| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP006881 | 974,428 | G→T | 5.1% | intergenic (‑168/‑33) | U712_04760 ← / → U712_04765 | Uncharacterized protein yhdB/Uncharacterized protein yhdC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 974,428 | 0 | G | T | 5.1% | 297.5 / 3.1 | 89 | intergenic (‑168/‑33) | U712_04760/U712_04765 | Uncharacterized protein yhdB/Uncharacterized protein yhdC |
| Reads supporting (aligned to +/- strand): ref base G (44/40); new base T (2/3); total (46/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.70e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.74e-01 | |||||||||||
TTCATGATTAGTTTATGCCGCATCCTCTGTTATTGACGGGGCAAAACTTGCCGTCTGCGTCAGTAAAGGGGTAGCAATATGAGGGAGACATAAAATCAAAATGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGAGGGAATATATTCTGGGTACAGGAGACTGAAAAAATGAAATCCCTGCCGTATACCATCGCACTTCTTTTTTGCGGATTGATTATCGTGTCAATGGCTGCAAAAGGTCATTCAACGGACACAGACGAGTCCGTTCAA > CP006881/974290‑974562 | ttCATGATTAGTTTATGCCGCATCCTCTGTTATTGACGGGGCAAAACTTGCCGTCTGCGTCAGTAAAGGGGTAGCAATATGAGGGAGACATAAAATCAAAATGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGAg < 8:111403/139‑1 (MQ=255)ttCATGATTAGTTTATGCCGCATCCTCTGTTATTGACGGGGCAAAACTTGCCGTCTGCGTCAGTAAAGGGGTAGCAATATGAGGGAGACATAAAATCAAAATGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGAg < 4:427517/139‑1 (MQ=255)ttCATGATTAGTTTATGCCGCATCCTCTGTTATTGACGGGGCAAAACTTGCCGTCTGCGTCAGTAAAGGGGTAGCAATATGAGGGAGACATAAAATCAAAATGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGAg < 6:303426/139‑1 (MQ=255)ttCATGATTAGTTTATGCCGCATCCTCTGTTATTGACGGGGCAAAACTTGCCGTCTGCGTCAGTAAAGGGGTAGCAATATGAGGGAGACATAAAATCAAAATGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGAg < 3:109593/139‑1 (MQ=255) gTTTATGCCGCATCCTCTGTTATTGACGGGTCAAATGTTGCCGTCTGCGTCAGTAAAGGTGTAGCAATATGAGGGAGACATAAAATCAAAATGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGAGTGAATATAtt < 5:133855/139‑1 (MQ=255) gTTTATGCCGCATCCTCTGTTATTGACGGGGCAAAACTTGCCGTCTGCGTCAGTAAAGGGGTAGCAATATGAGGGAGACATAAAATCAAAATGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGAg < 1:56700/129‑1 (MQ=255) gTTTATGCCGCATCCTCTGTTATTGACGGGGCAAAACTTGCCGTCTGCGTCAGTAAAGGGGTAGCAATATGAGGGAGACATAAAATCAAAATGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGAg > 2:56700/1‑129 (MQ=255) gTTTATGCCGCATCCTCTGTTATTGACGGGGCAAAACTTGCCGTCTGCGTCAGTAAAGGGGTAGCAATATGAGGGAGACATAAAATCAAAATGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGAGGGAATATAtt > 7:165107/1‑139 (MQ=255) gTTTATGCCGCATCCTCTGTTATTGACGGGGCAAAACTTGCCGTCTGCGTCAGTAAAGGGGTAGCAATATGAGGGAGACATAAAATCAAAATGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGAGGGAATATAtt > 6:287181/1‑139 (MQ=255) tATGCCGCATCCTCTGTTATTGACGGGGCAAAACTTGCCGTCTGCGTCAGTAAAGGGGTAGCAATATGAGGGAGACATAAAATCAAAATGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGAGGGAATATATTcgg > 2:433982/1‑137 (MQ=255) tATGCCGCATCCTCTGTTATTGACGGGGCAAAACTTGCCGTCTGCGTCAGTAAAGGGGTAGCAATATGAGGGAGACATAAAATCAAAATGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGAGGGAATATATTCt < 3:237913/138‑1 (MQ=255) tATGCCGCATCCTCTGTTATTGACGGGGCAAAACTTGCCGTCTGCGTCAGTAAAGGGGTAGCAATATGAGGGAGACATAAAATCAAAATGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGAGGGAATATATTCt < 6:263034/138‑1 (MQ=255) tATGCCGCATACTGAGTTATTGACGGGGCAAAACTTGCCGTCTGCGTCAGTAAAGGGGTAGCAATATGAGGGAGACATAAAATCAAAATGCCTGATTGAAGATATCGCTTTTGGTAAACCTATGAGGGAATATATTCt < 3:443456/138‑1 (MQ=255) tGCCGCATCCTCTGTTATTGACGGGGCAAAACTTGCCGTCTGCGTCAGTAAAGGGGTAGCAATATGAGGGAGACATAAAATCAAAATGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGAGGGAATATATTCTggg > 6:354003/1‑139 (MQ=255) gCATCCTCTGTTATTGACGGGGCAAAACTTGCCGTCTGCGTCAGTAAAGGGGTAGCAATATGAGGGAGACATAAAATCAAAATGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGAGGGAATATATTCTGGGTACa < 6:140706/139‑1 (MQ=255) cATCCTCTGTTATTGACGGGGCAAAACTTGCCGTCTGCGTCAGTAAAGGGGTAGCAATATGAGGGAGACATAAAATCAAAATGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGAGGGAat < 7:362455/124‑1 (MQ=255) cATCCTCTGTTATTGACGGGGCAAAACTTGCCGTCTGCGTCAGTAAAGGGGTAGCAATATGAGGGAGACATAAAATCAAAATGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGAGGGAat > 8:362455/1‑124 (MQ=255) cATCCTCTGTTATTGACGGGGCAAAACTTGCCGTCTGCGTCAGTAAAGGGGTAGCAATATGAGGGAGACATAAAATCAAAATGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGAGGGAATATATTCTGGGTACAg > 7:166137/1‑139 (MQ=255) aTCCTCTGTTATTGACGGGGCAAAACTTGCCGTCTGCGTCAGTAAAGGGGTAGCAATATGAGGGAGACATAAAATCAAAATGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGAGGGAATATATTCTGGGTACAg > 3:119667/1‑138 (MQ=255) aTCCTCTGTTATTGACGGGGCAAAACTTGCCGTCTGCGTCAGTAAAGGGGTAGCAATATGAGGGAGACATAAAATCAAAATGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGAGGGAATATATTCTGGGTACAg > 5:160566/1‑138 (MQ=255) tGTTATTGACGGGGCAAAACTTGCCGTCTGCGTCAGTAAAGGGGTAGCAATATGAGGGAGACATAAAATCAAAATGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGATGGAATATATTCTGGGTACAGGAGACt > 7:31187/1‑138 (MQ=255) tGTTATTGACGGGGCAAAACTTGCCGTCTGCGTCAGTAAAGGGGTAGCAATATGAGGGAGACATAAAATCAAAATGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGATGGAATATATTCTGGGTACAGGAGACt > 7:24552/1‑138 (MQ=255) tGTTATTGACGGGGCAAAACTTGCCGTCTGCGTCAGTAAAGGGGTAGCAATATGAGGGAGACATAAAATCAAAATGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGAGGGAATATATTCTGGGTACAGGAGACt > 3:218024/1‑138 (MQ=255) aCGGGGCAAAACTTGCCGTCTGCGTCAGTAAAGGGGTAGCAATATGAGGGAGACATAAAATCAAAATGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGAGGGAATATAtt > 4:37023/1‑114 (MQ=255) aCGGGGCAAAACTTGCCGTCTGCGTCAGTAAAGGGGTAGCAATATGAGGGAGACATAAAATCAAAATGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGAGGGAATATAtt < 3:37023/114‑1 (MQ=255) aCGGGGCAAAACTTGCCGTCTGCGTCAGTAAAGGGGTAGCAATATGAGGGAGACATAAAATCAAAATGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGAGGGAATATATTCTGGGTACAGGAGACTGAAAAAAt > 5:362063/1‑138 (MQ=255) ggCAAAACTTGCCGTCTGCGTCAGTAAAGGGGTAGCAATATGAGGGAGACATAAAATCAAAATGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGATGGAATATATTCTGGGTACAGGAGACTGAAAAAATGAAAt < 8:24552/139‑1 (MQ=255) ggCAAAACTTGCCGTCTGCGTCAGTAAAGGGGTAGCAATATGAGGGAGACATAAAATCAAAATGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGATGGAATATATTCTGGGTACAGGAGACTGAAAAAATGAAAt < 8:31187/139‑1 (MQ=255) ggCAAAACTTGCCGTCTGCGTCAGTAAAGGGGTAGCAATATGAGGGAGACATAAAATCAAAATGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGAGGGAat < 3:238395/105‑1 (MQ=255) ggCAAAACTTGCCGTCTGCGTCAGTAAAGGGGTAGCAATATGAGGGAGACATAAAATCAAAATGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGAGGGAat > 4:238395/1‑105 (MQ=255) ggCAAAACTTGCCGTCTGCGTCAGTAAAGGGGTAGCAATATGAGGGAGACATAAAATCAAAATGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGAGGGAATATATTCTGGGTACAGGAGACTGAAAAAATGAAAt > 5:299716/1‑139 (MQ=255) ggCAAAACTTGCCGTCTGCGTCAGTAAAGGGGTAGCAATATGAGGGAGACATAAAATCAAAATGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGAGGGAATATATTCTGGGTACAGGAGACTGAAAAAATGAAAt > 8:137296/1‑139 (MQ=255) ggCAAAACTTGCCGTCTGCGTCAGTAAAGGGGTAGCAATATGAGGGAGACATAAAATCAAAATGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGAGGGAATATATTCTGGGTACAGGAGACTGAAAAAATGAAAt > 5:203105/1‑139 (MQ=255) ggCAAAACTTGCCGTCTGCGTCAGTAAAGGGGTAGCAATATGAGGGAGACATAAAATCAAAATGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGAGGGAATATATTCTGGGTACAGGAGACTGAAAAAATGAAAt > 1:391767/1‑139 (MQ=255) ggCAAAACTTGCCGTCTGCGTCAGTAAAGGGGTAGCAATATGAGGGAGACATAAAATCAAAATGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGAGGGAATATATTCTGGGTACAGGAGACTGAAAAAATGAAAt > 7:314250/1‑139 (MQ=255) ggCAAAACTTGCCGTCTGCGTCAGTAAAGGGGTAGCAATATGAGGGAGACATAAAATCAAAATGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGAGGGAATATATTCTGGGTACAGGAGACTGAAAAAATGAAAt > 5:392808/1‑139 (MQ=255) ggCAAAACTTGCCGTCTGCGTCAGTAAAGGGGTAGCAATATGAGGGAGACATAAAATCAAAATGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGAGGGAATATATTCTGGGTACAGGAGACTGAAAAAATGAAAt > 3:369293/1‑139 (MQ=255) ggCAAAACTTGCCGTCTGCGTCAGTAAAGGGGTAGCAATATGAGGGAGACATAAAATCAAAATGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGAGGGAATATATTCTGGGTACAGGAGACTGAAAAAATGAAAt > 3:356182/1‑139 (MQ=255) ggCAAAACTTGCCGTCTGCGTCAGTAAAGGGGTAGCAATATGAGGGAGACATAAAATCAAAATGCCTGAATGAAGATATCGC‑TTTGGTAAACCTATGAGGGAATATATTCTGGGTACAGGAGACTGAAAAAATGAAATc > 7:33798/1‑139 (MQ=255) cAAAACTTGCCGTCTGCGTCAGTAAAGGGGTAGCAATATGAGGGAGACATAAAATCAAAATGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGAGGGAATATATTCTGGGTACAGGAGACTGAAAAAATGAAATcc < 2:405467/139‑1 (MQ=255) cAAAACTTGCCGTCTGCGTCAGTAAAGGGGTAGCAATATGAGGGAGACATAAAATCAAAATGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGAGGGAATATATTCTGGGTACAGGAGACTGAAAAAATGAAATcc < 5:354003/139‑1 (MQ=255) cAAAACTTGCCGTCTGCGTCAGTAAAGGGGTAGCAATATGAGGGAGACATAAAATCAAAATGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGAGGGAATATATTCTGGGTACAGGAGACTGAAAAAATGAAATcc < 3:2740/139‑1 (MQ=255) cAAAACTTGCCGTCTGCGTCAGTAAAGGGGTAGCAATATGAGGGAGACATAAAATCAAAATGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGAGGGAATATATTCTGGGTACAGGAGACTGAAAAAATGAAATcc < 7:7634/139‑1 (MQ=255) cAAAACTTGCCGTCTGCGTCAGTAAAGGGGTAGCAATATGAGGGAGACATAAAATCAAAATGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGAGGGAATATATTCTGGGTACAGGAGACTGAAAAAATGAAATcc < 5:54834/139‑1 (MQ=255) aaaaCTTGCCTTCTGAGTGATTAAAGGGGTAGCAATATGAGGGAGACATAAAATCAAAATGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGATGGAATATATTCTGGGTACAGGAGACTGAAAAAATGAAATccc < 7:266267/139‑1 (MQ=255) aaaaCTTGCCGTCTGCGTCAGTAAAGGCGTAGCAATATGAGGGAGACATAAAATCAAAATGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGAGGGAATATATTCTGGGTACAGGAGACTGAAAAAATGAAATccc < 7:259845/139‑1 (MQ=255) aaCTTGCCGTCTGCGTCAGTAAAGGGGTAGCAATATGAGGGAGACATAAAATCAAAATGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGAGGGAATATATTCTGGGTACAGGAGACTGAAAAAATGAAATCCCTg < 5:287181/139‑1 (MQ=255) gCCGTCTGCGTCAGTAAAGGGGTAGCAATATGAGGGAGACATAAAATCAAAATGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGAGGGAATATATTCTGGGTACAGGAGACTGAAAAAATGAAATCCCTGCCGta > 1:239451/1‑139 (MQ=255) ccGTCTGCGTCAGTAAAGGGGTAGCAATATGAGGGAGACATAAAATCAAAATGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGAGGGAATATATTCTGGGTACAGGAGACTGAAAAAATGAAATCCCTGCCGta < 8:165107/138‑1 (MQ=255) ccGTCTGCGTCAGTAAAGGGGTAGCAATATGAGGGAGACATAAAATCAAAATGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGAGGGAATATATTCTGGGTACAGGAGACTGAAAAAATGAAATCCCTGCCGta < 8:438227/138‑1 (MQ=255) tGCGTCAGTAAAGGGGTAGCAATATGAGGGAGACATAAAATCAAAATGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGAGGGAATATATTCTGGGTACAGGAGACTGAAAAAATGAAATCCCTGCCGTATACCAt > 3:185792/1‑139 (MQ=255) gtaaGTAAAGGGGTAGCAATATGAGGGAGACATAAAATCAAAATGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGAGGTAATATATTCTGGGTACAGGAGACTGAAAAAATGAAATCCCTGCCGTATACCATCGc < 1:273205/136‑1 (MQ=255) gTAGCAATATGAGGGAGACATAAAATCAAAATGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGAGGGAATATATTCTGGGTACAGGAGACTGAAAAAATGAAATCCCTGCCGTATACCATCGCACTTCTTTTTTg < 8:166137/139‑1 (MQ=255) gTAGCAATATGAGGGAGACATAAAATCAAAATGCCTGAATGAAGATATCGCTTTTCGTAAACCTATGAGGGAATATATTCTGGGTACAGGAGACTGAAAAAATGAAATCCCTGCCGTATACCATCGCACTTCTTTTTTg < 2:391767/139‑1 (MQ=255) tAGCAATATGAGGGAGACATAAAATCAAAATGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGAGGGAATATATTCTGGGTACAGGAGACTGAAAAAATGAAATCCCTGCCGTATACCATCGCACTTCTTTTTTGc < 4:185792/139‑1 (MQ=255) aGCAATATGAGGGAGACATAAAATCAAAATGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGAGGGAATATATTCTGGGTACAGGAGACTGAAAAAATGAAATCCCTGCCGTATACCATCGCACTTCTTTTTTGCg > 4:230287/1‑139 (MQ=255) gCAATATGAGGGAGACATAAAATCAAAATGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGAGGGAATATATTCTGGGTACAGGAGACTGAAAAAATGAAATCCCTGCCGTATACCATCGCACTTCTTTTTTGCg > 3:341285/1‑138 (MQ=255) gCAATATGAGGGAGACATAAAATCAAAATGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGAGGGAATATATTCTGGGTACAGGAGACTGAAAAAATGAAATCCCTGCCGTATACCATCGCACTTCTTTTTTGCg > 3:290731/1‑138 (MQ=255) gCAATATGAGGGAGACATAAAATCAAAATGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGAGGGAATATATTCTGGGTACAGGAGACTGAAAAAATGAAATCCCTGCCGTATACCATCGCACTTCTTTTTTGCg > 4:70825/1‑138 (MQ=255) aaTATGAGGGAGACATAAAATCAAAATGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGAGGGAATATATTCTGGGTACAGGAGACTGAAAAAATGAAATCCCTGCCGTATACCATCGCACTTCTTTTTTGCGgat < 7:137296/139‑1 (MQ=255) tctGAGGGAGACATAAAATCAATATGCCTGAATGTAGATATCGCTTTTGGTAAACCTATGAGGGAATATATTCTGGGTACAGGAGACTGAAAAAATGAAATCCCTGCCGTATACCATCGCACTTCTTTTTTGCGgat < 2:25278/135‑1 (MQ=255) tatGAGGGAGACATAAAATCAAAATGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGAGGGAATATATTCTGGGTACAGGAGACTGAAAAAATGAAATcc < 1:345212/103‑1 (MQ=255) tatGAGGGAGACATAAAATCAAAATGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGAGGGAATATATTCTGGGTACAGGAGACTGAAAAAATGAAATcc > 2:345212/1‑103 (MQ=255) tatGAGGGAGACATAAAATCAAAATGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGAGGGAATATATTCTGGGTACAGGAGACTGAAAAAATGAAATCCCTGCCGTATACCATCGCACTTCTTTTTTGCGgatt > 4:68766/1‑138 (MQ=255) tGAGGGAGACATAAAATCAAAATGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGAGGGAATATATTCt < 8:60950/72‑1 (MQ=255) tGAGGGAGACATAAAATCAAAATGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGAGGGAATATATTCt > 7:60950/1‑72 (MQ=255) tGAGGGAGACATAAAATCAAAATGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGAGGGAATATATTCTGGGTACAGGAGACTGAAAAAATGAAATCCCTGCCGTATACCATCGCACTTCTTTTTTGCGgattgat > 7:21073/1‑139 (MQ=255) aGGGAGACATAAAATCAAAATGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGAGGGAATATATTCTGGGTACAGGAGACTGAAAAAATGAAATCCCTGCCGTATACCATCGCACTTCTTTTTTGCGGATTGATTa < 8:21073/139‑1 (MQ=255) gagaCATAAAATCAAAATGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGAGGGAATATATTCTGGGTACAGGAGACTGAAAAAATGAAATCCCTGCCGTATACCATCGCACTTCTTTTTTGCGGATTGATTATCg > 6:210784/1‑139 (MQ=255) agaCATAAATTCAAAATGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGAGGGAATATATTCTGGGTACAGGAGACTGAAAAAATGAAATCCCTGCCGTATACCATCGCACTTCTTTTTTGCGGATTGATTATCgt > 4:155594/1‑139 (MQ=255) aCATAAAATCAAAATGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGAGGGAATATATTCTGGGTACAGGAGACTGAAAAAATGAATTcc < 4:229809/93‑1 (MQ=255) aCATAAAATCAAAATGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGAGGGAATATATTCTGGGTACAGGAGACTGAAAAAATGAAATcc > 3:229809/1‑93 (MQ=255) aCATAAAATCAAAATGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGAGGGAATATATTCTGGGTACAGGAGACTGAAAAAATGAAATCCCTGCCGTATACCAt < 2:257387/107‑1 (MQ=255) aCATAAAATCAAAATGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGAGGGAATATATTCTGGGTACAGGAGACTGAAAAAATGAAATCCCTGCCGTATACCAt > 1:257387/1‑107 (MQ=255) aCATAAAATCAAAATGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGAGGGAATATATTCTGGGTACAGGAGACTGAAAAAATGAAATCCCTGCCGTATACCATCGCACTTCTTTTTTGCGGATTGATTATCgtgt > 2:242814/1‑139 (MQ=255) aCATAAAATCAAAATGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGAGGGAATATATTCTGGGTACAGGAGACTGAAAAAATGAAATCCCTGCCGTATACCATCGCACTTCTTTTTTGCGGATTGATTATCgtgt > 3:91580/1‑139 (MQ=255) aaTCAAAATGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGAGGGAATATATTCTGGGTACAGGAGACTGAAAAAATGAAATCCCTGCCGTATACCATCGCACTTCTTTTTTGCGGATTGATTATCGTGTCAATgg < 1:242814/139‑1 (MQ=255) aaaTGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGAGGGAATATATTCTGGGTACAGGAGACTGAAAAAATGAAATCCCTGCCGTATACCATCGCACTTCTTTTTTGCGGATTGATTATCGTGTCAATGGCTGCa < 5:231289/139‑1 (MQ=255) aaTGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGAGGGAATATATTCTGGGTACAGGAGACTGAAAAAATGAAATCCCTGCCGTATACCATCGCACTTCTTTTTTGCGGATTGATTATCGTGTCAATGGCTGCa > 5:148928/1‑138 (MQ=255) ccTGAATGAAGATATCGC‑TTTGGTAAACCTATGAGGGAATATATTCTGGGTACAGGAGACTGAAAAAATGAAATCCCTGCCGTATACCATCGCACTTCTTTTTTGCGGATTGATTATCGTGTCAATGGCTGCAAAAgg < 8:33798/138‑1 (MQ=255) aatgaaGATATCGCTTTTGGTAAACCTATGAGGGAATATATTCTGGGTACAGGAGACTGAAAAAATGAAATCCCTGCCGTATACCATCGCACTTCTTTTTTGCGGATTGATTATCGTGTCAATGGCTGCAAAAGGTCa < 6:447161/138‑1 (MQ=255) aaGATATCGCTTTTGGTAAACCTATGAGGGAATATATTCTGGGTACAGGAGACTGAAAAAATGAAATCCCTGCCGTATACCATCGCACTTCTTTTTTGCGGATTGATTATCGTGTCAATGGCTGCAAAAGGTCATTCaa < 3:68766/139‑1 (MQ=255) atCGCTTTTGGTAAACCTATGAGGGAATATATTCTGGGTACAGGAGACTGAAAAAATGAAATCCCTGCCGTATACCACCGCACTTCTTTTTTGCGGATTGATTATCGTGTCAATGGCTGCAAAAGGTCATTCAACGGa > 3:214631/1‑138 (MQ=255) tCGCTTTTGGTAAACCTATGAGGGAATATATTCTGGGTACAGGAGACTGAAAAAATGAAATCCCTGCCGTATACCATCGCACTTCTTTTTTGCGGATTGATTATCGTGTCAATGGCTGCAAAAGGTCATTCAACGGaca < 6:201794/139‑1 (MQ=255) tCGCTTTTGGTAAACCTATGAGGGAATATATTCTGGGTACAGGAGACTGAAAAAATGAAATCCCTGCCGTATACCATCGCACTTCTTTTTTGCGGATTGATTATCGTGTCAATGGCTGCAAAAGGTCATTCAACGGaca < 5:251881/139‑1 (MQ=255) tCGCTTTTGGTAAACCTATGAGGGAATATATTCTGGGTACAGGAGACTGAAAAAATGAAATCCCTGCCGTATACCATCGCACTTCTTTTTTGCGGATTGATTATCGTGTCAATGGCTGCAAAAGGTCATTCAACGGaca > 5:201794/1‑139 (MQ=255) tCGCTTTTGGTAAACCTATGAGGGAATATATTCTGGGTACAGGAGACTGAAAAAATGAAATCCCTGCCGTATACCATCGCACTTCTTTTTTGCGGATTGATTATCGTGTCAATGGCTGCAAAAGGTCATTCAACGGac < 3:230287/138‑1 (MQ=255) gaaaaCCTATGAGGGAAAATATTCTGCGTACAGGAGACACAAAAAATGAAATCCCTGCCGTATACCATCGCACTTCTTTTTTGCGGATTGATTAACGTGTCAATGGCTGAAAAAGGTCATTCAACGGACACAGACGAGt < 2:438549/137‑1 (MQ=255) gTAAACCTATGAGGGAATATATTCTGGGTACAGGAGACTGAAAAAATGAAATCCCTGCCGTATACCATCGCACTTCTTTTTTGCGGATTGATTATCGTGTCAATGGCTGCAAAAGGTCATTCAACGGACACAGACGAGt < 6:299716/139‑1 (MQ=255) gTAAACCTATGAGGGAATATATTCTGGGTACAGGAGACTGAAAAAATGAAATCCCTGCCGTATACCATCGCACTTCTTTTTTGCGGATTGATTATCGTGTCAATGGCTGCAAAAGGTCATTCAACGGACACAGACGAGt < 6:362063/139‑1 (MQ=255) tGAGGGAATATATTCTGGGTACAGGAGACTGAAAAAATGAAATCCCTGCCGTTTACCATCGCACTTCTTTTTTGCGGATTGATTATCGTGTCAATGGCTGCAAAAGGTCATTCAACGGACACAGACGAGTCCGTTCaa > 7:240768/1‑138 (MQ=255) tGAGGGAATATATTCTGGGTACAGGAGACTGAAAAAATGAAATCCCTGCCGTATACCATCGCACTTCTTTTTTGCGGATTGATTATCGTGTCATTGGCTGCAAAAGGTCATTCAACGGACACAGACGAGTCCGTTCaa > 1:443538/1‑138 (MQ=255) tGAGGGAATATATTCTGGGTACAGGAGACTGAAAAAATGAAATCCCTGCCGTATACCATCGCACTTCTTTTTTGCGGATTGATTATCGTGTCAATGGCTGCAAAAGGTCATTCAACGGACACAGACGAGTCCGTTCaa > 7:385642/1‑138 (MQ=255) tGAGGGAATATATTCTGGGTACAGGAGACTGAAAAAATGAAATCCCTGCCGTATACCATCGCACTTCTTTTTTGCGGATTGATTATCGTGTCAATGGCTGCAAAAGGTCATTCAACGGACACAGACGAGTCCGTTCaa > 1:438102/1‑138 (MQ=255) tGAGGGAATATATTCTGGGTACAGGAGACTGAAAAAATGAAATCCCTGCCGTATACCATCGCACTTCTTTTTTGCGGATTGATTATCGTGTCAATGGCTGCAAAAGGTCATTCAACGGACACAGACGAGTCCGTTCa < 4:431934/137‑1 (MQ=255) | TTCATGATTAGTTTATGCCGCATCCTCTGTTATTGACGGGGCAAAACTTGCCGTCTGCGTCAGTAAAGGGGTAGCAATATGAGGGAGACATAAAATCAAAATGCCTGAATGAAGATATCGCTTTTGGTAAACCTATGAGGGAATATATTCTGGGTACAGGAGACTGAAAAAATGAAATCCCTGCCGTATACCATCGCACTTCTTTTTTGCGGATTGATTATCGTGTCAATGGCTGCAAAAGGTCATTCAACGGACACAGACGAGTCCGTTCAA > CP006881/974290‑974562 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |