Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	CP006881	3302034–3303312	3304612	1301–2579	36 [22]	[1] 104	[U712_16990]–[U712_16995]	[U712_16990],[U712_16995]

CCGTAGAAAGGGCTGTTTCATTAAAGCGTTTTCATTTTATCCAAAGCTTTTCAATTTCCTCGAGCGATTTGTTCTTCGTTTCTGGACAGATCGTAACGACAAACAGGAAACAAAGGATGTTAATCACCGCAAAGATCCAAAATGTATAGGCGAGCCCG  >  CP006881/3301895‑3302052                                                                                                                                           |                    ccGTAGAAAGGGCTGTTTCATTAAAGCGTTTTCATTTTATCCAAAGCTTTTCAATTTCCTCGAGCGATTTGTTCTTCGTTTCTGGACGGATCGTAACGACAAACAGGAAACAAAGGATGTTAATCACCGCAAAGATCCa                     <  2:114930/139‑1 (MQ=255) ccGTAGAAAGGGCTGTTTCATTAAAGCGTTTTCATTTTATCCAAAGCTTTTCAATTTCCTCGAGCGATTTGTTCTTCGTTTCTGGACAGATCGTTACGACAAACAGGAAACAAAGGATGTTAATCACCGCAAAGATCCa                     <  3:153500/139‑1 (MQ=255) ccGTAGAAAGGGCTGTTTCATTAAAGCGTTTTCATTTTATCCAAAGCTTTTCAATTTCCTCGAGCGATTTGTTCTTCGTTTCTGGACAGATCGTAACGACAAACAGGAAACAAAGGATGTTAATCACCGCAAAGATCCa                     <  1:207980/139‑1 (MQ=255) ccGTAGAAAGGGCTGTTTCATTAAAGCGTTTTCATTTTATCCAAAGCTTTTCAATTTCCTCGAGCGATTTGTTCTTCGTTTCTGGACAGATCGTAACGACAAACAGGAAACAAAGGATGTTAATCACCGCAAAGATCCa                     <  8:29391/139‑1 (MQ=255) ccGTAGAAAGGGCTGTTTCATTAAAGCGTTTTCATTTTATCCAAAGCTTTTCAATTTCCTCGAGCGATTTGTTCTTCGTTTCTGGACAGATCGTAACGACAAACAGGAAACAAAGGATGTTAATCACCGCAAAGATCCa                     <  5:406679/139‑1 (MQ=255) ccGTAGAAAGGGCTGTTTCATTAAAGCGTTTTCATTTTATCCAAAGCTTTTCAATTTCCTCGAGCGATTTGTTCTTCGTTTCTGGACAGATCGTAACGACAAACAGGAAACAAAGGATGTTAATCACCGCAAAGATCCa                     <  5:193776/139‑1 (MQ=255) ccGTAGAAAGGGCTGTTTCATTAAAGCGTTTTCATTTTATCCAAAGCTTTTCAATTTCCTCGAGCGATTTGTTCTTCGTTTCTGGACAGATCGTAACGACAAACAGGAAACAAAGGATGTTAATCACCGCAAAGATCCa                     <  4:412667/139‑1 (MQ=255) ccGTAGAAAGGGCTGTTTCATTAAAGCGTTTTCATTTTATCCAAAGCTTTTCAATTTCCTCGAGCGATTTGTTCTTCGTTTCTGGACAGATCGTAACGACAAACAGGAAACAAAGGATGTTAATCACCGCAAAGATCCa                     <  3:255577/139‑1 (MQ=255) ccGTAGAAAGGGCTGTTTCATTAAAGCGTTTTCATTTTATCCAAAGCTTTTCAATTTCCTCGAGCGATTTGTTCTTCGTTTCTGGACAGATCGTAACGACAAACAGGAAACAAAGGATGTTAATCACCGCAAAGATCCa                     <  3:111578/139‑1 (MQ=255) ccGTAGAAAGGGCTGTTTCATTAAAGCGTTTTCATTTTATCCAAAGCTTTTCAATTTCCTCGAGCGATTTGTTCTTCGTTTCTGGACAGATCGTAACGACAAACAGGAAACAAAGGATGTTAATCACCGCAAAGATCCa                     <  2:489593/139‑1 (MQ=255) ccGTAGAAAGGGCTGTTTCATTAAAGCGTTTTCATTTTATCCAAAGCTTTTCAATTTCCTCGAGCGATTTGTTCTTCGTTTCTGGACAGATCGTAACGACAAACAGGAAACAAAGGATGTTAATCACCGCAAAGATCCa                     <  1:80837/139‑1 (MQ=255) ccGTAGAAAGGGCTGTTTCATTAAAGCGTTTTCATTTTATCCAAAGCTTTTCAATTTCCTCGAGCGATTTGTTCTTCGTTTCTGGACAGATCGTAACGACAAACAGGAAACAAAGGATGTTAATCACCGCAAAGATCCa                     <  1:77660/139‑1 (MQ=255)   gTAGAAAGGGCTGTTTCATTAAAGCGTTTTCATTTTATCCAAAGCTTTTCAATTTCCTCGAGCGATTTGTTCTTCGTTTCTGGACAGATCGTAACGACAAACAGGAAACAAAGGATGTTAATCACCGCAAAGATCCaaa                   <  3:133223/139‑1 (MQ=255)   gTAGAAAGGGCTGTTTCATTAAAGCGTTTTCATTTTATCCAAAGCTTTTCAATTTCCTCGAGCGATTTGTTCTTCGTTTCTGGACAGATCGTAACGACAAACAGGAAACAAAGGATGTTAATCACCGCAAAGATCCaaa                   <  7:229474/139‑1 (MQ=255)   gTAGAAAGGGCTGTTTCATTAAAGCGTTTTCATTTTATCCAAAGCTTTTCAATTTCCTCGAGCGATTTGTTCTTCGTTTCTGGACAGATCGTAACGACAAACAGGAAACAAAGGATGTTAATCACCGCAAAGATCCaaa                   <  6:229504/139‑1 (MQ=255)   gTAGAAAGGGCTGTTTCATTAAAGCGTTTTCATTTTATCCAAAGCTTTTCAATTTCCTCGAGCGATTTGTTCTTCGTTTCTGGACAGATCGTAACGACAAACAGGAAACAAAGGATGTTAATCACCGCAAAGATCCaaa                   <  4:457097/139‑1 (MQ=255)   gTAGAAAGGGCTGTTTCATTAAAGCGTTTTCATTTTATCCAAAGCTTTTCAATTTCCTCGAGCGATTTGTTCTTCGTTTCTGGACAGATCGTAACGACAAACAGGAAACAAAGGATGTTAATCACCGCAAAGATCCaaa                   <  5:177858/139‑1 (MQ=255)   gTAGAAAGGGCTGTTTCATTAAAGCGTTTTCATTTTATCCAAAGCTTTTCAATTTCCTCGAGCGATTTGTTCTTCGTTTCTGGACAGATCGTAACGACAAACAGGAAACAAAGGATGTTAATCACCGCAAAGATCCaaa                   <  5:310738/139‑1 (MQ=255)   gTAGAAAGGGCTGTTTCATTAAAGCGTTTTCATTTTATCCAAAGCTTTTCAATTTCCTCGAGCGATTTGTTCTTCGTTTCAGGACAGATCGTAACGACAAACAGGAAACAAAGGATGTTAATCACCGCAAAGATCCaaa                   <  1:209460/139‑1 (MQ=255)     aGAAAGGGCTGTTTCATTAAAGCGTTTTCATTTTATCCAAAGCTTTTCAATTTCCTCGAGCGATTTGTTCTTCGTTTCTGGACAGATCGTAACGACAAACAGGAAACAAAGGATGTTAATCACCGCAAAGATCCaaa                   >  3:424971/1‑137 (MQ=255)     aGAAAGGGCTGTTTCATTAAAGCGTTTTCATTTTATCCAAAGCTTTTCAATTTCCTCGAGCGATTTGTTCTTCGTTTCTGGACAGATCGTAACGACAAACAGGAAACAAAGGATGTTAATCACCGCAAAGATCCaaa                   <  4:424971/137‑1 (MQ=255)        aaGGGCTGTTTAATAATAGCGTTTTCATTTTATCCAAATCTTTTCAATTTCCTCGATCGATTTGTTCTTCGTTTCTGGAAAGATCCTAACGAAAAACAGGAAACAAAGGATGTTAATCACCGCAAAGATCCAAAATGta              <  2:315849/139‑1 (MQ=14)          gggCTGTTTCATTAAAGCGTTTTCATTTTATCCAAAGCTTTTCAATTTCCTCGAGCGATTTGTTCTTCGTTTCTGGACAGATCGTAACGACAAACAGGAAACAAAGGATGTTAATCACCGCAAAGATCCAAAATGta              >  6:218068/1‑137 (MQ=255)           ggCTGTTTCATTAAAGCGTTTTCATTTTATCCAAAGCTTTTCAATTTCCTCGAGCGATTTGTTCTTCGTTTCTGGACAGATCGTAACGACAAACAGGAAACAAAGGATGTTAATCACCGCAAAGATCCAAAATGTATAg           >  2:411301/1‑139 (MQ=255)            gCTGTTTCATTAAAGCGTTTTCATTTTATCCAAAGCTTTTCAATTTCCTCGAGCGATTTGTTCTTCGTTTCTGGACAGATCGTAACGACAAACAGGAAACAAAGGATGTTAATCACCGCAAAGATCCAAAATGTATAgg          >  1:444942/1‑139 (MQ=255)            gCTGTTTCATTAAAGCGTTTTCATTTTATCCAAAGCTTTTCAATTTCCTCGAGCGATTTGTTCTTCGTTTCTGGACAGATCGTAACGACAAACAGGAAACAAAGGATGTTAATCACCGCAAAGAGCCAAAATGTATAgg          <  8:94009/139‑1 (MQ=255)            gCTGTTTCATTAAAGAGTTTTCATTTTATCCAAAGCTTTTCAATTTCCTCGAGCGATTTGTTCTTCTTTTCTGGACAGATCGTAACGACAAACAGGAAACAAAGGATGTTAATCACCGCAAAGATCCAAAATGTATAgg          >  6:123494/1‑139 (MQ=255)             cTGTTTCATTAAAGCGTTTTCATTTTATCCAAAGCTTTTCAATTTCCTCGAGCGATTTGTTCTTCGTTTCTGGACAGATCGTAACGACAAACAGGAAACAAAGGATGTTAATCACCGCAAAGATCCAAAATGTATAGGc         <  2:198156/139‑1 (MQ=255)             cTGTTTCATTAAAGCGTTTTCATTTTATCCAAAGCTTTTCAATTTCCTCGAGCGATTTGTTCTTCGTTTCTGGACAGATCGTAACGACAAACAGGAAACAAAGGATGTTAATCACCGCAAAGATCCAAAATGTATAGGc         <  1:110127/139‑1 (MQ=255)                tttCATTAAAGCGTTTTCATTTTATCCAAAGCTTTTCAATTTCCTCGAGCGATTTGTTCTTCGTTTCTGGACAGATCGTAACGACAAACAGGAAACAATGGATGTTAATCACCGCAAAGATCCAAAATGTATAGGCGAg      <  3:452935/139‑1 (MQ=255)                tttCATTAAAGCGTTTTCATTTTATCCAAAGCTTTTCAATTTCCTCGAGCGATTTGTTCTTCGTTTCTGGACAGATCGTAACGACAAACAGGAAACAAAGGATGTTAATCACCGCAAAGATCCAAAATGTATAGGCg        <  5:218068/137‑1 (MQ=40)                tttCATTAAAGCGTTTTCATTTTATCCAAAGCTTTTCAATTTCCTCGAGCGATTTGTTCTTCGTTTCTGGACAGATCGTAACGACAAACAGGAAACAAAGGATGTTAATCACCGCAAAGATCCAAAATGTATAGGCGAg      <  5:100191/139‑1 (MQ=40)                 ttCATTAAAGCGTTTTCATTTTATCCAAAGCTTTTCAATTTCCTCGAGCGATTTGTTCTTCGTTTCTGGACAGATCGTAACGACAAACAGGAAACAAAGGATGTTAATCACCGCAAAGATCCAAAATGTATAGGCGAg      <  3:460317/138‑1 (MQ=40)                     ttAAAGCGTTTTCATTTTATCCAAAGCTTTTCAATTTCCTCGAGCGATTTGTTCTTCGTTTCTGGACAGATCGTAACGACAACCAGGAAACAAAGGATGTTAATCACCGCAAAGATCCAAAATGTAGAGGCGAGCCCg  >  6:273298/1‑138 (MQ=255)                        aaGCGTTTTCATTTTATCCAAAGCTTTTCAATTTCCTCGAGCGATTTGTTCTTCGTTTCTGGACAGATCGTAACGACAAACAGGAAACAAAGGATGTTAATCACCGCAAAGATCCa                     <  8:138512/116‑1 (MQ=34)                        aaGCGTTTTCATTTTATCCAAAGCTTTTCAATTTCCTCGAGCGATTTGTTCTTCGTTTCTGGACAGATCGTAACGACAAACAGGAAACAAAGGATGTTAATCACCGCAAAGATACa                     >  7:138512/1‑116 (MQ=21)                                                                                                                                           |                    CCGTAGAAAGGGCTGTTTCATTAAAGCGTTTTCATTTTATCCAAAGCTTTTCAATTTCCTCGAGCGATTTGTTCTTCGTTTCTGGACAGATCGTAACGACAAACAGGAAACAAAGGATGTTAATCACCGCAAAGATCCAAAATGTATAGGCGAGCCCG  >  CP006881/3301895‑3302052

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑