| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP006881 | 3304613 = | 0 (0.000) | 31 (0.020) +ACTGCGTCAATACACGTTGACACTCTTTTGAAAGTGTGTTAAATTATCAG |
19/132 | NT | 94.0% | intergenic (+1/+48) | U712_16995/U712_17000 | Arabinose metabolism transcriptional repressor/Uncharacterized protein yvbT |
| ? | pSIJ663_pHT315_araE_xy | 9781 = | 7 (0.000) | intergenic (+5050/–) | ampR/– | –/– | |||||
GCTGGCACGACAGGTTTCCCGACTGGAAAGCGGGCAGTGAGCGCAACGCAATTAATGTGAGTTAGCTCACTCATTAGGCACCCCAGGCGTTAAGATGGCAAGCTTGACAAGTATTTCCGACACATTTAAAATGAAGTTTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGGCGGCTTATTGTA > pSIJ663_pHT315_araE_xy/9643‑9914 | ttcgtttgaaatcctcgctgacgtttggaaaaacagataacagctataaaaaaagcaatgtagcggggagacccatacattgctttttactgcgtcaatacacgttgacactcttttgaaagtgtgttaaattatcagt < 1:293307‑M2/1‑1 (MQ=255)ttcgtttgaaatcatcgctgacgtttggaaaaacagataacagctataaaaaaagcaatgtagcggggagacccatacattgctttttactgcgtcaatacacgttgacactcttttgaaagtgtgttaaattatcagt > 3:84634‑M2/139‑139 (MQ=255)ttcgtttgaaatcatcgctgacgtttggaaaaacagataacagctataaaaaaagcaatgtagcggggagacccatacattgctttttactgcgtcaatacacgttgacactcttttgaaagtgtgttaaattatcagt > 7:301565‑M2/139‑139 (MQ=255)ttcgtttgaaatcatcgctgacgtttggaaaaacagataacagctataaaaaaagcaatgtagcggggagacccatacattgctttttactgcgtcaatacacgttgacactcttttgaaagtgtgttaaattatcagt < 1:344045‑M2/1‑1 (MQ=255)ttcgtttgaaatcatcgctgacgtttggaaaaacagataacagctataaaaaaagcaatgtagcggggagacccatacattgctttttactgcgtcaatacacgttgacactcttttgaaagtgtgttaaattatcagt > 3:396343‑M2/139‑139 (MQ=255) cgtttgaaatcatcgctgacgtttggaaaaacagataacagctataaaaaaagcaatgtagcggggagacacatacattgctttttactgcgtcaatacacgttgacactcttttgaaagtgtgttaaattatcagTGa > 2:338975‑M2/137‑139 (MQ=255) gtttgaaatcatcgctgacgtttggaaaaacagataacagctataaaaaaagcaatgtagcggggagacccatacattgctttttactgcgtcaatacacgttgacactcttttgaaagtgtgttaaattatcagTGAc < 2:331299‑M2/4‑1 (MQ=255) gtttgaaatcatcgctgacgtttggaaaaacagataacagctataaaaaaagcaatgtagcggggagacccatacattgctttttactgcgtcaatacacgttgacactcttttgaaagtgtgttaaattatcagTGAc < 2:408848‑M2/4‑1 (MQ=255) tcatcgctgacgtttggaaaaacagataacagctataaaaaaagcaatgtagcggggagacccatacattgctttttactgcgtcaatacacgttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAgg < 8:393830‑M2/12‑1 (MQ=255) aGGTTTCCCGACTGGAAAGCGGGCAGTGAGCGCAACGCAATTAATGTGAGTTAGCTCACTCATTAGGCACCCCAGGCGTTAAGATGGCAAGCTTGACAAGTATTTCCGACACATTTAAAATGAAGTTTGACATGAAAgg < 5:135100/139‑1 (MQ=255) cgtttggaaaaacagataacagctataaaaaaagcaatgtagcggggagacccatacattgctttttactgcgtcaatacacgttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGa < 3:323190‑M2/22‑1 (MQ=255) aaaaacagataacagctataaaaaaagcaatgtagcggggagacccatacattgctttttactgcgtcaatacacgttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATg > 5:30348‑M2/111‑137 (MQ=255) aGCGGGCAGTGAGCGCAACGCAATTAATGTGAGTTAGCTCACTCATTAGGCACCCCAGGCGTTAAGATGGCAAGCTTGACAAGTATTTCCGACACATTTAAAATGAAGTTTGACATGAAAGGAAGTATTTGAAAATg > 5:387352/1‑137 (MQ=255) aacagataacagctataaaaaaagcaatgtagcggggagacccatacattgctttttactgcgtcaatacacgttgacactctttttaaagtgtgttaaattatcagTGACATTAAAGGAAGTATTTTAAAATtaagaa < 4:202816‑M2/32‑1 (MQ=255) gctataaaaaaagcaatgtagcggggagacccatacattgctttttactgcgtcaatacacgttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACt > 3:302734‑M2/97‑138 (MQ=255) caacgcaaTTAATGTGAGTTAGCTCACTCATTAGGCACCCCAGGCGTTAAGATGGCAAGCTTGACAAGTATTTCCGACACATTTAAAATGAAGTTTGACATGAAAGGAAGTATTTGAAAATGAAGAAAACTCCAACTc > 8:278399/1‑138 (MQ=255) taaaaaaagcaatgtagcggggagacccatacattgctttttactgcgtcaatacacgttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAAtt > 3:56186‑M2/93‑139 (MQ=255) aaaagcaatgtagcggggagacccatacattgctttttactgcgtcaatacacgttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGaa < 4:302734‑M2/51‑1 (MQ=255) agcaatgtagcggggagacccatacattgctttttactgcgtcaatacacgttgacactcttttgaaagtgtgttatattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCATTTAGAAcc > 1:437903‑M2/86‑138 (MQ=255) agcaatgtagcggggagacccatacattgctttttactgcgtcaatacacgttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAAcc > 1:103089‑M2/86‑138 (MQ=255) agcaatgtagcggggagacccatacattgctttttactgcgtcaatacacgttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAAcc > 3:227313‑M2/86‑138 (MQ=255) aGTTAGCTCACTCATTAGGCACCCCAGGCGTTAAGATGGCAAGCTTGACAAGTATTTCCGACACATTTAAAATGAAGTTTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGtt > 3:114572/1‑139 (MQ=255) gggagacccatacattgctttttactgcgtcaatacacgttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGt > 1:70427‑M2/74‑138 (MQ=255) agacccatacattgctttttactgcgtcaatacacgttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAAc > 4:36396‑M2/71‑138 (MQ=255) agacccatacattgctttttactgcgtcaatacacgttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAAc > 3:176634‑M2/71‑138 (MQ=255) acccatacattgctttttactgcgtcaatacacgttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGATCCAAATGTTCCTGTAAc > 1:379348‑M2/69‑136 (MQ=255) acccatacattgctttttactgcgtcaatacacgttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAAc > 3:328073‑M2/69‑136 (MQ=255) acccatacattgctttttactgcgtcaatacacgttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAAc > 5:445714‑M2/69‑136 (MQ=255) acccatacattgctttttactgcgtcaatacacgttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAAc > 3:64807‑M2/69‑136 (MQ=255) catacattgctttttactgcgtcaatacacgttgacacttttttgaaattgtgttaaattatcagTGACATGAATGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACaagaag < 5:381126‑M2/74‑1 (MQ=255) tacattgctttttactgcgtcaatacacgttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGc > 5:416427‑M2/64‑138 (MQ=255) gacaggctttttactgcgtcaatacactttgacactcttttgaatgtgttttaaattttcagTGACATTAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCa < 4:364472‑M2/77‑1 (MQ=255) tgctttttactgcgtcaatacacgttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGa > 3:101537‑M2/59‑80 (MQ=255) tgctttttactgcgtcaatacacgttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGa < 4:101537‑M2/22‑1 (MQ=255) tgctttttactgcgtcaatacacgttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAAt < 3:179738‑M2/46‑1 (MQ=255) tgctttttactgcgtcaatacacgttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAAt > 4:179738‑M2/59‑104 (MQ=255) tgctttttactgcgtcaatacacgttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTc > 4:432392‑M2/59‑138 (MQ=255) tgctttttactgcgtcaatacacgttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTc > 6:300599‑M2/59‑138 (MQ=255) ccccAGGCGTTAAGATGGCAAGCTTGACAAGTATTTCCGACACATTTAAAATGAAGTTTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTc > 8:102968/1‑138 (MQ=255) ctttttactgcgtcaatccccgttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATCAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAAt < 4:91391‑M2/83‑1 (MQ=255) ctttttactgcgtcaatacacgttgacactcttttgaatgtgtgttaaattatcagTGACATGAAAGGAAGTATTTGATAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAAt > 2:72890‑M2/57‑139 (MQ=255) ctttttactgcgtcaatacacgttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAAt > 4:231701‑M2/57‑139 (MQ=255) ctttttactgcgtcaatacacgttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTCAAAATGACGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCaa < 3:408599‑M2/82‑1 (MQ=255) cttattactgcgtaaatacacgttgacactcttttgaaagtgtgttaaattataagTGACATGAAAAGAAGTATTTGAAAATGAAGAATACTCAAACACAATTAGAACCAAATGTTCATCTAACAAGAAACCATTCAAt > 6:79385‑M2/57‑139 (MQ=255) tttactgcgtcaatacacgttgacactcttttgaaagtgtgttaaattatcagTGAAATGAAAGGTAGTATTTTAAATTGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATgg < 1:338975‑M2/85‑1 (MQ=255) actgggtcaatacacgttgaaactcttttgaatgtgtttaaaattatcagTCACATGAAAGCAATTATTTGAAAATGAACAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGAt < 4:227313‑M2/88‑1 (MQ=255) actgcgtcaatacacgttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGAt < 2:103089‑M2/88‑1 (MQ=255) aaGATGGCAAGCTAGACAAGTATTTCCGACACATTTAAAATCAAGTTTGACATGAAAGCAAGAATTAGAAAATGAAGCATACTCCAACTCAAGTAGAACCAAATCTTCCTCTAACAAGAAGCCATTCAATGGGATTTg > 4:390356/1‑138 (MQ=25) cgtcaatacacgttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGa < 1:192628‑M2/22‑1 (MQ=255) cgtcaatacacgttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGa > 2:192628‑M2/47‑68 (MQ=255) cgtcaatacacgttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTGGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGt > 5:19027‑M2/47‑138 (MQ=255) cgtcaatacacgttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCaa > 5:339130‑M2/47‑128 (MQ=255) cgtcaatacacgttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCaa < 6:339130‑M2/82‑1 (MQ=255) cgtcaatacacgttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGt > 1:400806‑M2/47‑138 (MQ=255) cgtcaatacacgttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGt > 7:68147‑M2/47‑138 (MQ=255) cgtcaatacacgttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATCTGTc > 3:364472‑M2/47‑139 (MQ=255) gtcaatacacgttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCa > 7:438061‑M2/46‑139 (MQ=255) aatacacgttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCAtt < 3:36396‑M2/96‑1 (MQ=255) caggtggacactcttttgaatgtgtgttaaattatcagGCCCATGAAAGGAAGTATTTCAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGAt < 2:125982‑M2/101‑1 (MQ=255) cacgttgacactcttttgtatgtttgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAACAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGAt < 7:368587‑M2/101‑1 (MQ=255) cgttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATCTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGAtct > 5:238684‑M2/37‑139 (MQ=255) gttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGAtctc < 2:70427‑M2/104‑1 (MQ=255) gttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGAtct > 1:246114‑M2/36‑138 (MQ=255) gttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTGGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACa > 4:324030‑M2/36‑104 (MQ=255) gttgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTGGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACa < 3:324030‑M2/69‑1 (MQ=255) tgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCAt > 8:341940‑M2/34‑139 (MQ=255) tgacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCAt > 2:363937‑M2/34‑139 (MQ=255) gacactcttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGTAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTACCAAGAGGCCATTCAATGGGATTTGTCATTTTGATCTCAtg > 6:9613‑M2/33‑139 (MQ=255) tATTTCCGACACATTAAAAATGATGTTTGACTTGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAATCCATTCAATGGGATTTGTCATTTTGATCTCATGTgcgg < 3:390356/139‑1 (MQ=255) ttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACaagaag < 5:441101‑M2/74‑1 (MQ=255) ttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACaagaag > 6:441101‑M2/26‑99 (MQ=255) ttttgaaagtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTgcggcg > 1:224131‑M2/26‑139 (MQ=255) ttgaacgtttgttaaattatcagTGACATGAAAGGAAGTATTTGAATATTAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGcggcgg < 4:328073‑M2/115‑1 (MQ=255) ttgaaagtgtgttaaattataagTGAAATGAAAGGAAGTATTTGAAAAAGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCAATCAATGGGATTTGTCATTTTGATCTCATgtgcggcgct > 8:152725‑M2/24‑137 (MQ=255) agtgtgtaaaattatcagTCACATGAAAGGAAGTATTTTAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTg < 5:12027‑M2/121‑1 (MQ=255) gtgttttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTACTGTAACAAGAAGCCATTCAATGCTAATTGTCATGTTGATCTCATGTGCGGCGGGGCTTgg > 4:386778‑M2/18‑139 (MQ=255) gtgtgttaaattatcagTGACATGAAAGGAAGTATTTTAAAATTAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTgg < 6:446139‑M2/122‑1 (MQ=255) gtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGTGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTgg > 4:272760‑M2/18‑139 (MQ=255) gtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCTGCGGGGCTTgg > 7:174020‑M2/18‑139 (MQ=255) gtgtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCAATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTgg > 1:74073‑M2/18‑139 (MQ=255) gtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTggcg > 1:293140‑M2/16‑139 (MQ=255) gtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTggcg > 8:370915‑M2/16‑139 (MQ=255) gtgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTggcg > 5:259636‑M2/16‑139 (MQ=255) tgttaaattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTggcg < 7:341940‑M2/124‑1 (MQ=255) taaattatcagTGACATTAAATGAAGTATTTTAAAATGACCAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGGCGGCt < 1:286289‑M2/127‑1 (MQ=255) taaattatcagTGACATGAAAGGAAGTATTTTAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGGCGGCt < 5:413647‑M2/127‑1 (MQ=255) taaattatcagTGAAATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGGCGGCt < 8:161027‑M2/127‑1 (MQ=255) taaattaacagTTACATTAAATGAAGTATTTCAAAATTAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTTTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGGCGGCt < 6:259636‑M2/127‑1 (MQ=255) taaataatcagTGACATTAACCGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGGCGGCt < 7:152725‑M2/127‑1 (MQ=255) aattatcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGGCGGCTTa < 2:400806‑M2/129‑1 (MQ=255) atcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGGCGGCTTATTGt < 2:246114‑M2/133‑1 (MQ=255) atcagTCACATTAAAGTAATTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGGCGGCTTATTGt < 1:49407‑M2/133‑1 (MQ=255) ataagTTACATGAAAGTAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGGCGGCTTATTGt < 6:30348‑M2/133‑1 (MQ=255) aaGTTTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACTAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGGCGGCTTATTGt < 6:387352/138‑1 (MQ=255) aaGTTTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGGCGTCTTATTGTa > 1:254003/1‑139 (MQ=255) aaGTTTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGGCGGCTTATTGt < 4:114572/138‑1 (MQ=255) tcagTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGGCGGCTTATTGTa < 7:370915‑M2/134‑1 (MQ=255) | GCTGGCACGACAGGTTTCCCGACTGGAAAGCGGGCAGTGAGCGCAACGCAATTAATGTGAGTTAGCTCACTCATTAGGCACCCCAGGCGTTAAGATGGCAAGCTTGACAAGTATTTCCGACACATTTAAAATGAAGTTTGACATGAAAGGAAGTATTTGAAAATGAAGAATACTCCAACTCAATTAGAACCAAATGTTCCTGTAACAAGAAGCCATTCAATGGGATTTGTCATTTTGATCTCATGTGCGGCGGGGCTTGGCGGCTTATTGTA > pSIJ663_pHT315_araE_xy/9643‑9914 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |