| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP006881 | 3,723,589 | G→C | A135P (GCT→CCT) | U712_19195 → | putative transporter ywcJ |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 3,723,589 | 0 | G | C | 99.2% | 459.2 / NA | 120 | A135P (GCT→CCT) | U712_19195 | putative transporter ywcJ |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base C (72/47); minor base A (1/0); total (73/47) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 120 total aligned reads displayed.
TCACTTATACCGCGCTCCGAAAAAAAATTCGCTGGCGAGACACCCTGTACCTGTGGATGTCAAGCTATGCCGGCAATTTGAT‑CGGCGCCATTCTATTTGCCATTCTGATCAGCGCGACAGGGCTTTTTGAGGAGGCTTCTGTTCATTCCTTTTTGATTCATCTGGCAGAGCACAAAATGGAGCCGCCCGCTTCCGAACTGTTTTTCAGAGGGATGCTGTGCAATTGGCTTGTGTGCCTCGCCTTTTTCATTCCAATGTCTCTTAAA > CP006881/3723455‑3723720 | tCACCTATACCGCGCTCCGGAAAAAAATCAGCTGGCGCGACACCCTATACTTGTGGATGTCAAGCTATGCCGGCAATTTAAT‑CGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGACGGGACTTTTTGAGGAGCCtt < 3:216394/138‑1 (MQ=255) acctataCCGCGCTCCGGAAAAAAATCAGCTGGCGCGACACCCTATACTTGTGGATGTCAAGCTATGCCGGCAATTTAAT‑CGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGACGGGACTTTTTGAGGAGCCtt > 4:400093/4‑136 (MQ=255) acctataCCGCGCTCCGGAAAAAAATCAGCTGGCGCGACACCCTATACTTGTGGATGTCAAGCTATGCCGGCAATTTAAT‑CGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTg > 2:158005/4‑139 (MQ=255) acctataCCGCGCTCCGGAAAAAAATCAGCTGGCGCGACACCCTATACTTGTGGATGTCAAGCTATGCCGGCAATTTAAT‑CGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTg > 6:371801/4‑139 (MQ=255) acctataCCGCGCTCCGGAAAAAAATCAGCTGGCGCGACACCCTATACTTGTGGATGTCAAGCTATGCCGGCAATTTAAT‑CGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTg > 5:2930/4‑139 (MQ=255) acctataCCGCGCTCCGGAAAAAAATCAGCTGGCGCGACACCCTATACTTGTGGATGTCAAGCTATGCCGGCAATTTAAT‑CGGCGCCATTCTGTTTGCCATCATGATCAGAGAGACGGGACTTTTTGAGGAGCCTTCTg > 8:265227/4‑139 (MQ=255) taCCGCGCTCCGGAAAAAAATCAGCTGGCGCGACACCCTATACTTGTGGATGTCAAGCTATGCCGGCAATTTAAT‑CGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCAt > 1:390387/1‑139 (MQ=255) cgcTCCGGAAAAAAATCAGCTGGCGCGACACCCTATACTTGTGGATGTCAAGCTATGCCGGCAATTTAAT‑CGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGCCGGGACTTTTTGTGGCGCCTTGTGTTCATTCCtt > 2:192465/1‑139 (MQ=255) cgcTCCGGAAAAAAATCAGCTGGCGCGACACCCTATACTTGTGGATGTCAAGCTATGCCGGCAATTTAAT‑CGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGCCGGGACTTTTTGAGGAGCCTTCTGTTCATTCCtt > 4:402914/1‑139 (MQ=255) cTCCGGAAAAAAATCAGCTGGCGCGACACCCTATTCTTGTGGATGTCAAGCTATGCCGGCAATTTAAT‑CGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCAGTTCATTcgattt > 1:373593/1‑134 (MQ=255) cTCCGGAAAAAAATCAGCTGGCGCGACACCCTATACTTGTGGATGTCAAGCTATGCCGGCAATTTAAT‑CGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGCCGGGACTTTTTGAGGAGCCTTATGTTCATTCCtatt > 5:370903/1‑139 (MQ=255) cTCCGGAAAAAAATCAGCTGGCGCGACACCCTATACTTGTGGATGTCAAGCTATGCCGGCAATTTAAT‑CGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCtttt > 4:346265/1‑139 (MQ=255) cTCCGGAAAAAAATCAGCTGGCGCGACACCCTATACTTGTGGATGTCAAGCTATGCCGGCAATTTAAT‑CGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCtttt > 6:79441/1‑139 (MQ=255) cggaaaaaaaTCAGCTGGCGCGACACCCTATACTTGTGGATGTCAAGCTATGCCGGCAATTTAAT‑CGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGACGGCACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGa > 8:260036/4‑139 (MQ=255) ggaaaaaatTCCGCTGGCGCGACACCGTATCCTTGTGGATGGCAAGCTATGCCGGCAATTTAAT‑CGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGAt < 2:373593/137‑1 (MQ=255) ggaaaaaaaTCAGCTGGCGCGACACCCTATACTTGTGGATGTCAAGCTATGCCGGCAATTTAAT‑CGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGAt < 4:92911/137‑1 (MQ=255) ggaaaaaaaTCAGCTGGCGCGACACCATTTAGTTGTGGATGTCAAGCTATGCCGGCAATTTAAT‑CGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGAt < 3:137213/137‑1 (MQ=255) ggaaaaaaaTCAGCTGGAGCGACACCCTATACTTGTGGATGTCAAGCTATGCCGGCAATTTAAT‑CGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGAt < 3:5076/137‑1 (MQ=255) aaaaaaTCAGCTGGCGCGACACCCTATACTTGTGGATGTCAAGCTATGCCGGCAATTTAAT‑CGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCa < 2:292732/139‑1 (MQ=255) cagCTGGCGCGACACCCTATACTTGTGGATGTCAAGCTATGCCGGCAATTTAAT‑CGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCa < 1:192465/137‑1 (MQ=255) agCTGGCGCGACACCCTATACTTGTGGATGTCAAGCTATGCCGGCAATTTAAT‑CGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCa < 3:346265/137‑1 (MQ=255) gCTGGCGCGACACCCTATACTTGTGGATGTCAAGCTATGCCTGCAATTTAAT‑CGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCaga < 1:120658/139‑1 (MQ=255) ggCGCGACACCCTATACTTGTGGATGTCAAGCTATGCCGGCAATTTAAG‑CGGCGCCATTCTGTTTGCCATCCTGATCCGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGca < 7:147077/139‑1 (MQ=255) gcgcGACACCCTATACTTGGGGATGTCAAGCTATGCCGGCAATTTAAT‑CGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGACGGGACTTTTTGAGGATCCTTCGGTTCATTCCTTTTTGATTCATTTGGCAGAGca < 7:72420/138‑1 (MQ=255) tatACTTGTGGATGTCAAGCTATGCCGGCAATTTAAT‑CGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGCGCACAAAATGGAgcc > 4:220169/3‑139 (MQ=255) tatACTTGTGGATGTCAAGCTATGCCGGCAATTTAAT‑CGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTAATTCCTTTTTGATTCTTTTTGCAGAGCACAAAATGGAgcc > 7:265031/3‑139 (MQ=255) gtgGATGTCAAGCTATGCCGGCAATTTAAT‑CGGCGCCATTCTGTTTGCCATCCTGATCCGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCt > 4:108929/1‑139 (MQ=255) gtgGATGTCAAGCTATGCCGGCAATTTAAT‑CGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCa > 1:56965/1‑115 (MQ=255) gtgGATGTCAAGCTATGCCGGCAATTTAAT‑CGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCa < 2:56965/115‑1 (MQ=255) gtgGATGTCAAGCTATGCCGGCAATTTAAT‑CGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACaaa < 5:401612/124‑1 (MQ=255) gtgGATGTCAAGCTATGCCGGCAATTTAAT‑CGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACACAATGGAGCCGCCGGCt > 6:291643/1‑139 (MQ=255) gtgGATGTCAAGCTATGCCGGCAATTTAAT‑CGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCt > 2:36403/1‑139 (MQ=255) gtgGATGTCAAGCTATGCCGGCAATTTAAT‑CGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTAATTTTTCAGAGCACAAAATGGAgccgccgggt > 4:267704/1‑135 (MQ=255) tgGATGTCAAGCTATGCCGGCAATTTAAT‑CGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGACGTGACTTTTTGAGGAGACTTCTGTTGATTCCTTTTTGATTAATTTGGCAGAGCACAAAATGGAGCAGCCGGCtt > 5:307751/1‑139 (MQ=255) tgGATGTCAAGCTATGCCGGCAATTTAAT‑CGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGccgccggcgt > 3:3181/1‑137 (MQ=255) tgGATGTCAAGCTATGCCGGCAATTTAAT‑CGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCtt > 6:57042/1‑139 (MQ=255) tgGATGTCAAGCTATGCCGGCAATTTAAT‑CGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCtt > 8:273981/1‑139 (MQ=255) tgGATGTCAAGCTATGCCGGCAATTTAAT‑CGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCtt > 1:12154/1‑139 (MQ=255) tgGATGTCAAGCTATGCCGGCAATTTAAT‑CGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCtt > 1:6003/1‑139 (MQ=255) tgGATGTCAAGCTATGCCGGCAATTTAAT‑CGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCtt > 2:40897/1‑139 (MQ=255) tgGATGTCAAGCTATGCCGGCAATTTAAT‑CGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCtt > 3:201565/1‑139 (MQ=255) tgGATGTCAAGCTATGCCGGCAATTTAAT‑CGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTACTTGCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCtt > 1:6813/1‑139 (MQ=255) tgGATGTCAAGCTATGCCGGCAATTTAAT‑CGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGGTCATTGCTTTTTGATTCATTTGGCAGCTCAAAAAATGGGgccgccggggt > 5:50417/1‑134 (MQ=255) tgGATGTCAAGCTATGCCGGCAATTTAAT‑CGGCGCCATTCTGTTTGCCATCCTGATCAGCGCAACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGCCAGAGCACAAAATGGAGccgccggcgt > 1:239930/1‑137 (MQ=255) gATGTCAAGCTATGCCGGCAATTTAAT‑CGGCGCGTTTCTGTTTGCCATCCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTGGGTTGATTCGGGTTTTATTGATTTGGCTGAGCACAAAATGGGCccgcgcgcgtgc > 4:51795/1‑135 (MQ=255) gATGTCAAGCTATGCCGGCAATTTAAT‑CGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCa < 4:300356/112‑1 (MQ=255) gATGTCAAGCTATGCCGGCAATTTAAT‑CGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTcc > 4:120233/1‑139 (MQ=255) ttgccAAGCTAGGCC‑GCAAATTAATGCGGCGCCATTCTGTTTGCCTTCCTGATCCGCGCGCCGGGACTTTTTGCGGAGCCTTCTGTTCATTCCTTTTTGTTTCATTTGCCAGAGCAAAAAATGGAGCCGCCGGCTTCCg < 4:233213/135‑1 (MQ=255) tGTCAAGCTATGCCGGCAATTTAAT‑CGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAgccgccgg > 4:172122/1‑130 (MQ=255) tGTCAAGCTATGCCGGCAATTTAAT‑CGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCg > 2:59347/1‑138 (MQ=255) tGTCAAGCTATGCCGGCAATTTAAT‑CGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGACCGGACTTTTTGAGGAGCCTTCGGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATTGAGccgccggcgtacg > 3:233213/1‑133 (MQ=255) tGTCAAGCTATGCCGGCAATTTAAT‑CGGCGCCATTCTGTTTGCCATCCTGATAACCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTAATTTTTAATAGCACAAAATGTATCCGCCGGCGTcag > 3:174473/1‑136 (MQ=255) gTCAAGCTATGCCGGCAATTTAAT‑CGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGaa > 8:207548/1‑139 (MQ=255) tCAAGCTATGCCGGCAATTTAAT‑CGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCCTTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGaa < 3:402914/138‑1 (MQ=255) cAAGCTATGCCGGCAATTTAAT‑CGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTAATTCCGTTTTTATTCCTTTGGCAGAGCCCAAACTGTAGCCGCCGGCGTCCGaatt > 8:158609/1‑137 (MQ=255) tGCCGGCAATTTAAT‑CGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGttttt > 4:403101/1‑138 (MQ=255) tGCCGGCAATTTAAT‑CGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGttttt < 1:36403/138‑1 (MQ=255) gCCGGCAATTTAAT‑CGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCGTTCCTTTTTGATTAATTTTGCAGAGCACAAAATGGATCCGCCGGCGTGCGAATTGtttttg > 2:156246/1‑137 (MQ=255) gCCGGCAATTTAAT‑CGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCa > 4:395049/1‑139 (MQ=255) ccGGCAATTTAAT‑CGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCa < 7:100980/138‑1 (MQ=255) gCAATTTAAT‑CGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTg > 7:121947/1‑128 (MQ=255) gCAATTTAAT‑CGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTg < 8:121947/128‑1 (MQ=255) tttAAT‑CGGCGCCATTCTGTTTGCCATCCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATg < 7:163554/139‑1 (MQ=255) aT‑CGGCGCCATTCTGTTTGCCATCCTGATCTGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCtg < 5:279076/138‑1 (MQ=255) ggCGCCATTCTGTTTGCCATCCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCa < 5:79441/139‑1 (MQ=255) gcgcCATTCTGTTTGCCATCCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCaa < 4:193032/139‑1 (MQ=255) aTTCTGTTTGCCATCCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGc < 3:392667/139‑1 (MQ=255) ttttCCATCCTGATCAGCGCGACGGGACTTTTTGAGTAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTtg < 7:265227/136‑1 (MQ=255) tttGCCCTCCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGGTTGATTTGGCAGAGCCCAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTtgtgt > 1:289528/1‑139 (MQ=255) tttGCCATCCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCTTTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTtgt < 1:156246/137‑1 (MQ=255) tttGCCATCCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTtgtgt > 5:142919/1‑139 (MQ=255) gCCATCCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGcc > 3:318525/1‑139 (MQ=255) ccATCCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGcc < 8:142533/138‑1 (MQ=255) cATCCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGATTTTCAGAGGAATTCTGTGCAATTAGCTTTTGTGCCTc > 6:208727/1‑139 (MQ=255) tccTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGc < 3:395049/137‑1 (MQ=255) ccTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGcc > 5:114160/2‑139 (MQ=255) cTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGcc < 3:403101/138‑1 (MQ=255) aTCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGAt < 7:108531/50‑1 (MQ=255) aTCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGAt > 8:108531/1‑50 (MQ=255) aTCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTTGCTTGTTTGCCTAGCCtttt > 2:315792/1‑139 (MQ=255) aTCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGCCtttt > 4:365581/1‑139 (MQ=255) cgcgACGGGACTTTTTGAGGAGCCTTCTTTTCATTCCTTTTTGATTCATTTGTCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGCCTTTTTCAt > 4:269391/1‑138 (MQ=255) cgcgACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGttttt > 6:158755/1‑93 (MQ=255) cgcgACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGCCTTTTTCAtt > 1:215502/1‑139 (MQ=255) cgcgACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGCCTTTTTCAt > 5:188411/1‑138 (MQ=255) cgcgACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGCCTTCCCAATTGTTTTTCATAGGAAAGCTGTGCAATTGGCTTTTGTGCCTCGCCTTATTCAtt > 5:110730/1‑139 (MQ=255) cgcgACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTGTTTGATTCATTTTGCCGAGCACAAAATGGAGCCGCCGGCTTCCGAATTTTTTTTCAGAGGGATTCTGTGAACTTGGCTTGTGTGCCTCGGCTTTTTCAtt > 6:311638/1‑139 (MQ=255) gACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGCCTTTTTCATTCCa < 4:96005/139‑1 (MQ=255) cgggacTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCtgtg > 2:28365/6‑103 (MQ=255) cgggacTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCtgtg < 1:28365/98‑1 (MQ=255) cgggacTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCtg < 1:389410/96‑1 (MQ=255) cgggacTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCtg > 2:389410/6‑101 (MQ=255) cgggacTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGCCTTTTTCATTCCAAt < 7:273981/134‑1 (MQ=255) cgggacTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTAAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGCCTTTTTCATTCCAAt > 8:260167/6‑139 (MQ=255) gtacTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGCCTTTTTCATTCCAATGt < 6:142919/136‑1 (MQ=255) ggacTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGGTTGTGTGCCTCGCCTTTTTCATTCCAATGt < 2:8226/136‑1 (MQ=255) ttttAGTAGCCTTCTGTTCATTCCTTTTTGATTAATTTGGCAGAGAAAAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGCCCTTTTCATTCCAATGTctctc < 3:267704/138‑2 (MQ=255) tttGAGCAGCCTTCTGTTAATTCATTTTTGATTCATTTGGCAGAGCAAAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGCCTTTTTCATTCCAATGTctctc < 2:384346/138‑2 (MQ=255) ttGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGCCTTTTTCATTCCAATGTctctca < 6:114160/138‑3 (MQ=255) gaggagCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGCCTTTTTCATTCCAATGTCTCTCaaa < 4:201565/138‑1 (MQ=255) | TCACTTATACCGCGCTCCGAAAAAAAATTCGCTGGCGAGACACCCTGTACCTGTGGATGTCAAGCTATGCCGGCAATTTGAT‑CGGCGCCATTCTATTTGCCATTCTGATCAGCGCGACAGGGCTTTTTGAGGAGGCTTCTGTTCATTCCTTTTTGATTCATCTGGCAGAGCACAAAATGGAGCCGCCCGCTTCCGAACTGTTTTTCAGAGGGATGCTGTGCAATTGGCTTGTGTGCCTCGCCTTTTTCATTCCAATGTCTCTTAAA > CP006881/3723455‑3723720 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |