Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP006881	3,723,130	A→T	intergenic (‑244/‑57)	U712_19190 ← / → U712_19195	PTS system sucrose‑specific EIIBC component/putative transporter ywcJ

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP006881	3,723,130	0	A	T	100.0%	315.7 / NA	88	intergenic (‑244/‑57)	U712_19190/U712_19195	PTS system sucrose‑specific EIIBC component/putative transporter ywcJ
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base T (29/59);  total (29/59)

CCAGTCACAATCCCGCTTATTCAGATTGAGAATACGCTTTCATCATAAATTATGATAGCGTTTTCGTCAAC‑T‑GTTTTTTAGTTAAATAGTTTGATAAAACTTTTAGACAAAAATTCGTAAAAACTATTTGTGAAAAACTTCACAATATCGTGCTATACTATGCTCAACCATCAAAGAAAGCAGGAAAAAACAATGGAAACTCAAGCATTGCAAAAAGTTGAACAGTACGCTTTGAACAAACTAAACATATTTGTTTCTAGCAA  >  CP006881/3722995‑3723257                                                                                                                                          |                                                                                                                                ccAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATAc                                                                                                                               >  7:61552/1‑139 (MQ=255)  cAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACt                                                                                                                              <  7:32828/139‑1 (MQ=255)     tCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTca                                                                                                                           <  8:61552/139‑1 (MQ=255)     tCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTca                                                                                                                           <  5:285547/139‑1 (MQ=255)     tCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTca                                                                                                                           <  4:372745/139‑1 (MQ=255)       acaATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATTTTTTTAGTTAAATAGTTTGATATAACATGTTGACAAAAATTCGTAAAAATTAATTGTGAAATACTTcac                                                                                                                          >  6:218686/1‑138 (MQ=255)          aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                                                      <  3:198349/139‑1 (MQ=255)          aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                                                      <  2:293346/139‑1 (MQ=255)          aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                                                      <  3:377875/139‑1 (MQ=255)          aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                                                      <  2:153539/139‑1 (MQ=255)          aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                                                      <  3:79694/139‑1 (MQ=255)          aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                                                      <  2:115681/139‑1 (MQ=255)          aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                                                      <  4:119639/139‑1 (MQ=255)          aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                                                      <  4:128448/139‑1 (MQ=255)          aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                                                      <  4:334759/139‑1 (MQ=255)          aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                                                      <  1:377698/139‑1 (MQ=255)          aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                                                      <  7:35482/139‑1 (MQ=255)          aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                                                      <  7:355587/139‑1 (MQ=255)          aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                                                      <  1:276549/139‑1 (MQ=255)          aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                                                      <  8:215182/139‑1 (MQ=255)          aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                                                      <  8:379124/139‑1 (MQ=255)          aTCCCGCCTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGGTTTCGTCAAC‑TATTTTTTTAGTTAACTAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                                                      <  4:23500/139‑1 (MQ=255)          aTCCAGCTTAATCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAATAATTAATTGTGAAATACTTCACAata                                                                                                                      <  4:45016/139‑1 (MQ=255)           tCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATTTTTTTAGTTAAATAGTTTGATATAACATGTCGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAatat                                                                                                                     <  5:218686/139‑1 (MQ=255)             ccGCTTATTCAGATTAAGAATACGCTTTCATCATATATCATGATAGCGTTTTCGTCAACTT‑TTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAATATTCGTAAAAATTAATTGTGAAATACTTCACAATATc                                                                                                                    <  4:194849/138‑1 (MQ=255)             ccGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATc                                                                                                                    <  1:327877/138‑1 (MQ=255)             ccGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATc                                                                                                                    <  4:36304/138‑1 (MQ=255)             ccGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATc                                                                                                                    <  3:79510/138‑1 (MQ=255)               gCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTg                                                                                                                 <  1:51277/139‑1 (MQ=255)               gCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTg                                                                                                                 <  4:125384/139‑1 (MQ=255)               gCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTg                                                                                                                 <  3:215728/139‑1 (MQ=255)               gCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTg                                                                                                                 <  1:191647/139‑1 (MQ=255)               gCTTATTCAGATTAAGAATACGCTTTCATCATAAAACATGATAGCGTTTTCGTCAAC‑TATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTg                                                                                                                 <  1:52480/139‑1 (MQ=255)                cTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGc                                                                                                                >  1:129866/1‑139 (MQ=255)                cTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGc                                                                                                                >  7:242452/1‑139 (MQ=255)                   aTTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGc                                                                                                                >  4:24137/1‑136 (MQ=255)                   aTTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGc                                                                                                                <  3:24137/136‑1 (MQ=255)                     tCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATAc                                                                                                           >  1:40057/1‑139 (MQ=255)                       aGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTa                                                                                                         >  8:259914/1‑139 (MQ=255)                         aTTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACaa                                                                                                                        >  2:323628/1‑122 (MQ=255)                         aTTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACaa                                                                                                                        <  1:323628/122‑1 (MQ=255)                         aTTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                                                      >  7:288118/1‑124 (MQ=255)                         aTTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                                                      <  5:2159/124‑1 (MQ=255)                         aTTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                                                      <  1:376465/124‑1 (MQ=255)                         aTTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                                                      >  6:2159/1‑124 (MQ=255)                         aTTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                                                      >  2:376465/1‑124 (MQ=255)                         aTTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                                                      <  8:288118/124‑1 (MQ=255)                            aagaATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCt                                                                                                     <  4:124161/137‑1 (MQ=255)                            aagaATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCt                                                                                                     <  2:40057/137‑1 (MQ=255)                                 tACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTg                                                                                                                 >  6:100947/1‑121 (MQ=255)                                 tACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTg                                                                                                                 <  5:100947/121‑1 (MQ=255)                                   ctcTTTCATCATAAATCATGATAGCGTTTTCGTCAAA‑TAATTTTTTAATTAAATAATTTGAAATAAAATGTATAAAAAAATTCGTAAAAATTAATTGTGAAATAATTAAAAATATCTTGCTATACTATGATAAATCAt                                                                                              >  6:136429/3‑138 (MQ=255)                                   cGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                                                      <  8:281947/114‑1 (MQ=255)                                   cGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                                                      >  7:281947/1‑114 (MQ=255)                                   cGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCAt                                                                                              >  1:315963/1‑138 (MQ=255)                                   cGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCAt                                                                                              >  7:311060/1‑138 (MQ=255)                                   cGCTTTCATCATAAACCATGATAGCGTTTTCGTCAAC‑TATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCAt                                                                                              >  1:352140/1‑138 (MQ=255)                                         catcatAAATCATGATAGCGTTTTCGTCAAC‑TATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                                                      >  3:289007/1‑108 (MQ=255)                                         catcatAAATCATGATAGCGTTTTCGTCAAC‑TATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                                                      <  4:289007/108‑1 (MQ=255)                                           tcatAAATCATGATAGCGTTTTCGTCAAC‑TATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCAGAATATCGTGCTATACTATGCTCAATCATGaaagaaag                                                                                     <  1:267417/139‑1 (MQ=255)                                                aaTCATGATAGCGTTTTCGTCAAC‑TATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGa                                                                                <  5:57346/139‑1 (MQ=255)                                                    aTGATAGCGTTTTCGTCAAC‑TATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATg                                                                                                       <  3:124888/112‑1 (MQ=255)                                                    aTGATAGCGTTTTCGTCAAC‑TATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATg                                                                                                       >  4:124888/1‑112 (MQ=255)                                                    aTGATAGCGTTTTCGTCAAC‑TATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGaaagaaag                                                                                     <  5:206467/130‑1 (MQ=255)                                                    aTGATAGCGTTTTCGTCAAC‑TATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGaaagaaag                                                                                     >  6:206467/1‑130 (MQ=255)                                                     tGATAGCGTTTTCGTCAAC‑TATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGaaaaga                                                                           >  3:342463/1‑137 (MQ=255)                                                           cGTTTTCGTCAAC‑TATTTTTTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACATCACAATATCGTCCTATAGTATGATCAATCATCAAAGAAAGCAGGAAAAGACAAtc                                                                      >  8:61380/1‑137 (MQ=255)                                                                       actatttttttAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCa                                                          <  6:202420/134‑1 (MQ=255)                                                                       actatttttttAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCa                                                          <  8:242452/134‑1 (MQ=255)                                                                             tttttAGTTAAATAGTTTGATATAACATGTAGACAAAAATTAGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACa                                                     <  1:122545/138‑1 (MQ=255)                                                                                  aGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACaaaagg                                                <  8:311060/138‑3 (MQ=255)                                                                                   gTTATATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACAAAAGGtt                                              <  2:129866/139‑1 (MQ=255)                                                                                   gTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACAAAAGGtt                                              <  2:352140/139‑1 (MQ=255)                                                                                   gTTAAATAGTTTGATATAACATGTAGACAAAAATTAGTAAAAATTAATTGGGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCATGAAAAGACAATGGAAACTCAAGCATTACAAAAGGtt                                              <  2:192862/139‑1 (MQ=255)                                                                                              tGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACAAAAGGTTGAACAGTATGc                                   >  7:255273/1‑139 (MQ=255)                                                                                              tGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACAAAAGGTTGAACAGTATGc                                   >  3:283926/1‑139 (MQ=255)                                                                                                     acgtgtAGACAAAAATTCGTAAATATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACTAAAGGTTGAACAGTATGCTTTGaaa                            <  5:10203/134‑2 (MQ=255)                                                                                                      catgtAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACAAAAGGtt                                              >  2:40827/5‑120 (MQ=255)                                                                                                      catgtAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACAAAAGGtt                                              <  1:40827/116‑1 (MQ=255)                                                                                                      catgtAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACAAAAGGTTGAACAGTATGCTTTGaaa                            >  1:109130/5‑137 (MQ=255)                                                                                                      catgtAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACAAAAGGTTGAACAGTATGCTTTGaaa                            >  5:382102/5‑137 (MQ=255)                                                                                                          tAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACa                                                     >  6:189158/1‑109 (MQ=255)                                                                                                          tAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACa                                                     <  5:189158/109‑1 (MQ=255)                                                                                                           aGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACAAAAGGTTGaa                                           <  3:19367/118‑1 (MQ=255)                                                                                                           aGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACAAAAGGTTGaa                                           >  4:19367/1‑118 (MQ=255)                                                                                                            gACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACAAAAGGTTGAACAGTATGCTTTGAAAAAACaaa                     <  5:136429/139‑1 (MQ=255)                                                                                                                                aattGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACAAAAGGTTGAACAGTATGCTTTGAAAAAACAAAACATATTCGCTTCAAGCaa  <  8:255273/136‑1 (MQ=255)                                                                                                                                aattGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACAAAAGGTTGAACAGTATGCTTTGAAAAAACAAAACATATTCGCTTCAAGCaa  <  6:230879/136‑1 (MQ=255)                                                                                                                                          |                                                                                                                                CCAGTCACAATCCCGCTTATTCAGATTGAGAATACGCTTTCATCATAAATTATGATAGCGTTTTCGTCAAC‑T‑GTTTTTTAGTTAAATAGTTTGATAAAACTTTTAGACAAAAATTCGTAAAAACTATTTGTGAAAAACTTCACAATATCGTGCTATACTATGCTCAACCATCAAAGAAAGCAGGAAAAAACAATGGAAACTCAAGCATTGCAAAAAGTTGAACAGTACGCTTTGAACAAACTAAACATATTTGTTTCTAGCAA  >  CP006881/3722995‑3723257

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑