| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP006881 | 3,680,919 | T→C | 5.3% | N62D (AAT→GAT) | U712_18965 ← | putative transporter ywfM |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 3,680,919 | 0 | T | C | 5.3% | 229.4 / 3.5 | 75 | N62D (AAT→GAT) | U712_18965 | putative transporter ywfM |
| Reads supporting (aligned to +/- strand): ref base T (30/41); new base C (2/2); total (32/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.47e-01 | |||||||||||
TCCCGGCAATGATAGGCGCACTGCCGATGGCAATCACAGTTCCCACTGCAATTCCCGTTTCTTTAACCGCTGTG‑AAAAACAGCGGCTGGTAACACGCCATACAAACAGCGGCTAAAAATACGAGCGGCCATGCCCAATTTTTCACGTGAAGCTCCCGGCTGATCCAAACCGCAAGCAGCATGGCGCTTCCTCCTATTAATAACCTGAACGCTCCAAATGCCAGCGGTGTGGCGCTTTCTGGAGCCAATGCCTGAACGGTTCCCGTGGTCCCCCAG > CP006881/3680781‑3681055 | tCCCTGCAATGATAGGCGCACTGCCGATGGCAATCACAGTTCCCACTGCAATTCCCGTTTCTTTAACCGCTGTG‑AAAAACAGCGGCTGGTAACACGCCATACAAACAGCGGCTAAAAATACGAGCGGCCATGCCCAAtt > 8:357440/1‑139 (MQ=255) ccGGCAATGATAGGCGCACTGCCGATGGCAATCACAGTTCCCACTGCAATTCCCGTTTCTTTAACCGCTGTG‑AAAAACAGCGGCTGGTAACACGCCATACAAACAGCGGCTAAAAATACGAGCGGCCATGCCCCAtttt > 8:294418/1‑139 (MQ=255) ccGGCAATGATAGGCGCACTGCCGATGGCAATCACAGTTCCCACTGCAATTCCCGTTTCTTTAACCGCTGTG‑AAAAACAGCGGCTGGTAACACGCCATACAAACAGCGGCTAAAAATACGAGCGGCCATGCCCAAtttt > 7:94205/1‑139 (MQ=255) ccGGCAATGATAGGCGCACTGCCGATGGCAATCACAGTTCCCACTGCAATTCCCGTTTCTTTAACCGCTGTG‑AAAAACAGCGGCTGGTAACACGCCATACAAACAGCGGCTAAAAATACGAGCGGCCATGCCCAAtttt > 2:53831/1‑139 (MQ=255) tGATAGGCGCACTGCCGATGGCAATCACAGTTCCCACTGCAATTCCCGTTTCTTTAACCGCTGTG‑AAAAACAGCTGCTGGTAACACGCCATACAAACAGCGGATAAAAATACTATCGGCCATGCCCAATTTTTCAc > 8:93109/1‑136 (MQ=255) cgcACTGCCGATGGCCATCACAGGTCCCACTGCAATTCCCGTTTCTTTAACCGCTGTG‑AAAACCAGCGGCTGGTCACACGCCATCCAAACCGCGGCTATAAATACGAGCGGCCCTGCCGCATTTTTCCCGTGAAGCTcc > 7:41644/1‑139 (MQ=255) cgcACTGCCGATGGCAATCACAGTTCCCACTGCAATTCCCGTTTCTTTAACCGCTGTC‑AAAAACAGCGGCTGGTAACACGCCATACAACCAGCGGCTAAAAATACGAGCGGCCATGCACAATTTTTCACCTGAAGCTcc > 4:175683/1‑139 (MQ=255) tGCCGATGGCAATCACAGTTCCCACTGCAATTCCCGTTTCTTTAACCGCTGTG‑AAAAACAGCGGCTGGTAACACGCCATACAAACAGCGGCTAAAAATACGAGCGGCCATGCCCAATTTTTCACGTGAAGCTCCCGGCt > 2:182394/1‑139 (MQ=255) aTGGCAATCACAGTTCCCACTGCAATTCCCGTTTCTTTAACCGCTGTG‑AAAAACAGCGGCTGGTACCCCGCCATACAAACAGCGGCTAAATATACGAGCGGCCATGCCCAATTTTTCACGTGAAGCTCCCGGCTGCTcc > 3:316604/1‑139 (MQ=255) aTGGCAATCACAGTTCCCACTGCAATTCCCGTTTCTTTAACCGCTGTG‑AAAAACAGCGGCTGGTAACACGCCATACAAACAGCGGCTAAAAATACGAGCGGCCATGCCCAATTTTTCACGTGAAGCTCCCGGCTGATc > 5:200972/1‑138 (MQ=255) aTGGCAATCACAGTTCCCACTGCAATTCCCGTTTCTTTAACCGCTGTG‑AAAAACAGCGGCTGGTAACACGCCATACAAACAGCGGCTAAAAATACGAGCGGCCATGCCCAATTTTTCACGTGAAGCTCCCGGCTGATc > 8:339123/1‑138 (MQ=255) aaTCACATTTCCCACTGCAATTCCCGTTTCTTTAACGGCTGTG‑AAAAACAGCGGCTGGTAACACGCCATACAAACAGCGGCTAAAAATACGAGCGGCCATGCCCAATTTTTCACGTGAAGCTCCCGGCTGATCCAAAcc < 4:247467/139‑1 (MQ=255) tCACAGTTCCCACTGCAATTCCCGTTTCTTTAACCGCTGTG‑AAAAACAGCGGCTGGTAACACGCCATACAAACAGCGGCTAAAAATACGAGCGGCCATGCCCAATTTTTCACGTGAAGCTCCCGGCTGATCCCAACCg > 7:251996/1‑138 (MQ=255) tCACAGTTCCCACTGCAATTCCCGTTTCTTTAACCGCTGTG‑AAAAACAGCGGCTGGTAACACGCCATACAAACAGCGGCTAAAAATACGAGCGGCCATGCCCAATTTTTCACGTGAAGCTCCCGGCTGATCCAAACCg > 2:214372/1‑138 (MQ=255) tCACAGTTCCCACTGCAATTCCCGTTTCTTTAACAGCTGTG‑AAAAACAGCGGCTGGTAACACGCCATACAAACAGCGGCTAAAAATACGAGCGGCCATGCCCAATTTTTCACGTGAAGCTCCCGGCTGATCCAAACCGc > 4:68978/1‑139 (MQ=255) tCACAGTTCCCACTGCAATTCCAGTTTCTTTAACCGCTGTG‑AAAAACAGCGGCTGGTAACACGCCATACAAACAGCGGCTAAAAATACGAGCTGCCATGCCCAATTTTTCACGTGAAGCTCCCGGCTGATCCAACCCg > 5:33638/1‑138 (MQ=255) caccGTTCCCACTGCAATTCCGGTTCCTTAACCCGC‑GTGTAAAAACAGCGGCTGGTAACACGCCATACAAACAGCGGCTAAAAATACGAGCGGCCATGCCCAATTTTTCACGTGAAGCTCCCGGCTGATCCAAACCGCa < 8:257627/139‑1 (MQ=255) acaGTTCCCACTGCAATTCCCGTTTCTTTAACCGCTGTG‑AAAAACAGCGGCTGGTAACACGCCATACAAACAGCGGCTAAAAATACGAGCGGCCATGCCCAATTTTTCACGTGAAGCTCCCGGCTGATCCAAACCGCa < 6:309279/138‑1 (MQ=255) acaGTTCCCACTGCAATTCCCGTTTCTTTAACCGCTGTG‑AAAAACAGCGGCTGGTAACACGCCATACAAACAGCGGCTAAAAATACGAGCGGCCATGCCCAATTTTTCACGTGAAGCTCCCGGCTGATCCAAACCGCa < 5:382678/138‑1 (MQ=255) caGTTCCCACTGCAATTCCCGTTTCTTTAACCGCTGTG‑AAAAACAGCGGCTGGTAACACGCCATACAAACAGCGGCTAAAAATACGAGCGGCCATGCCCAATTTTTCACGTGAAGCTCCCGGCTGATCCAAACCGCAag < 1:60449/139‑1 (MQ=255) aaGTTACCACTGCAATGCCCGTTTCTTAACCCGCTGTT‑AAAACCCGCGGCTGGTAACAAGCCATACAAACAGCGGCTAAAAATACGAGCGGCCATGCCCAATTTTTCACGTGAAGCTCCCGGCTGATCCAAACCTCAag < 6:33638/138‑1 (MQ=255) ttCCCACTGCAATTCCCGTTTCTTTAACCGCTGTG‑AAAAACAGCGGCTGGTAACACGCCATACAAACAGCGGCTAAAAATACGAGCGGCCATGCCCAATTTTTCACGTGAAGCTCCCGGCTGATCCAAACCGCAagcag > 3:64794/1‑139 (MQ=255) cccACTGCAATTCCCGTTTCTTTAACCGCTGTG‑AAAAACAGCGGCTGGTAACACGCCATACAAACAGCGGCTAAAAATACGAGCGGCCATGCCCAATTTTTCACGTGAAGCTCCCGGCTGATCCAAACCGCAAgcagca > 8:140634/1‑139 (MQ=255) cccACTGCAATTCCCGTTTCTTTAACCGCTGTG‑AAAAACAGCGGCTGGTAACACGCCATACAAACAGCGGCTAAAAATACGAGCGGCCATGCCCAATTTTTCACGTGAAGCTCCCGGCTGATCCAAACCGCAAgcagca > 1:319654/1‑139 (MQ=255) aCTGCAATTCCCGTTTCTTTAACCGCTGTG‑AAAAACAGCGGCTGGTAACACGCCATACAAACAGCGGCTAAAAATACGAGCGGCCATGCCCAATTTTTCACGTGAAGCTCCCGGCTGATCCAAACCGCAAGCAGCATgg > 6:155179/1‑139 (MQ=255) aCTGCAATTCCCGTTTCTTTAACCGCTGTG‑AAAAACAGCGGCTGGTAACACGCCATACAAACAGCGGCTAAAAATACGAGCGGCCATGCCCAATTTTTCACGTGAAGCTCCCGGCTGATCCAAACCGCAAGCAGCATgg > 1:239757/1‑139 (MQ=255) aTTCCCTTTTCTTAAACCGCTGTG‑AAAAACAGCGGCTGGTAACACGCCATACAAACAGCGGCTAAAAATACGAGCGGCCATGCCCAATTTTTCACGTGAAGCTCCCGGCTGATCCAAACCGCAAGCAGCATGGCGCTtc < 7:72119/139‑1 (MQ=255) aTTCCCGTTTCTTTAACCGCTGTG‑AAAAACAGCGGCTGGTAACACGCCATACAAACAGCGGCTAAAAATACGAGCGGCCATGCCCAATTTTTCACGTGAAGCTCCCGGCTGATCCAAACCGCAAGCAGCATGGCGCTtc < 8:329839/139‑1 (MQ=255) aTTCCCGTTTCTTTAACCGCTGTG‑AAAAAAAGCGGCTGGTAACACGCCATACAAACAGCGGCTAAAAATACGAGCGGCCATGCCCAATTTTTCACGTGAAGCTCCCGGCTGATCCAAACCGCAAGCAGCATGGCGCTtc < 8:94205/139‑1 (MQ=255) ttCCCGTTTCTTTAACCGCTGTG‑AAAAACAGCGGCTGGTAACACGCCATACAAACAGCGGCTAAAAATACGAGCGGCCATGCCCAATTTTTCACGTGAAGCTCCCGGCTGATCCAAACCGCAAGCAGCATGGCGCTtcc > 5:41612/1‑139 (MQ=255) ccGTTTCTTTACCCGCTTTT‑AAAAACAGCGGCTGGTAACACGCCATACAAACAGCGGCTAAAAATACGAGCGGCCATGCCCAATTTTTCACGTGAAGCTCCCGGCTGATCCAAACCGCAAGCAGCATGGCGCTtcctcc < 4:64794/139‑1 (MQ=255) ccGTTTCTTTACCAGCTGTG‑AAAAACAGCGGCTGGTAACACGCCATACAAACAGCGGCTAAAAATACGAGCGGCCATGCCCAATTTTTCACGTGAAGCTCCCGGCTGATCCAAACCGCAAGCAGCATGGCGCTtcctcc < 8:84106/139‑1 (MQ=255) ccGTTTCTTTAACCGCTGTG‑AAAAACAGCGGCTGGTAACACGCCATACAAACAGCGGCTAAAAATACGAGCGGCCATGCCCAATTTTTCACGTGAAGCTCCCGGCTGATCCAAACCGCAAGCAGCATGGCGCTtcctcc < 5:362460/139‑1 (MQ=255) ccGTTTCTTTAACCGCTGTG‑AAAAACAGCGGCTGGTAACACGCCATACAAACAGCGGCTAAAAATACGAGCGGCCATGCCCAATTTTTCACGTGAAGCTCCCGGCTGATCCAAACCGCAAGCAGCATGGCGCTtcctcc < 7:339123/139‑1 (MQ=255) ccGTTTCTTTAACCGCTCTG‑AAAAACCGCGGCTGGTAACACGCCATACAAACAGCGGCTAAAAATACGAGCGGCCATGCCCAATTTTTCACGTGAAGCTCCCGGCTGATCCAAACCGCAAGCAGCATGGCGCTtcctcc < 5:66576/139‑1 (MQ=255) gTTTCTTTAACCGCTGTG‑AAAAACAGCGGCTGGTAACACGCCATACAAACAGCGGCTAAAAATACGAGCGGCCATGCCCAATTTTTCACGTGAAGCTCCCGGCTGATCCAAACCGCAAGCAGCATGGCGCt > 6:184974/1‑131 (MQ=255) gTTTCTTTAACCGCTGTG‑AAAAACAGCGGCTGGTAACACGCCATACAAACAGCGGCTAAAAATACGAGCGGCCATGCCCAATTTTTCACGTGAAGCTCCCGGCTGATCCAAACCGCAAGCAGCATGGCGCt < 5:184974/131‑1 (MQ=255) cTTTAACCGCTGTT‑AAAAACTGCGGCTGGTAACACGCCATACAAACAGCGGCTAAAAATACGAGCGGCCATGCCCAATTTTTCACGTGAAGCTCCCGGCTGATCCAAACCGCAAGCAGCATGGCGCTTCCTCCTATta < 1:65681/138‑1 (MQ=255) aCCGCTGTG‑AAAAACAGCGGCTGGTAACACGCCATACAAACAGCGGCTAAAAATACGAGCGGCCATGCCCAATTTTTCACGTGAAGCTCCCGGCTGATCCAAACCGCAAGCAGCATGGCGCTTCCTCCTATTAATAAc < 7:323443/138‑1 (MQ=255) ctttg‑AAAAACAGCGGATGGTAACACGCCATACAAACAGCGGATAAAAATACGAGCGGCCATGCCCAATTTTTCACGTGAAGCTCCCGGCTGATCCAAACCGCAAGCAGCATGGCGCTTCCTCCTATTAATAACCTGaa < 8:251996/136‑1 (MQ=255) cTGTG‑AAAACCAGCGGCTGGTAACACGCCATACAAACAGCGGATAAAAATACGAGCGGCCATGCCCAATTTTTCACGTGAAGCTCCCGGCTGATCCAAACCGCAAGCAGCATGGCGCTTCCTCCTATTAATAACCTGaa < 1:336626/139‑1 (MQ=255) cTGTG‑AAAAACAGCGGCTGGTAACACGCCATACAAACAGCGGCTAAAAATACGAGCGGCCATGCCCAATTTTTCACGTGAAGCTCCCGGCTGATCCAAACCGCAAGCAGCATGGCGCTTCCTCCTATTAATAACCTGaa < 4:33735/139‑1 (MQ=255) tgtttaaaatCTGCGGCTGGTAACACGCCATACAAACAGCGGCTAAAATTACGAGCGGCCATGCCCAATTTTTCACGTGAAGCTCCCGGCTGATCCAAACCGCAAGCAGCATGGCGCTTCCTCCTATTAATAACCTGaa < 4:353209/134‑1 (MQ=255) tgtg‑AAAAACAGCGGCTGGTAACACGCCATACAACCAGCGGCTAAAAATACGAGCGGCCATGCCCAATTTTTCACGTGAAGCTCCCGGCTGATCCAAACCGCAAGCAGCATGGCGCTTCCTCCTATTAATAACCTGAAc > 5:194408/1‑139 (MQ=255) tgtg‑AAAAACAGCGGCTGGTAACACGCCATACAAACAGCGGCTAAAAATACGAGCGGCCATGCCCAATTTTTCGCGTGACGCTCCCGGCTGATCCAAGCAGCAAGCAGCATGGCGCTTCCTGGTATTAATAACCTGAAc > 1:350355/1‑139 (MQ=255) tgtg‑AAAAACAGCGGCTGGTAACACGCCATACAAACAGCGGCTAAAAATACGAGCGGCCATGCCCAAATTTTAACGTGAAGCACCCCGCATAACCAAACCGCAAGCAGCATGGCCCATCCACCTAATAATAAACTGAAc > 2:65681/1‑139 (MQ=255) tg‑AAAAACAGCGGCTGGTAACACGCCATACAAACAGCGGCTAAAAATACGAGCGGCCATGCCCAATTTTTCACGTGAAGCTCCCGGCTGATCCAAACCGCAAGCAGCATGGCGCTTCCTCCTATTAATAACCTGAACg < 6:200972/138‑1 (MQ=255) aaCAGCGGCTGGTAACACGCCATACAAACAGCGGCTAAAAATACGAGCGGCCATGCCCAATTTTTCACGTGAAGCTCCCGGCTGATCCAAACCGCAAGCAGCATGGCGCTtcctcc > 3:156869/1‑116 (MQ=255) aaCAGCGGCTGGTAACACGCCATACAAACAGCGGCTAAAAATACGAGCGGCCATGCCCAATTTTTCACGTGAAGCTCCCGGCTGATCCAAACCGCAAGCAGCATGGCGCTtcctcc < 4:156869/116‑1 (MQ=255) cAGCGGCTGGTAACACGCCATACAACCAGCGGAAAAAAATACGAGCGGCCATGCCCAATTTTTCACGTGAAGCTCCCGGCTGATCCAAACCGCAAGCAGCATGGCGCTTCCTCCTATTAATAACCTGAACGCTCCAAAt < 2:239757/139‑1 (MQ=255) cGGCTGGTAACACGCCATACAAACAGCGGCTAAAAATACGAGCGGCCATGCCCAATTTTTCACGTGAAGCTCCCGGCTGATcc > 5:70401/1‑83 (MQ=255) cGGCTGGTAACACGCCATACAAACAGCGGCTAAAAATACGAGCGGCCATGCCCAATTTTTCACGTGAAGCTCCCGGCTGATcc < 6:70401/83‑1 (MQ=255) gCTGGTAACACGCCATACAAACAGCGGCTAAAAATACGAGCGGCCATGCCCAATTTTTCACGTGAAGCTCCCGGCTGATCCAAACCGCAAGCAGCATGGCGCTTCCTCCTATTAATAACCTGAACGCTCCAAATGCCAg < 3:238408/139‑1 (MQ=255) gCTGGTAACACGCCATACAAACAGCGGCTAAAAATACGAGCGGCCATGCCCAATTTTTCACGTGAAGCTCCCGGCTGATCCAAACCGCAAGCAGCATGGCGCTTCCTCCTATTAATAACCTGAACGCTCCAAATGCCAg < 1:92189/139‑1 (MQ=255) gCTGGTAACACGCCATACAAACAGCGGCTAAAAATACGAGCGGCCATGCCCAATTTTTCACGTGAAGCTCCCGGCTGATCCAAACCGCAAGCAGCATGGCGCTTCCTCCTATTAATAACCTGAACGCTCCAAATGCCAg > 6:96953/1‑139 (MQ=255) tAACACGCCATACAAACAGCGGCTAAAAATACGAGCGGCCATGCCCAATTTTTCACGTGAAGCTCCCGGCTGATCCAAACCGCAAGCAGCATGGCGCTTCCTCCTATTAATAACCTGAACGCTCCAAATGCCAGCGgtg < 4:392300/139‑1 (MQ=255) cGCCATACAAACAGCGGCTAAAAATACGAGCGGCCATGCCCAATTTTTCACGTGAAGCTCCCGGCTGATCCAAACCGCAAGCAGCATGGCGCTTCCTCCTATTAATAACCTGAACGCTCCAAATGCCAGCGGTGTGgcg < 2:319654/139‑1 (MQ=255) gCCATACAAACAGCGGCTAAAAATACGAGCGGCCATGCCCAATTTTTCACGTGAAGCTCCCGGCTGATCCAAACCGCACGCAGCTTGGCGCTTCCTCCTATAAATAACCTGAACGCTCCAAATGCCAGCGGTGTGgcgc < 5:285043/139‑1 (MQ=255) tACAAACAGCGGCTAAAAATACGAGCGGCCATGCCCATTTTTTCACGAGAAGCTCCCGGCTGATCCAACCCGCAAGCAGCATGGCGCTTCCTCCTATTAATAACCTGAACGCTCCAAATGCCAGCGGTGTGGCGCTTTc > 7:287596/1‑139 (MQ=255) tACAAACAGCGGCTAAAAATACGAGCGGCCATGCCCAATTTTTCACGTGAAGCTCCCGGCTGATCCAAACCGCAAGCAGCATGGCGCTTCCTCCTATTAATAACCTGAACGCTCCAAATGACAGCGGTGTGGAGCTTTc > 1:393873/1‑139 (MQ=255) aacaCAGCGGCTAAAAATACGAGCGGCCCTGACCAATTTTTCACGTGAAGCTCCCGGCTGATCAAAACCGCAAGCAGCATGGCGCTTCCTCCTATTAATAACCTGAACGCTCCAAATGCCAGCTGTGTGGCGCTTTCTg < 3:312108/136‑1 (MQ=255) aGCGGCTAAAAATACGAGGGGCCATGCCCAATTTTTCACGTGAAGCTCCCGGCTGATCCAAACCGCAAGCAGCATGGCGCTTCCTCCTATTAATAACCTGAACGCTCCAAATGCCAGCGGTGTGGCGCTTTCTGGAGcc < 4:368292/139‑1 (MQ=255) cGGCTAAAAATCCGAGCGGCCATGCCCAATTTTTCACGTGAAGCTCCCGGCTGATCCAAACCGCAAGCAGCATGGCGCTTCCTCCTATTAATAACCTGAACGCTCCAAATGCCAGCGGTGTGGCGCTTTCTGGAGCCaa < 4:271254/139‑1 (MQ=255) cGGCTAAAAATACGAGCGGCCATGCCCAATTTTTCACGTGAAGCTCCCGGCTGATCCAAACGGCAAGCAGCATGGCGCTTCCTCCTATTAATAACCTGAACGCTCCAAATGCCAGCGGTGTGGCGCTTTCTGGAGCCaa < 7:93109/139‑1 (MQ=255) gCTAAAAATACGAGCGGCCATGCCCAATTTTTCACGTGAAGCTCCCGGCTGATCCAAACCGCAAGCAGCATGGCGCTTCCTCCTATTAATAACCTGAACGCTCCAAATGCCAGCGGTGTGGCGCTTTCTGGAGcc < 2:13476/135‑1 (MQ=255) gCTAAAAATACGAGCGGCCATGCCCAATTTTTCACGTGAAGCTCCCGGCTGATCCAAACCGCAAGCAGCATGGCGCTTCCTCCTATTAATAACCTGAACGCTCCAAATGCCAGCGGTGTGGCGCTTTCTGGAGcc > 1:13476/1‑135 (MQ=255) gCTAAAAATACGAGCGGCCATGCCCAATTTTTCACGTGAAGCTCCCGGCTGATCCAAACCGCAAGCAGCATGGCGCTTCCTCCTATTAATAACCTGAACGCTCCAAATGCCAGCGGTGTGGCGCTTTCTGGAGCCAATg > 7:163870/1‑139 (MQ=255) gCTAAAAATACGAGCGGCCATGCCCAATCTTTCACGTGAAGCTCCCGGCTGATCCAAACCGCAAGCAGCATGGCGCTTCCTCCTATTAATAACCTGAACGCTCCAAATGCCAGCGGTGTGGCGCTTTCTGGAGcc < 7:407621/135‑1 (MQ=255) gCTAAAAATACGAGCGGCCATGCCCAATCTTTCACGTGAAGCTCCCGGCTGATCCAAACCGCAAGCAGCATGGCGCTTCCTCCTATTAATAACCTGAACGCTCCAAATGCCAGCGGTGTGGCGCTTTCTGGAGcc > 8:407620/1‑135 (MQ=255) gCTAAAAATACGAGCGGCCATGCCCAATCTTTCACGTGAAGCTCCCGGCTGATCCAAACCGCAAGCAGCATGGCGCTTCCTCCTATTAATAACCTGAACGCTCCAAATGCCAGCGGTGTGGCGCTTTCTGGAGcc > 8:407621/1‑135 (MQ=255) gCTAAAAATACGAGCGGCCATGCCAAATCTTTCACGTGAAGCTCCCGGCTGATCCAAACCGCAAGCAGCATGGCGCTTCCTCCTATTAATAACCTGAACGCTCCAAATGCCAGCGGTGTGGCGCTTTCTGGAGcc < 7:407620/135‑1 (MQ=255) aaagcGAGAGGCCATGCCCAATTTTTCACGTGAAGCTCCGGGCTGATCCAAACCGCTAGCAGCATGGCGCTTCCTCATATTAATAACCTGAACGCTCCAAATGCCAGCGGTGTGGCGCTTTCTGGAGCCAATGCCTGaa < 6:41612/135‑1 (MQ=255) aaTACGAGCGGCCATGCCCAATTTTTCTCGTGAAGCTCCCGGCTGATCCAAACCGCAAGCAGCATGGCGCTTCCTCCTATTAATAACCTGAACGCTCCAAATGCCAGCGGTGTGGCGCTTTCTGGAGCCAATGCCTGaa < 8:287596/139‑1 (MQ=255) aaTACGAGCGGCCATGCCCAATTTTTCACGTGAAGCTCCCGGCTGATCCAAACCGCAAGCAGCATGGCGCTTCCTCCTATTAATAACCTGAACGCTCCAAATGCCAGCGGTGTGGCGCTTTCTGGAGCCAATGCCTGaa < 1:214372/139‑1 (MQ=255) aTACGAGCGGCCATGCCCAATTTTTCACGTGAAGCTCCCGGCTGATCCAAACCGCAAGCAGCATGGCGCTTCCTCCTATTAATAACCTGAACGCTCCAAATGCCAGCGGTGTGGCGCTTTCTGGAGCCAATGCCTGAAc < 5:155179/139‑1 (MQ=255) aTACGAGCGGCCATGCCCAATTTTTCACGTGAAGCTCCCGGCTGATCCAAACCGCAAGCAGCATGGCGCTTCCTCCTATTAATAACCTGAACGCTCCAAATGCCAGCGGTGTGGCGCTTTCTGGAGCCAATGCCTGAAc < 8:219336/139‑1 (MQ=255) gCCATGCCCAATTTTTCACGTGAAGCTCCCGGCTGATCCAAACCGCAAGCAGCATGGCGCTTCCTCCTATTAATAACCTGaa < 4:10501/82‑1 (MQ=255) gCCATGCCCAATTTTTCACGTGAAGCTCCCGGCTGATCCAAACCGCAAGCAGCATGGCGCTTCCTCCTATTAATAACCTGaa > 3:10501/1‑82 (MQ=255) gCCATGCCCAATTTTTCACGTGAAGCTCCCGGCTGATCCAAACCGCAAGCAGCATGGCGCTTCCTCCTATTAATAACCTGAACGCTCCAAATGCCAGCGGTGTGGCGCTTTCTGGAGCCAATGCCTGAACGGTTCCCGt > 2:66776/1‑139 (MQ=255) tttttCACGTGAAGCTCCCGGCTGATCCAAACCGCAAGCAGCATGGCGCTTCCTCCTATTAATAACCTGAACGCTCCAAATGCCAGCGGTGTGGCGCTTTCTGGAGCCAATGCCTGAACGGTTCCCGTGGTCCCCCAg > 7:340224/1‑138 (MQ=255) tttttCACGTGAAGCTCCCGGCTGATCCAAACCGCAAGCAGCATGGCGCTTCCTCCTATTAATAACCTGAACGCTCCAAATGCCAGCGGTGTGGCGCTTTCTGGAGCCAATGCCTGAACGGTTCCCGTGGTCCCCCAg > 1:177792/1‑138 (MQ=255) | TCCCGGCAATGATAGGCGCACTGCCGATGGCAATCACAGTTCCCACTGCAATTCCCGTTTCTTTAACCGCTGTG‑AAAAACAGCGGCTGGTAACACGCCATACAAACAGCGGCTAAAAATACGAGCGGCCATGCCCAATTTTTCACGTGAAGCTCCCGGCTGATCCAAACCGCAAGCAGCATGGCGCTTCCTCCTATTAATAACCTGAACGCTCCAAATGCCAGCGGTGTGGCGCTTTCTGGAGCCAATGCCTGAACGGTTCCCGTGGTCCCCCAG > CP006881/3680781‑3681055 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |