACTGTTTTTAATTGAGGACATCTCGCCGGATAAAGCTTAGTCCCTCCACGATGTATTATATAGCCTACTGATCCGATTTCAAGATTTTCAATCtttac > 4:120454/1‑137 (MQ=255) aaGCTTCTTCAAGTTTGCTATCCCTTTTTCACGGCCTTCAACTGTTTTGAATTCAGGACATCTCGCCGTATAAAGCTTAGTCCCTCCACGATGTATAATATCGCCTACTGATCCGAGTCCAAGCTTTTCAATCTTTCCg < 3:105239/139‑1 (MQ=255) aGCTTCTTCAAGTTTGCTATCCCTTTTTCACGGCGTTCAACTGTTTTGAATTCAGGACATCTCGCCGTTTATAGCTTAGTCCCGCCACGATGTATATTATCGCCTACTGTTCCGAGTTCGCGCTTTTACAGCTTTCCGc > 6:17176/1‑139 (MQ=255) aGCTTCTTCAAGTTTGCTATCCCTTTTTCACGGCCTTCAACTGTTTTGAATTCAGGACATCTCGCCGTATAAAGCTTAGTCCCTCCACGATGTATAATATCGCCTACTGATCCGAGTTCAAGCTTTTCAATCTTTCCGc > 8:398471/1‑139 (MQ=255) aGCTTCTTCAAGTTTGCTATCCCTTTTTCACGGCCTTCAACTGTTTTGAATTCAGGACATCTCGCCGTATAAAGCTTAGTCCCTCCACGATGTATAATATCGCCTACTGATCCGAGTTCAAGCTTTTCAATCTTTCCGc > 2:102002/1‑139 (MQ=255) cttcAAGTTTGCTATCCCTTTTTCACGGCCTTCAACTGTTTTGAATTCAGGACATCTCGCCGTATAAAGCTTAGTCCCTCCACGATGTATAATATAGCCTACTGATCCGAGTTCAAGCTTTTCAATCTTTCCGCTGAt > 6:198123/1‑138 (MQ=255) cttcAAGTTTGCTATCCCTTTTTCACGGCCTTCAACGGTTTTGTTTTAAGGACATCACGCCGTAAAAAGCATATTACATAAACCAATTATAATATGGCCTACTGAACCGAGTTGAAGCTTTTCAATCTTTCCgatgat > 6:3442/1‑138 (MQ=255) gTTTGCTATCCCTTTTTCACGGCCTTCAACTGTTTTTAATTCAGGACATCTCGCCGTATAAATCTTAGTCCCTCCACGATGTAAAATATCGCCTACAGATCCGAGTTCAAGCTTTTCAATATTTCCGCTGATCAATccc > 3:9015/1‑139 (MQ=255) tCCCTTTTTCACGGCCTTCAACTGTTTTGAATTCAGGACATCTCGCCGTATAAAGCTTAGTCCCTCCACGATGTATAATATCGCCTACTGATCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTAt < 8:285795/137‑1 (MQ=255) tCCCTTTTTCACGGCCTTCAACTGTTTTGAATTCAGGACATCTCGCCGTATAAAGCTTAGTCCCTCCACGATGTATAATATCGCCTACTGATCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTAt < 7:4311/137‑1 (MQ=255) tCCCTTTTTCACGGCCTTCAACTGTTTTGAATTCAGGACATCTCGCCGTATAAAGCTTAGTCCCTCCACGATGTATAATATCGCCTACTGATCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTAt < 6:279728/137‑1 (MQ=255) tCCCTTTTTCACGGCCTTCAACTGTTTTGAATTCAGGACATCTCGCCGTATAAAGCTTAGTCCCTAGACGATGTATAATATCGCCTACTGATCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTAt < 5:3442/137‑1 (MQ=255) ttttCACGGCCTTCAACTGTTTTGAATTCAGGACATCTCGCCGTATAAAGCTTAGTCCCTCCACGATGTATAATATCGCCTACTGATCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATCCGTTGt > 5:89339/1‑139 (MQ=255) tttCACGGCCTTCAACTGTTTTGAATTCAGGACATCTCGCCGTATAAAGCTTAGTCCCTCCACGATGTATAATATCGCCTACTGATCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATCCGTTGt > 1:164858/1‑138 (MQ=255) tCACGGCCTTCAACTGTTTTGAATTCAGGACATCTCGCCGTATAAAGCTTAGTCCCTCCACGATGTATAATATCGCCTACTGATCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATCCGTTGTaa < 2:164858/138‑1 (MQ=255) ccTTCAACTGTTTTGAATTCAGGACATCTCGCCGTATAAAGCTTAGTCCCTCCACGATGTATAATATCGCCTACTGATCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATCCGTTGTAAATACCGt < 1:258820/139‑1 (MQ=255) cTGTTTTGAATTCAGGACATCTCGCCGTATAAAGCTTATTCCCTCCACGATGTATAATATCTCCTACTGATCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATCCGTTGTAAATACCGTAAACTTc < 3:225781/139‑1 (MQ=255) cTGTTTTGAATTCAGGACATCTCGCCGTATAAAGCTTAGTCCCTCCACGATGTATAATATCGCCTACTGATCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATCCGTTGTAAATACCGTAAACTTc < 1:102002/139‑1 (MQ=255) ttttGAATTCAGGACATCTCGCCGTATAAAGCTTAGTCCCTCCACGATGTATAATATCGCCTACTGATCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATCCGTTGTAAATACCGTAAACTTCAAc > 3:103469/1‑139 (MQ=255) ttttGAATTCAGGACATCTCGCCGTATAAAGCTTAGTCCCTCCACGATGTATAATATCGCCTACTGATCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATCCGTTGTAAATACCGTAAACTTCAAc > 5:274102/1‑139 (MQ=255) ttttGAATACAGGACATCTCGCCGTATAAAGCTTAGTCCCTCCACGATCTATAATATCGCCTACTGATCCGAGTACAAGCTTTTCACTCTTTCCGCTGATCAATCCCGCGTCTCCGAAGTAAATACCGTAAACTTCAAc > 8:382100/1‑139 (MQ=255) ttGAATTCAGGACATCTCGCCGTATAAAGCTTAGTCCCTCCACGATGTATAATATCGCCTACTGATCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATCCGTTGTAAATACCGTAAACTTCAACGt > 3:194734/1‑139 (MQ=255) aGGACATCTCGCCGTATAAAGCTTAGTCCCTCCACGATGTATAATATCGCCTACTGATCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATCCGTTGTAAATACCGTAAACTTCAACGTCATGa > 3:53833/1‑136 (MQ=255) cATCTCGCCGTATAAAGCGTAGTCCCTCCACGATGTATAATATCGCCTACTGATCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATCCGTTGTAAATACCGTAAACTTCAACGTCATGATAGATCg < 4:266166/139‑1 (MQ=255) gCCGTATAAAGCTTAGTCCCTCCACGATGTATAATATCGCCTACTGATCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATCCGTTGTAAATACCGTAAACTTCAACGTCATGATAGATCGCt < 2:320699/135‑1 (MQ=255) gCCGTATAAAGCTTAGTCCCTCCACGATGTATAATATCGCCTACTGATCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATCCGTTGTAAATACCGTAAACTTCAACGTCATGATAGATCGCt < 4:53833/135‑1 (MQ=255) aGTCCCTCCACGATGTATAATATCGCCTACTGATCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATCCGTTGTAAATACCGTAAACTTc < 3:238536/102‑1 (MQ=255) aGTCCCTCCACGATGTATAATATCGCCTACTGATCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATCCGTTGTAAATACCGTAAACTTc > 4:238536/1‑102 (MQ=255) aGTCCCTCCACGATGTATAATATCGCCTACTGATCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATCCGTTGTAAATACCGTAAACTTCaa > 3:50765/1‑104 (MQ=255) aGTCCCTCCACGATGTATAATATCGCCTACTGATCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATCCGTTGTAAATACCGTAAACTTCaa < 4:50765/104‑1 (MQ=255) aGTCCCTCCACGATGTATAATATCGCCTACTGATCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATCCGTTGTAAATACCGTAAACTTCACCGTCATGATAGATCGCTTTTCTGACTACTGcgcg > 7:18272/1‑138 (MQ=255) aGTCCCTCCACGATGTATAATATCGCCTACTGATCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATCCGTTGTAAATACCGTAAACTTCAACGTCATGATAGATCGCt > 8:49628/1‑121 (MQ=255) aGTCCCTCCACGATGTATAATATCGCCTACTGATCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATCCGTTGTAAATACCGTAAACTTCAACGTCATGATAGATCGCt < 7:49628/121‑1 (MQ=255) aGTCCCTCCACGATGTATAATATCGCCTACTGATCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATCCGTTGTAAATACCGTAAACTTCAACGTCATGATAGATCGCTTTTCTGACTACTgc > 5:361861/1‑135 (MQ=255) aGTCCCTCCACGATGTATAATATCGCCTACTGATCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATCCGTTGTAAATACCGTAAACTTCAACGTCATGATAGATCGCTTTTCTGACTACTgc < 6:361861/135‑1 (MQ=255) aGTCCCTCCACGATGTATAATATCGCCTACTGATCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATCCGTTGTAAATACCGTAAACTTCAACGTCATGATAGATCGCTTTTCTGACTACTGcgcg > 8:3350/1‑138 (MQ=255) aGTCCCTCCACGATGTATAATATCGCCTACTGATCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATCCGTTGTAAATACCGTAAACTTCAACGTCATGATAGATCGCTTTTCTGACTACTGcgcg > 6:89945/1‑138 (MQ=255) aGTCCCTCCACGATGTATAATATCGCCTACTGATCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATCCGTTGTAAATACCGTAAACTTCAACGTCATGATAGATCGCTTTTCTGACTACTGcgcg > 8:57733/1‑138 (MQ=255) aGTCCCTCCACGATGTATAATATCGCCTACTGATCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATCCGTTGTAAATACCGTAAACTTCAACGTCATGATAGATCGCTTTTCTGACTACTGcgcg > 2:158632/1‑138 (MQ=255) aGTCCCTCCACGATGTATAATATCGCCTACTGATCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATCCGTTGTAAATACCGTAAACTTCAACGTCATGATAGATCGCTTTTCTGACTACTGcgcg > 1:254905/1‑138 (MQ=255) aGTCCCTCCACGATGTATAATATCGCCTACTGATCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATCCGTTGTAAATACCGTAAACTTCAACGACATGATAGATCGCTTTTCTGACTACTGcgcg > 4:335749/1‑138 (MQ=255) aGTCCCTCCACGATGTATAATATCGCCTACTGATCCGAGTTCAAGCTTTTCAATCATTCCGCTGATCAAACCAGCGTATCCGTTGTAAATACCGTAAACTTCAACGTCATGATAGATCGCTTTTCTGACTACTGcgcg > 3:124389/1‑138 (MQ=255) tCCCTCCACGATGTATAATATCGCCTACTGATCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATCCGTTGTAAATACCGTAAACTTCAACGTCATGATAGATCGCTTTTCTGACTACTGCGCGAAc < 3:78885/139‑1 (MQ=255) cTCCACGATGTATAATATCGCCTACTGATCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATcc < 7:190351/76‑1 (MQ=255) cTCCACGATGTATAATATCGCCTACTGATCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATcc > 8:190351/1‑76 (MQ=255) tCCACGATGTATAATATCGCCTACTGATCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATCCGTTGTAAATACCGTAAACTTCAACGTCATGATAGATCGCTTTTCTGACTACTGCGCGAActgct > 2:142616/1‑139 (MQ=255) ccACGATGTATAATATCGCCTACTGATCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATCCGTTGTAAATACCGt < 1:358340/88‑1 (MQ=255) ccACGATGTATAATATCGCCTACTGATCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATCCGTTGTAAATACCGt > 2:358340/1‑88 (MQ=255) ccACGATGTATAATATCGCCTACTGATCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATCCGTTGTAAATACCGTAAACTTCAACGTCATGATAGATCGCTTTTCTGACTACTGCGCGAActgctg > 1:406437/1‑139 (MQ=255) cACGATGTATAATATCGCCTACTGATCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATCCGTTGTAAATACCGTAAACTTCAACGTCATGATAGATCGCTTTTCTGACTACTGCGCGAActgct < 3:161351/137‑1 (MQ=255) gATGTATAATATCGCCTACTGATCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGt > 6:362141/1‑66 (MQ=255) gATGTATAATATCGCCTACTGATCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGt < 5:362141/66‑1 (MQ=255) aTGTATAATATCGCCTACTGATCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCcgcg < 6:94426/64‑1 (MQ=255) aTGTATAATATCGCCTACTGATCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCcgcg > 5:94426/1‑64 (MQ=255) ataataTCGCCTACTGATCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATCCGTTGTAAATACCGTAAACTTCAACGTCATGATAGATCGCTTTTCTGACTACTGCGCGAACTGCTGCGTTCATTc > 3:271581/1‑139 (MQ=255) cGCCTACTGATCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCcg < 4:35352/51‑1 (MQ=255) cGCCTACTGATCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATcc > 2:281749/1‑58 (MQ=255) cGCCTACTGATCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATCCGTTGTAAATACCGTAAAc < 7:263452/76‑1 (MQ=255) cGCCTACTGATCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATCCGTTGTAAATACCGTAAACTTCAACGTCATGATAGATCTCTTTTCTGACTACTCCGCGAACTGCTGCGTTCATTCCCgggg > 5:226458/1‑138 (MQ=255) cGCCTACTGATCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATCCGTTGTAAATACCGTAAACTTCAACGTCATGATAGATCGCt < 5:283304/98‑1 (MQ=255) cGCCTACTGATCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATCCGTTGTAAATACCGTAAACTTCAACGTCATGATAGATCGCTTTTCt < 7:339770/103‑1 (MQ=255) cGCCTACTGATCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATCCGTTGTAAATACCGTAAACTTCAACGTCATGATAGATCGCTTTTCTGACTACTGCGCGAACTGCTGCGTTCATTCCCgggg > 6:126378/1‑138 (MQ=255) cGCCTACTGATCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATCCGTTGTAAATACCGTAAACTTCAACGTCATGATAGATCGCTTTTCTGACTACTGCGCGAACTGCTGCGTTCATTCCCgggg > 5:16950/1‑138 (MQ=255) cGCCTACTGATCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATCCGTTGTAAATACCGTAAACTTCAACGTCATGATAGATCGCTTTTCTGACTACTGCGCGAACTGCTGCGTTCATTCCCgggg > 6:209296/1‑138 (MQ=255) cGCCTACTGATCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATCCGTTGTAAATACCGTAAACTTCAACGTCATGATAGATCGCTTTTCTGACTACTGCGCGAACTGCTGCGTTCATTCCCgggg > 3:329808/1‑138 (MQ=255) cGCCTACTGATCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATCCGTTGTAAATACCGTAAACTTCAACGTCATGATAGATCGCTTTTCTGACTACTGCGCGAACTGCTGCGTTCATTCCCgggg > 2:181834/1‑138 (MQ=255) cGCCTACTGATCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAAACCCGCGTATCCGTTGTAAATACCGTAAACTTCAACGTCATGATAGATCGCt > 5:190479/1‑98 (MQ=255) ccTACTGATCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATCCGTTGTAAATACCGTAAACTTc < 2:405481/77‑1 (MQ=255) ccTACTGATCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATCCGTTGTAAATACCGTAAACTTc > 1:405481/1‑77 (MQ=255) ccTACTGATCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATCCGTTGTAAATACCGTAAACTTCAACGTCATGATAGATCGCt < 6:58120/96‑1 (MQ=255) ccTACTGATCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATCCGTTGTAAATACCGTAAACTTCAACGTCATGATAGATCGCt > 7:77851/1‑96 (MQ=255) ccTACTGATCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATCCGTTGTAAATACCGTAAACTTCAACGTCATGATAGATCGCTTTTCTGCCTACTGCGCGAACTGCTGCGTTCATTCCCGGGGAAt > 4:177455/1‑139 (MQ=255) ccTACTGATCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATCCGTTGTAAATACCGTAAACTTCAACGTCATGATAGATCGCTTTTCTGACTACTgc > 3:368090/1‑110 (MQ=255) ccTACTGATCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATCCGTTGTAAATACCGTAAACTTCAACGTCATGATAGATCGCTTTTCTGACTACTGcgcg < 2:245402/113‑1 (MQ=255) ccTACTGATCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATCCGTTGTAAATACCGTAAACTTCAACGTCATGATAGATCGCTTTTCTGACTACTGCGCGaa < 6:327739/115‑1 (MQ=255) ccTACTGATCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATCCGTTGTAAATACCGTAAACTTCAACGTCATGATAGATCGCTTTTCTGACTACTGCGCGAACTGCTGCGTTCATTCCCGGGGAAt > 3:512/1‑139 (MQ=255) ccTACTGATCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATCCGTTGTAAATACCGTAAACTTCAACGTCATGATAGATCGCTTTTCTGACTACTGCGCGAACTGCTGCGTTCATTCCCGGGGAAt > 2:323672/1‑139 (MQ=255) ccTACTGATCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATCCGTTGTAAATACCGTAAACTTCAACGTCATGATAGATCGCTTTTCTGACTACTGCGCGAACTGCTGCGTTCATTCCCGGGGAAt > 3:388616/1‑139 (MQ=255) ccTACTGATCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATCCGTTGTAAATACCGTAAACTTCAACGTCATGATAGATCGCTTTTCTGACTACTGCGCGAACTGCTGCGTTCATTCCCGGGGAAt > 3:365265/1‑139 (MQ=255) ccTACTGATCCGAGTCCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATCCGTTGTAAATACCGTAAACTTCAACGTCATGATAGATCGCt < 3:337908/96‑1 (MQ=255) ccTACTGATCCGAGTCCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATCCGTTGTAAATACCGTAAACTTCAACGTCATGATAGATCGCt > 4:337908/1‑96 (MQ=255) aTCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATCCGTTGTAAATACCGTAAACTTCAACGTCATGATAGATCg > 7:205701/1‑87 (MQ=255) aTCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATCCGTTGTAAATACCGTAAACTTCAACGTCATGATAGATCg < 8:205701/87‑1 (MQ=255) aTCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATCCGTTGTAAATACCGTAAACTTCAACGTCATGATAGATCGCTTTTCTGACTACTGCGCGAACTGCTGCGTTCATTCCCGGGGAATCCccgc < 8:227949/138‑1 (MQ=255) aTCCGAGTCCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATCCGTTGTAAATACCGTAAACTTCAACGTCATGATAGATCGCTTTTCTGACTACTGCGCGAACTGCTGCGTTCATTCCCGGGGAATCCccgcc > 8:330028/1‑139 (MQ=255) tCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATCCGTTGTAAATACCGTAAACTTGAACGTCATGATAGATCGCTTTTCTGACTACTGCGCGAACTGCTGCGTTCATTCGCGGGGAATCCccgccg < 7:382100/139‑1 (MQ=255) tCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATCCGTTGTAAATACCGTAAACTTCAACGTCATGATAGATCGCTTTTCTGACTACTGCGCGAACTGCTGCGTTCATTCCCGGGGAATCCccgccg < 1:142616/139‑1 (MQ=255) tCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATCCGTTGTAAATACCGTAAACTTCAACGTCATGATAGATCGCTTTTCTGACTACTGCGCGAACTGCTGCGTTCATTCCCGGGGAATCCccgccg < 1:261640/139‑1 (MQ=255) tCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATCCGTTGTAAATACCGTAAACTTCAACGTCATGATAGATCGCTTTTCTGACTACTGCGCGAACTGCTGCGTTCATTCCCGGGGAATCCccgccg < 1:68573/139‑1 (MQ=255) tCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATCCGTTGTAAATACCGTAAACTTCAACGTCATGATAGATCGCTTTTCTGACTACTGCGCGAACTGCTGCGTTCATTCCCGGGGAATCCccgccg < 4:405896/139‑1 (MQ=255) ccGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATCCGTTGTAAATACCGTAAACTTCAACGTCATGATAGATCGCTTTTCTGACTACTGCGCGAACTGCTGCGTTCATTCCCGGGGAATCCCcgccgc > 2:358085/1‑139 (MQ=255) cGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATCCGTTGTAAATACCGTAAACTTCAACGTCATGATAGATCGCTTTTCTGACTACTGCGCGAACTGCTGCGTTCATTCCCGGGGAATCCCCGCCGCt < 4:267649/139‑1 (MQ=255) cGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATCCGTTGTAAATACCGTAAACTTCAACGTCATGATAGATCGCTTTTCTGACTACTGCGCGAACTGCTGCGTTCATTCCCGGGGAATCCCCGCCGCt < 1:181834/139‑1 (MQ=255) cGAGTCCAAGCTTTTCACTCTTTCCGCTGATCAATCCCGCGTATCCGGTGTAAATACCGTAAACTTCAACGTCATGATAGATCGCTTTTCTGACTACTGCGCGAACTGCTGCGTTCATTCCCGGGGAATCCCCGCCGCt < 8:206133/139‑1 (MQ=255) cGAGTCCAAGCTTTTCAATCTTTCAGATTATCAATCCCCCGTATCCGTTGTAAATACCGTAAACTTCAACGTCATGATAGATCGCTTTTCTGACTACTGCGCGAACTGCTGCGTTCATTCCCGGGGAATCCCCGCCGCt < 8:357649/139‑1 (MQ=255) aGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATCCGTTGTAAATACCGTAAACTTCAACGTCATGATAGa > 5:188576/1‑79 (MQ=255) aGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATCCGTTGTAAATACCGTAAACTTCAACGTCATGATAGa < 6:188576/79‑1 (MQ=255) ttCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATCCGTTGTAAATACCGTAAACTTCAACGTCATGATAGATCGCTTTTCTGACTACTGCGCGAACTGCTGCGTTCATTCCCGGGGAATCCCCGCCGCTCGtt < 6:16950/139‑1 (MQ=255) | CAAGGCCTTCAATACCAAGCTTCTTCAAGTTTGCTATCCCTTTTTCACGGCCTTCAACTGTTTTGAATTCAGGACATCTCGCCGTATAAAGCTTAGTCCCTCCACGATGTATAATATCGCCTACTGATCCGAGTTCAAGCTTTTCAATCTTTCCGCTGATCAATCCCGCGTATCCGTTGTAAATACCGTAAACTTCAACGTCATGATAGATCGCTTTTCTGACTACTGCGCGAACTGCTGCGTTCATTCCCGGGGAATCCCCGCCGCTCGTT > CP006881/2805110‑2805381 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |