Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP006881 3,638,862 A→T 6.2% L131I (TTA→ATA)  U712_18760 ← putative ABC transporter ATP‑binding protein YwjA

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0068813,638,8620AT 6.2% 199.8 / 3.4 65L131I (TTA→ATA) U712_18760putative ABC transporter ATP‑binding protein YwjA
Reads supporting (aligned to +/- strand):  ref base A (31/30);  new base T (2/2);  total (33/32)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.17e-01

GCCGGATGCCGCCGATGTTATTTTCTACACGCGCGCTGAAGTCTCCGATATCCTTGTTCAGCGTGGTAAATGCTTTGGTCATTTTTTTGTTGAAATAAAGCGCTAGCCAAATGACGATCGGCATAATGATAAACGTTAATAAAGCAAGCTGCCAGTTAATAAACAGCATCACTCCGAACGCCCCGAGAATGGTCATGACCGCAATGAATAAGTCTTCCGGTCCGTGATGGGCGACTTCACCGATATACATTAAATCGTTCGTGAGCTTCGACAT  >  CP006881/3638724‑3638997
                                                                                                                                          |                                                                                                                                       
gCCGGATGCCGCCGATGTTATTTTCTACACGCGCGCTGAAGTCTCCGCTATCCTTGTTCAGCGTGGTAAATGCTTTGGTCAGTTTTTTGTTGAAATAAAGCGCTAGGCAAATGACGATCGGCATAATGATAAACGTtaa                                                                                                                                         >  5:282516/1‑139 (MQ=255)
gCCGGATGCCGCCGATGTTATTTTCTACACGCGCGCTGAAGTCTCCGATATCCTTGTTCAGCGTGGTAAATGCTTTGGTCATTTTTTTGTTGAAATAAAGCGCTAGCCAAATTACGATCGGCATAATGATAAACGTtaa                                                                                                                                         >  7:299261/1‑139 (MQ=255)
gCCGGATGCCGCCGATGTTATTTTCTACACGCGCGCTGAAGTCTCCGATATCCTTGTTCAGCGTGGTAAATGCTTTGGTCATTTTTTTGTTGAAATAAAGCGCTAGCCAAATGACGATCGGCATAATGATAAACGTtaa                                                                                                                                         >  4:72579/1‑139 (MQ=255)
  cGGATGCCGCCGATGTTATTTTCTACACGCGCGCTGAAGTCTCCGATATCCTTGTTCAGCGGGGTAAATGCTTTGGTCATTTTTTTGTTGAAATAAAGCGCTAGCCAAATGACGATCGGCATAATGATAAACGTtaat                                                                                                                                        >  6:365529/1‑138 (MQ=255)
     aTGCCGCCGATGTTATTTTCTACACGCGCGCTGAAGTCTCCGATATCCTTGTTCAGCGTGGTAAATGCTTTGGTCATTTTTTTGTTTTAATAAAGCGCTATGCAAATGACGATCGGCAAAATGATAAACGTTAATAaag                                                                                                                                    >  1:384245/1‑139 (MQ=255)
      tGCCGCCGATGTTATTTTCTACACGCGCGCTGAAGTCTCCGATATCCTTGTTCAGCGTGGTAAATGCTTTGGTCATTTTTTTGTTGAAATAAAGCGCTAGCCAAATGACGATCGGCATAATGATAAACGTTAATAaagc                                                                                                                                   <  8:2856/139‑1 (MQ=255)
          gccgATGTTATTTTCTACACGCGCGCTGAAGTCTCCGATATCCTTGTTCAGCGTGGTAAATGCTTTGGTCATTTTTTTGTTGAAATAAAGCGCTAGCCAAATGACGATCGGCATAATGATAAACGTTAATAaagcaagc                                                                                                                               >  7:94438/1‑139 (MQ=255)
           ccgATGTTATGTTCTACACGCGCGCTGAAGTCTCCGATATCCTTGTTCAGCGTGGTCAAAGCTTTGGTCATTTTTTTGTTGAAATAAAGCGCTAGCCAAATGACGATCGGCATAATGATAAACGTTAATAAGCAAGCTg                                                                                                                             <  4:7542/139‑1 (MQ=255)
                       tCTACACGCGCGCTGAAGTCTCCGATATCCTTGTTCAGCGTGGTAAATGCTTTGGTCATTTTTTTGTTGAAATAAAGCGCTAGCCAAATGACGATCGGCATAATGATAAACGTTAATAAAGCAAGCTGCCAGTtaata                                                                                                                   <  8:69151/138‑1 (MQ=255)
                           cacGCGCGCTGAAGTCTCCGATATCCTTGTTCAGCGTGGTAAATGCTTTGGTCATTTTTTTGTTGAAATAAAGCGCTAGCCAAATGACGATCGGCATAATGATAAACGTTAATAAAGCAAGCTGcc                                                                                                                           >  1:81681/1‑126 (MQ=255)
                           cacGCGCGCTGAAGTCTCCGATATCCTTGTTCAGCGTGGTAAATGCTTTGGTCATTTTTTTGTTGAAATAAAGCGCTAGCCAAATGACGATCGGCATAATGATAAACGTTAATAAAGCAAGCTGcc                                                                                                                           <  2:81681/126‑1 (MQ=255)
                           cacGCGCGCTGAAGTCTCCGATATCCTTGTTCAGCGTGGTAAATGCTTTGGTCATTTTTTTGTTGAAATAAAGCGCTAGCCAAATGACGATCGGCATAATGATAAACGTTAATAAAGCAAGCTGCCAGTTAATaaa                                                                                                                 <  1:177641/136‑1 (MQ=255)
                           cacGCGCGCTGAAGTCTCCGATATCCTTGTTCAGCGTGGTAAATGCTTTGGTCATTTTTTTGTTGAAATAAAGCGCTAGCCAAATGACGATCGGCATAATGATAAACGTTAATAAAGCAAGCTGCCAGTTAATaaa                                                                                                                 <  5:95543/136‑1 (MQ=255)
                             cgcgcgCTGAAGTCTCCGATATCCTTGTTCAGCGTGGTAAATGCTTTGGTCATTTTTTTGTTGAAATAAAGCGCTAGCCAAATGACGATCGGCATAATGATAAACGTTAATAAAGCAAGCTGCCAGTTAATAAACAGCa                                                                                                            <  8:94438/139‑1 (MQ=255)
                             cgcgcgCTGAAGTCTCCGATATCCTTGTTCAGCGTGGTAAATGCTTTGGTCATTTTTTTGTTGAAATAAAGCGCTAGCCAAATGACGATCGGCATAATGATAAACGTTAATAAAGCAAGCTGCCAGTTAATAAACAGCa                                                                                                            <  1:137792/139‑1 (MQ=255)
                              gcgcgcTGAAGTCTCCGATATCCTTGTTCAGCGTGGTAAATGCTTTGGTCATTTTTTTGTTGAAATAAAGCGCTAGCCAAATGACGATCGGCATAATGATAAACGTTAATAAAGCAAGCTGCCAGTTAATAAACAGCAt                                                                                                           <  1:169333/139‑1 (MQ=255)
                                       aGTCTCCGATATCCTTGTTCAGCGTGGTAAATGCTTTGGTCATTTTTTTGTTGAAATAAAGCGCTAGCCAAATGACGATCGGCATAATGATAAACGTTAATAAAGCAAGCTGCCAGTTAATAAACAGCATCACTCCGaa                                                                                                  <  7:260265/139‑1 (MQ=255)
                                           tcCGATATCCTTGTTCAGCGTGGTAAATGCTTTGGTCATTTTTTTGTTGAAATAAAGCGCTAGCCAAATGACGATCGGCATAATGATAAACGTTAATAAAGCAAGCTGcc                                                                                                                           >  2:121827/1‑110 (MQ=255)
                                           tcCGATATCCTTGTTCAGCGTGGTAAATGCTTTGGTCATTTTTTTGTTGAAATAAAGCGCTAGCCAAATGACGATCGGCATAATGATAAACGTTAATAAAGCAAGCTGcc                                                                                                                           <  1:121827/110‑1 (MQ=255)
                                                tatCCTTGTTCAGCGTGGTAAATGCTTTGGTCCTTTTTTTGTTGAAATAAATCGCTAGCCAAATTACGAACGGCATAATGATAAACTTTAATAAAGCAAGATGCCATTTAATAAACAGCATCACTCCGACCCCCCCgag                                                                                         >  4:25663/1‑139 (MQ=255)
                                                 atCCTTGTTCAGCGTGGTAAATGCTTTGGTCATTTTTTTGTTGAAATAAAGCGCTAGCCAAATGACGATCGGCATAATGATAAACGTTAATAAAGCAAGCTGCCAGTTAATAAACAGCATCACTCCGAACGCCCCgaga                                                                                        <  2:243846/139‑1 (MQ=255)
                                                     ttGTTCAGCGTGGTAAATGCTTTGGTCATTTTTTTGTTGAAATAAAGCGCTAGCCAAATGACGATCGGCATAATGATAAACGTTAATAAAGCAAGCTGCCAGTTAATAAACAGCATCACTCCGAACGCCCCGAGAATgg                                                                                    >  2:223025/1‑139 (MQ=255)
                                                        ttCAGCGTGGTAAATGCTTTGGTCATTTTTTTGTTGAAATAAAGCGCTAGCCAAATGACGATCGGCATAATGATAAACGTTAATAAAGCAAGCTGCCAGTTAATAAACAGCATCACTCCGAACGCCCCGAGAATGGTCa                                                                                 >  8:172408/1‑139 (MQ=255)
                                                          cAGCGTGGTAAATGCTTTGGTCATTTTTTTGTTGAAATAAAGCGCTAGCCAAATGACGATCGGCATAATGATAAACGTTAATAAAGCAAGCTGCCAGTTAATAAACAGCATCACTCCGAACGCCCCGAGAATGGTCAt                                                                                >  7:80350/1‑138 (MQ=255)
                                                           aGCGTGGTAAATGCTTTGGTCATTTTTTTGTTGAAATAAAGCGCTAGCCAAATGACGATCGGCATAATGATAAACGTTAATAAAGCAAGCTGCCAGTTAATAAACAGCATCACTCCGAACGCCCCGAGAATGGTCATGa                                                                              <  8:80350/139‑1 (MQ=255)
                                                            gCGTGGTAAATGCTTTGGTCATTTTTTTGTTGAAATAAAGCGCTAGCCAAATGACGATCGGCATAATGATAAACGTTAATAAAGCAAGCTGCCAGTTAATAAACAGCATCACTCCGAACGCCCCGAGAATGGTCATGAc                                                                             <  3:72579/139‑1 (MQ=255)
                                                             cGTGGTAAATGCTTTGGTCATTTTTTTGTTGAAATAAAGCGCTAGCCAAATGACGATCGGCATAATGATAAACGTTAATAAAGCAAGCTGCCAGTTAATAAACAGCATCACTCCGAACGCCCCGAGAATGGTCATGccc                                                                            >  8:96426/1‑139 (MQ=255)
                                                             cGTGGTAAATGCTTTGGTCATTTTTTTGTTGAAATAAAGCGCTAGCCAAATGACGATCGGCATAATGATAAACGTTAATAAAGCAAGCTGCCAGTTAATAAACAGCATCACTCCGAACGCCCCGAGAATGGTCATGccc                                                                            >  4:14582/1‑139 (MQ=255)
                                                             cGTGGTAAATGCTTTGGTCATTTTTTTGTTGAAATAAAGCGCTAGCCAAATGACGATCGGCATAATGATAAACGTTAATAAAGCAAGCTGCCAGTTAATAAACAGCATCACTCCGAACGCCCCGAGAATGGTCATGAcc                                                                            >  7:284611/1‑139 (MQ=255)
                                                             cGTGGTAAATGCTTTGGTCATTTTTTTGTTGAAATAAAGCGCTAGCCAAATGACGATCGGCATAATGATAAACGTTAATAAAGCAAGCTGCCAGTTAATAAACAGCATCACTCCGAACGCCCCGAGAATGGTCATGAcc                                                                            >  4:79431/1‑139 (MQ=255)
                                                                ggTAAATGCTTTGTTCATTTTTTTGTTGAAAAAAAGCGCTAGCCAAATCACTATCGGCATAATGATAAACGTTAATAAAGCACGCGGCCAGTTAATAAACCGCATCACTCCGAACGCCCCGAGAATGGTCATGACCGCa                                                                         <  2:391392/139‑1 (MQ=255)
                                                                ggTAAATGCTTTGGTCATTTTTTTGTTGAAATAAAGCGCTAGCCAAATGACGATCGGCATAATGATAAACGTTAATAAAGCAAGCTGCCAGTTAATAAACAGCATCACTCCGAACGCCCCGAGAATGGTCATGACCGCa                                                                         <  5:365529/139‑1 (MQ=255)
                                                                ggTAAATGCTTTGGTCATTTTTTTGTTGAAATAAAGCGCTAGCCAAATGACGATCGGCATAATGATAAACGTTAATAAAGCAAGCTGCCAGTTAATAAACAGCATCACTCCGAACGCCCCGAGAATGGTCATGACCGCa                                                                         <  2:384245/139‑1 (MQ=255)
                                                                ggTAAATGCTTTGGTAATTTTTTTGTTTAAATAAAGCGCTAGACAAATGACGATCGGAATAATGATAAACGTTAATAAAGCAAGCTGCCAGTTAATAAACAGCATCACTCCGAACGCCCCGAGAATGGTCATGACCGCa                                                                         <  3:25663/139‑1 (MQ=255)
                                                                 gTAAATGCTTTGGTCATTTTTTTGTTGAAATAAAGCGCTAGCCAAATGACGATCGGCATAATGATAAACGTTAATAAAGCAAGCTGCCAGTTAATAAACAGCATCACTCCGAACGCCCCGAGAATGGTCATGACCGCa                                                                         <  1:223025/138‑1 (MQ=255)
                                                                 gTAAATGCGTTGGTCATTTTTTTGTTGAAATAAAGCTCTAGCCAAATGACGATCGGCATAATGATAAACGTTAATAAAGCAAGCTGCCAGTTAATAAACAGCATCACTCCGAACGCCCCGAGAATGGTCATGACCGCa                                                                         <  8:262824/138‑1 (MQ=255)
                                                                          ttGGTCATTTTTTTGTTGAAATAAAGCGCTAGCCAAATGACGATCGGCATAATGATAAACGTTAATAAAGCAAGCTGCCAGTTAATAAACAGCATCACTCCGAACGCCCCGAGAATGGTCATGACCGCAATGAATAAGt                                                               >  8:168732/1‑139 (MQ=255)
                                                                           tGGTGATTTTTTTGTTGAAATAAAGCGCTAGCCAAATGACGATCGGCATAATGATAAACGTTAATAAAGCAAGCTGCCAGTTAATAAACAGCAACACTCCGAACGCCCCGAGAATGGTCATGACCGCAATGAATAAGTc                                                              >  1:391392/1‑139 (MQ=255)
                                                                           tGGTCATTTTTTTGTTGAAATAAAGCGCTAGCCAAATGACGATCTGCATAATGATAAACGTTAATAAAGCAAGCTGCCAGTTAAAAAACAGCATAAATCCGAACGCCCCGAGAATGGTCATGACCGCAATGAATAAGTc                                                              >  8:52276/1‑139 (MQ=255)
                                                                           tGGTCATTTTTTTGTTGAAATAAAGCGCTAGCCAAATGACGATCGGCATAATGATAAACGTTATTAAAGCAAGCTGCCAGTTAATAAACAGCATCACTCCGAACGCCCCGAGAATGGTCATGACCGCAATGAATAAGTc                                                              >  3:185539/1‑139 (MQ=255)
                                                                           tGGTCATTTTTTTGTTGAAATAAAGCGCTAGCCAAATGACGATCGGCATAATGATAAACGTTATTAAAGCAAGCTGCCAGTTAATAAACAGCATCACTCCGAACGCCCCGAGAATGGTCATGACCGCAATGAATAAGTc                                                              >  3:192350/1‑139 (MQ=255)
                                                                           tGGTCATTTTTTTGTTGAAATAAAGCGCTAGCCAAATGACGATCGGCATAATGATAAACGTTAATAAAGCAAGCTGCCAGTTAATAAACAGCATCACTCCGaa                                                                                                  >  2:76775/1‑103 (MQ=255)
                                                                           tGGTCATTTTTTTGTTGAAATAAAGCGCTAGCCAAATGACGATCGGCATAATGATAAACGTTAATAAAGCAAGCTGCCAGTTAATAAACAGCATCACTCCGaa                                                                                                  <  1:76775/103‑1 (MQ=255)
                                                                           tGGTCATTTTTTTGTTGAAATAAAGCGCTAGCCAAATGACGATCGGCATAATGATAAACGTTAATAAAGCAAGCTGCCAGTTAATAAACAGCATCACTCCGAACGCCCCGAGAATGGTCATGACCGCAATGAATAAGTc                                                              >  2:372212/1‑139 (MQ=255)
                                                                           tGGTCATTTTTTTGTTGAAATAAAGCGCTAGCCAAATGACGATCGGCATAATGATAAACGTTAATAAAGCAAGCTGCCAGTTAATAAACAGCATCACTCCGAACGCCCCGAGAATGGTCATGACCGCAATGAATAAGTc                                                              >  3:296273/1‑139 (MQ=255)
                                                                           tGGTCATTTTTTTGTTGAAATAAAGCGCTAGCCAAATGACGATCGGCATAATGATAAACGTTAATAAAGCAAGCTGCCAGTTAATAAACAGCATCACTCCGAACGCCCCGAGAATGGTCATGACCGCAATGAATAAGTc                                                              >  7:289869/1‑139 (MQ=255)
                                                                            ggTCATTTTTTTGTTGAAATAAAGCGCTAGCCAAATGACGATCGGCATAATGATAAACGTTAATAAAGCAAGCTGCCAGTTAATAACCAGCATCACTCCGAACGCCCCGAGAATGGTCATGACCGCAATGAATAAGACt                                                             >  1:366168/1‑139 (MQ=255)
                                                                                 tttttttGTTGAAATAAAGCGCTAGCCAAATGACGATCGGCATAATGATAAACGTTAATAAAGCAAGCTGCCAGTTAATAAACAGCATCACTCCGAACGCCCCGAGAATGGTCATGACCGCAATGAATAAGTCTTCCgg                                                        >  2:131609/1‑139 (MQ=255)
                                                                                      ttgttgAAATAAAGCGCTAGCCAAATGACGATCGGCATAATGATAAACGTTAATAAAGCAAGCTGCCAGTTAATAAACAGCATCACTCCGAACGCCCCGAGAATGGTCATGACCGCAATGAATAAGTCTTCCGGTCCg                                                    <  7:168732/138‑1 (MQ=255)
                                                                                       tgttgAAATAAAGCGCTAGCCAAATGACGATCGGCATAATGATAAACGTTAATAAAGCAAGCTGCCAGTTAATAAACAGCATCACTCCGAACGCCCCGAGAATGGTCATGACCGCAATGAATAAGTCTTCCGGTCCGt                                                   >  5:245394/1‑138 (MQ=255)
                                                                                                     gcTAGCCAAATGACGATCGGCATAATGATAAACGTTAATAAAGCAAGCTGCCAGTTAATAAACAGCATCACTCCGAACGCCCCGAGTATGGTCATGACCGCAATGAATAAGTCTTCCGGTCCGTGATGGGCGACTTCAc                                    <  8:284611/139‑1 (MQ=255)
                                                                                                      cTAGCCAAATGACGATCGGCATAATGATAAACGTTAATAAAGCAAGCTGcc                                                                                                                           <  2:348793/51‑1 (MQ=255)
                                                                                                      cTAGCCAAATGACGATCGGCATAATGATAAACGTTAATAAAGCAAGCTGcc                                                                                                                           >  1:348793/1‑51 (MQ=255)
                                                                                                       tAGCCAAATGACGATCGGCATAATGATAAACGTTAATAAAGCAAGCTGCCAGTTAATAAACAGCATCACTCCGAACGCCCCGAGAATGGTCATGACCGCAATGAATAAGTCTTCCGGTCCGTGATGGGCGACTTCAcc                                   >  8:381038/1‑138 (MQ=255)
                                                                                                         gCCAAATGACGATCGGCATAATGATAAACGTTATTAAAGCAAGCTGCCAGTTAATAAACAGCATCACTCCGAACGCCCCGAGAATGGTCATGACCGCAATGAATAAGTCTTCCGGTCCGTGATGGGCGACTTCACCGat                                <  4:185539/139‑1 (MQ=255)
                                                                                                         gCCAAATGACGATCGGCATAATGATAAACGTTATTAAAGCAAGCTGCCAGTTAATAAACAGCATCACTCCGAACGCCCCGAGAATGGTCATGACCGCAATGAATAAGTCTTCCGGTCCGTGATGGGCGACTTCACCGat                                <  4:192350/139‑1 (MQ=255)
                                                                                                         gCCAAATGACGATCGGCATAATGATAAACGTTAATAAAGCAAGCTGCCAGTTAATAAACAGCATCACTCCGAACGCCCCGAGAATGGTCATGACCGCAATGAATAAGTCTTCCGGTCCGTGATGGGCGACTTCACCGat                                <  7:172408/139‑1 (MQ=255)
                                                                                                         gCCAAATGACGATCGGCATAATGATAAACGTTAATAAAGCAAGCTGCCAGTTAATAAACAGCATCACTCCGAACGCCCCGAGAATGGTCATGACCGCAATGAATAAGTCTTCCGGTCCGTGATGGGCGACTTCACCGat                                <  6:245394/139‑1 (MQ=255)
                                                                                                         gCCAAATGACGATCGGCATAATGATAAACGTTAATAAAGCAAGCTGCCAGTTAATAAACAGCATCACTCCGAACGCCCCGAGAATGGTCATGACCGCAATGAATAAGTCTTCCGGTCCGTGATGGGCGACTTCACCGat                                <  8:289869/139‑1 (MQ=255)
                                                                                                              aTGACGATCGGCATAATGATAAACGTTAATAAAGCAAGCTGCCAGTTAATAAACAGCATCACTCCGAACGCCCCGAGAATGGTCATGACCGCAATGAATAAGTCTTCCGGTCCGTGATGGGCGACTTCACCGATATACa                           >  2:84367/1‑139 (MQ=255)
                                                                                                                    aTCGGCATAATGATAAACGTTAATAAAGCAAGCTGCCAGTTAATAAACAGCATCACTCCGAACGCCCCGAGAATGGTCATGa                                                                              <  2:286774/82‑1 (MQ=255)
                                                                                                                    aTCGGCATAATGATAAACGTTAATAAAGCAAGCTGCCAGTTAATAAACAGCATCACTCCGAACGCCCCGAGAATGGTCATGa                                                                              >  1:286774/1‑82 (MQ=255)
                                                                                                                                 tAAACGTTAATAAAGCAAGCTGCCAGTTAATAAACAGCATCACTCCGAACGCCCCGAGAATGGTCATGACCGCAATGAATAAGTCTTCCGGTCCGTGATGGGCGACTTCACCGATATACATTAAATCGTTCGTGAGCtt        <  1:372212/139‑1 (MQ=255)
                                                                                                                                 tAAACGTTAATAAAGCAAGCTGCCAGTTAATAAACAGCATCACTCCGAACGCCCCGAGAATGGTCATGACCGCAATGAATAAGTCTTCCGGTCCGTGATGGGCGACTTCACCGATATACATTAAATCGTTCGTGAGCtt        >  3:284083/1‑139 (MQ=255)
                                                                                                                                   aaCGTTAATAAAGCAAGCTGCCAGTTAATAAACAGCATCACTCCGAACGCCCCGAGAATGGTCATGACCGCAATGAATAAGTCTTCCGGTCCGTGATGGGCGACTTCACCGATATACATTaaa                      >  1:343168/1‑123 (MQ=255)
                                                                                                                                   aaCGTTAATAAAGCAAGCTGCCAGTTAATAAACAGCATCACTCCGAACGCCCCGAGAATGGTCATGACCGCAATGAATAAGTCTTCCGGTCCGTGATGGGCGACTTCACCGATATACATTaaa                      <  2:343168/123‑1 (MQ=255)
                                                                                                                                   aaCGTTAATAAAGCAAGCTGCCAGTTAATAAACAGCATCACTCCGAACGCCCCGAGAATGGTCATGACCGCAATGAATAAGTCTTCCGGTCCGTGATGGGCGACTTCACCGATATACATTAAATCGTTCGTGAGCTTc       >  7:29617/1‑138 (MQ=255)
                                                                                                                                   aaCGTTAATAAAGCAAGCTGCCAGTTAATAAACAGCATCACTCCGAACGCCCCGAGAATGGTCATGACCGCAATGAATAAGTCTTCCGGTCCGTGATGGGCGACTTCACCGATATACATTAAATCGTTCGTGAGCTTc       >  4:246531/1‑138 (MQ=255)
                                                                                                                                   aaCGTTAATAAAGCAAGCTGCCAGTTAATAAACAGCATCACTCCGAACGCCCCGAGAATGGTCATGACCGCAATGAATAAGTCTTCCGGTCCGTGATGGGCGACTTCACCGATATACATTAAATCGTTCGTGAGCTTc       >  5:216983/1‑138 (MQ=255)
                                                                                                                                        taataaAGCAAGCTGCCAGTTAATAAACAGCATCACTCCGAACGCCCCGAGAATGGTCATGACCGCAATGAATAAGTCTTCCGGTCCGTGATGGGCGACTTCACCGATATACATTAAATCTTTCTTGAGCTTCGACAt  >  4:202468/1‑138 (MQ=255)
                                                                                                                                         aataaAGCAAGCTGCCAGTTAATAAACAGCATCACTCCGAACGCCCCGAGAATGGTCATGACCGCa                                                                         >  1:52462/1‑66 (MQ=255)
                                                                                                                                         aataaAGCAAGCTGCCAGTTAATAAACAGCATCACTCCGAACGCCCCGAGAATGGTCATGACCGCa                                                                         <  2:52462/66‑1 (MQ=255)
                                                                                                                                          |                                                                                                                                       
GCCGGATGCCGCCGATGTTATTTTCTACACGCGCGCTGAAGTCTCCGATATCCTTGTTCAGCGTGGTAAATGCTTTGGTCATTTTTTTGTTGAAATAAAGCGCTAGCCAAATGACGATCGGCATAATGATAAACGTTAATAAAGCAAGCTGCCAGTTAATAAACAGCATCACTCCGAACGCCCCGAGAATGGTCATGACCGCAATGAATAAGTCTTCCGGTCCGTGATGGGCGACTTCACCGATATACATTAAATCGTTCGTGAGCTTCGACAT  >  CP006881/3638724‑3638997

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: