| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP006881 | 2,743,320 | G→C | 5.5% | P56P (CCC→CCG) | U712_14140 ← | putative transmembrane protein yshB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 2,743,320 | 0 | G | C | 5.5% | 252.5 / 4.8 | 73 | P56P (CCC→CCG) | U712_14140 | putative transmembrane protein yshB |
| Reads supporting (aligned to +/- strand): ref base G (37/32); new base C (2/2); total (39/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.65e-01 | |||||||||||
AGGAACGAGCCGATGATTCTCAGTAAGATTTTAGCAATGATAAATAAAACGATAAACGCAATCGCATTATAGTACGCTGCTTCCAAATTCCCCGTAAAAAAAGAAAGAGCCGGCTGTCCCGCTGAAAAATCGGGTGCGGGAATCCAATGTAAATGCGGTGCCACGTTTTTATAGAATAAAGCCGCAAAGGCAATTGATAAAATAAAGCTCGTCAAGCGGATAAACTGCAGGATAAAACCGCGTTTTAACCCCAGTAAAGTCCCCATC > CP006881/2743189‑2743455 | aGGAACGAGCCGATGATTCTCAGTAAGATTTTAGCAATGATAAATAAAACGTTAAACGCAATCGCATTATAGTACGCTGCTTCCAAATTCCCCGTAAAAAAAGAAAGAGCCGGCTGTCCCGCTGAAAAATCGGGTGCgg > 2:163780/1‑139 (MQ=255)aGGAACGAGCCGATGATTCTCAGTAAGATTTTAGCAATGATAAATAAAACGATAAACGCAATCGCATTATAGTACGCTGCTTCCAAATTCCCCGTAAAAAAAGAAAGAGCCGGCTGTCCCGCTGAAAAATCgggctgtc > 5:28681/1‑134 (MQ=255)aGGAACGAGCCGATGATTCTCAGTAAGATTTTAGCAATGATAAATAAAACGATAAACGCAATCGCATTATAGTACGCTGCTTCCAAATTCCCCGTAAAAAAAGAAAGAGCCGGCTGTCCCGCTGAAAAATCGGGTGCgg > 6:285899/1‑139 (MQ=255)aGGAACGAGCCGATGATTCTCAGTAAGATTTTAGCAATGATAAATAAAACGATAAACGCAATCGCATTATAGTACGCTGCTTCCAAATTCCCCGTAAAAAAAGAAAGAGCCGGCTGTCCAGCTGAAAAATCGGGTGCgg > 3:169174/1‑139 (MQ=255) cgcgCCGATGATTCTTAGTAAGTTTTTAGCATTTTTAAATAAAACGATAAACGCAATCGCATTATAGTACGCTGCTTCCAAATTCCCCGCAAAAAAAGAAAGAGCCGGCTGTCCCGCTTAAAAATCGGGTGCGGGAATc < 8:147099/136‑1 (MQ=255) cGAGCCGATGATTCTCAGTAAGATTTTAGCAATGATAAATAAAACGATAAACGCAATCGCATTATAGTACGCTGCTTCCAAATTCCCCGTAAAAAAAGAAAGAGCCGGCTGTCCCGCTGAAAAATCGGGTGCGGGAATc > 4:186774/1‑139 (MQ=255) cGAGCCGATGATTCTCAGTAAGATTTTAGCAATGATAAATAAAACGATAAACGCAATCGCATTATAGTACGCTGCTTCCAAATTCCCCGTAAAAAAAGAAAGAGCCGGCTGTCCCGCTGAAAAATCGGGTGCGGGAATc < 6:62289/139‑1 (MQ=255) cGAGCCGATGATTCTCAGTAAGATTTTAGCAATGATAAATAAAACGATAAACGCAATCGCATTATAGTACGCTGCTTCCAAATTCCCCGTAAAAAAAGAAAGAGCCGGCTGTCCCGCTGAAAAATCGGGTGCGGGAATc < 5:285899/139‑1 (MQ=255) aGCCGATGATTCTCAGTAAGATTTTAGCAATGATAAATAAAACGATAAACGCAATCGCATTATAGTACGCTGCTTCCAAATTCCCCGTAAAAAAAGAAAGATCAGGCTGTCCCGCTGAAAAATCGGTTGCGGGAATcc > 4:153454/1‑138 (MQ=255) aGCCGATGATTCTCAGTAAGATTTTAGCAATGATAAATAAAACGATAAACGCAATCGCATTATAGTACGCTGCTTCCAAATTCCCCGTAAAAAAAGAAAGAGCCGGCTGTCCCGCTGAAAATTCGGGTGCGGGAATcc > 4:234987/1‑138 (MQ=255) aGCCGATGATTCTCAGTAAGATTTTAGCAATGATAAATAAAACGATAAACGCAATCGCATTATAGTACGCTGCTTCCAAATTCCCCGTAAAAAAAGAAAGAGCCGGCTGTCCCGCTGAAAAATCggg > 5:72407/1‑127 (MQ=255) aGCCGATGATTATCAGTAAGATTTTAGCAATGATAAATAAAACGATAAACGCAATCGCATTATAGTACGCTGCTTCCAAATTCCCCGTAAAAAAAGAAAGAGCCGGCTGTCCCGCTGAAAAATCggg < 6:72407/127‑1 (MQ=255) gCCGATGATTCTCAGTAAGATTTTAGCAATGATAAATAAAACGATAAACGCAATCGCATTATAGTACGCTGCTTCCAAATTGCCCGTAAAAAAAGAAAGAGCCGGCTGTCCCGCTGAAAAATCGGGTGCGGGAATCCaa > 1:53644/1‑139 (MQ=255) gATTTTAGCAATGATAAATAAAACGATAAACGCAATCGCATTATAGTACGCTGCTTCCAAATTCCCCGTAAAAAAAGAAAGAGCCGGCTGTCCCGCTGAAAAATCGGGTGCGGGAATCCAATGTAAATGCGGTGCCACg > 5:130898/1‑139 (MQ=255) tAGCAATGATAAATAAAACGATAAACGCAATCGCATTATAGTACGCTGCTTCCAATTTCCCCGTAAAAAAAGAAAGAGCCGGCTGTCCCGCTGAAAAATCCGGTGCGGGAATCCAATGTAAATGCGGTGCCACGtttt > 5:265708/1‑138 (MQ=255) tAGCAATGATAAATAAAACGATAAACGCAATCGCATTATAGTACGCTGCTTCCAAATTCCCCGTAAAAAAAGAAAGAGCCGGCTGTCCCGCTGAAAAATCCGGTGCGGGAATCCAATGTAAATGCGGTGCCACGtttt > 5:269752/1‑138 (MQ=255) gCAATGATAAATAAAACGATAAACGCAATCGCATTATAGTACGCTGCTGCCAAATTCCCCGTAAAAAAAGAAAGAGCCGGCTGTCCCGCTGAAAAATCGGGTGCGGGAATCCAATGTAAATGCGGTGCCACGTTTTta < 3:54976/138‑1 (MQ=255) tGATAAATAAAACGATAAACGCAATCGCATTATAGTACGCTGCTTCCAAATTCCCCGTAAAAAAAGAAAGAGCCGGCTGTCCCGCTGAAAAATCGGGTGCGGGAATCCAATGTAAATGCGGTGCCAGGTTTTTATAGaa > 1:280905/1‑139 (MQ=255) tGATAAATAAAACGATAAACGCAATCGCATTATAGTACGCTGCTTCCAAATTCCACGTAAAAAAAGAAAGAGCCGGCTGTCCCGCTGAAAAATCGGGTGCGGGAATCCAATGTAAATGCGGTGCCACGTTTTTATAGaa > 4:219336/1‑139 (MQ=255) cataaataaAACCAAAAACGCAATCGCATTATAGTACGCTGCTTCCAAATTCCCCGAAAAAAACCAAAGAGCCGGCTGTCCCGCTGAAAAATCGGGTGCGGGAATCCAATGTAAATGCGGTGCCACGTTTTTATAGAAt < 3:186774/138‑1 (MQ=255) ataaataaAACGATAAACGCCATCGCATTATAGTACTCGGCTGCCAAATTCCCCGTAAACAAACAAAGAGCCGGCTGTCCCGCTGAAAAATCGGGTGCGGGAATCCAATGTAAATGCGGTGCCACGTTTTTATAGAATa < 3:234987/139‑1 (MQ=255) cGATAAACGCAATCGCATTATAGTACGCTGCTTCCAAATTCCCCGTAAAAAAAGAAAGAGCCGGCTGTCCCGCTGAAAAATCGGGTGCGGGAATCCAATGTAAATGCGGTGCCACGTTTTta < 7:190732/122‑1 (MQ=255) cGATAAACGCAATCGCATTATAGTACGCTGCTTCCAAATTCCCCGTAAAAAAAGAAAGAGCCGGCTGTCCCGCTGAAAAATCGGGTGCGGGAATCCAATGTAAATGCGGTGCCACGTTTTta > 8:190732/1‑122 (MQ=255) cGATAAACGCAATCGCATTATAGTACGCTGCTTCCAAATTCCCCGTAAAAAAAGAAAGAGCCGGCTGTCCCGCTGAAAAATCGGGTGCGGGAATCCAATGTAAATGCGGTGCCACGTTTTta > 6:123888/1‑122 (MQ=255) cGATAAACGCAATCGCATTATAGTACGCTGCTTCCAAATTCCCCGTAAAAAAAGAAAGAGCCGGCTGTCCCGCTGAAAAATCGGGTGCGGGAATCCAATGTAAATGCGGTGCCACGTTTTta < 5:123888/122‑1 (MQ=255) aaaCGCAATCGCATTATAGTACGCTGCTTCCAAATTCCCCGTAAAAAAAGAAAGAGCCGGCTGTCCCGCTGAAAAATCGGGTGCGGGAATCCAATGTAAATGCGGTGCCACGTTTTTATAGAATAAAGCCGCAAAGGCa < 8:95497/139‑1 (MQ=255) aCGCAATCGCATTATAGTACGCTGCTTCCAAATTCCCCGTAAAAAAAGAAAGAGCCGGCTGTCCCGCTGAAAAATCGGGTGCGGGAATCCAATGTAAATGCGGTGCCACGTTTTTATAGAATAAAGCCGCAAAGGCAAt < 7:32660/139‑1 (MQ=255) aaTCGCATTATAGTACGCTGCTTCCAAATTCCCCGTAAAAAAAGAAAGAGCCGGCTGTCCCGCTGAAAAATCGGGTGCGGGAATCCAATGTAAATGCGGTGCCACGTTTTTATAGAATAAAGCCGCAAAGGCAATTGat < 6:93974/139‑1 (MQ=255) aTCGCATTATAGTACGCTGCTTCCAAATTCCCCGTAAAAAAAGAAAGAGCCGGCTGTCCCGCTGAAAAATCGGGTGCGGGAATCCAATGTAAATGCGGTGCCACGTTTTTATAGAATAAAGCCGCAAAGGCAATTGat > 3:51062/1‑138 (MQ=255) cATTATAGTACGCTGCTTCCAAATTCCCCGAAAAAAAAGAAAGAGCCGGCTGTCCCGCTGAAAAATCGGGTGCGGGAATCCAATGTAAATGCGGTGCCACGTTTTTATAGAATAAAGCCGCAAAGGCAATTGataaaat < 8:137594/139‑1 (MQ=255) gTACGCTGCTTCCAAATTCCCCGTAAAAAAAGAAAGAGCCGGCTGTCCCGCTGAAAAATCGGGTGCGGGAATCCAATGTAAATGCGGTGCCACGTTTTTATAGAATAAAGCCGCAAAGGCAATTGATAAAATAAAGCTc > 7:34840/1‑139 (MQ=255) cGCTGCTTCCAAATTCCCCGTAAAAAAAGAAAGAGCCGGCTGTCCCGCTGAAAAATCGGGTGCGGGAATCCAATGTAAATGCGGTGCCACGTTTTTATAGAATAAAGCCGCAAAGGCAATTGATAAAATAAAGCTCGt > 3:257277/1‑138 (MQ=255) cGCTGCTTCCAAATTCCCCGTAAAAAAAGAAAGAGCCGGCTGTCCCGCTGAAAAATCGGGTGCGGGAATCCAATGTAAATGCGGTGCCACGTTTTTATAGAATAAAGCCGCAAAGGCAATTGATAAAATAAAGCTCGt > 4:241410/1‑138 (MQ=255) cGCTGCTTCCAAATTCCCCGTAAAAAAAGAAAGAGCCGGCTGTCCCGCTGAAAAATCGGGTGCGGGAATCCAATGTAAATGCGGTGCCACGTTTTTATAGAATAAAGCCGCAAAGGCAATTGATAAAATAAAGCTCGt > 7:33037/1‑138 (MQ=255) gctgctTCCAAATTCCCCGTAAAAAAAGAACGAGCCGGCTGTCCCGCTGAAAAATCGGGTGCGGGAATCCAATGTAAATGCGGTGCCACGTTTTTATAGAATAAAGCCGCAAAGGCAATTGATAAAATAAAGCTCGTCa < 4:51062/139‑1 (MQ=255) tgctTCCAAATTCCCCGTAAAAAAAGAAAGAGCCGGCTGTCCCGCTGAAAAATCGGGTGCGGGAATCCAATGTAAATGCGGTGCCACGTTTTTATAGAATAAAGCCGCAAAGGCAATTGATAAAATAAAGCTCGTCAAg > 2:120159/1‑139 (MQ=255) cgcccccAAATTCCCCGTAAAAAAACAAAGAGCCGGCTGTCCCGCTGAAAAATCGGGTGCGGGAATCCAATGTAAATGCGGTGCCACGTTTTTATAGAATAAAGCCGCAAAGGCAATTGATAAAATAAAGCTCGTCAAg < 1:140796/134‑1 (MQ=255) ctTCCAAATTCCCCGTAAAAAAAGAAAGAGCCGGCTGTCCCGCTGAAAAATCGGGTGCGGGAATCCAATGTAAATGCGGTGCCACGTTTTTATAGAATAAAGCCGCAAAGGCa < 5:122641/113‑1 (MQ=255) ctTCCAAATTCCCCGTAAAAAAAGAAAGAGCCGGCTGTCCCGCTGAAAAATCGGGTGCGGGAATCCAATGTAAATGCGGTGCCACGTTTTTATAGAATAAAGCCGCAAAGGCa > 6:122641/1‑113 (MQ=255) ctTCCAAATTCCCCGTAAAAAAAGAAAGAGCCGGCTGTCCCGCTGAAAAATCGGGTGCGGGAATCCAATGTAAATGCGGTGCCACGTTTTTATAGAATAAAGCCGCAAAGGCTATTGATAAAATAAAGCTCGTCAAGCg > 1:90827/1‑139 (MQ=255) ctTCCAAATTCCCCGTAAAAAAAGAAAGAGCCGGCTGTCCCGCTGAAAAATCGGGTGCGGGAATCCAATGTAAATGCGGTGCCACGTTTTTATAGAATAAAGCCGCAAAGGCAATTGATAAAATAAAGCTCGTCAAGCg > 8:86846/1‑139 (MQ=255) ctTCCAAATTCCCCGTAAAAAAAGAAAGAGCCGGCTGTCCCGCTGAAAAATCGGGTGCGGGAATCCAATGTAAATGCGGTGCCACGTTTTTATAGAATAAAGCCGCAAAGGCAATTGATAAAATAAAGCTCGTCAAGCg > 7:246278/1‑139 (MQ=255) ctTCCAAATTCCCCGTAAAAAAAGAAAGAGCCGGCTGTCCCGCTGAAAAATCGGGTGCGGGAATCCAATGTAAATGCGGTGCCACGTTTTTATAGAATAAAGCCGCAAAGGCAATTGATAAAATAAAGCTCGTCAAGCg > 3:254900/1‑139 (MQ=255) ctTCCAAATTCCCCGTAAAAAAAGAAAGAGCCGGCTGTCCCGCTGAAAAATCGGGTGCGGGAATCCAATGTAAATGCGGTGCCACGTTTTTATAGAATAAAGCCGCAAAGGCAATTGATAAAATAAAGCTCGTCAAGCg > 4:103920/1‑139 (MQ=255) ctTCCAAATTCCCCGTAAAAAAAGAAAGAGCCGGCTGTCCCGCTGAAAAATCGGGTGCGGGAATCCAATGTAAATGCGGTGCCACGTTTTTATAGAATAAAGCCGCAAAGGCAATTGATAAAATAAAGCTCGTCAAGCg > 6:62066/1‑139 (MQ=255) ctTCCAAATTCCCCGTAAAAAAAGAAAGAGCCGGCTGTCCCGCTGAAAAATCGGGTGCGGGAATCCAATGTAAATGCGGTGCCACGATTTTATAGAATAAAGCCGCAAAGGCAATAGATAAAATAAAGCTCGTCAAGCg > 3:227814/1‑139 (MQ=255) tCCAAATTCCCCGTAAAAAAAGAAAGAGCCGGCTGTCCCGCTGAAAAATCGGGTGCGGGAATCCAATGTAAATGCGGTGCCACGTTTTTATAGAATAAAGCCGCAAAGGCAATTGATAAAATAAAGCTCGTCAAGCGGa > 8:139520/1‑139 (MQ=255) ccAAATTCCCCGTAAAAAAAGAAAGAGCCGGCTGTCCCGCTGAAAAATCGGGTGCGGGAATCCAATGTAAATGCGGTGCCACGTTTTTATAGAATAAAGCCGCAAAGGCAATTGATAAAATAAAGCTCGTCAAGCGGa > 6:5133/1‑138 (MQ=255) ccAAATTCCCCGTAAAAAAACAAAGAGCCGGCTGTCCCGCTGAAAAATCGGGTGCGGGAATCCAATGTAAATGCGGTGCCACGTTTTTATAGAATAAAGCCGCAAAGGCAATTGATAAAATAAAGCTCGTCAAGCGGa < 3:103920/138‑1 (MQ=255) cAAATTCCCCGTAAAAAAAGAAAGAGCCGGCTGTCCCGCTGAAAAATCGGGTGCGGGAATCCAATGTAAATGCGGTGCCACGTTTTTATAGAATAAAGCCGCAAAGGCAATTGATAAAATAAAGCTCGTCAAGCGGATa < 8:34840/139‑1 (MQ=255) aaTTCCCCGTAAAAAAAGAAAGAGCCGGCTGTCCCGCTGAAAAATCGGGTGCGGGAATc > 4:219406/1‑59 (MQ=255) aaTTCCCCGTAAAAAAAGAAAGAGCCGGCTGTCCCGCTGAAAAATCGGGTGCGGGAATc < 3:219406/59‑1 (MQ=255) ccccGTAAAAAAAGAAAGAGCCGGCTGTCCCGCTGAAAAATCGGGTGCGGGAATCCAATGTAAATGCGGTGCCACGTTTTTATAGAATAAAGCCGCAAAGGCAATTGATAAAATAAAGCTCGTCAAGCGGATAAACTg > 8:260034/1‑138 (MQ=255) ccccGTAAAAAAAGAAAGAGCCGGCTGTCCCGCTGAAAAATCGGGTGCGGGAATCCAATGTAAATGCGGTGCCACGTTTTTATAGAATAAAGCCGCAAAGGCAATTGATAAAATAAAGCTCGTCAAGCGGATAAACTg > 7:125633/1‑138 (MQ=255) cccGTAAAAAAAGAAAGAGCCGGCTGTCCCGCTGAAAAATCCGGTGCGGGAATCCAATGTAAATGCGGTGCCACGTTTTTATAGAATAAAGCCGCAAAGGCAATTGATAAAATAAAGCTCGTCAAGCGGATAAACTGCa < 6:265708/139‑1 (MQ=255) cccGTAAAAAAAGAAAGAGCCGGCTGTCCCGCTGAAAAATCCGGTGCGGGAATCCAATGTAAATGCGGTGCCACGTTTTTATAGAATAAAGCCGCAAAGGCAATTGATAAAATAAAGCTCGTCAAGCGGATAAACTGCa < 6:269752/139‑1 (MQ=255) cGTAAAAAAAGAAAGAGCCGGCTGTCCCGCTGAAAAATCGGGTGCGGGAATCCAATGTAAATGCGGTGCCACGTTTTTATAGAATAAAGCCGCAAAGGCAATTGATAAAATAAAGCTCGTCAAGCGGATAAACTGCAg > 4:158502/1‑138 (MQ=255) aaaaGAAAGAGCCGGCTGTCCCGCTGAAAAATCGGGTGCGGGAATCCAATGTAAATGCGGTGCCACGTTTTTATAGAATAAAGCCGCAAAGGCAATTGa > 8:205417/1‑99 (MQ=255) aaaaGAAAGAGCCGGCTGTCCCGCTGAAAAATCGGGTGCGGGAATCCAATGTAAATGCGGTGCCACGTTTTTATAGAATAAAGCCGCAAAGGCAATTGa < 7:205417/99‑1 (MQ=255) aaccaagaGCCGGCTGTCCCGCTGAAAAATCGGGTGCGGGAATCCAATGTAAATGCGGTGCCACGTTTTTATAGAATAAAGCCGCAAAGGCAATTGATAAAATAAAGCTCGTCAAGCGGATAAACTGCAGGATAAAAcc < 4:233221/135‑1 (MQ=255) gaaagaGCCGGCTGTCCCGCTGAAAAATCGGGTGCGGGAATCCAATGTAAATGCGGTGCCACGTTTTTATAGAATAAAGCCGCAAAGGCAATTGATAAAATAAAGCTCGTCAAGCGGATAAACTGCAGGATAAAACcgc > 4:122774/1‑139 (MQ=255) agCCGGCTGTCCCGCTGAAAAATCGGGTGCGGGAATCCAATGTAAATGCGGTGCCACGTTTTTATAGAATAAAGCCGCAGAGGCAATTGATAAAATAAAGCTCGTCAAGCGGATAAACTGCAGGATAAAACCGCGtttt < 6:130898/139‑1 (MQ=255) acccGGCGGGCCCGCTGAAAAATCGGGGGCCGGAATCCAATGTAAATGCGGTGCCACGTTTTTATAGAATACAGCCGCAAAGGCAATTGATAAAATAAAGCTCGTCAAGCGGATAAACTGCAGGATAAAACCGCGtttt < 4:9970/137‑1 (MQ=255) ccGGCTGTCCCGCTGAAAAATCGGGTGCGGGAATCCAATGTAAATGCGGTGCCACGTTTTTATAGAATAAAGCCGCAAAGGCAATTGATAAAATAAAGCTCGTCAAGCGGATAAACTGCAGGATAAAACCGCGTTTTaa < 1:120159/139‑1 (MQ=255) gCTGTCCCGCTGAAAAATCGGGTGCGGGAATCCAATGTAAATGCGGTGCCACGTTTTTATAGAATAAAGCCGCAAAGGCAATTGATAAAATAAAGCTCGTCa < 6:140924/102‑1 (MQ=255) gCTGTCCCGCTGAAAAATCGGGTGCGGGAATCCAATGTAAATGCGGTGCCACGTTTTTATAGAATAAAGCCGCAAAGGCAATTGATAAAATAAAGCTCGTCa > 5:140924/1‑102 (MQ=255) gCTGTCCCGCTGAAAAATCGGGTGCGGGAATCCAATGTAAATGCGGTGCCACGTTTTTATAGAATAAAGCCGCAAAGGCAATTGATAAAATAAAGCTCGTCAAGCGGATAAACTGCAGGATAAAACCGCGTTTTAAccc < 7:86846/139‑1 (MQ=255) gCTGTCCCGCTGAAAAATCGGGTGCGGGAATCCAATGTAAATGCGGTGCCACGTTTTTATAGAATAAAGCCGCAAAGGCAATTGATAAAATAAAGCTCGTCAAGCGGATAAACTGCAGGATAAAACCGCGTTTTAAccc < 3:219336/139‑1 (MQ=255) cccGCTGAAAAATCGGGTGCGGGAATCCAATGTAAATGCGGTGCCACGTTTTTATAGAATAACGCCGCAAAGGCAATTGATAATATAAAGCTCGTCAAGCGGATAAACTGCAGGATAAAACCGCGTTTTAACCGCAGt > 3:118864/1‑138 (MQ=255) cccGCTGAAAAATCGGGTGCGGGAATCCAATGTAAATGCGGTGCCACGTTTTTATAGAATAAAGCCGCAAAGGCAATTGATAAAATAAAGCTCGTCAAGCGGATAAACTGCAGGATAAAACCGCGTTTTAACCCCAGTa < 4:254900/139‑1 (MQ=255) ccGCTGAAAAATCGGGTGCGGGAATCCAATGTAAATGCGGCGCCACGCTGTTATAGAATAAAGCCGCAAAGGCAATTGATAAATTAAAGCTCGTCAAGCGGATAAACTGCAGGATAAAACCGCGTTTTAACCCCAGTa < 8:158082/138‑1 (MQ=255) gCTGAAAAATCGGGTGCGGGAATCCAATGTAAATGCGGTGCCACGTTTTTATAGAATAAAGCCGCAAAGGCAATTGATAAAATAAAGCTCGTCAAGCGGATAAACTGCAGGATAAAACCGCGTTTTAACCCCAGTAAAg < 8:125633/139‑1 (MQ=255) gCTGAAAAATCGGGTGCGGGAATCCAATGTAAATGCGGTGCCACGTTTTTATAGAATAAAGCCGCAAAGGCAATTGATAAAATAAAGCTCGTCAAGCGGATAAACTGCAGGATAAAACCGCGTTTTAACCCCAGTAAAg < 4:66718/139‑1 (MQ=255) cTGAAAAATCGGGTGCGGGAATCCAATGTAAATGCGGTGCCACGTTTTTATAGAATAAAGCCGCAAAGGCAATTGATAAAATAAAGCTCGTCAAGCGGATAAACTGCAGGATAAAACCGCGTTTTAACCCCAGTAAAGt > 8:26817/1‑139 (MQ=255) aaaaaTCGGGTGCGGGAATCCAATGTAAATGCGGTGCCACGTTTTTATAGAATAAAGCCGCAAAGGCAATTGATAAAATAAAGCTCGTCAAGCGGATAAACTGCAGGATAAAACCGCGTTTTAACCCCAGTAAAGTc < 2:53644/137‑1 (MQ=255) aTCGGGTGCGGGAATCCAATGTAAATGCGGTGCCACGTTTTTATAGAATAAAGCCGCAAAGGCAATTGATAAAATAAAGCTCGTCAAGCGGATAAACTGCAGGATAAAACCGCGTTTTAACCCCAGTAAAGTCCCCATc < 1:163780/139‑1 (MQ=255) | AGGAACGAGCCGATGATTCTCAGTAAGATTTTAGCAATGATAAATAAAACGATAAACGCAATCGCATTATAGTACGCTGCTTCCAAATTCCCCGTAAAAAAAGAAAGAGCCGGCTGTCCCGCTGAAAAATCGGGTGCGGGAATCCAATGTAAATGCGGTGCCACGTTTTTATAGAATAAAGCCGCAAAGGCAATTGATAAAATAAAGCTCGTCAAGCGGATAAACTGCAGGATAAAACCGCGTTTTAACCCCAGTAAAGTCCCCATC > CP006881/2743189‑2743455 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |