New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP006881	= 3617989	39 (0.770)	24 (0.470)	17/232	NT	37.2%	coding (203/960 nt)	U712_18650	putative transporter YwkB
	?	CP006881	3618570 =	42 (0.830)					coding (1401/1698 nt)	U712_18655	putative NAD‑dependent malic enzyme 2

ATAAATGCGAATGTCGGCTGTGCAGAGTTCAAAGAAAATACAGATGAGTTCGTTAAATCATACTTGAATATAAATCTGCAAACCAAAAGAATGATGATATAGAAACCAACAATCCCAATAATTAAAGAAATCATTAAAGGTACTTGTGATAAAAATTCACTTCTGGAAGTTGTCAAAATACCAGCGATAAAGTGAGCTGGAAGTGCGTATTTCGTTACTAACGTACTTACCCCTTTTGCCGACTTGGCATCATAACTTCCAAAATGTCCTG  >  CP006881/3617854‑3618124                                                                                                                                        |                                                                                                                                        aTAAATGCGAATGTCGGCTGTGCAGAGTTCAAAGAAAATACAGATGAGTTCGTTAAATCATACTTGAATATAAATCTGCAAACCAAAAGAATGATGATATAGAAACCAACAATCCCAATAATTAAAGAAATCATTAgtt                                                                                                                                      >  5:201181‑M1/1‑136 (MQ=255) aTAAATGCGAATGTCGGCTGTGCAGAGTTCAAAGAAAATACAGATGAGTTCGTTAAATCATACTTGAATAAAAATCTGCAAACCAAAAGAATGATGATATAGAAACCAACAATCCCAATAATTAAAGAAATCATTAAAg                                                                                                                                      >  1:192945/1‑139 (MQ=255)         gAATGTCGGCTGTGCAGAGTTCAAAGAAAATACAGATGAGTTCGTTAAATCTTACTTGAATATAAATCTGCAAACCAAAAGAATGATGATATAGAAACCAACAATCCCAATAATTAAAGAAATCATTAAAGGTACtt                                                                                                                                >  4:279148/1‑137 (MQ=255)         gAATGTCGGCTGTGCAGAGTTCAAAGAAAATACAGATGAGTTCGTTAAATCTTACTTGAATATAAATCTGCAAACCAAAAGAATGATGATATAGAAACCAACAATCCCAATAATTAAAGAAATCATTAAAGGTACtt                                                                                                                                >  4:275023/1‑137 (MQ=255)         gAATGTCGGCTGTGCAGAGTTCAAAGAAAATACAGATGAGTTCGTTAAATCTTACTTGAATATAAATCTGCAAACCAAAAGAATGATGATATAGAAACCAACAATCCCAATAATTAAAGAAATCATTAAAGGTACtt                                                                                                                                <  3:279148/137‑1 (MQ=255)         gAATGTCGGCTGTGCAGAGTTCAAAGAAAATACAGATGAGTTCGTTAAATCTTACTTGAATATAAATCTGCAAACCAAAAGAATGATGATATAGAAACCAACAATCCCAATAATTAAAGAAATCATTAAAGGTACtt                                                                                                                                <  3:275023/137‑1 (MQ=255)                 gCTGTGCAGAGTTCAAAGAAAATACAGATGAGTTCGTTAAATCATACTTGAATATAAATCTGCAAACCAAAAGAATGATGATATAGAAACCAACAATCCCAATAATTAAAGAAATCATTAgttgttagattgtccgatt                                                                                                                      <  6:260496‑M1/139‑20 (MQ=255)                 gCTGTGCAGAGTTCAAAGAAAATACAGATGAGTTCGTTAAATCATACTTGAATATAAATCTGCAAACCAAAAGAATGATGATATAGAAACCAACAATCCCAATAATTAAAGAAATCATTAAAGGTACTTGTGATaaaaa                                                                                                                      >  4:55131/1‑139 (MQ=255)                     tgCAGAGTTCAAAGAAAATACAGATGAGTTCGTTAAATCATACTTGAATATAAATCTGCAAACCAAAAGAATGATGATATAGAAACCAACAATCCCAATAATTAAAGAAATCATTAAAGGTACTTGTGATAAAAATTCa                                                                                                                  >  8:220222/1‑139 (MQ=255)                            ttCAAAGAAAATACAGATGAGTTCGTTAAATCATACTTGAATATAAATCTGCAAACCAAAAGAATGATGATATAGAAACCAACAATCCCAATAATTAAAGAAATCATTAgttgttagattgtccgatttcataaggaa                                                                                                            >  8:97172‑M1/1‑109 (MQ=255)                            ttCAAAGAAAATACAGATGAGTTCGTTAAATCATACTTGAATATAAATCTGCAAACCAAAAGAATGATGATATAGAAACCAACAATCCCAATAATTAAAGAAATCATTAgttgttagattgtccgatttcataagaaac                                                                                                           >  3:252969‑M1/1‑109 (MQ=255)                            ttCAAAGAAAATACAGATGAGTTCGTTAAATCATACTTGAATATAAATCTGCAAACCAAAAGAATGATGATATAGAAACCAACAATCCCAATAATTAAAGAAATCATTAAAGTTACTTGTGATAAAAATTCACTTCTg                                                                                                            >  7:268914/1‑138 (MQ=255)                            ttCAAAGAAAATACAGATGAGTTCGTTAAATCATACTTGAATATAAATCTGCAAACCAAAAGAATGATGATATAGAAACCAACAATCCCAATAATTAAAGAAATCATTAAAGGTACTTGTGATAAAAATTCACTTCTg                                                                                                            >  8:112108/1‑138 (MQ=255)                              cAAAGAAAATACAGATGAGTTCGTTAAATCATACTTGAATATAAATCTGCAAACCAAAAGAATGATGATATAGAAACCAACAATCCCAATAATTAAAGAAATCATTAgttgttagattgtccgatttcataaggaaca                                                                                                          <  7:97172‑M1/138‑32 (MQ=255)                              cAAAGAAAATACAGATGAGTTCGTTAAATCATACTTGAATATAAATCTGCAAACCAAAAGAATGATGATATAGAAACCAACAATCCCAATAATTAAAGAAATCATTAgttgttagattgtccgatttcataagaaaca                                                                                                          <  6:80359‑M1/138‑32 (MQ=255)                               aaaGAAAATACAGATGAGTTCGTTAAATCATACTTGAATATAAATCTGCAAACCAAAAGAATGATGATATAGAAACCAACAATCCCAATAATTAAAGAAATCATTAAAGGTACTTGTGATAAAAATTCACTTCTGGAAg                                                                                                        >  7:263855/1‑139 (MQ=255)                               aaaGAAAATACAGATGAGTTCGTTAAATCATACTTGAATATAAATCTGCAAACCAAAAGAATGATGATATAGAAACCAACAATCCCAATAATTAAAGAAATCATTAAAGGTACTTGTGATAAAAATTCACTTCTGGAAg                                                                                                        >  3:108431/1‑139 (MQ=255)                               aaaGAAAATACAGATGAGTTCGTTAAATCATACTTGAATATAAATCTGCAAACCAAAAGAATGATGATATAGAAACCAACAATCCCAATAATTAAAGAAATCATTAAAGGTACTTGTGATAAAAATTCACTTCTGGAAg                                                                                                        >  1:249466/1‑139 (MQ=255)                                aaGAAAATACAGATGAGTTCGTTAAATCATACTTGAATATAAATCTGCAAACCAAAAGAATGATGATATAGAAACCAACAATCCCAATAATTAAAGAAATCATTAgttgttagattgtccgatttcataagaaacaccg                                                                                                       <  7:219635‑M1/139‑35 (MQ=255)                                  gAAAATACTGATGAGTTCGTTAAATCTTACTTGAATATAAATCTGCAAACCAAAAGAATGATTATATAGAAACCAACAATCCCAATAATTAAAGAAATCATTAgttgttagattgtccgatttcataagaaacaccgtt                                                                                                     <  8:148472‑M1/139‑37 (MQ=255)                                  gAAAATACAGATGAGTTCGTTAAATCATACTTGAATATAAATCTGCAAACCAAAAGAATGATGATATAGAAACCAACAATCCCAATAATTAAAGAAATCATTAgttgttagattgtccgatttcataagaaacaccgtt                                                                                                     <  3:279936‑M1/139‑37 (MQ=255)                                      aTACAGATGAGTTCGTTAAATCATACTTGAATATAAATCTGCAAACCAAAAGAATGATGATATAGAAACCAACAATCCCAATAATTAAAGAAATCATTAgttgttagattgtccgatttcataagaaacaccgttgtat                                                                                                 >  1:60679‑M1/1‑99 (MQ=255)                                      aTACAGATGAGTTCGTTAAATCATACTTGAATATAAATCTGCAAACCAAAAGAATGATGATATAGAAACCAACAATCCCAATAATTAAAGAAATCATTAgttgttagattgtccgatttcataagaaa                                                                                                            >  6:108446‑M1/1‑99 (MQ=255)                                      aTACAGATGAGTTCGTTAAATCATACTTGAATATAAATCTGCAAACCAAAAGAATGATGATATAGAAACCAACAATCCCAATAATTAAAGAAATCATTAgttgttagattgtccgatttcataagaaa                                                                                                            <  5:108446‑M1/128‑30 (MQ=255)                                      aTACAGATGAGTTCGTTAAATCATACTTGAATATAAATCTGCAAACCAAAAGAATGATGATATAGAAACCAACAATCCCAATAATTAAAGAAATCATTAAAGGTACTTGTGATAAAAATTCACTTCTGGAAGTTGTCa                                                                                                  >  1:16722/1‑138 (MQ=255)                                       tACAGATGAGTTCGTTAAATCATACTTGAATATAAATCTGCAAACCAAAAGAATGATGATATAGAAACCAACAATCCCAATAATTAAAGAAATCATTAgttgttagattgtccgatttcataagaaacaccgttgtatt                                                                                                <  6:201181‑M1/139‑42 (MQ=255)                                           gATGAGTTCGTTAAATCATACTTGAATATAAATCTGCAAACCAAAAGAATGATGATATAGAAACCAACAATCCCAATAATTAAAGAAATCATTAgttgttagattgtccgatttcataagaaacaccgttgtatt                                                                                                >  8:138685‑M1/1‑94 (MQ=255)                                           gATGAGTTCGTTAAATCATACTTGAATATAAATCTGCAAACCAAAAGAATGATGATATAGAAACCAACAATCCCAATAATTAAAGAAATCATTAgttgttagattgtccgatttcataagaaacaccgttgtatt                                                                                                <  7:138685‑M1/135‑42 (MQ=255)                                           gATGAGTTCGTTAAATCATACTTGAATATAAATCTGCAAACCAAAAGAATGATGATATAGAAACCAACAATCCCAATAATTAAAGAAATCATTAAAGGTACTTGTGATAAAAATTCACTTCTGGAAGTTGTCAAAATAc                                                                                            <  2:16722/139‑1 (MQ=255)                                                 ttCGTTAAATCATACTTGAATATAAATCTGCAAACCAAAAGAATGATGATATAGAAACCAACAATCCCAATAATTAAAGAAATCATTAAAGGTACTTGTGATAAAAATTCACTTCTGGAAGTTGTCAAAATACCAGCg                                                                                       >  3:177641/1‑138 (MQ=255)                                                 ttCGTTAAATCATACTTGAATATAAATATGCAAACCAAAAGAATGATGATATAGAAACCAACAATCCCAATAATTAAAGAAATCATTAgttgttagattgtccgatttcataagaaacaccgttgtattctacattgt                                                                                       >  5:234272‑M1/1‑88 (MQ=255)                                                           cATACTTGAATATAAATCTGCAAACCAAAAGAATGATGATATAGAAACCAACAATCCCAATAATTAAAGAAATCATTAAAGGTACTTGTGATAAAAATTCACTTCTGGAAGTTGTCAAAATACCAGCGATAAAGTGAGc                                                                            <  7:112108/139‑1 (MQ=255)                                                               cTTGAATATAAATCTGCAAACCAAAAGAATGATGATATAGAAACCAACAATCCCAATAATTAAAGAAATCATTAAAGGTACTTGTGATAAAAATTCACTTCTGGAAGTTGTCAAAATACCAGCGATAAAGTGAGCTGGa                                                                        <  6:41528/139‑1 (MQ=255)                                                                ttGAATATAAATCTGCATAACAAATGAATTATGATCTATAAACCAAAAATGCCTATAATTAAATAAATCATTAAAGGTAATTGTGATAAAAATTCACTTCTCGAAGTTCTAAAAATACCAGCGATAAAGTGAGCTGGa                                                                        <  2:45751/138‑1 (MQ=255)                                                                ttGAATATAAATCTGCAAACCAAAAGAATGATGATATAGAAACCAACAATCCCAATAATTAAAGAAATCATTAAAGTTACTTGTGATAAAAATTCACTTCTGGAAGTTGTCAAAATACCAGCGATAAAGTGAGCTGGaa                                                                       <  8:268914/139‑1 (MQ=255)                                                                  gAATATAAATCTGCATACCAAAAGAATGATGATATAGAAACCAACAATCCCAATAATTAAAGAAATCATTAgttgttagattgtccgatttcataagaaacaccgttgtattctacattgtcaaatgggcttcctgtt                                                                      <  6:234272‑M1/138‑68 (MQ=255)                                                                  gAATATAAATCTGCAAACCAAAAGAATGATGATATAGAAACCAACAATCCCAATAATTAAAGAAATCATTAAAGGTACTTGTGATAAAAATTCACTTCTGGAAGTTGTCAAAATACCAGCGATAAAGTGAGCTGGAAGt                                                                     >  5:127434/1‑139 (MQ=255)                                                                             tGCAAACCAAAAGAATGATGATATAGAAACCAACAATCCCAATAATTAAAGAAATCATTAAAGGTACTTGTGATAAAAATTCACTTCTGGAAGTTGTCAAAATACCAGCGATAAAGTGAGCTGGAAGTGCGTATTTCGt                                                          >  1:233658/1‑139 (MQ=255)                                                                              gCAAACCAAAAGAATGATGATATAGAAACCAACAATCCCAATAATTAAAGAAATCATTAAAGGTACTTGTGATAAAAATTCACTTCTGGAAGTTGTCAAAATACCAGCGATAAAGTGAGCTGGAAGTGCGTATTTCGt                                                          >  1:274263/1‑138 (MQ=255)                                                                               caaacaaaAAGAATGATGATATAGAAACCAACAATCCCAATAATTAAAGAAATCATTAAAGGTACTTGTGATAAAAATTCACTTCTGGAAGTTGTCAAAATACCAGCGATAAAGTGAGCTGGAAGTGCGTATTTcct                                                          <  3:5773/137‑3 (MQ=255)                                                                               cAAACCAAAAGAATGATGATATAGAAACCAACAATCCCAATAATTAAAGAAATCATTAgttgttagattgtccgatttcataagaaacaccgttgtattctacattgtcaaatgggcttcctgttgcaataagcacttt                                                        >  7:255650‑M1/1‑58 (MQ=255)                                                                               cAAACCAAAAGAATGATGATATAGAAACCAACAATCCCAATAATTAAAGAAATCATTAgttgttagattgtccgatttcataagaaacaccgttgtattctacattgtcaaatgggcttcctgttgcaataagcacttt                                                        >  6:214023‑M1/1‑58 (MQ=255)                                                                               cAAACCAAAAGAATGATGATATAGAAACCAACAATCCCAATAATTAAAGAAATCATTAAAGGTACTTGTGATAAAAATTCACTTCTGGAAGTTGTCAAAATACCAGCGATAAAGTGAGCTGGAAGTGCGTATTTCGt                                                          <  2:274263/137‑1 (MQ=255)                                                                                   ccAAAAGAATTATGATATAGAAACCAACAATACCAATAATTAAATAAATCATTAAAGGTACTTGTGATAAAAATTCACTTCTGGAAGTTGTCAAAATACCAGCGATAAAGTGAGCTGGAAGTGCGTATTTCGTTACTaa                                                    <  6:217649/139‑1 (MQ=255)                                                                                      aaaGAATGATGATATAGAAACCAACAATCCCAATAATTAAAGAAATCATTAAAGGTACTTGTGATAAAAATTCACTTCTGGAAGTTGTCAAAATACCAGCGATAAAGTGAGCTGGAAGTGCGTATTTCGTTACTAACg                                                  >  2:2496/1‑138 (MQ=255)                                                                                       aaGAATGATGATATAGAAACCAACAATCCCAATAATTAAAGAAATCATTAgttgttagattgtccgatttcataagaaacaccgttgtattctacattgtcaaatgggcttcctgttgcaataagcacttttccgtcag                                                >  3:62589‑M1/1‑50 (MQ=255)                                                                                          aaTGATGATATAGAAACCAACAATCCCAATAATTAAAGAAATCATTAAAGGTACTTGTGATAAAAATTCACTTCTGGAAGTTGTCAAAATACCAGCGATAAAGTGAGCTGGAAGTGCGTATTTCGTTACTAACGTACtt                                             <  3:55131/139‑1 (MQ=255)                                                                                            tgatgaTATAGAAACCAACAATCCCAATAATTAAAGAAATCATTAAAGGTACTTGTGATAAAAATTCACTTCTGGAAGTTGTCAAAATACCAGCGATAAAGTGAGCTGGAAGTGCGTATTTCGTTa                                                        >  5:209243/1‑126 (MQ=255)                                                                                            tgatgaTATAGAAACCAACAATCCCAATAATTAAAGAAATCATTAAAGGTACTTGTGATAAAAATTCACTTCTGGAAGTTGTCAAAATACCAGCGATAAAGTGAGCTGGAAGTGCGTATTTCGTTa                                                        <  6:209243/126‑1 (MQ=255)                                                                                              atgatATAGAAACCAACAATCCCAATAATTAAAGAAATCATTAgttgttagattgtccgatttcataagaaacaccgttgtattctacattgtcaaatgggcttcctgttgcaataagcacttttccgtcagtccattt                                         >  8:238946‑M1/1‑43 (MQ=255)                                                                                              atgatATAGAAACCAACAATCCCAATAATTAAAGAAATCATTAAAGGTACTTGTGATAAAAATTCACTTCTGGAAGTTGTCAAAATAc                                                                                            >  7:246457/1‑88 (MQ=255)                                                                                              atgatATAGAAACCAACAATCCCAATAATTAAAGAAATCATTAAAGGTACTTGTGATAAAAATTCACTTCTGGAAGTTGTCAAAATAc                                                                                            <  8:246457/88‑1 (MQ=255)                                                                                              atgatATAGAAACCAACAATCCCAATAATTAAAGAAATCATTAAAGGTACTTGTGATAAAAATTCACTTCTGGAAGTTGTCAAAATACCAGCGATAAAGTGAGCTGGAAGTGCGTATTTCGTTACTAACGTACTTAccc                                         >  8:84025/1‑139 (MQ=255)                                                                                              atgatATAGAAACCAACAATCCCAATAATTAAAGAAATCATTAAAGGTACTTGTGATAAAAATTCACTTCTGGAAGTTGTCAAAATACCAGCGAGAAAGTGAGCTGGAAGTGCGTATTTCGTTACTAACGTACTTAccc                                         >  1:194276/1‑139 (MQ=255)                                                                                                   ataGAAACCAACAATCCCAATAATTAAAGAAATCATTAAAGGTACTTGTGATAAAAATTCACTTCTGGAAGTTGTCAAAATACCAGCGATAAAGTGAGCTGGAAGTGCGTATTTCGTTACTAACGTACTTACCCCtttt                                    <  1:216247/139‑1 (MQ=255)                                                                                                         aCCAACAATCCCAATAATTAAAGAAATCATTAAAGGTACTTGTGATAAAAATTCACTTCTGGAAGTTGTCAAAATACCAGCGATAAAGTGAGCTGGAAGTGCGTATTTCGTTACTAACGTACTTACCCCTTTTGCCGAc                              >  1:183644/1‑139 (MQ=255)                                                                                                              caaTCCCAATAATTAAAGAAATCATTAAAGGTACTTGTGATAAAAATTCACTTCTGGAAGTTGTCAAAATACCACCGATAAAGTGAGCTGGAAGTGCGTATTTCGTTACTAACGTACTTACCCCTTTTGCCGACTTgg                          >  5:210506/1‑138 (MQ=255)                                                                                                               aaTACCAATAATTAAAGAAATCATTAgttgttagattgtccgatttcataagaaacaccgttgtattctacattgtcaaatgggcttcctgttgcaataagcacttttccgtcagtccatttgaacagatcttcaggaa                        <  1:241923‑M1/139‑114 (MQ=255)                                                                                                                 tCCCAATAATTAAAGAAATCATTAAAGGTACTTGTGATAAAAATTCACTTCTTGAAGTTGTCAAAATACAAGCGATAAAGTGAGCTGGAAGTGCGTATTTCGATACTAACGTACTTACAACTTTTGCCGACTTGGcat                       >  4:194394/1‑138 (MQ=255)                                                                                                                   ccAATAATTAAAGAAATCATTAAAGGTACTTGTGATAAAAATTCACTTCTGGAAGTTGTCAAAATACCAGCGATAAAGTGAGCTGGAAGTGCGTATTTCGTTACTAACGTACTTACCCCTTTTGCCGACTTGGcatcat                    <  6:255230/139‑1 (MQ=255)                                                                                                                      ataatTAAAGAAATCATTAgttgttagattgtccgatttcataagaaacaccgttgtattctacattgtcaaatgggcttcctgttgcaataagcacttttccgtcagtccatttgaacagatcttcaggaacagctt                  >  1:23895‑M1/1‑19 (MQ=255)                                                                                                                      ataatTAAAGAAATCATTAgttgttagattgtccgatttcataagaaacaccgttgtattctacattgtcaaatggccttcctgttgcaataagcacttttccgtcagtccatttgaacagaacttcagtaacagctt                  >  2:41726‑M1/1‑19 (MQ=255)                                                                                                                      ataatTAAAGAAATCATTAAAGGTACTTGTGATAAAAATTCACTTCTGGAAGTTGTCAAAATACCAGCGATAAAGTGAGCTGGAAGTGCGTATTTCGTTACTACCGTACTTCCCCCTGTTGCCGACTTGGCATCATAAc                 >  4:158818/1‑139 (MQ=255)                                                                                                                                 aaTCATTAgttgttagattgtccgatttcataagaaacaccgttgtattctacattgtcaaatgggcttcctgttgcaataagcacttttccgtcagtccatttgaacagatcttcaggaacagcttcagcaaggtgag      <  4:62589‑M1/139‑132 (MQ=255)                                                                                                                                  aTCATTAAAGGTACTTGTGATAAAAATTCACTTCTGGAAGTTGTCAAAATACCAGCGATAAAGTGAGCTGGAAGTGCGTATTTCGTTACTAACGTACTTACCCCTTTTGCCGACTTGGCATCATAACTTCCAAAATGTc     >  6:115795/1‑139 (MQ=255)                                                                                                                                     aTTAAAGGTACTTGTGATAAAAATTCACTTCTGGAAGTTGTCAAAATACCAGCGATAAAGTGAGCTGGAAGTGCGTATTTCGTTACTAACGTACTTACCCCTTTTGCCGACTTGGCATCATAACTTCCAAAATGTCCTg  <  8:263855/139‑1 (MQ=255)                                                                                                                                        |                                                                                                                                        ATAAATGCGAATGTCGGCTGTGCAGAGTTCAAAGAAAATACAGATGAGTTCGTTAAATCATACTTGAATATAAATCTGCAAACCAAAAGAATGATGATATAGAAACCAACAATCCCAATAATTAAAGAAATCATTAAAGGTACTTGTGATAAAAATTCACTTCTGGAAGTTGTCAAAATACCAGCGATAAAGTGAGCTGGAAGTGCGTATTTCGTTACTAACGTACTTACCCCTTTTGCCGACTTGGCATCATAACTTCCAAAATGTCCTG  >  CP006881/3617854‑3618124

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.