| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP006881 | 2,688,788 | T→C | E19G (GAG→GGG) | U712_13860 ← | Uncharacterized protein ysxE |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 2,688,788 | 0 | T | C | 98.3% | 618.7 / NA | 173 | E19G (GAG→GGG) | U712_13860 | Uncharacterized protein ysxE |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (82/88); minor base A (1/2); total (83/90) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 173 total aligned reads displayed.
AACGAATGAACGAAAGCCTTTTTCCTCAATCGCCACCATATGATCTGTAAAATGCTTGCCGCGACCTTCTTTCAATTTTTTCAGGGCAAATATGCCGTAGTCTGTATACACTTTCCAAACAAGAGGACTGACAGGCTCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGATTGGGTATCTTCCATTTCATTCACCACATTTTCCGATCACTTACGGTTTACGCATGGCTATTTTTATATTGAGGAATATAGAGAATCTGTCC > CP006881/2688652‑2688920 | aaCGAATGAACGAAAGCCTTTTTCCTCAATCGCCACCATATGATCTGTAAAATGCTTGCCGCGACCTTCTTTCAATTTTTTCAGGGCAAATATGCCGTAGTCTGTATACACTTTCCAAACAAGAGGACTGACAGGCCCa < 8:215240/139‑1 (MQ=255)aaCGAATGAACGAAAGCCTTTTTCCTCAATCGCCACCATATGATCTGTAAAATGCTTGCCGCGACCTTCTTTCAATTTTTTCAGGGCAAATATGCCGTAGTCTGTATACACTTTCCAAACAAGAGGACTGACAGGCCCa < 7:9480/139‑1 (MQ=255)aaCGAATGAACGAAAGCCTTTTTCCTCAATAGCCACCATATGATCTGTAAAATGCTTGCCGCGACCTTCTTTCAATTTTTTCAGGGCAAATATGCCGTAGTCTGTATACACTTTCCAAACAAGAGGACTGACAGGCCCa < 7:81927/139‑1 (MQ=255) cGAATGAACGAAAGCCTTTTTCCTCAATCGCCACCATATGATCTGTAAAATGCTTGCCGCGACCTTCTTTCAATTTTTTCAGGGCAAATATGCCGTAGTCTGTATACACTTTCCAAACAAGAGGACTGACAGGCCCaa > 2:416136/1‑138 (MQ=255) cGAATGAACGAAAGCCTTTTTCCTCAATCGCCACCATATGATCTGTAAAATGCTTGCCGCGACCTTCTTTCAATTTTTTCAGGGCAAATATGCCGTAGTCTGTATACACTTTCCAAACAAGAGGACTGACAGGCCCaa > 6:229492/1‑138 (MQ=255) tGAACGAAAGCCTTTTTCCTCAATCGCCACCATATGATCTGTAAAATGCTTGCCGCGACCTTCTTTCAATTTTTTCAGGGCAAATATGCCGTAGTCTGTATACACTTTCCAAACAAGAGGACTGACAGGCCCAATAAAt < 7:276348/139‑1 (MQ=255) cGAAAGCCTTTTTCCTCAATCGCCACCATATGATCTGTAAAATGCTTGCCGCGACCTTCTTTCAATTTTTTCAGTGCAAATATGCCGTAGTCTGTATACACTTTCCAAACAAGAGGACTGACAGGCCCAATAAATTGAg < 2:17408/139‑1 (MQ=255) cGAAAGCCTTTTTCCTCAATCGCCACCATATGATCTGTAAAATGCTTGCCGCGACCTTCTTTCAATTTTTTCAGGGCAAATATGCCGTAGTCTGTATACACTTTCCAAACAAGAGGACTGACAGGCCCAATAAATTGAg < 2:364326/139‑1 (MQ=255) ccgttttCCTCACTCGCCACCATATGATCTGTAAAATGCTTGCCGCGACCTTCTTTCAATTTTTTCAGGGCAAATATGCCGTAGGCTGTATACACTTTCCAAACAAGAGGACTGACAGGCCCAATAAATTGAGcaggca < 4:30670/136‑1 (MQ=255) ccTTTTTCCTCAATCGCCACCATATGATCTGTAAAATGCTTGCCGCGACCTTCTTTCAATTTTTTCAGGGCAAATATGCCGTAGTCTGTATACACTTTCCAAACAAGAGGACTGACAGGCCCAATAAATTGAGcagtca < 7:388500/139‑1 (MQ=255) cTCAATCGCCACCATATGATCTGTAAAATGCTTGGCGCGACCTTCTTTCAATTTTTTCAGGGCAAATATGCCGTAGTCTGTATACACTTTCCAAACAAGAGGACTGACAGGCCCAATAAATTGAGCAGTCAGTCCGTAt < 4:292820/139‑1 (MQ=255) cAATCGCCACCATATGATCTGTAAAATGCTTGCCGCGACCTTCTTTCAATTTTTTCAGGGCAAATATGCCGTAGTCTGTATACACTTTCCAAACAAGAGGACTGACAGGCCCAATAAATTGAGCAGTCAGTCCGTATTc > 7:403463/1‑139 (MQ=255) accaTATGATCTGTAAAATGCTTGCCGCGACCTTCTTTCAATTTTTTCAGGGCAAATATGCCGTAGTCTGTATACACTTTCCAAACAAGAGGACTGACAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTgaagaa > 3:319296/1‑139 (MQ=255) atGATCTGTAAAATGCTTGCCGCGACCTTCTTTCAATTTTTTCAGGGCAAATATGCCGTAGTCTGTATACACTTTCCAAACAAGAGGACTGACAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGAt > 3:424016/1‑139 (MQ=255) tGATCTGTAAAATGCTTGCCGCGACCTTCTTTCAATTTTTTCAGGGCAAATATGCCGTAGTCTGTATACACTTTCCAAACAAGAGGACTGACAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGAt < 4:134420/138‑1 (MQ=255) gATCTGTAAAATGCTTGCCGCGACCTTCTTTCAATTTTTTCAGGGCAAATATGCCGTAGTCTGTATACACTTTCCAAACAAGAGGACTGACAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGAtt < 4:364369/138‑1 (MQ=255) tGTAAAATGCTTGCCGCGACCTTCTTTCAATTTTTTCAGGGCAAATATGCCGTAGTCTGTATACACTTTCCAAACAAGAGGACTGACAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGATTGGGTa > 3:189879/1‑139 (MQ=255) gTAAAATGCTTGCCGCGCCCTTCTTTCAATTTTTTCAGGGCAAATATGCCGTAGTCTGTATACAATTTCCAAACAATAGGACTGACATGCACAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGATTGGGTa > 2:485813/1‑138 (MQ=255) gTAAAATGCTTGCCGCGACCTTCTTTCAATTTTTTCAGGGCAAATATGCCGTAGTCTGTATACACTTTCCAAACAAGAGGACTGACAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGATTGGGTAt > 7:36784/1‑139 (MQ=255) gTAAAATGCTTGCCGCGACCTTCTTTCAATTTTTTCAGGGCAAATATGCCGTAGTCTGTATACACTTTCCAAACAAGAGGACTGACAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGATTGGGTAt > 2:80354/1‑139 (MQ=255) gTAAAATGCTTGCCGCGACCTTCTTTCAATTTTTTCAGGGCAAATATGCCGTAGTCTGTATACACTTTCCAAACAAGAGGACTGACAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGATTGGGTAt > 4:376979/1‑139 (MQ=255) tAAAATGCTTGCCGCGACCTTCTTTCAATTTTTTCAGGGCAAATATGCCGTAGTCTGTATACACTTTCCAAACAAGAGGACTGACAGGCCCAATAAATTGAGCAGTCAGTCCg < 2:140900/113‑1 (MQ=255) tAAAATGCTTGCCGCGACCTTCTTTCAATTTTTTCAGGGCAAATATGCCGTAGTCTGTATACACTTTCCAAACAAGAGGACTGACAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGATTGGGTATc > 5:469872/1‑139 (MQ=255) tGCTTGCCGCGACCTTCTTTCAATTTTTTCAGGGCAAATATGCCGTAGTCTGTATACACTTTCCAAACAAGAGGACTGACAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGATTGGGTATCTTCCa < 2:284683/139‑1 (MQ=255) tGCTGGCCGCGACCTTCTTTCAATTTTTTCAGGGCAAATATGCCGTAGTCTGTATACACTTTCCAAACAAGAGGACTGACAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGACCCGATTGGGTATCTTCCa < 4:7154/139‑1 (MQ=255) cTTGCCGCGACCTTCTTTCAATTTTTTCAGTGCAAATATGCCGTAGTCTGTATACACTTTCCAAACAAGAGGACTGACAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTg < 3:405881/114‑1 (MQ=255) cTTGCCGCGACCTTCTTTCAATTTTTTCAGGGCAAATATGCCGTAGTCTGTATACACTTTCCAAACAAGAGGACTGACAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTg > 4:405881/1‑114 (MQ=255) gCCGCGACCTTCTTTCAATTTTTTCAGGGCAAATATGCCGTAGTCTGTATACACTTTCCAAACAAGAGGACTGACAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAAc < 2:441127/117‑1 (MQ=255) gCCGCGACCTTCTTTCAATTTTTTCAGGGCAAATATGCCGTAGTCTGTATACACTTTCCAAACAAGAGGACTGACAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAAc > 1:441127/1‑117 (MQ=255) gCCGCGACCTTCTTTCAATTTTTTCAGGGCAAATATGCCGTAGTCTGTATACACTTTCCAAACAAGAGGACTGACAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGATTGGGTATCTTCCTTttca > 5:86636/1‑139 (MQ=255) gCCGCGACCTTCTTTCAATTTTTTCAGGGCAAATATGCCGTAGTCTGTATACACTTTCCAAACAAGAGGACTGACAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGATTGGGTATCTTCCATttca > 8:288659/1‑139 (MQ=255) gCCGCGACCTTCTTTCAATTTTTTCAGGGCAAATATGCCGTAGTCTGTATACACTTTCCAAACAAGAGGACTGACAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGATTGGGTATCTTCCATttca > 5:177317/1‑139 (MQ=255) gCCGCGACCTTCTTTCAATTTTTTCAGGGAAAATATGCCGTAGTCTGTATACACTTTCCAAACAAGAGGACTGCCAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGATTGGGTATCTTCCATttc > 3:254051/1‑138 (MQ=255) gcgACCTTCTTTCAATTTTTTCAGGGCAAATATGCCGTAGTCTGTATACACTTTCCAAACAAGAGGACTGACAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGATTGGGTATCTTCCATttcattc < 8:59217/139‑1 (MQ=255) gcgACCTTCTTTCAATTTTTTCAGGGCAAATATGCCGTAGTCTGTATACACTTTCCAAACAAGAGGACTGACAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGATTGGGTATCTTCCATttcattc < 1:69180/139‑1 (MQ=255) aaTTTTTTCAGGGCAAATATGCCGTAGTCTGTATACACTTTCCAAACAAGAGGACTGACAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGATTGGGTATCTTCCATTTCATTCACCACATTTTCCg < 4:319296/139‑1 (MQ=255) aTTTTTTCAGGGCAAATATGCCGTAGTCTGTATACACTTTCCAAACAAGAGGACTGACAGGCCCAATAAATTGAGcagt > 1:117561/1‑79 (MQ=255) aTTTTTTCAGGGCAAATATGCCGTAGTCTGTATACACTTTCCAAACAAGAGGACTGACAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGATTGGGTATCTTCCATTTCATTCACCACATTTTCCGa > 5:352397/1‑139 (MQ=255) ttttttCAGGGCAAATATGCCGTAGTCTGTATACACTTTCCAAACAAGAGGACTGACAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGATTGGGTATCTTCCATTTCATTCACCACATTTTCCGAt < 4:219716/139‑1 (MQ=255) cAGGGCAAATATGCCGTAGTCTGTCTACCCTTTCCAAACAAGAGGACTGACAGGCCCAATAAATTGAGCAGTCAGTCCGTAATCCTGAAGAACCGATTGGGTATCTTCCATTTCATTCACCACATTTTCCGATCACtt < 6:97154/138‑1 (MQ=255) atggCAAATATGACGTAGTCTGTATACACTTTCCAAACAAGAGGACTGACAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGATTGGGTATCTTCCATTTCATTCACCACATTTTCCGATCACTTa < 2:7927/136‑1 (MQ=255) aGGGCAAATATGCCGTAGTCTGTATACACTTTCCAAACAAGAGGACTGACAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGATTGGGTATCTTCCATTTCATTCACCACATTTTCCGATCACTTa < 6:352397/138‑1 (MQ=255) ccGTAGTCTGTATACACTTTCCAAACAAGAGGACTGACAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGATTGGGTATCTTCCATTTCATTCACCACATTTTCCGATCACTTACGGTTTACGCATg > 1:262921/1‑139 (MQ=255) ccGTAGTCTGTATACACTTTCCAAACAAGAGGACTGACAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGATTGGGTATCTTCCATTTCATTCACCACATTTTCCGATCACTTACGGTTTACGCATg > 5:414463/1‑139 (MQ=255) gTAGTCTGTATACACTTTCCAAACAAGAGGACTGACAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGATTGGGTATCTTCCATTTCATTCACCACATTTTCCGATCACTTACGGTTTACGCATGGc < 8:6890/139‑1 (MQ=255) tAGTCTGTATACACTTTCCAAACAAGAGGACTGACAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGATTGGGTATCTTCCATTTCATTCACCACATTTTCCGATCACTTACGGTTTACGCATGGCt > 8:118318/1‑139 (MQ=255) gTCTGTATACACTTTCCAAACAAGAGGACTGACAGGCCCAATAAATTGAGGAGTCAGTCAGTATTCCTGAAGAACCGATTGGGTATCTTCCATTTCATTCACCACATTTTCCGATCACTTACGGTTTACGCATGGc < 1:73052/136‑1 (MQ=255) gTCTGTATACACTTTCCAAACAAGAGGACTGACAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGATTGGGTATCTTCCATTTCATTCACCACATTTTCCGATCTCTTACGGTTTACGCATGGCTAt > 6:461277/1‑139 (MQ=255) gTCTGTATACACTTTCCAAACAAGAGGACTGACAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGATTGGGTATCTTCCATTTCATTCACCACATTTTCCGATCACTTACGGTTTACGCATGGc > 2:73052/1‑136 (MQ=255) tGTATACACTTTCCAAACAAGAGGACTGACAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGATTGGGTATCTTCCATTTCATTCACCACATTTTCCGAt < 4:440396/112‑1 (MQ=255) tGTATACACTTTCCAAACAAGAGGACTGACAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGATTGGGTATCTTCCATTTCATTCACCACATTTTCCGATCACTTACGGTTTACGCATGGCTAtttt > 7:297239/1‑139 (MQ=255) tGTATACACTTTCCAAACAAGAGGACTGACAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGATTGGGTATCTTCCATTTCATTCACCACATTTTCCGATCACTTACGGTTTACGCATGGCTAtttt > 3:55086/1‑139 (MQ=255) tataCACTTTCCAAACAAGAGGACTGACAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGATTGGGTATCTTCCATTTCATTCACCACATTTTCCGATCACTTACGGTTTACGCATGGCTATTTTta > 4:186794/1‑139 (MQ=255) acacTTTCCAAACAATAGGACAGACAAGCCCAATAAAATGAGCAGTCAGTCCGTATTACTGCAGAACCGTTTTGGTATCTTCCATTTCATTCACCACATTTTCCGATCACTTACGGTTTACGCATGGCTATTTTtata < 4:357378/138‑1 (MQ=255) acacTTTCCAAACAAGAGGACTGACAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGATTGGGTATCTTCCATTTCATTCACCACATTTTCCGATCACTTACGGTTTACGCATGGCTATTTTTatat > 5:274474/1‑139 (MQ=255) cTTTCCAAACAAGAGGACTGACAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGATTGGGTATCTTCCATTTCATTCACCACATTTTCCGAt > 4:162585/1‑104 (MQ=255) cTTTCCAAACAAGAGGACTGACAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGATTGGGTATCTTCCATTTCATTCACCACATTTTCCGAt < 3:162585/104‑1 (MQ=255) cTTTCCAAACAAGAGGACTGACAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGATTGGGTATCTTCCATTTCATTCACCACATTTTCCGATCACTTACGGTTTACGCATGGc < 8:395955/125‑1 (MQ=255) tttCCAAACAAGAGGACTGACAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGATTGGGTATCTTCCATTTCATTCACCACATTTTGCGATCACTTACGGTTAACGAATGGCTATTTTTATATTTAg > 8:332360/1‑139 (MQ=255) tttCCAAACAAGAGGACTGACAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGATTGGGTATCTTCCATTTCATTCACCACATTTTCCGATCACTTACGGTTTACGCATGGCTATTTTTATATTGAg < 1:271924/139‑1 (MQ=255) ttCCAAACAAGAGGACTGACAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGATTGTGTATCTTCCATTTCATTCACCACATTTTCCGATCACTTACGGTTTACGCATGGCTATTTTTATATTGAg > 1:304145/1‑138 (MQ=255) ttCCAAACAAGAGGACTGACAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGATTGGGTATc < 8:363347/74‑1 (MQ=255) ttCCAAACAAGAGGACTGACAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGATTGGGTATCTTCCATTTCATTCACCACATTTTCCGATCACTTACGGt > 6:338348/1‑112 (MQ=255) ttCCAAACAAGAGGACTGACAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGATTGGGTATCTTCCATTTCATTCACCACATTTTCCGATCACTTACGGt < 5:338348/112‑1 (MQ=255) ttCCAAACAAGAGGACTGACAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGATTGGGTATCTTCCATTTCATTCACCACATTTTCCGATCACTTACGGt < 3:44376/112‑1 (MQ=255) ttCCAAACAAGAGGACTGACAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGATTGGGTATCTTCCATTTCATTCACCACATTTTCCGATCACTTACGGt > 4:44376/1‑112 (MQ=255) ttCCAAACAAGAGGACTGACAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGATTGGGTATCTTCCATTTCATTCACCACATTTTCCGATCACTTACGGTTTACGCATGGc > 1:430069/1‑123 (MQ=255) ttCCAAACAAGAGGACTGACAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGATTGGGTATCTTCCATTTCATTCACCACATTTTCCGATCACTTACGGTTTACGCATGGc > 2:128997/1‑123 (MQ=255) ttCCAAACAAGAGGACTGACAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGATTGGGTATCTTCCATTTCATTCACCACATTTTCCGATCACTTACGGTTTACGCATGGCTATTTTtata < 6:36139/133‑1 (MQ=255) ttCCAAACAAGAGGACTGACAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGATTGGGTATCTTCCATTTCATTCACCACATTTTCCGATCACTTACGGTTTACGCATGGCTATTTTtata < 1:390586/133‑1 (MQ=255) ttCCAAACAAGAGGACTGACAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGATTGGGTATCTTCCATTTCATTCACCACATTTTCCGATCACTTACGGTTTACGCATGGCTATTTTTATAtt > 8:274446/1‑135 (MQ=255) ttCCAAACAAGAGGACTGACAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGATTGGGTATCTTCCATTTCATTCACCACATTTTCCGATCACTTACGGTTTACGCATGGCTATTTTTATAtt > 8:257785/1‑135 (MQ=255) ttCCAAACAAGAGGACTGACAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGATTGGGTATCTTCCATTTCATTCACCACATTTTCCGATCACTTACGGTTTACGCATGGCTATTTTTATAtt < 7:257785/135‑1 (MQ=255) ttCCAAACAAGAGGACTGACAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGATTGGGTATCTTCCATTTCATTCACCACATTTTCCGATCACTTACGGTTTACGCATGGCTATTTTTATATTGAgt > 4:112320/1‑138 (MQ=255) ttCCAAACAAGAGGACTGACAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGATTGGGTATCTTCCATTTCATTCACCACATTTTCCGATCACTTACGGTTTACGCATGGCTATTTTTATATTGAg > 3:364102/1‑138 (MQ=255) ttCCAAACAAGAGGACTGACAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGATTGGGTATCTTCCATTTCATTCACCACATTTTCCGATCACTTACGGTTTACGCATGGCTATTTTTATATTGAg > 6:147989/1‑138 (MQ=255) ttCCAAACAAGAGGACTGACAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGATTGGGTATCTTCCAGTTCATTCACCACATTTTCCGATCACTTACGGTTTACGCATGGCTATTTTTATATTGAg > 1:386808/1‑138 (MQ=255) ttCCAAACAAGAGGACTGACAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGATTGGGGATCTTCCATTTCATTCACCACATTTTCCGATCACTTACGGTTTACGCATGGc < 1:128997/123‑1 (MQ=255) ttCCAAACAAGAGGACTGACAGGCCCAATAAATTGAGCAGTCACTCCGTATTACTGAATAACCGATTGGGTAACTTCCATTTCATTCACAACATTTTCCGATCACTTACGGTTTACGCATGGATATATTTATAATGAg > 4:250600/1‑138 (MQ=255) tCCAAACAAGAGGACTGACAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGATTGGGTATCTTCCATTTCATTCACCACATTTTCCGATCACTTACGGTTTACGCATGGCTATTTTTATATTGAgt > 1:158715/1‑137 (MQ=255) tCCAAACAAGAGGACTGACAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGATTGGGTATCTTCCATTTCATTCACCACATTTTCCGATCACTTACGGTTTACGCATGGCTATTTTTATATTGAgg > 5:374384/1‑138 (MQ=255) tCCAAACAAGAGGACTGACAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGATTGGGTATCTTCCATTTCATTCACCACATTTTCCGATCACTTACGGTTTACGCATGGCTATTTTTATATTGAg < 1:80354/137‑1 (MQ=255) ccAAACAAGAGGACTGCCAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGATTGGGTATCTTCCATTTCATTCACCACATTTTCCGATCACTTa > 8:442199/1‑106 (MQ=255) ccAAACAAGAGGACTGACAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGATTGGGTATCTTCCATTTCATTCACCACATTTTCCGATCACTTa < 7:442199/106‑1 (MQ=255) ccAAACAAGAGGACTGACAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGATTGGGTATCTTCCATTTCATTCACCACATTTTCCGATCACTTACGGTTTACGCATGGCTATTTTTATATTGa < 8:185641/135‑1 (MQ=255) ccAAACAAGAGGACTGACAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGATTGGGTATCTTCCATTTCATTCACCACATTTTCCGATCACTTACGGTTTACGCATGGCTATTTTTATATTGa > 7:185641/1‑135 (MQ=255) ccAAACAAGAGGACTGACAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGATTGGGTATCTTCCATTTCATTCACCACATTTTCCGATCACTTACGGTTTACGCATGGCTATTTTTATATTGAGGaa > 7:51441/1‑139 (MQ=255) ccAAACAAGAGGACTGACAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGATTGGGTATCTTCCATTTCATTCACCACATTTTCCGATCACTTACGGTTTACGCATGGCTATTTTTATATTGAGGaa > 5:367514/1‑139 (MQ=255) cAAGAGGACTGACAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGATTGGGTATCTTCCATTTCATTCACCACATTTTCCGATCACTTACGGTTTACGCATGGCTATTTTTATATTGAGGAATATag < 7:318844/139‑1 (MQ=255) agGACTGACAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGATTGGGTATCTTCCATTTCATTCACCACATTTTCCGATCACTTACGGTTTACGCATGGc < 5:35834/112‑1 (MQ=255) agGACTGACAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGATTGGGTATCTTCCATTTCATTCACCACATTTTCCGATCACTTACGGTTTACGCATGGCTATTTTTATATTGAGGAATATAGAGaa > 4:374954/1‑139 (MQ=255) gACAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGATTTGGTATCTTCCATTTCATTCACCACATTTTCCGATCACTTACGGTTTACGCATGGCTATTTTTATATTGAGGAATATAGAGAATCTGTc < 6:469872/139‑1 (MQ=255) aCAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGATTGGGTATCTTCCATTTCATTCACCACATTTTCCGATCACTTACGGTTTACGCATGGCTATTTTTATAtt < 8:200307/117‑1 (MQ=255) aCAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGATTGGGTATCTTCCATTTCATTCACCACATTTTCCGATCACTTACGGTTTACGCATGGCTATTTTTATAtt > 7:200307/1‑117 (MQ=255) aCAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGATTGGGTATCTTCCATTTCATTCACCACATTTTCCGATCACTTACGGTTTACGCATGGCTATTTTTATATTGAGGAata > 2:238920/1‑125 (MQ=255) aCAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGATTGGGTATCTTCCATTTCATTCACCACATTTTCCGATCACTTACGGTTTACGCATGGCTATTTTTATATTGAGGAata < 1:238920/125‑1 (MQ=255) aCAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGATTGGGTATCTTCCATTTCATTCACCACATTTTCCGATCACTTACGGTTTACGCATGGCTATTTTTATATTGAGGAATATAGAGAATCTGTcc > 8:311580/1‑139 (MQ=255) aCAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGATTGGGTATCTTCCATTTCATTCACCACATTTTCCGATCACTTACGGTTTACGCATGGCTATTTTTATATTGAGGAATATAGAGAATCTGTc < 2:386808/138‑1 (MQ=255) aCAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGATTGGGTATCTTCCATTTCATTCACCACATTTTCCGATCACTTACGGTTTACGCATGGCTATTTTTATATTGAGGAATATAGAGAATCTGTc < 3:257106/138‑1 (MQ=255) aCAGGCCCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGATTGGGTATCTTCCATTTCATTCACCACATTTTCCGATCACTTACGGTTTACGCATGGCTATTTTTATATTGAGGAATATAGAGAATCTGTc < 5:447974/138‑1 (MQ=255) | AACGAATGAACGAAAGCCTTTTTCCTCAATCGCCACCATATGATCTGTAAAATGCTTGCCGCGACCTTCTTTCAATTTTTTCAGGGCAAATATGCCGTAGTCTGTATACACTTTCCAAACAAGAGGACTGACAGGCTCAATAAATTGAGCAGTCAGTCCGTATTCCTGAAGAACCGATTGGGTATCTTCCATTTCATTCACCACATTTTCCGATCACTTACGGTTTACGCATGGCTATTTTTATATTGAGGAATATAGAGAATCTGTCC > CP006881/2688652‑2688920 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |