Predicted mutation
evidence seq id position mutation annotation gene description
RA CP006881 2,529,258 T→C Y280C (TAT→TGT)  U712_12985 ← Uncharacterized protein yrkH

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0068812,529,2580TC98.2% 409.0 / ‑2.0 112Y280C (TAT→TGT) U712_12985Uncharacterized protein yrkH
Reads supporting (aligned to +/- strand):  ref base T (1/1);  new base C (61/49);  total (62/50)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.61e-01

Only 100 of 112 total aligned reads displayed.

AAACCATGGTTCTCGCTAAATAATGTACTTAGTTGTTTACCAACACTTCCATTCTCATTTAGCTCGTCAATGATCATAAAGTGTGCCGGTAATACAATTAAATCCTTTGATAACGCTTTGTAACGGCTATAAAGCGTTTTTCTTAAATCTCCTACCCAATCTTCTGCCATACCGGCTAAGTCTGGTCTGCCGATTGAATCAATAAACAAGATATCACCTGAAAGAAGATACTGGTCATCGACAATGAAAGAAGTGGAGCCAATCG  >  CP006881/2529129‑2529393
                                                                                                                                 |                                                                                                                                       
 aaCCATGGTTCTCGCTAAATAATGTACTTAGTTGTTTACCAACACTTCCATTCTCATTTAGCTCGTCAATGATCATAAAGTGTGCCGGTAATACAATTAAATCCTTTGATAACGCTTTGTAACGGCTACAAAGCGtttt                                                                                                                               <  2:355804/139‑1 (MQ=255)
  aCCATGGTTATCGCTAAATAATGTACTTAGTTGTTTACCAACACTTCCATTCTCATTTAGCTCTTCAATGATCATAAAGTGTGCCGGTAATACAATTATATCCTTTGATAACGCTTAGTAACGGATACAAAGCGatttt                                                                                                                              >  1:372630/1‑139 (MQ=255)
       ggTTCTCGCTAAATAATGTACTTAGTTGTTTACCAACACTTCCATTCTCATTTAGCTCGTCAATGATCATAAAGTGTGCCGGTAATACAATTAAATCCTTTGATAACGCTTTGTAACGGCTACAAAGCGTTTTTCTTa                                                                                                                          >  8:287943/1‑138 (MQ=255)
       ggTTCTCGCTAAATAATGTACTTAGTTGTTTACCAACACTTCCATTCTCATTTAGCTCGTCAATGATCATAAAGTGTGCCGGTAATACAATTAAATCCTTTGATAACGCTTTGTAACGGCTACAAAGCGTTTTTCTTa                                                                                                                          >  6:447780/1‑138 (MQ=255)
       ggTTCTCGCTAAATAATGTACTTAGTTGTTTACCAACACTTCCAATCTCATTTAGCTCGCCAATGATCATAAAGTGTGACTGTAATACAAATAAATCCTTTGATAACGCTTTGTAACTGCTATAAAGCGTTTTTCTTa                                                                                                                          >  5:351554/1‑138 (MQ=255)
       ggTTCTCGCTAAATAATGTACTTAGTTGTTTACCAACACTTCCAAACTCATTTAGCTCGTCAATCATCATAAAGTGTGCCGGTAATACAATTAAATCCTATGATAACGCTTTGTAACGGCTACAAAGCGATTATCTTa                                                                                                                          >  5:329412/1‑138 (MQ=255)
        gTTCTCGCTAAATAATGTACTTAGTTGTTTACCAACACTTCCATTCTCATTTAGCTCGTCAATGATCATAAAGTGTGCCGGTAATACAATTAAATCCTTTGATAACGCTTTGTAACGGCTACAAAGCGTTTTTCTTaa                                                                                                                         <  7:49796/138‑1 (MQ=255)
        gTTCTCGCTAAATAATGTACTTAGTTGTTTACCAACACTTCCATTCTCATTTAGCTCGTCAATGATCATAAAGTGTGCCGGTAATACAATTAAATCCTTTGATAACGCTTTGTAACGGCTACAAAGCGTTTTTCTTaa                                                                                                                         <  3:112792/138‑1 (MQ=255)
              gCTAAATAATGTACTTAGTTGTTTACCACCACTTCCATTCTCATTTAGCTCGTCAATGATCATAAAGTGTGCCGGTAATACAATTAAATCCTTTGATAACGCTTTGTAACGGCTACAAAGCGTTTTTCTTAAATCTcc                                                                                                                   >  3:454948/1‑138 (MQ=255)
              gCTAAATAATGTACTTAGTTGTTTACCAACACTTCCATTCTCATTTAGCTCGTCAATGATCATAAAGTGTGCCGGTAATACAATTAAATCCTTTGATAACGCTTTGTAACGGCTACAAAGCGTTTTTCTTAAAtctc                                                                                                                    <  8:22437/137‑1 (MQ=255)
              gCTAAATAATGTACTTAGTTGTTTACCAACACTTCCATTCTCATTTAGCTCGTCAATGATCATAAAGTGTGCCGGTAATACAATTAAATCCTTTGATAACGCTTTGTAACGGCTACAAAGCGTTTTTCTTAAAtctc                                                                                                                    <  2:464376/137‑1 (MQ=255)
              gCTAAATAATGTACTTAGTTGTTTACCAACACTTCCATTCTCATTTAGCTCGTCAATGATCATAAAGTGTGCCGGTAATACAATTAAATCCTTTGATAACGCTTTGTAACGGCTACAAAGCGTTTTTCTTAAAtctc                                                                                                                    <  5:77588/137‑1 (MQ=255)
              gCTAAATAATGTACTTAGTTGTTTACCAACACTTCCATTCTCATTTAGCTCGTCAATGATCATAAAGTGTGCCGGTAATACAATTAAATCCTTTGATAACGCTTTGTAACGGCTACAAAGCGTTTTTCTTAAATCTcc                                                                                                                   >  1:31365/1‑138 (MQ=255)
              gCTAAATAATGTACTTAGTTGTTTACCAACACTTCCATTCTCATTTAGCTCGTCAATGATCATAAAGTGTGCCGGTAATACAATTAAATCCTTTGATAACGCTTTGTAACGGCTACAAAGCGTTTTTCTTAAATCTcc                                                                                                                   >  5:286690/1‑138 (MQ=255)
              gCTAAATAATGTACTTAGTTGTTTACCAACACTTCCATTCTCATTTAGCTCGTCAATGATCATAAAGTGTGCCGGTAATACAATTAAATCCTTTGATAACGCTTTGTAACGGCTACAAAGCGTTTTTCTTAAATCTcc                                                                                                                   >  8:479700/1‑138 (MQ=255)
                 agataatGTACTTAGTAGTTTACCAACACTTCCATTCTCATTTAGCTCGTCAATGATCATAAAGTGTGCCGCTAATACACTTAAATCCTTTGATAACGCTTTGTAACGGCTACAAAGCGTTTTTCTTAAATCTCCTAcc                                                                                                               <  3:263925/137‑1 (MQ=255)
                  aataatGTACTTAGTTGTTTACCAACACTTCCATTCTCATTTAGCTCGTCAATGATCATAAAGTGTGCCGGTAATACAATTAAATCCTTTGATAACGCTTTGTAACGGCTACAAAGCGTTTTTCTTAAATCTCCTcccg                                                                                                              >  1:460839/1‑138 (MQ=255)
                  aataatGTACTTAGTTGTTTACCAACACTTCCATTCTCATTTAGCTCGTCAATGATCATAAAGTGTGCCGGTAATACAATTAAATCCTTTGATAACGCTTTGTAACGGCTACAAAGCGTTTTTCTTAAATCTCCTAcc                                                                                                               <  8:109396/138‑1 (MQ=255)
                   ataatGTACTTAGTTGTTTACCAACACTTCCATTCTCATTTAGCTCGTCAATGATCATAAAGTGTGCCGGTAATACAATTAAATCCTTTGATAACGCTTTGTAACGGCTACAAAGCGTTTTTCTTAAATCTCCTAccc                                                                                                              >  6:69395/1‑138 (MQ=255)
                      atGTACTTAGTTGTTTACCAACACTTCCATTCTCATTTAGCTCGTCAATGATCATTAAGTGTGCCGGTAATACAATTAAATCCTTTGATAACGCTTTGTAACGGCTACAAAGCGTTTTTCTTAAATCTCCTACCCAAtc                                                                                                          <  8:3531/139‑1 (MQ=255)
                      atGTACTTAGTTGTTTACCAACACTTCCATTCTCATTTAGCTCGTCAATGATCATAAAGTGTGCCGGTAATACAATTAAATCCTTTGATAACGCTTTGTAACGGCTACAAAGCGTTTTTCTTAAATCTCCTACCCAAtc                                                                                                          <  7:479700/139‑1 (MQ=255)
                            ttAGTTGTTTACCAACACTTCCATTCTCATTTAGCTCGTCAATGATCATAAAGTGTGCCGGTAATACAATTAAATCCTTTGATAACGCTTTGTAACGGCTACAAAGCTTTTTTCTTAAATCTCCTACCAAATCTACTGc                                                                                                    >  2:284646/1‑139 (MQ=255)
                            ttAGTTGTTTACCAACACTTCCATTCTCATTTAGCTCGTCAATGATCATAAAGTGTGCCGGTAATACAATTAAATCCTTTGATAACGCTTTGTAACGGCTACAAAGCGTTTTTCTTAAATCTCCTACCCAATCTTCTGc                                                                                                    >  1:269529/1‑139 (MQ=255)
                              aGTTGTTTACCAACACTTCCATTCTCATTTAGCTCGTCAATGATCATAAAGTGTGCCGGTAATACAATTAAATCCTTTGATAACGCTTTGTAACGGCTACAAAGCGTTTTTCTTAAATCTCCTACCCa                                                                                                             <  6:173389/128‑1 (MQ=255)
                              aGTTGTTTACCAACACTTCCATTCTCATTTAGCTCGTCAATGATCATAAAGTGTGCCGGTAATACAATTAAATCCTTTGATAACGCTTTGTAACGGCTACAAAGCGTTTTTCTTAAATCTCCTACCCa                                                                                                             >  5:173389/1‑128 (MQ=255)
                              aGTTGTTTACCAACACTTCCATTCTCATTTAGCTCGTCAATGATCATAAAGTGTGCCGGTAATACAATTAAATCCTTTGATAACGCTTTGTAACGGCTACAAAGCGTTTTTCTTAAATCTCCTACCCAATCTTCTGcc                                                                                                   >  4:426924/1‑138 (MQ=255)
                              aGTTGTTTACCAACACTTCCATTCTCATTTAGCTCGTCAATGATCATAAAGTGTGCCGGTAATACAATTAAATCCTTTGATAACGCTTTGTAACGGCTACAAAGCGTTTTTCTTAAATCTCCTACCCAATCTTCTGCCa                                                                                                  >  7:72001/1‑139 (MQ=255)
                              aGTTGTTTACCAACACTTCCATTCTCATTTAGCTCGTCAATGATCATAAAGTGTGCCGGTAATACAATTAAATCCTTTGATAACGCTTTGTAACGGCTACAAAGCGTTTTTCTTAAATCTCCTACCCAATCTTCTGCCa                                                                                                  >  3:268631/1‑139 (MQ=255)
                              aGTTGTTTACCAACACTACCATTCTCATTTAGCACGACAAAGATCATAAAGTGTGCCGGTAATACAATTAAATCCTTTGATAACGCTTTGTAACGCCTACAAAGCGTTTTTCTTAAAGCTCATCACCAAACTTCTGcct                                                                                                  >  4:263925/1‑138 (MQ=255)
                                ttgttTACCAACACTTGCATTCTCATTTAGCTCGTCAATGATCATAAAGTGTGCCGGTAATACAATTAAATCCTTTGATAACGCTTTGTAACGGCTACAAAGCGTTTTTCTTAAATCTCCTACCCAATCTTCTGCCATa                                                                                                <  6:329412/139‑1 (MQ=255)
                                ttgttTACCAACACTTCCATTCTCATTTAGCTCGTCAATGATCATAAAGTGTGCCGGTAATACAATTAAATCCTTTGATAACGCTTTGTAACGGCTACAAAGCGTTTTTCTTAAATCTCCTACCCAATCTTCTGCCATa                                                                                                <  6:400744/139‑1 (MQ=255)
                                ttgttTACCAACACTTCCATTCTCATTTAGCTCGTCAATGATCATAAAGTGTGCCGGTAATACAATTAAATCCTTTGATAACGCTTTGTAACGGCTACAAAGCGTTTTTCTTAAATCTCCTACCCAATCTTCTGCCATa                                                                                                <  7:163334/139‑1 (MQ=255)
                                ttgttTACCAACACTTCCATTCTCATTTAGCTCGTCAATGATCATAAAGTGTGCCGGTAATACAATTAAATCCTTTGATAACGCTTTGTAACGGCTACAAAGCGTTTTTCTTAAATCTCCTACCCAATCTTCTGCCATa                                                                                                <  5:169798/139‑1 (MQ=255)
                                     tACCAACACTTCCATTCTCATTTAGCTCGTCAATGCTCATAAAGTGTGCCGGTAATACAATTAAATCCTTTGATAACGCTTTGTAACGGCTACAAAGCGTTTTTCTTAAATCTCGTACCCATTCTTCTGCGATACCGGc                                                                                           >  4:286193/1‑139 (MQ=255)
                                     tACCAACACTTCCATTCTCATTTAGCTCGTCAATGATCATAAAGTGTGCCGGTAATACAATTAAATCCTTTGATAACGCTTTGTAACGGCTACAAAGCGTTTTTCTTAATtctc                                                                                                                    <  7:28194/114‑1 (MQ=255)
                                     tACCAACACTTCCATTCTCATTTAGCTCGTCAATGATCATAAAGTGTGCCGGTAATACAATTAAATCCTTTGATAACGCTTTGTAACGGCTACAAAGCGTTTTTCTTAAAtctc                                                                                                                    >  8:28194/1‑114 (MQ=255)
                                     tACCAACACTTCCATTCTCATTTAGCTCGTCAATGATCATAAAGTGTGCCGGTAATACAATTAAATCCTTTGATAACGCTTTGTAACGGCTACAAAGCGTTTTTCTTAAAtctc                                                                                                                    <  1:490069/114‑1 (MQ=255)
                                     tACCAACACTTCCATTCTCATTTAGCTCGTCAATGATCATAAAGTGTGCCGGTAATACAATTAAATCCTTTGATAACGCTTTGTAACGGCTACAAAGCGTTTTTCTTAAAtctc                                                                                                                    >  2:490069/1‑114 (MQ=255)
                                     tACCAACACTTCCATTCTCATTTAGCTCGTCAATGATCATAAAGTGTGCCGGTAATACAATTAAATCCTTTGATAACGCTTTGTAACGGCTACAAAGCGTTTTTCTTAAATCTCCTACCCAATCTTCTGCCATACCGGc                                                                                           >  5:452309/1‑139 (MQ=255)
                                       ccAACACTTCCATTCTCATTTAGCTCGTCAATGATCATAAAGTGTGCCGGTAATACAATTAAATCCTTTGATAACGCTTTGTAACGGCTACAAAGCGTTTTTCTTAAATCTCCTACCCAATCTTCTGCCATACCGGCt                                                                                          <  2:31365/138‑1 (MQ=255)
                                          acacTTCCATTCTCATTTAGCTCGTCAATGATCATAAAGTGTGCCGGTAATACAATTAAATCCTTTGATAACGCTTTGTAACGGCTACAAAGCGTTTTTCTTAAATCTCCTACCCAATCTTCTGCCATACCGGCTAAgt                                                                                      >  2:326077/1‑139 (MQ=255)
                                          acacTTCCATTCTCATTTAGCTCGTCAATGATCATAAAGTGTGCCGGTAATACAATTAAATCCTTTGATAACGCTTTGTAACGGCTACAAAGCGTTTTTCTTAAATCTCCTACCCAATCTTCTGCCATACCGGCTAAgt                                                                                      >  2:377216/1‑139 (MQ=255)
                                                  aTTCTCATTTAGCTCGTCAATGATCATAAAGTGTGCCGGTAATACAATTAAATCCTTTGATAACGCTTTGTAACGGCTACAAAGCGTTTTTCTTAAATCTCCTACCCAATCTTCTGCCATACCGGCTAAgtctggtctg                                                                              <  8:100790/139‑1 (MQ=255)
                                                      tcATTTAGCTCGTCAATGATCATAAAGTGTGCCGGTAATACAATTAAATCCTTTGATAACGCTTTGTAACGGCTACAAAGCGTTTTTCTTAAATCTCCTACCCAATCTTCTGCCATACCGGCTAAGTCTGGTCTGCCGa                                                                          >  6:156998/1‑139 (MQ=255)
                                                        aTTTAGCTCGTCAATGATCATAAAGTGTGCCGGTAATACAATTAAATCCTTTGATAACGCTTTGTAACGGCTACAAAGCGTTTTTCTTAAATCTCCTACCCAATCTTCTGCCATACCGGCTAAGTCTGGTCTGCCGAtt                                                                        >  3:75384/1‑139 (MQ=255)
                                                        aTTTAGCTCGTCAATGATCATAAAGTGTGCCGGTAATACAATTAAATCCTTTGATAACGCTTTGTAACGGCTACAAAGCGTTTTTCTTAAATCTCCTACCCAATCTTCTGCCATACCGGCTAAGTCTGGTCTGCCGAtt                                                                        >  6:392608/1‑139 (MQ=255)
                                                          ttAGCTCGTCAATGATCATAAAGTGTGCCGGTAATACAATTAAATCCTTTGATAACGCTTTGTAACGGCTACAAAGCGTTTTTCTTAAATCTCCTACCCAATCTTCTGCCATACCGTCTAAGTCTGGTCTGCCGATTg                                                                       >  8:49284/1‑138 (MQ=255)
                                                             gCTCGTCAATGATCATAAAGTGTGCCGGTAATACAATTAAATCCTTTGATAACGCTTTGTAACGGCTACAAAGCGTTTTTCTTAAATCTCCTACCCAATCTTCTGCCATACCGGCTAAGTCTGGTCTGCCGATTGAAt                                                                    <  2:269529/138‑1 (MQ=255)
                                                             gCTCGTCAATGATCATAAAGTGTGCCGGTAATACAATTAAATCCTTTGATAACGCTTTGTAACGGCTACAAAGCGTTTTTCTTAAATCTCCTACCCAATCTTCTGCCATACCGGCTAAGTCTGGTCTGCCGATTGAATc                                                                   <  4:443329/139‑1 (MQ=255)
                                                                  tCAATGATCATAAAGTGTGCCGGTAATACAATTAAATCCTTTGATAACGCTTTGTAACGGCTACAAAGCGTTTTTCTTAAATCTCCTACCCAATCTTCTGCCATAc                                                                                               <  3:342540/106‑1 (MQ=255)
                                                                  tCAATGATCATAAAGTGTGCCGGTAATACAATTAAATCCTTTGATAACGCTTTGTAACGGCTACAAAGCGTTTTTCTTAAATCTCCTACCCAATCTTCTGCCATACCGGCTAAGTCTGGTCTGCCGATTGAATCAATa                                                               >  8:155254/1‑138 (MQ=255)
                                                                        aTCATAAAGTGTGCCGGTAATACAATTAAATCCTTTGATAACGCTTTGTAACGGCTACAAAGCGTTTTTCTTAAATCTCCTACCCAATCTTCTGCCATACCGGCTAAGTCTGGTCTGCCGATTGAATCAATAAAc                                                            >  5:429412/1‑135 (MQ=255)
                                                                           aTAAAGTGTGCCGGTAATACAATTAAATCCTTTGATAACGCTTTGTAACGGCTACAAAGCGTTTTTCTTAAATCTCCTACCCAATCTTCTGCCATACCGGCTAAGTCTGGTCTGCCGATTGAATCAATAAACAAGatat                                                     <  7:155254/139‑1 (MQ=255)
                                                                           aTAAAGTGTGCCGGTAATACAATTAAATCCTTTGATAACGCTTTGTAACGGCTACAAAGCGTTTTTCTTAAATCTCCTACCCAATCTTCTGCCATACCGGCTAAGTCTGGTCTGCCGATTGAATCAATAAACAAGatat                                                     >  8:139559/1‑139 (MQ=255)
                                                                           aTAAAGTGTGCCGGTAATACAATTAAATCCTTTGATAACGCTTTGTAACGGCTACAAAGCGTTTTTCTTAAATCTCCTACCCAATCTTCTGCCATACCGGCTAAGTCTGGTCTGCCGATTGAATCAATAAACAAGata                                                      >  2:248596/1‑138 (MQ=255)
                                                                                 tgtgTCGGTAATACAATTAAATCCTTTGATAACGCTTTGTAACGGCTACAAAGCGTTTTTCTTAAATCTCCTACCCAATCTTCTGCCATACCGGCTAAGTCTGGTCTGCCGATTGAATCAATAAACAAGATATCACCTg                                               <  6:370638/139‑1 (MQ=255)
                                                                                 tgtgCCGGTAATACAATTAAATCCTTTGATAACGCTTTGTAACGGCTACAAAGCGTTTTTCTTAAATCTCCTACCCAATCTTCTGCCATACCGGCTAAGTCTGGTCTGCCGATTGAATCAATAAACAAGATATCACCTg                                               <  4:214213/139‑1 (MQ=255)
                                                                                 tgtgCCGGTAATACAATTAAATCCTTTGATAACGCTTTGTAACGGCTACAAAGCGTTTTTCTTAAATCTCCTACCCAATCTTCTGCCATACCGGCTAAGTCTGGTCTGCCGATTGAATCAATAAACAAGATATCACCTg                                               <  2:398377/139‑1 (MQ=255)
                                                                                 tgtgCCGGTAATACAATTAAATCCTTTGATAACGCTTTGTAACGGCTACAAAGCGTTTTTCTTAAATCTCCTACCCAATCTTCTGCCATACCGGCTAAGTCTGGTCTGCCGATTGAATCAATAAACAAGATATCACCTg                                               <  1:281383/139‑1 (MQ=255)
                                                                                 tgtgCCGGTAATACAATTAAATCCTTTGATAACGCTTTGTAACGGCTACAAAGCGTTTTTCTTAAATCTCCTACCCAATCTTCTGCCATACCGGCTAAGTCTGGTCTGCCGATTGAATCAATAAACAAGATATCACCTg                                               <  5:69395/139‑1 (MQ=255)
                                                                                   tgCCTGTAATACAATTAAATCCTTTGATAACGCTTTGTAACGGCTACAAAGCGTTTTTCTTAAATCTCCTACCCAATCTTCTGCCATACCGGCTAAGTCTGGTCTGCCGATTGAATCAATAAACAAGATATCACCTGa                                              >  1:136841/1‑138 (MQ=255)
                                                                                   tgCCGGTAATACAATTAATTCCTTTGATAACGCTTTGTAACGGCTACAAAGCGTTTTTCTTAAATCTCCTACCCAATCTTCTGCCATACCGGCTAAGTCTGGTCTGCCGATTGAATCAATAAACAAGATATCACCTGa                                              >  7:24010/1‑138 (MQ=255)
                                                                                   tgCCGGTAATACAATTAAATCCTTTGATAACGCTTTGTAACGGCTACAAAGCGTTTTTCTTAAATCTCCTACCCAATCTTCTGCCATACCGGCTAAGTCTGGTCTGCCGATTGAATCAATAAACAAGATATCACCTGa                                              >  6:313939/1‑138 (MQ=255)
                                                                                   tgCCGGTAATACAATTAAATCCTTTGATAACGCTTTGTAACGGCTACAAAGCGTTTTTCTTAAATCTCCTACCCAATCTTCTGCCATACCGGCTAAGTCTGGTCTGCCGATTGAATCAATAAACAAGATATCACCTGa                                              >  1:60110/1‑138 (MQ=255)
                                                                                   tgCCGGTAATACAATTAAATCCTTTGATAACGCTTTGTAACGGCTACAAAGCGTTTTTCTTAAATCTCCTACCCAATCTTCTGCCATACCGGCTAAGTCTGGTCTGCCGATTGAATCAATAAACAAGATATCACCTGa                                              >  6:211079/1‑138 (MQ=255)
                                                                                   tgCCGGTAATACAATTAAATCCTTTGATAACGCTTTGTAACGGCTACAAAGCGTTTTTCTTAAATCTCCTACCCAATCTTCTGCCATACCGGCTAAGTCTGGTCTGCCGATTGAATCAATAAACAAGATATCACCTGa                                              >  1:280221/1‑138 (MQ=255)
                                                                                   tgCCGGTAATACAATTAAATCCTTTGATAACGCTTTGTAACGGCTACAAAGCGTTTTTCTTAAATCTCCTACCCAATCTTCTGCCATACCGGCTAAGTCTGGTCTGCCGATTGAATCAATAAACAAGATATCACCTGa                                              >  5:4313/1‑138 (MQ=255)
                                                                                   tgCCGGTAATACAATTAAATCCTTTGATAACGCTTTGTAACGGCTACAAAGCGTTTTTCTTAAATCTCCTACCCAATCTTCTGCCATACCGGCTAAGTCTGGTCTGCCGATTGAATCAATAAACAAGATATCACCTGa                                              <  4:454948/138‑1 (MQ=255)
                                                                                   tgCCGGTAATACAATTAAATCCTTTGATAACGCTTTGTAACGGCTACAAAGCGTTTTTCTTAAATCTCCTACCCAATCTTCTGCCATACCGGCTAAGTCTGGTCTGCCGATTGAATCAATAAACAAGATATCACCTGa                                              >  5:226610/1‑138 (MQ=255)
                                                                                   tgCCGGTAATACAATTAAATCCTTTGATAACGCTTTGTAACGGCTACAAAGCGTTTTTCTTAAATCTCCTACCCAATCTTCTGCCATACCGGCTAAGTCTGGTCTGACGATTGAATCAATAAACAAGATATCACCTGa                                              >  7:452198/1‑138 (MQ=255)
                                                                                    gCCGGTAATACAATTAAATCCTTTGATAACGCTTTGTAACGGCTACAAAGCGTTTTTCTTAAATCTCCTAcc                                                                                                               >  5:159125/1‑72 (MQ=255)
                                                                                     ccGGTAATTCAATTATATGGTTTGATTACGCTTTGTAACGGCTACATAGCGTTTTTCTTAAATCTCCTACCCAATCTTCTGCCATACCGGCTAAGTCTGGTCTGCCGATTGAATCAATAAACAAGATATCACGTGaaa                                            <  1:284646/138‑1 (MQ=255)
                                                                                      cGGTAATACAATTAAATCCTTTGATAACGCTTTGTAACGGCTACAAAGCGTTTTTCTTAAATCTCCTACCCAATCTTCTGCCATACCGGCTAAGTCTGGTCTGCCGATTGAATCAATAAACAAGATATCACCTGAaaga                                          <  3:68893/139‑1 (MQ=255)
                                                                                      cGGTAATACAATTAAATCCTTTGATAACGCTTTGTAACGGCTACAAAGCGTTTTTCTTAAATCTCCTACCCAATCTTCTGCCATACCGGCTAAGTCTGGTCTGCCGATTGAATCAATAAACAAGATATCACCTGAaaga                                          <  5:318300/139‑1 (MQ=255)
                                                                                           aTACAATTAAATCCTTTGATAACGCTTTGTAACGGCTACAAAGCGTTTTTCTTAAATCTCCTACCCAAtc                                                                                                          <  1:476171/70‑1 (MQ=255)
                                                                                           aTACAATTAAATCCTTTGATAACGCTTTGTAACGGCTACAAAGCGTTTTTCTTAAATCTCCTACCCAAtc                                                                                                          >  2:476171/1‑70 (MQ=255)
                                                                                                   aaaTCCTTTGATAACGCTTTGTAACGGCTACAAAGCGTTTTTCTTAAATCTCCTACCCAATCTTCTGCCATACCGGCTAAGTCTGGTCTGCCGATTGAATCAATAAACAAGATATCACCTGAAAGAAGATACTGGTCa                              <  2:436248/138‑1 (MQ=255)
                                                                                                    aaTCCTTTGATAACGCTTTGTAACGGCTACAAAGCGTATTTCTTAAATCTCCTACCCAATCTTCTGCCATACCGGCTAAGTCTGGTCTGCCGATTGAATCAATAAACAAGTTATCACCTGAAAGAAGATACTGGTCATc                            >  6:324512/1‑139 (MQ=255)
                                                                                                        cTTTGATAACGCTTTGTAACGGCTACAAAGCGTTTTTCTTAAATCTCCTACCCAATCTTCTGCCATCCCGGCTAAGTCTGGTCTACCGATTGAATCAATAAACAAGATATCACCTGAAAGAAGATACTGGTCATCGACa                        <  8:346020/139‑1 (MQ=255)
                                                                                                         tttGATAACGCTTTGTAACGGCTACAAAGCGTTTTTCTTAAATCTCCTACCCAATCTTCTGCCATACCGGCGAAGTCTGGTCTGCCGCTTGAATAAATAAACAATAGATCACCTGAAAGAAGATACTGGTCATCGACaa                       >  5:279094/1‑139 (MQ=255)
                                                                                                           tGATAACGCTTTGTAACGGCTACAAAGCGTTTTTCTTAAATCTCCTACCCAATCTTCTGCCATACCGGCTAAGTCTGGTCTGCCGATTGAATCAATAAACAAGATATCACCTGAaaga                                          <  5:113807/118‑1 (MQ=255)
                                                                                                           tGATAACGCTTTGTAACGGCTACAAAGCGTTTTTCTTAAATCTCCTACCCAATCTTCTGCCATACCGGCTAAGTCTGGTCTGCCGATTGAATCAATAAACAAGATATCACCTGAaaga                                          >  6:113807/1‑118 (MQ=255)
                                                                                                           tGATAACGCTTTGTAACGGCTACAAAGCGTTTTTCTTAAATCTCCTACCCAATCTTCTGCCATACCGGCTAAGTCTGGTCTGCCGATTGAATCAATAAACAAGATATCACCTGAAAGAAGATACTGGTCATCGACaa                       <  2:280221/137‑1 (MQ=255)
                                                                                                             aTAACGCTTTGTAACGGCTACAAAGCGTTTTTCTTAAATCTCCTACCCAATCTTCTGCCATACCTGATAAGTCTGGTCTGCCGATTGAATCAATAAACAAGATATCACCTGAAAGAAGATACTGGTCATCGACAATGa                    <  3:362469/138‑1 (MQ=255)
                                                                                                             aTAACGCTTTGTAACGGCTACAAAGCGTTTTTCTTAAATCTCCTACCCAATCTTCTGCCATACCGGCTAAGTCTGGTCTGCCGATTGAATCAATAAACAAGATATCACCTGAAAGAAGATACTGGTCATCGACAATGa                    <  6:178585/138‑1 (MQ=255)
                                                                                                               aaCGCTATGTAACGGCTACAAAGCGTTTTTCTTAAATCTCCTACCCAATCTTCTGCCATACCGGCTAAGTCTGGTCTGCCGATTGAATCAATAAACAAGATATCACCTGAAAGAAGATACTGGTCATCGACAATGAaag                 <  4:14143/139‑1 (MQ=255)
                                                                                                                aCGCTTTGTAACGGCTACAAAGCGTTTTTCTTAAATCTCCTACCCAATCTTCTGCCATACCGGCTAAGTCTGGTCTGCCGATTGAATCAATAAACAAGATATCACCTGAAAGAAGATACTGGTCATCGACAATGAaag                 <  4:75384/138‑1 (MQ=255)
                                                                                                                 cGCTTTGTAACGGCTACAAAGCGTTTTTCTTAAATCTCCTACCCAATCTTCTGCCATACCGGCTAAGTCTGGTCTGCCGATTGAATCAATAAACAAGATATCACCTGAAAGAAGATACTGGTCATCGACAATGAaagaa               >  6:151169/1‑139 (MQ=255)
                                                                                                                 cGCTTTGTAACGGCTACAAAGCGTTTTTCTTAAATCTCCTACCCAATCTTCTGCCATACCGGCTAAGTCTGGTCTGCCGATTGAATCAATAAACAAGATATCACCTGAAAGAAGATACTGGTCATCGACAATGAaag                 >  1:306534/1‑137 (MQ=255)
                                                                                                                      tGTAACGGCTACAAAGCGTTTTTCTTAAATCTCCTACCCAATCTTCTGCCATACCGGc                                                                                           >  6:261437/1‑58 (MQ=255)
                                                                                                                      tGTAACGGCTACAAAGCGTTTTTCTTAAATCTCCTACCCAATCTTCTGCCATACCGGc                                                                                           <  5:261437/58‑1 (MQ=255)
                                                                                                                      tGTAACGGCTACAAAGCGTTTTTCTTAAATCTCCTACCCAATCTTCTGCCATACCGGCTAAGTCTGGTCTGCCGATTGAATCAATAAACAAGATATCACCTGAAAGAAGATACTGGTCATCGACAATGAAAGAAGTg            >  1:332742/1‑137 (MQ=255)
                                                                                                                      tGTAACGGCTACAAAGCGTTTTTCTTAAATCTCCTACCCAATCTTCTGCCATACCGGCTAAGTCTGGTCTGCCGATTGAATCAATAAACAAGATATCACCTGAAAGAAGATACTGGTCATCGACAATGAAAGAAGTg            >  1:74379/1‑137 (MQ=255)
                                                                                                                        tAACGGCTACAAAGCGTTTTTCTTAAATCTCCTACCCAATCTTCTGCCATACCGGCTAAGTCTGGTCTGCCGATTGAATCAATAAACAAGATATCACCTGAAAGAAGATACTGGTCATCGACAATGAAAGAAGTGGAGc        <  2:306534/139‑1 (MQ=255)
                                                                                                                           cGGCTACAAAGCGTTTTTCTTAAATCTCCTACCCAATCTTCTGCCATACCGGCTAAGTCTGGTCTGCCGATTGAATCAATAAACAAGATATCACCTGAAAGAAGATACTGGTCATCGACAATGAAAGAAGTGTAGCCaa     >  4:35954/1‑139 (MQ=255)
                                                                                                                           cGGCTACAAAGCGTTTTTCTTAAATCTCCTACCCAATCTTCTGCCATACCGGCTAAGTCTGGTCTGCCGATTGAATCAATAAACAAGATATCACCTGAAAGAAGATACTGGTCATCGACAATGAAAGAAGTGGAGCCa      >  4:16069/1‑138 (MQ=255)
                                                                                                                             gCTACAAAGCGTTTTTCTTAAATCTCCTACCCAATCTTATGCCATACCGGCTAAGTCTGGTCTGCCGATTGAATCAATAAACACGATATCACCTGAAAGAAGATACTGGTCATCGACAATGAAAGAAGTGGAGCCaa     >  6:267592/1‑137 (MQ=255)
                                                                                                                              cTACAAAGCGTTTTTCTTAAATCTCCTCCCCAATCTTCTGCCATACCGGCTAAGTGTGGTCGGCCGATTGAATCAAAAAACAAGATATCACCTGATAGAAGATACTGGTCTTCGACAATCAAAGAAGTGTCGCCAATCg  >  2:483129/1‑139 (MQ=255)
                                                                                                                              cTACAAAGCGTTTTTCTTAAATCTCCTACCCAATCTTCTGCCATACCGGCTAAGTCTGGTCTGCCGATTGAATCAATAAACAAGATATCACCTGAAAGAAGATACTGGTCATCGACAATGAAAGAAGTGGAGCCAATCg  >  7:326238/1‑139 (MQ=255)
                                                                                                                              cTACAAAGCGTTTTTCTTAAATCTCCTACCCAATCTTCTGCCATACCGGCTAAGTCTGGTCTGCCGATTGAATCAATAAACAAGATATCACCTGAAAGAAGATACTGGTCATCGACAATGAAAGAAGTGGAGCCAATCg  >  4:407271/1‑139 (MQ=255)
                                                                                                                                 |                                                                                                                                       
AAACCATGGTTCTCGCTAAATAATGTACTTAGTTGTTTACCAACACTTCCATTCTCATTTAGCTCGTCAATGATCATAAAGTGTGCCGGTAATACAATTAAATCCTTTGATAACGCTTTGTAACGGCTATAAAGCGTTTTTCTTAAATCTCCTACCCAATCTTCTGCCATACCGGCTAAGTCTGGTCTGCCGATTGAATCAATAAACAAGATATCACCTGAAAGAAGATACTGGTCATCGACAATGAAAGAAGTGGAGCCAATCG  >  CP006881/2529129‑2529393

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: