| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP006881 | 1,653,491 | C→T | 69.7% | T112I (ACA→ATA) | U712_08495 → | GTP‑sensing transcriptional pleiotropic repressor CodY |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 1,653,491 | 0 | C | T | 69.7% | 101.3 / 62.7 | 76 | T112I (ACA→ATA) | U712_08495 | GTP‑sensing transcriptional pleiotropic repressor CodY |
| Reads supporting (aligned to +/- strand): ref base C (12/11); new base T (36/17); total (48/28) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.07e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.90e-01 | |||||||||||
GTCAATTCCCTGAAGAATATACGAAAAATCTGTTTAATGTCCCTGAAACATCTTCTAACTTGGATATTAATAGTGAATATACTGCTTTCCCTGTTGAGAACAGAGACCTGTTTCAAGCTGGTTTAACAACAATTGTGCCGATCATCGGAGGCGGGGAAAGATTAGGAACACTTATTCTTTCGCGTTTACAAGATCAATTCAATGACGATGACTTAATTCTAGCTGAATACGGCGCAACAGTTGTCGGAATGGAAATCC > CP006881/1653362‑1653619 | gTCAATTCCCTGAAGAATATACGAAAAATCTGTTTAATGTCCCTGAAACATCTTCTAACTTGGATATTAATAGTGAATATACTGCTTTCCCTGTTGAGAACAGAGACCTGTTTCAAGCTGGTTTAACAATAATTGTGc < 4:314117/138‑1 (MQ=255) tCAATTCTCTGAAGAATATACGAAAAATCTGTTTAATGTCCCTGAAACATCTTCTAACTTGGATATTAATAGTGAATATACTGCTTTCCCTGTTGAGAACAGAGACCTGTTTCAAGCTGGTTTAACAACAATTGTGcc > 4:323493/1‑138 (MQ=255) taCGAAAAATCTGTTTAATGTCCCTGAAACATCTTCTAACTTGGATATTAATAGTGAATATACTGCTTTCCCTGTTGAGAACAGAGACCTGTTTCAAGCTGGTTTAACAACAATTGTGCCGATCATCGGAGGCGGGGa < 6:59376/138‑1 (MQ=255) cGAAAAATCTGTTTAATGTCCCTGAAACATCTTCTAACTTGGATATTAATAGTGAATATACTGCTTTCCCTGTTGAGAACAGAGACCTGTTTCAAGCTGGTTTAACAACAATTGTGCCGATCATCGGAGGCGGGGAAAg < 5:409082/139‑1 (MQ=255) aaaTCTGTTTAATGTCCCTGAAACATCTTCTAACTTGGATATTAATAGTGAATATACTGCTTTCCCTGTTGAGAACAGAGACCTGTTTCAAGCTGGTTTAACAACAATTGTGCCGATCATCGGAGGCGGGGa > 7:36647/1‑132 (MQ=255) aaaTCTGTTTAATGTCCCTGAAACATCTTCTAACTTGGATATTAATAGTGAATATACTGCTTTCCCTGTTGAGAACAGAGACCTGTTTCAAGCTGGTTTAACAACAATTGTGCCGATCATCGGAGGCGGGGa < 8:36647/132‑1 (MQ=255) tttAATGTCCCTGAAACATCTTCTAACTTGGATATTAATAGTGAATATACTGCTTTCCCTGTTGAGAACAGAGACCTGTTTCAAGCTGGTTTAACAATAATTGTGCCGATCATCGGAGGCGGGGAAAGATTAGGAacac > 3:280414/1‑139 (MQ=255) tGTCCCTGAAACATCTTCTAACTTGGATATTAATAGTGAATATACTGCTTTCCCTGTTGAGAACAGAGACCTGTTTCAAGCTGGTTTAACAATAATTGTGCCGATCATCGGAGGCGGGGAAAGATTAGGAACACTTAtt > 6:356292/1‑139 (MQ=255) tGTCCCTGAAACATCTTCTAACTTGGATATTAATAGTGAATATACTGCTTTCCCTGTTGAGAACAGAGACCTGTTTCAAGCTGGTTTAACAATAATTGTGCCGATCATCGCAGGCGGGGAAAGATAAGGAACACTTAt > 7:117484/1‑138 (MQ=255) aaaCATCTTCTAACTTGGATATTAATAGTGAATATACTGCTTTCCCTGTTGAGAACAGAGACCTGTTTCAAGCTGGTTTAACAACAATTGTGCCGATCATCGGAGGCGGGGAAAGATTAGGAACACTTATTCTTTcgcg < 3:60182/139‑1 (MQ=255) cttctAACTTGGATATTAATAGTGAATATACTGCTTTCCCTGTTGAGAACAGAGACCTGTTTCATGCTGGTTTAACAATAATTGTGCCGATCATCGGAGGCGGGGAATGATTAGGAACACTTATACTTACGCGTTTAc > 1:184879/1‑138 (MQ=255) cttctAACTTGGATATTAATAGTGAATATACTGCTTTCCCTGTTGAGAACAGAGACCTGTTTCAAGCTGGTTTAACAATAATTGTGCCGATCATCGGAGGCGGGGAAAGATTAGGAACACTTATTCTTTCGCGTTTAc > 3:355346/1‑138 (MQ=255) cttctAACTTGGATATTAATAGTGAATATACTGCTTTCCCTGTTGAGAACAGAGACCTGTTTCAAGCTGGTTTAACAATAATTGTGCCGATCATCGGAGGCGGGGAAAGATTAGGAACACTTATTCTTTCGCGTTTAc > 5:266455/1‑138 (MQ=255) ctAACTTGGATATTAATAGTGAATATACTGCTTTCCCTGTTGAGAACAGAGACCTGTTTCAAGCTGGTTTAACAATAATTGTGCCGATCATCGGAGGCGGGGAAAGATTAGGAACACTTATTCTTTCGCGTTTAc < 3:49189/135‑1 (MQ=255) aTAGTGAATATACTGCTTTCCCTGTTGAGAACAGAGACCTGTTTCAAGCTGGTTTAACAATAATTGTGCCGATCATCGGAGGCGGGGAAAGATTAGGAACACTTATTCTTTCGCGTTTACAAGATCAATTCAATGACGa < 3:178733/139‑1 (MQ=255) aTAGTGAATATACTGCTTTCCCTGTTGAGAACAGAGACCTGTTTCAAGCTGGTTTAACAATAATTGTGCCGATCATCGGAGGCGGGGAAAGATTAGGAACACTTATTCTTTCGCGTTTACAAGATCAATTCAATGACGa < 7:144520/139‑1 (MQ=255) aTAGTGAATATACTGCTTTCCCTGTTGAGAACAGAGACCTGTTTCAAGCTGGTTTAACAATAATTGTGCCGATCATCGGAGGCGGGGAAAGATTAGGAACACTTATTCTTTCGCGTTTACAAGATCAATTCAATGACGa < 1:288729/139‑1 (MQ=255) tGAATATACTGCTTTCCCTGTTGAGAACAGAGACCTGTTTCAAGCTGGTTTAACAATAATTGTGCCGATCATCGGAGGCGGGGAAAGATTAGGAACACTTATTCTTTCGCGTTTACAAGATCAATTCAATGACGATGAc > 8:329009/1‑139 (MQ=255) tGAATATACTGCTTTCCCTGTTGAGAACAGAGACCTGTTTCAAGCTGGTTTAACAATAATTGTGCCGATCATCGGAGGCGGGGAAAGATTAGGAACACTTATTCTTTCGCGTTTACAAGATCAATTCAATGACGATGAc > 4:214005/1‑139 (MQ=255) tGAATATACTGCTTTCCCTGTTGAGAACAGAGACCTGTTTCAAGCTGGTTTAACAATAATTGTGCCGATCATCGGAGGCGGGGAAAGATTAGGAACACTTATTCTTTCGCGTTTACAAGATCAATTCAATGACGATGAc > 1:98541/1‑139 (MQ=255) aaTATACTGCTTTCCCTGTTGAGAACAGAGACCTGTTTCAAGCTGGTTTAACAATAATTGTGCCGATCATCGGAGGCGGGGAAAGATTAGGAACACTTATTCTTTCGCGTTTACAAGATCAATTCAATGACGATGACt < 6:266455/138‑1 (MQ=255) aaTATACTGCTTTCCCTGTTGAGAACAGAGACCTGTTTCAAGCTGGTTTAACAATAATTGTGCCGATCATCGGAGGCGGGGAAAGATTAGGAACACTTATTCTTTCGCGTTTACAAGATCAATTCAATGACGATGACt > 6:369115/1‑138 (MQ=255) taCTGCTTTCCCTGTTGAGAACAGAGACCTGTTTCAAGCTGGTTTAACAACAATTGTGCCGATCATCGGAGGCGGGGAAAGATTAGGAACACTTATTCTTTCGCGTTTACAAGATCAATTCAATGACGATGACTTAAt < 3:323493/138‑1 (MQ=255) aCTGCTTTCCCTGTTGAGAACAGAGACCTGTTTCAAGCTGGTTTAACAATAATTGTGCCGATCATCGGAGGCGGGGAAAGATTAGGAACACTTATTCTTTCGCGTTTACAAGATCAATTCAATGACGATGACTTAATTc > 6:428401/1‑139 (MQ=255) aCTGCTTTCCCTGTTGAGAACAGAGACCTGTTTCAAGCTGGTTTAACAATAATTGTGCCGATCATCGGAGGCGGGGAAAGATTAGGAACACTTATTCTTTCGCGTTTACAAGATCAATTCAATGACGATGACTTAATTc > 5:262141/1‑139 (MQ=255) aCTGCTTTCCCTGTTGAGAACAGAGACCTGTTTCAAGCTGGTTTAACAACAATTGTGCCGATCATCGGAGGCGGGGAAAGATTAGGAACACTTATTCTTTCGCGTTTACAAGATCAATTCAATGACGATGACTTAATTc < 3:62112/139‑1 (MQ=255) cTGCTTTCCCTGTTGAGAACAGAGACCTGTTTCAAGCTGGTTTAACAACAATTGTGCCGATCATCGGAGGCGGGGAAAGATTAGGAACACTTATTCTTTCGCGTTTACAAGATCAATTCAATGACGATGACTTAATTc < 8:64618/138‑1 (MQ=255) gCTTTCCCTGTTGAGAACAGAGACCTGTTTCAAGCTGGTTTAACAATAATTGTGCCGATCATCGGAGGCGGGGAAAGATTAGGAACACTTATTCTTTCGCGTTTACAAGATCAATTCAATGACGATGACTTAATTCTAg > 4:293300/1‑139 (MQ=255) gCTTTCCCTGTTGAGAACAGAGACCTGTTTCAAGCTGGTTTAACAATAATTGTGCCGATCATCGGAGGCGGGGAAAGATTAGGAACACTTATTCTTTCGCGTTTACAAGATCAATTCAATGACGATGACTTAATTCTAg > 8:70267/1‑139 (MQ=255) gCTTTCCCTGTTGAGAACAGAGACCTGTTTCAAGCTGGTTTAACAATAATTGTGCCGATCATCGGAGGCGGGGAAAGATTAGGAACACTTATTCTTTCGCGTTTACAAGATCAATTCAATGACGATGACTTAATTCTAg > 2:320348/1‑139 (MQ=255) gCTTTCCCTGTTGAGAACAGAGACCTGTTTCAAGCTGGTTTAACAATAATTGTGCCGATCATCGGAGGCGGGGAAAGATTAGGAACACTTATTCTTTCGCGTTTACAAGATCAATTCAATGACGATGACTTAATTCTAg > 8:428839/1‑139 (MQ=255) gCTTTCCCTGTTGAGAACAGAGACCTGTTTCAAGCTGGTTTAACAATAATTGTGCCGATCATCGGAGGCGGGGAAAGATTAGGAACACTTATTCTTTCGCGTTTACAAGATCAATTCAATGACGATGACTTAATTCTAg > 3:305608/1‑139 (MQ=255) gCTTTCCCTGTTGAGAACAGAGACCTGTTTCAAGCTGGTTTAACAATAATTGTGCCGATCATCGGAGGCGGGGAAAGATTAGGAACACTTATTCTTTCGCGTTTACAAGATCAATTCAATGACGATGACTTAATTCTAg > 3:267537/1‑139 (MQ=255) cTTTCCCTGTTGAGAACAGAGACCTGTTTCAAGCTGGTTTAACAATAATTGTGCCGATCATCGGAGGCGGGGAAAGATTAGGAACACTTATTCTTTCGCGTTTACAAGATCAATTCAATGACGATGACTTAATTCTAg < 5:356292/138‑1 (MQ=255) cTTTCCCTGTTGAGAACAGAGACCTGTTTCAAGCTGGTTTAACAATAATTGTGCCGATCATCGGAGGCGGGGAAAGATTAGGAACACTTATTCTTTCGCGTTTACAAGATCAATTCAATGACGATGACTTAATTCTAg < 4:305608/138‑1 (MQ=255) tttCCCTGTTGAGAACAGAGACCTGTTTCAAGCTGGTTTAACAATAATTGTGCCGATCATCGGAGGCGGGGAAAGATTAGGAACACTTATTCTTTCGCGTTTACAAGATCAATTCAATGAc > 5:331786/1‑121 (MQ=255) tttCCCTGTTGAGAACAGAGACCTGTTTCAAGCTGGTTTAACAATAATTGTGCCGATCATCGGAGGCGGGGAAAGATTAGGAACACTTATTCTTTCGCGTTTACAAGATCAATTCAATGAc < 6:331786/121‑1 (MQ=255) tCCCTGTTGAGAACAGAGACCTGTTTCAAGCTGGTTTAACAATAATtgtg > 4:325902/1‑50 (MQ=255) tCCCTGTTGAGAACAGAGACCTGTTTCAAGCTGGTTTAACAATAATtgtg < 3:325902/50‑1 (MQ=255) tCCCTGTTGAGAACAGAGACCTGTTTCAAGCTGGTTTAACAATAATTGTGCCGATCATCGGAGGCGGGGAAAGATTAGGAACACTTATTCTTTCGCGTTTACAAGATCAATTCAATGACGATGACTTAATTCTAGCTg > 3:32137/1‑138 (MQ=255) tCCCTGTTGAGAACAGAGACCTGTTTCAAGCTGGTTTAACAATAATTGTGCCGATCATCGGAGGCGGGGAAAGATTAGGAACACTTATTCTTTCGCGTTTACAAGATCAATTCAATGACGATGACTTAATTCTAGCTg > 1:368543/1‑138 (MQ=255) ccTGTTGAGAACAGAGACCTGTTTCAAGCTGGTTTAACAACAATTGTGCCGATCATCGGAGGCGGGGAAAGATTAGGAACACTTATTCTTTCGCGTTTACAAGATCAATTCAATGACGATGACTTAATTCTAGCTGaa > 6:19453/1‑138 (MQ=255) cTGTTGAGAACAGAGACCTGTTTCAAGCTGGTTTAACAATAATTGTGCCGATCATCGGAGGCGGGGAAAGATTAGGAACACTTATTCTTTCGCGTTTACAAGATCAATTCAATGACGATGACTTAATTCTAGCTGAATa < 8:125431/139‑1 (MQ=255) cTGTTGAGAACAGAGACCTGTTTCAAGCTGGTTTAACAATAATTGTGCCGATCATCGGAGGCGGGGAAAGATTAGGAACACTTATTCTTTCGCGTTTACAAGATCAATTCAATGACGATGACTTAATTCTAGCTGAATa < 3:293300/139‑1 (MQ=255) tggagaACAGAGACCTGTTTCAAGCTGGTTTAACATTAATTGTGCCGATCATCGGAGGCGGGGAAAGATTAGGAACACTTATTCTTTCGCGTTTACAAGATCAATTCAATGACTATTACTTACTTCTAGCTTATTACgg < 6:176944/137‑1 (MQ=255) tGAGAACAGAGACCTGTTTCAAGCTGGTTTAACAACAATTGTGTCGATCATCGGAGGCGGGGAAAGATTAGGAACACTTATTCTTTCGCGTTTACAAGATCAATTCAATGACGATGACTTAATTCTAGCTGAATACGgc > 3:122758/1‑139 (MQ=255) tGAGAACAGAGACCTGTTTCAAGCTGGTTTAACAACAATTGTGCCGATCATCGGAGGCGGGGAAAGATTAGGAACACTTATTCTTTCGCGTTTACATGAt < 4:96535/100‑1 (MQ=255) tGAGAACAGAGACCTGTTTCAAGCTGGTTTAACAACAATTGTGCCGATCATCGGAGGCGGGGAAAGATTAGGAACACTTATTCTTTCGCGTTTACATGAt > 3:96535/1‑100 (MQ=255) gaACAGAGACCTGTTTCAAGCTGGTTTAACAATAATTGTGCCGATCATCGGAGGCGGGGAAAGATTAGGAACACTTATTCTTTCGCGTTTACAAGATCAATTCAATGACGATGACTTAATTCTAGCTGAATACGGCGCa < 3:214005/139‑1 (MQ=255) aaCAGAGACCTGTTTCAAGCTGGTTTAACAACAATTGTGCCGATCATCGGAGGCGGGGAAAGATTAGGAACACTTATTCTTTCGCGTTTACAAGATCTATTCAATGACGa < 3:407907/110‑1 (MQ=255) aaCAGAGACCTGTTTCAAGCTGGTTTAACAACAATTGTGCCGATCATCGGAGGCGGGGAAAGATTAGGAACACTTATTCTTTCGCGTTTACAAGATCAATTCAATGACGa > 4:407907/1‑110 (MQ=255) aaCAGAGACCTGTTTCAAGCTGGTTTAACAACAATTGTGCCGATCATCGGAGGCGGGGAAAGATTAGGAACACTTATTCTTTCGCGTTTACAAGATCAATTCAATGACGATGACTTAATTCTAGCTGAATACGGCGCaa > 3:11025/1‑139 (MQ=255) gagaCCTGTTTCAAGCTGGTTTAACAATAATTGTGCCGATCATCGGAGGCGGGGAAAGATTAGGAACACTTATTCTTTCGCGTTTACAAGATCAATTCAATGACGATGACTTAATTCTAGCTGAATACGGCGCAACAGt > 1:75486/1‑139 (MQ=255) agaCCTGTTTCAAGCTGGTTTAACAATAATTGTGCCGATCATCGGAGGCGGGGAAAGATTAGGAACACTTATTCTTTCGCGTTTACAAGATCAATTCAATGACGATGACTTAATTCTAGCTGAATACGGCGCACCAGtt > 4:397363/1‑139 (MQ=255) agaCCTGTTTCAAGCTGGTTTAACAATAATTGTGCCGATCATCGGAGGCGGGGAAAGATTAGGAACACTTATTCTTTCGCGTTTACAAGATCAATTCAATGACGATGACTTAATTCTAGCTGAATACGGCGCAACAGtt > 4:390832/1‑139 (MQ=255) agaCCTGTTTCAAGCTGGTTTAACAATAATTGTGCCGATCATCGGAGGCGGGGAAAGATTAGGAACACTTATTCTTTCGCGTTTACAAGATCAATTCAATGACGATGACTTAATTCTAGCTGAATACGGCGCAACAGtt > 5:78505/1‑139 (MQ=255) agaCCTGTTTCAAGCTGGTTTAACAATAATTGTGCCGATCATCGGAGGCGGGGAAAGATTAGGAACACTTATTCTTTCGCGTTTACAAGATCAATTCAATGACGATGACTTAATTCTAGCTGAATACGGCGCAACAGtt > 4:54952/1‑139 (MQ=255) agaCCTGTTTCAAGCTGGTTTAACAACAATTGTGCCGATCATCGGAGGCGGGGAAAGATTAGGAAGACTTATTCTTTCGCGTTTACAAGATCAATTCAATGACGATGACTTAATTCTAGCTGAATACGGCGCAACAGtt > 5:87089/1‑139 (MQ=255) agaCCTGTTTCAAGCTGGTTTAACAACAATTGTGCCGATCATCGGAGGCGGGGAAAGATTAGGAACACTTATTCTTTCGCGTTTACAAGATCAATTCAATGACGATGACTTAATTCTAGCTGAATACGGCGCaa < 3:272187/134‑1 (MQ=255) agaCCTGTTTCAAGCTGGTTTAACAACAATTGTGCCGATCATCGGAGGCGGGGAAAGATTAGGAACACTTATTCTTTCGCGTTTACAAGATCAATTCAATGACGATGACTTAATTCTAGCTGAATACGGCGCaa > 4:272187/1‑134 (MQ=255) tGTTTCAAGCTGGTTTAACAATAATTGTGCCGATCATCGGAGGCGGGGAAAGATTAGGAACACTTATTCTTTCGCGTTTACAAGATCAATTCAATGACGATGACTTAATTCTAGCTGAATACGgcgc < 1:363295/127‑1 (MQ=255) tGTTTCAAGCTGGTTTAACAATAATTGTGCCGATCATCGGAGGCGGGGAAAGATTAGGAACACTTATTCTTTCGCGTTTACAAGATCAATTCAATGACGATGACTTAATTCTAGCTGAATACGgcgc > 2:363295/1‑127 (MQ=255) tGTTTCAAGCTGGTTTAACAATAATTGTGCCGATCATCGGAGGCGGGGAAAGATTAGGAACACTTATTCTTTCGCGTTTACAAGATCAATTCAATGACGATGACTTAATTCTAGCTGAATACGGCGCAACAGTTGTCg > 7:310559/1‑138 (MQ=255) tGTTTCAAGCTGGTTTAACAATAATTGTGCCGATCATCGGAGGCGGGGAAAGATTAGGAACACTTATTCTTTCGCGTTTACAAGATCAATTCAATGACGATGACTTAATTCTAGCTGAATACGGCGCAACAGTTGTCg > 1:257313/1‑138 (MQ=255) tGTTTCAAGCTGGTTTAACAACAATTGTGCCGATCATCGGAGGCGGGGAAAGATTAGGAACACTTATTCTTACGCGTTTACAAGATCAATTCAATGACGATGACTTAATTCTAGCTGAATACGGCGCAACAGTTGTCg > 3:93360/1‑138 (MQ=255) tttCAAGCTGGTTTAACAATAATTGTGCCGATCATCGGAGGCGGGGAAAGATTAGGAACACTTATTCTTTCGCGTTTACAAGATCAATTCAATGACGATGACTTAATTCTAGCTGAATACGGCGCAACAGTTGTCGGaa > 3:316634/1‑139 (MQ=255) aGCTGGTTTAACAATAATTGTGCCGATCATCGGAGGCgggg > 6:396446/1‑41 (MQ=255) aGCTGGTTTAACAATAATTGTGCCGATCATCGGAGGCgggg < 5:396446/41‑1 (MQ=255) aGCTGGTTTAACAATAATTGTGCCGATCATCGGAGGCGGGGAAAGATTAGGAACACTTATTCTTTCGCGTTTACAAGATCAATTCAATGACGa > 2:306819/1‑93 (MQ=255) aGCTGGTTTAACAATAATTGTGCCGATCATCGGAGGCGGGGAAAGATTAGGAACACTTATTCTTTCGCGTTTACAAGATCAATTCAATGACGa < 1:306819/93‑1 (MQ=255) aGCTGGTTTAACAACAATTGTGCCGATCATCGGAGGCGGGGAAAGATTAGGAACACTTATTCTTTCGCGTTTACAAGATCAATTCAATGACGATGACTTAATTCTAGCTGAATACGGCGCAACAGTTGTCGGAATGGa > 6:308146/1‑138 (MQ=255) gTTTAACAATAATTGTGCCGATCATCGGAGGCGGGGAAAGATTAGGAACACTTATTCTTTCGCGTTTACAAGATCAATTCAATGACGATGACTTAATTCTAGCTGAATACGGCGCAACAGTTGTCGGAATGGAAATcc > 5:252367/1‑138 (MQ=255) gTTTAACAATAATTGTGCCGATCATCGGAGGCGGGGAAAGATTAGGAACACTTATTCTTTCGCGTTTACAAGATCAATTCAATGACGATGACTTAATTCTAGCTGAATACGGCGCAACAGTTGTCGGAATGGAAATcc > 8:178226/1‑138 (MQ=255) gTTTAACAATAATTGTGCCGATCATCGGAGGCGGGGAAAGATTAGGAACACTTATTCTTTCGCGTTTACAAGATCAATTCAATGACGATGACTTAATTCTAGCTGAATACGGCGCAACAGTTGTCGGAATGGAAATcc > 5:412012/1‑138 (MQ=255) gTTTAACAACAATTGTGCCGATCATCGGAGGCGGGGAAAGATTAgg < 7:422852/46‑1 (MQ=255) gTTTAACAACAATTGTGCCGATCATCGGAGGCGGGGAAAGATTAgg > 8:422852/1‑46 (MQ=255) | GTCAATTCCCTGAAGAATATACGAAAAATCTGTTTAATGTCCCTGAAACATCTTCTAACTTGGATATTAATAGTGAATATACTGCTTTCCCTGTTGAGAACAGAGACCTGTTTCAAGCTGGTTTAACAACAATTGTGCCGATCATCGGAGGCGGGGAAAGATTAGGAACACTTATTCTTTCGCGTTTACAAGATCAATTCAATGACGATGACTTAATTCTAGCTGAATACGGCGCAACAGTTGTCGGAATGGAAATCC > CP006881/1653362‑1653619 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |