| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP006881 | 3,831,557 | G→A | intergenic (‑6/+90) | U712_19755 ← / ← U712_19760 | Transcription antiterminator LicT/Uncharacterized protein yxiP |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 3,831,557 | 0 | G | A | 98.3% | 420.9 / ‑2.1 | 119 | intergenic (‑6/+90) | U712_19755/U712_19760 | Transcription antiterminator LicT/Uncharacterized protein yxiP |
| Reads supporting (aligned to +/- strand): ref base G (1/1); new base A (56/60); total (57/62) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.52e-01 | |||||||||||
Only 100 of 119 total aligned reads displayed.
TGCGGGCTTCATCGACATCATCGCCGGACTTTTTCTGAAACGCGAGCCCCCTGCCCATGACGACCAATTCTTTCCCCTGTTCATTGACCACGCTGATCACATTATTGTTGATCACCTTCGCAATTTTCATGGCATGTCCCTCCAAATCTACTAAGAACAGACTATATCTTGATTGTACATTCTTTTTGTACTAGGTCAATATCATCAGGGAAAGACGGAAGCTGGTCAGTACAATTCACTCCGTACCTGCTGCCCGGGCTGTTTTT > CP006881/3831422‑3831687 | tGCGGGCTTCATCGACATCATCGCCGGACTTTTTCTGAAACGCGAGCCCCCTGCCCATGACGACCAATTCTTTCCCCTGTTCATTGACCACGCTGATCACATTATTGTTGATCACCTTCGCAATTTTCATGGCATATcc > 2:417485/1‑139 (MQ=255)tGCGGGCTTCATCGACATCATCGCCGGACTTTTTCTGAAACGCGAGCCCCCTGCCCATGACGACCAATTCTTTCCCCTGTTCATTGACCACGCTGATCACATTATTGTTGATCACCTTCGCAATTTTCATGGCATATcc > 8:167931/1‑139 (MQ=255) cTTCATCGACATCATCGCCGGACTTTTTCTGAAACGCGAGCCCCCTGCCCAGGACGACCAATTCTTTCCCCAGTTCATTGACCACGCTGATCACATTATTGTTGATCACCTTCGCAATTTTCATGGCATATCCCTCCaa < 4:279551/139‑1 (MQ=255) cATCGACATCATCGCCGTACTTTTTCTGAAACGCGAGCCCCCTGCACATGACGACCAATTCTTTCCACTGTTCATTGACCACGCTGATCACATTATTGTTGATCACCTTCGCAATTTTCATGGCATATCCCTCCAAAt < 1:68022/138‑1 (MQ=255) cATCGACATCATCGCCGGACTTTTTCTGAAACGCGAGCCCCCTGCCCATGACGACCAATTCTTTCCCCTGTTCATTGACCACGCTGATCACATTATTGTTGATCACCTTCGCAATTTTCATGGCATATCCCTCCAAAt < 7:157078/138‑1 (MQ=255) cATCGACATCATCGCCGGACTTTTTCTGAAACGCGAGCCCCCTGCCCATGACGACCAATTCTTTCCCCTGTTCATTGACCACGCTGATCACATTATTGTTGATCACCTTCGCAATTTTCATGGCATATCCCTCCAAAt < 6:139604/138‑1 (MQ=255) gACATCATCGCCGGACTTTTTCTGAAACGCGAGCCCCCTGCCCATGACGACCAATTCTTTCCCCTGTTCATTGACCACGCTGATCACATTATTTTTGATCACCTTCGCAATTTTCATGGCATATCCCTCCAAATctact < 3:148059/139‑1 (MQ=255) gACATCATCGCCGGACTTTTTCTGAAACGCGAGCCCCCTGCCCATGACGACCAATTCTTTCCCCTGTTCATTGACCACGCTGATCACATTATTGTTGATCACCTTCGCAATTTTCATGGCATATCCCTCCAAATctact < 7:252765/139‑1 (MQ=255) gACATCATCGCCGGACTTTTTCTGAAACGCGAGCCCCCTGCCCATGACGACCAATTCTTTCCCCTGTTCATTGACCACGCTGATCACATTATTGTTGATCACCTTCGCAATTTTCATGGCATATCCCTCCAAATctact < 1:464206/139‑1 (MQ=255) gACATCATCGCCGGACTTTTTCTGAAACGCGAGCCCCCTGCCCATGACGACCAATTCTTTCCCCTGTTCATTGACCACGCTGATCACATTATTGTTGATCACCTTCGCAATTTTCATGGCATATCCCTCCAAATctact < 8:28090/139‑1 (MQ=255) catcGCCGGACTTTTTCTGAAACGCGAGCCCCCTGCCCATGACGACCAATTCTTTCCCCTGTTCATTGACCACGCTGATCACATTATTGTTGATCACCTTCGCAATTTTCATGGCATATCCCTCCAAATCTACTAAGaa < 2:358227/139‑1 (MQ=255) atcGCCGGACTTTTTCTGAAACGCGAGCCCCCTGCCCATGACGACCAATTCTTTCCCCTGTTCATTGACCACGCTGATCACATTATTGTTGATCACCTTCGCAATTTTCATGGCATATCCCTCCAAATCTACTAAGaa < 8:397184/138‑1 (MQ=255) atcGCCGGACTTTTTCTGAAACGCGAGCCCCCTGCCCATGACGACCAATTCTTTCCCCTGTTCATTGACCACGCTGATCACATTATTGTTGATCACCTTCGCAATTTTCATGGCATATCCCTCCAAATCTACTAAGaa < 3:147542/138‑1 (MQ=255) atcGCCGGACTTTTTCTGAAACGCGAGCCCCCTGCCCATGACGACCAATTCTTTCCCCTGTTCATTGACCACGCTGATCACATTATTGTTGATCACCTTCGCAATTTTCATGGCATATCCCTCCAAATCTACTAAGaa < 5:378026/138‑1 (MQ=255) atcGCCGGACTTTTTCTGAAACGCGAGCCCCCTGCCCATGACGACCAATTCTTTCCCCTGTTCATTGACCACGCTGATCACATTATTGTTGATCACCTTCGCAATTTTCATGGCATATCCCTCCAAATCTACTAAGaa < 7:415847/138‑1 (MQ=255) atcGCCGGACTTTTTCTGAAACGCGAGCCCCCTGCCCATGACGACCAATTCTTTCCCCTGTTCATTGACCACGCTGATCACATTATTGTTGATCACCTTCGCAATTTTCATGGCATATCCCTCCAAATCTACTAAGAAc < 6:13919/139‑1 (MQ=255) atcGCCGGACTTTTTCTGAAACGCGAGCCCCCTGCCCATGACGACCAATTCTTTCCCCTGTTCATTGACCACGCTGATCACATTATTGTTGATCACCTTCGCAATTTTCATGGCATATCCCTCCAAATCTACTAAGAAc < 7:71977/139‑1 (MQ=255) atcGCCGGACTTTTTCTGAAACGCGAGCCCCCTGCCCATGACGACCAATTCTTTCCCCTGTTCATTGACCACGCTGATCACATTATTGTTGAGCACCTTCGCAATTTTCATGGCATATCCCTCCAAATCTACTAAGaa < 7:37245/138‑1 (MQ=255) atcGCCGGACTTTTTCTGAAACGAGAGCCCCCTGCCCATGACGACCAATTCTTTCCCCTGTTCATTGACCACGCTGATCACATTATTGTTGATCACCTTCGCAATTTTCATGGCATATCCCTCCAAATCTACTAAGaa < 4:77889/138‑1 (MQ=255) gCCGGACTTTTTCTGAAACGCGAGCCCCCTGCCCATGACGACCAATTCTTTCCCCTGTTCATTGACCACGCTGATCACATTATTGTTGATCACCTTCGCAATTTTCATGGCATATCCCTCCAAATCTACTAAGAACAg < 7:267170/138‑1 (MQ=255) ccGGACTTTTTCTGAAACGCGAGCCCCCTGGCCATGACGACCAATTCTTTCCCCTGTTCATTGACCACGCTGATCACATTATTGTTGATCACCTTCGCAATTTTCATGGCATATCCCTCCAAATCTACTAAGAACAGAc < 5:65973/139‑1 (MQ=255) ccGGACTTTTTCTGAAACGCGAGCCCCCTGCCCATGACGACCAATTCTTTCCCCTGTTCATTGACCACGCTGATCACATTATTGTTGATCACCTTCGCAATTTTCATGGCATATCCCTCCAAATCTACTAAGAACAGAc < 3:290079/139‑1 (MQ=255) ccGGACTTTTTCTGAAACGCGAGCCCCCTGCCCATGACGACCAATTCTTTCCCCTGTTCATTGACCACGCTGATCACATTATTGTTGATCACCTTCGCAATTTTCATGGCATATCCCTCCAAATCTACTAAGAACAGAc < 5:353076/139‑1 (MQ=255) cTTTTTCTGAAACGCGAGCCCCCTGCCCATGACGACCAATTCTTTCCCCTGTTCATTGACCACGCTGATCACATTATTGTTGATCACCTTCGCAATTTTCATGGCATATCCCTCCAAATCTACTAAGAACAGACTatat < 6:191090/139‑1 (MQ=255) tttCTGAAACGCGAGCCCCCTGCCCATGACGACCAATTCTTTCCCCTGTTCATTGACCACGCTGATCACATTATTGTTGATCACCTTCGCAATTTTCATGGCATATCCCTCCAAATCTACTAAGAACAGACTATATCt < 1:417485/138‑1 (MQ=255) cTGAAACGCGAGCCCCCTGCCCATGACGACCAATTCTTTCCCCTGTTCATTGACCACGCTGATCACATTATTGTTGATCACCTTCGCAATTTTCATGGCATATCCCTCCAAATCTACTAAGAACAGACTATATCTTGa < 6:492408/138‑1 (MQ=255) aaCGCGAGCCCCCTGCCCATGACGACCAATTCTTTCCCCTGTTCATTGACCACGCTGATCACATTATTGTTGATCACCTTCGCAATTTTCATGGCATATCCCTCCAAATCTACTAAGAACAGACTATATCTTGATTGTa < 6:316938/139‑1 (MQ=255) gcgAGCCCCCTGCCCATGACGACCAATTCTTTCCCCTGTTCATTGACCACGCTGATCACATTATTGTTGATCACCTTCGCAATTTTCATGGCATATCCCTCCAAATCTACTAAGAACAGACTATATCTTGATTGTACAt < 8:42461/139‑1 (MQ=255) gcgAGCCCCCTGCCCATGACGACCAATTCTTTCCCCTGTTCATTGACCACGCTGATCACATTATTGTTGATCACCTTCGCAATTTTCATGGCATATCCCTCCAAATCTACTAAGAACAGACTATATCTTGATTGTACAt < 3:331160/139‑1 (MQ=255) tGCCCATGACGACCAATTCTTTCCCCTGTTCATTGACCACGCTGATCACATTATTGTTGATCACCTTCGCAATTTTCATGGCATATCCCTCCAAATCTACTAAGAAc > 1:261799/1‑107 (MQ=255) tGCCCATGACGACCAATTCTTTCCCCTGTTCATTGACCACGCTGATCACATTATTGTTGATCACCTTCGCAATTTTCATGGCATATCCCTCCAAATCTACTAAGAAc < 2:261799/107‑1 (MQ=255) cccATGACGACCAATTCTTTCCCCTGTTCATTGACCATGCTGATCACATTATTGTTGATCACCTTCGCAATTTTCATGGCATATCCCTCCAAATCTACTAAGAACAGACTATATCTTGATTGTACATTCTTTTTGTAc < 8:456725/138‑1 (MQ=255) tGACGACCAATTCTTTACCCTGTTAATTGACCACGCTGATCACATTATTTTTGATAACCTTCGCAATTTTCATGGCATATCCCTCCAAATATACTAATCACAGACTATATCTTGATTGTACATTCTTTTTGTACTAGGt > 1:274115/1‑139 (MQ=255) acgacCAATTCTTTCCCCTGTTCATTGACCCCGCTGATCACATTATTGTTGATCACCTTCGCAATTTTCATGGCATATCCCTCCAAATCTACTAAGAACACACTATATCTTGATTGTACATTATTTTTGTACTAGGTc > 3:394669/1‑138 (MQ=255) acgacCAATTCTTTCCCCTGTTCATTGACCACGCTGATCACATTATTGTTGATCACCTTCGCAATTTTCATGGCATATCCCTCCAAATCTACTAAGAACAGACTATATCTTGATTGTACATTCTTTTTGTACTAGGTc > 6:448465/1‑138 (MQ=255) ccAATTCTTTCCCCTGTTCATTGACCACGCTGATCACATTATTGTTGATCACCTTCGCAATTTTCATGGCATATCCCTCCAAATCTACTAAGAACAGACTATATCTTGATTGTACATTCTTTTTGTACTAGGTCAatat > 7:37432/1‑139 (MQ=255) ccAATTCTTTCCCCTGTTCATTGACCACGCTGATCACATTATTGTTGATCACCTTCGCAATTTTCATGGCATATCCCTCCAAATCTACTAAGAACAGACTATATCTTGATTGTACATTCTTTTTGTACTAGGTCAata > 7:462868/1‑138 (MQ=255) aTTCTTTCCCCTGTTCATTGACCACGCTGATCACATTATTGTTGATCACCTTCGCAATTTTCATGGCATATCCCTCCAAATCTACTAAGAACAGACTATATCTTGATTGTACATTCTTTTTGTACTAGGTCAATatcat < 7:167931/139‑1 (MQ=255) aTTCTTTCCCCTGTTCATTGACCACGCTGATCACATTATTGTTGATCACCTTCGCAATTTTCATGGCATATCCCTCCAAATCTACTAAGAACAGACTATATCTTGATTGTACATTCTTTTTGTACTAGGTCAATatcat > 8:31712/1‑139 (MQ=255) tCCCCTGTTCATTGACCACGCTGATCACATTATTGTTGATCACCTTCGCAATTTTCATGGCATATCCCTCCAAATCTACTAAGAACAGACTATATCTTGATTGTACATTCTTTTTGTACTAGGTCAATATCATCAggg > 1:183621/1‑138 (MQ=255) tGTTCATTGACCACGCTGATCACATTATTGTTGATCACCTTCGCAATTTTCATGGCATATCCCTCCAAATCTACTAAGAACAGACTATATCTTGATTGTACATTCTTTTTGTACTAGGTCAATATCATCAGGGAAAGAc > 3:220604/1‑139 (MQ=255) gTTCATTGACCACGCTGATCACATTATTGTTGATCACCTTCGCAATTTTCATGGCATATCCCTCCAAATCTACTAAGAACAGACTATATCTTGa > 3:108234/1‑94 (MQ=255) gTTCATTGACCACGCTGATCACATTATTGTTGATCACCTTCGCAATTTTCATGGCATATCCCTCCAAATCTACTAAGAACAGACTATATCTTGa < 4:108234/94‑1 (MQ=255) gTTCATTGACCACGCTGATCACATTATTGTTGATCACCTTCGCAATTTTCATGGCATATCCCTCCAAATCTACTAAGAACAGACTATATCTTGATTGTACATTCTTTTTGTACTAGGTCAATATCATCAGGGAAAGACg > 3:315419/1‑139 (MQ=255) gTTCATTGACCACGCTGATCACATTATTGTTGATCACCTTCGCAATTTTCATGGCATATCCCTCCAAATCTACTAAGAACAGACTATATCTTGATTGTACATTCTTTTTGTACTAGGTCAATATCATCAGGGAAAGACg > 5:443762/1‑139 (MQ=255) aTTGACCACGCTGATCACATTATTGTTGATCACGTTCGCTATTTTCATGGCTTATCCCTCCAAATCTACTAAGAACAGACTATATCTTGATTGTACATTCTTTTTGTACTAGGTCAATATCATCAGGGAAAGACGGAAg < 2:159384/139‑1 (MQ=255) aTTGACCACGCTGATCACATTATTGTTGATCACCTTCGCAATTTTCATGGCATATCCCTCCAAATCTACTAAGAACATACTATATCTTGATTGTACATTCTTTTTGTACTAGGTCAATATCATCAGGGAAAGACGGAAg < 3:250801/139‑1 (MQ=255) aTTGACCACGCTGATCACATTATTGTTGATCACCTTCGCAATTTTCATGGCATATCCCTCCAAATCTACTAAGAACAGAc < 7:347960/80‑1 (MQ=255) aTTGACCACGCTGATCACATTAATGTTGATCACCTTCGCAATTTTCATGGCATATCCCTCCAAATCTACTAAGAACAGACTATATCTTGATTGTACATTCTTTTTGTACTAGGTCAATATCATCAGGGAAAGACGGAAg < 2:318471/139‑1 (MQ=255) tGACCACGCTGATCACATTATTGTTGATCACCTTCGCAATTTTCATGGCATATCCCTCCAAATctact < 3:392814/68‑1 (MQ=255) tGACCACGCTGATCACATTATTGTTGATCACCTTCGCAATTTTCATGGCATATCCCTCCAAATctact > 4:392814/1‑68 (MQ=255) tGACCACGCTGATCACATTATTGTTGATCACCTTCGCAATTTTCATGGCATATCCCTCCAAATCTACTAAGAACAGACTATATCTTGATTGTACATTCTTTTTGTACTAGGTCAATATCATCAGGGAAAGCCGGAAGCt > 3:448695/1‑139 (MQ=255) tGACCACGCTGATCACATTATTGTTGATCACCTTCGCAATTTTCATGGCATATCCCTCCAAATCTACTAAGAACAGACTATATCTTGATTGTACATTCTTTTTGTACTAGGTCAATATCATCAGGGAAAGACGGAAGCt > 1:212175/1‑139 (MQ=255) gACCACGCTGATCACATTATTGTTGATCACCTTCGCAATTTTCATGGCATAGCCCTCCAAATCTACTAAGAACAGACTATATCTTGATTGTACATTCTTTTTGTACTAGGTCAATATCTTCAGGGAAAGACGGAAGCTg < 2:211834/139‑1 (MQ=255) ccACGCTGATCACATTATTGTTGATCACCTTCGCAATTTTCATGGCATATCCCTCCAAATCTACTAAGAACAGACTATATCTTGATTGTACATTCTTTTTGTACTAGGTCAATATCATCAGGGAAAGACGGAAGCTGGt < 3:80659/139‑1 (MQ=255) ccACGCTGATCACATTATTGTTGATCACCTTCGCAATTTTCATGGCATATCCCTCCAAATCTACTAAGAACAGACTATATCTTGATTGTACATTCTTTTTGTACTAGGTCAATATCATCAGGGAAAGACGGAAGCTGGt < 2:437047/139‑1 (MQ=255) ccACGCTGATCACATTATTGTTGATCACCTTCGCAATTTTCATGGCATATCCCTCCAAATCTACTAAGAACAGACTATATCTTGATTGTACATTCTTTTTGTACTAGGTCAATATCATCAGGGAAAGACGGAAGCTGGt < 3:244000/139‑1 (MQ=255) agacaggATCAATTTTTTGTTGATCACCTTCGCTATTTTCATGGAATTTCCCTCCAATTCTACTTATAACTTATTTTATCTTTATTGTAAATTCTTTTTGTAGTAGGTCAATTTCATCAGGGATAGACGGAAGCTGGt < 2:203318/132‑1 (MQ=255) aCGCTGATCACATTATTGTTGATCACCTTCGCAATTTTCATGGCATATCCCTCCAAATCTACTAAGAACAGACTATATCTTGATTGTACATTCTTTTTGTACTAGGTCAATATCATCAGGGAAAGACGGAAGCTGGt > 7:422187/1‑137 (MQ=255) gCTGATCACATTATTGTTGATCACCTTCGCAATTTTCATGGCATATCCCTCCAAATCTACTAAGAACAGACTATATCTTGATTGTACATTCTTTTTGTACTAGGTCAATATCATCAGGGAAAGACGGAAGCTGGTCAg > 4:165635/1‑138 (MQ=255) tCACATTATTGTTGATCACCTTCGCAATTTTCATGGCATATCCCTCCAAATCTACTAAGAACAGACTATATCTTGATTGTACATTCTTTTTGTACTAGGTCAATATCATCAGGGAAAGACGGAAGCTGGTCAGTACAAt > 2:450663/1‑139 (MQ=255) cacaTTATTGTTGATCACCTTCGCAATTTTCATCGCATAGCCCTCCAAATCAAATAATAACAGACTATATCTTGATTGTACATTCTTTTTGTACTAGGTCAATATCATCAGGCAAAGTCGGAAGCTGGTCAGTACAAtt < 2:119968/139‑1 (MQ=255) attattGTTGATCACCTTCGCAATTTTCATGGCATATCCCTCCAAATCTACTAAGAACAGACTATATCTTGATTGTACATTCTTTTTGTACTAGGTCAATATCATCAGGGAAAGACGGAAGCTGGTCAGTACAATTCAc > 7:261844/1‑139 (MQ=255) attattGTTGATCACCTTCGCAATTTTCATGGCATATCCCTCCAAATCTACTAAGAACAGACTATATCTTGATTGTACATTCTTTTTGTACTAGGTCAATATCATCAGGGAAAGACGGAAGCTGGTCAGTACAATTCAc < 3:179438/139‑1 (MQ=255) attattGTTGATCACCTTCGCAATTTTCATGGCATATCCCTCCAAATCTACTAAGAACAGACTATATCTTGATTGTACATTCTTTTTGTACTAGGTCAATAACAACAGGTAAACACGGAACCTGGTCAGTACAAtaaaa > 7:444895/1‑135 (MQ=255) ttattGTTGATCACCTTCGCAATTTTCAGGGCAGATCCCTCCACCTCTACTACGAACTGACTATATCTTGATTGTACATTCTTTTTGTACTTGGTCAATATCATCTGGGAAAGACGGAAGCTGGGCAGTACAATTCACt < 2:389218/139‑1 (MQ=255) tgttgATCACCTTCGCAATTTTCATGGCATGTCCCTCCAAATCTACTAAGAACAGACTATATCTTGATTGTACATTCTTTTTGTAc > 4:230996/1‑86 (MQ=255) tgttgATCACCTTCGCAATTTTCATGGCATGTCCCTCCAAATCTACTAAGAACAGACTATATCTTGATTGTACATTCTTTTTGTAc < 3:230996/86‑1 (MQ=255) tgttgATCACCTTCGCAATTTTCATGGCATATCCCTCCAAATCTACTAATAACAGACTATATCTTGATTGTACATTCTTTTTGTAATAGGTCAATATCATCAGGGAAAGACGGAAGATGGTCAGTACAATTCACTCCg > 5:224488/1‑138 (MQ=255) tgttgATCACCTTCGCAATTTTCATGGCATATCCCTCCAAATCTACTAAGAACAGACTATATCTTGATTGTACAt > 2:350498/1‑75 (MQ=255) tgttgATCACCTTCGCAATTTTCATGGCATATCCCTCCAAATCTACTAAGAACAGACTATATCTTGATTGTACAt < 1:350498/75‑1 (MQ=255) tgttgATCACCTTCGCAATTTTCATGGCATATCCCTCCAAATCTACTAAGAACAGACTATATCTTGATTGTACATTCTTTTTGTACTAGGTCAATATCATCAGGGAAAGACGGAAGCTGGTCAGTa < 2:362832/126‑1 (MQ=255) tgttgATCACCTTCGCAATTTTCATGGCATATCCCTCCAAATCTACTAAGAACAGACTATATCTTGATTGTACATTCTTTTTGTACTAGGTCAATATCATCAGGGAAAGACGGAAGCTGGTCAGTa > 1:362832/1‑126 (MQ=255) tgttgATCACCTTCGCAATTTTCATGGCATATCCCTCCAAATCTACTAAGAACAGACTATATCTTGATTGTACATTCTTTTTGTACTAGGTCAATATCATCAGGGAAAGACGGAAGCTGGTCAGTACAATTCACTCCg > 2:45711/1‑138 (MQ=255) ttgATCACCTTCGCAATTTTCATGGCATATCCCTCCAAATCTACTAAGAACAGACTATATCTTGATTGTACATTCTTTTTGTACTAGGTCAATATCATCAGGGAAAGACGGAAGCTGGTCAGTACAATTCACTCCGTAc > 7:218931/1‑139 (MQ=255) aTCACCTTCGCAATTTTCATGGCATATCCCTCCAAATCTACTAAGaa > 2:362521/1‑47 (MQ=255) aTCACCTTCGCAATTTTCATGGCATATCCCTCCAAATCTACTAAGaa < 1:362521/47‑1 (MQ=255) aTCACCTTCGCAATTTTCATGGCATATCCCTCCAAATCTACTAAGCACAGACTATATCTTGATTGTACATTCTTTTTGTACTAGGTCAATATCATCAGGGAAAGACGGAAGCTGGTCAGTACAATTCACTCCGTACctg > 1:389218/1‑139 (MQ=255) aTCACCTTCGCAATTTTCATGGCATATCCCTCCAAATCTACTAAGAACAGACTATATCTTGATTGTACATTCTTTTTGTACTAGGTCAGTATCATCAGGGAAAGACGGAAGCTGGTCAGTACAATTCACTCCGTACctg > 6:264223/1‑139 (MQ=255) aTCACCTTCGCAATTTTCATGGCATATCCCTCCAAATCTACTAAGAACAGACTATATCTTGATTGTACATTCTTTTTGTACTAGGTCAATATCATCAGGGa > 7:227356/1‑101 (MQ=255) aTCACCTTCGCAATTTTCATGGCATATCCCTCCAAATCTACTAAGAACAGACTATATCTTGATTGTACATTCTTTTTGTACTAGGTCAATATCATCAGGGa < 8:227356/101‑1 (MQ=255) aTCACCTTCGCAATTTTCATGGCATATCCCTCCAAATCTACTAAGAACAGACTATATCTTGATTGTACATTCTTTTTGTACTAGGTCAATATCATCAGGGAAAGACGGAAg > 8:173578/1‑111 (MQ=255) aTCACCTTCGCAATTTTCATGGCATATCCCTCCAAATCTACTAAGAACAGACTATATCTTGATTGTACATTCTTTTTGTACTAGGTCAATATCATCAGGGAAAGACGGAAg < 7:173578/111‑1 (MQ=255) aTCACCTTCGCAATTTTCATGGCATATCCCTCCAAATCTACTAAGAACAGACTATATCTTGATTGTACATTCTTTTTGTACTAGGTCAATATCATCAGGGAAAGACGGAAGCTGGTCAGt < 8:270730/120‑1 (MQ=255) aTCACCTTCGCAATTTTCATGGCATATCCCTCCAAATCTACTAAGAACAGACTATATCTTGATTGTACATTCTTTTTGTACTAGGTCAATATCATCAGGGAAAGACGGAAGCTGGTCAGTACAATTCACTCCGTACctg > 1:210243/1‑139 (MQ=255) aTCACCTTCGCAATTTTCATGGCATATCCCTCCAAATCTACTAAGAACAGACTATATCTTGATTGTACATTCTTTTTGTACTAGGTCAATATCATCAGGGAAAGACGGAAGCTGGTCAGTACAATTCACTCCGTACctg > 8:466270/1‑139 (MQ=255) aTCACCTTCGCAATTTTCATGGCATATCCCTCCAAATCTACTAAGAACAGACTATATCTTGATTGTACATTCTTTTTGTACTAGGTCAATATCATCAGGGAAAGACGGAAGCTGGTCAGTACAATTCACTCCGTACctg > 2:16308/1‑139 (MQ=255) aTCACCTTCGCAATTTTCATGGCATATCCCTCCAAATCTACTAAGAACAGACTATATCTTGATTGTACATTCTTTTTGTACTAGGTCAATATCATCAGGGAAAGACGGAAGCTGGTCAGTACAATTCACTCCGTACctg > 3:136320/1‑139 (MQ=255) aTCACCTTCGCAATTTTCATGGCATATCCCTCCAAATCTACTAAGAACAGACTATATCTTGATTGTACATTCTTTTTGTACTAGGTCAATATCATCAGGGAAAGACGGAAGCTGGTCAGTACAATTCACTCCGTACctg > 1:107814/1‑139 (MQ=255) aTCACCTTCGCAATTTTCATGGCATATCCCTCCAAATCTACTAAGAACAGACTATATCTTGATTGTACATTCTTTTTGTACTAGGTCAATATCATCAGGGAAAGACGGAAGCTGGTCAGTACAATTCACTCCGTACctg > 4:224832/1‑139 (MQ=255) aTCACCTTCGCAATTTTCATGGCATATCCCTCCAAATCTACTAAGAACAGACTATATCTTGATTGTACATTCTTTTTGTACTAGGTCAATATCATCAGGGAAAGACGGAAGCTGGTCAGTACAATTCACTCCGTACctg > 5:221890/1‑139 (MQ=255) aTCACCTTCGCAATTTTCATGGCATATCCCTCCAAATCTACTAAGAACAGACTATATCTTGATTGTACATTCTTTTTGTACTAGGTCAAAATCATCAGGGAAAGACGGAAGCTGGTCAGTACAATTCACTCCGTACctg > 8:30078/1‑139 (MQ=255) cACCTTCGCAATTTTCATGGCATATCCCTCCAAATCTACTAAGAACAGACTATATCTTGATTGTACATTCTTTTTGTACTAGGTCAATATCATCAGGGAAAGACGGAAGCTGGTCAGTACAAtt > 3:26104/1‑124 (MQ=255) cACCTTCGCAATTTTCATGGCATATCCCTCCAAATCTACTAAGAACAGACTATATCTTGATTGTACATTCTTTTTGTACTAGGTCAATATCATCAGGGAAAGACGGAAGCTGGTCAGTACAAtt < 4:26104/124‑1 (MQ=255) tCGCAATTTTCATGGCATATCCCTCCAAATCTACTAAGAACAGACTATATCTTGATTGTACATTCTTTTTGTACTAgg < 1:48914/78‑1 (MQ=255) tCGCAATTTTCATGGCATATCCCTCCAAATCTACTAAGAACAGACTATATCTTGATTGTACATTCTTTTTGTACTAgg > 2:48914/1‑78 (MQ=255) tCGCAATTTTCATGGCATATCCCTCCAAATCTACTAAGAACAGACTATATCTTGATTGTACATTCTTTTTGTACTAGGTCAATATCATCAGGGAAAGACGGAAg > 7:461788/1‑104 (MQ=255) tCGCAATTTTCATGGCATATCCCTCCAAATCTACTAAGAACAGACTATATCTTGATTGTACATTCTTTTTGTACTAGGTCAATATCATCAGGGAAAGACGGAAg < 8:461788/104‑1 (MQ=255) ttCATGGCATATCCCTCCAAATCTACTAAGAACAGACTATATCTTGATTGTACATTCTTTTTGTACTAGGTCAATATCATCAGGGAAAGACGGAAGCTGGTCAGTACAATTCACTCCGTACCTGCTGCCCGGGCTGttt > 5:216656/1‑139 (MQ=255) aTGGCATATCCCTCCAAATCTACTAAGAACAGACTATATCTTGATTGTACATTCTTTTTGTACTAGGTCAATATCATCAGGGAAAGACGGAAGCTGGTCAGTACAATTCACTCCGTACCTGCTGCCCGGGCTGttttt > 3:123554/1‑138 (MQ=255) | TGCGGGCTTCATCGACATCATCGCCGGACTTTTTCTGAAACGCGAGCCCCCTGCCCATGACGACCAATTCTTTCCCCTGTTCATTGACCACGCTGATCACATTATTGTTGATCACCTTCGCAATTTTCATGGCATGTCCCTCCAAATCTACTAAGAACAGACTATATCTTGATTGTACATTCTTTTTGTACTAGGTCAATATCATCAGGGAAAGACGGAAGCTGGTCAGTACAATTCACTCCGTACCTGCTGCCCGGGCTGTTTTT > CP006881/3831422‑3831687 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |