| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP006881 | 2,780,237 | G→T | 13.2% | H17N (CAT→AAT) | U712_14330 ← | Uncharacterized protein ytxC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 2,780,237 | 0 | G | T | 13.2% | 171.2 / 3.4 | 81 | H17N (CAT→AAT) | U712_14330 | Uncharacterized protein ytxC |
| Reads supporting (aligned to +/- strand): ref base G (35/31); new base T (2/11); total (37/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.55e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AATTTGACCAGAATCGGCTCCATAAAACGCTGAATAGGAAAAGCCGGATTCGCTTTTTCAATCCCGATTTTTCGTATGCCTTCACGGACAATGATATTGTTCCGATCGTCCGAATGCTGAATGAGATGTAAAAAAGCGGCTGCATCATGGTCATCTTCAAAGATTATTTCAAGCATGTTTGTCCCCCCTTACGGCATCTGTTACAAGTATATGGGGGATGTTTTTAAAATAGACGTAAAGGTCATTGGCAAATCTTAATTTGATT > CP006881/2780110‑2780374 | attttCACCAGACTCGGACCCATAAACCCCTCAAATGCAAACGCCGGATTCGCTTTTTAAATCCCGATTTTTCGTATCCCTTCACGGACAATGATATTGTTCCGATCGCCCTAAGGCTCAATGATATGTAAAAACGCgg < 8:186516/137‑1 (MQ=255)aaTTTGACAATAATCGGCTCCATAAAACGCTGAATAGTAAAAGCCGGATTCGATTTTTAAATCCTGATTTTTCGTATGCATTCACGGACAATGATTTTGTTCCTATCGTCCGAATGCTTAATGAGATTTAAAAAAGCgg < 8:47518/139‑1 (MQ=255) ttttGACCAGACTCGGCTCAAAAAAAGGATGAATACTAACAGCCGTATTCGCTTTTTCAATCCCGATTTTTCTTATGCCTCCACGGACAATTTTTTTTTTCCGATCGCCCGATTGCTGATTGTTATGAAAAAAAGCGGc < 4:345971/138‑1 (MQ=255) ttGACCAGAATCGGCTCCATAAAACGCTGAATAGGAAAAGCCGGATTCGCTTTTTAAATCCCGATTTTTAGTATTCCTTCACGGACAATGATATTTTTACGATAGTCCGAATGGTGAATGAGATTTAAAAAAGAGGATg > 2:421965/1‑139 (MQ=255) aTCGGCTCAATAAACCGCTTATTAGTAAAAGCGGGATTCGTTTTTTAAATCCCTATTTTTCGTATGCCTTCACGTACATTGATATTGTTCCTTTCGTCCGAATGCTTAATTATATGTAAAAAAGCGGCTGCATCATGGt < 8:286409/139‑1 (MQ=255) aTCGGCTAAATAAAAGGCTTAATTGTAAAAGCCGGTTTGGTTTTTTAAATCCCTTTTTTTGGTATGCCTTAACGTAAATTTTTTTTGTTCCGTTCGTCCTATTGCTTAATTTTTTTTAAAAAAGCGGCTGCATCATGGt < 2:9963/139‑1 (MQ=255) ggCTCCATAAAACGCTGAATAGGAAAAGCCGGATTCGCTTTTTCAATCCCGATTTTTCGTATGCCTTCACGGACAATGATATTGTTCCGATCGTCCGAATGCTGAATGAGATGTAAAAAAGCGGCTGCATCATGGTCa < 5:194321/138‑1 (MQ=255) attAAAACGCTTAATAGGAAAAGCCGGATTCGCTTTTTCATTCCCTATTTTTCTTATGCATTCACGGAAATTTATATTGTTCGGTGGTTCCGATTGCTGAATGTGATTTAAAAAAGCGGCTGCATCATGGTCATCTTCa < 6:408631/137‑1 (MQ=255) aaTAAAACTCTTAATAGTAAAGGCCGTTTTGTATTTTTAAATCCTTTTTTTTCTTTTGACTTAACGTAAAATTATTTTGTTCCGTTCTGCGTATTGTTTAATGATATTAAAAAAAGCGGCTGCATCATGGTCATCTTCa < 4:290666/138‑1 (MQ=255) aTAAAACGCTGAATAGGAAAAGCCGGATTCGCTTTTTCAATCCCGATTTTTCGTATGCCTTCACGGACAATGATATTGTTCCGAACGTCCGAATGCTGAATGAGATGTAAAAAAGCGGCTGCATCATGGTCATCTTCa > 6:228586/1‑138 (MQ=255) tAAAACGCTGAATAGGAAAAGCCGGATTCGCGTTTTCAATCCCGATTTTTCGTATGCCTTCACGGACAATGATATTGTTACGATCGGCCGAATGCTGAATTAGATGTAAAAAAGCGGCTGCAGGATGGTCCTCTTCaa > 2:402190/1‑138 (MQ=255) cGCTGAATAGGATAAGCCGGATTCGCTTTTTGGATAACGAGATTTCGTTTGCCGTCACCGTCAATTATATTGTGGGGATCGGCGCAATGCGTAATGCGTGGTTAAAAAGCGGCTGCATCATGGGAATCTTCAGAGatt > 4:421367/1‑138 (MQ=255) cGCTGAATAGGAAAAGCCGGATTCGCTTTTTCAATCCCGATTTTTCGTATGCCTTCACGGACAATGATATTGTTCCGATCGTCCGAATGCTGAATGAGATGTAAAAAAGCGGCTGCATCATGGTCATCTTCAAAGatta > 2:396687/1‑139 (MQ=255) cGCTGAATAGGAAAAGCCGGAGTCGCATATTCAAAACAGAAATTAAGAATGACTAAAAGGACCAAAAAATTGTTACCATCCTCCGAAAGATGAATCAGAAGTAAAAAAGAGCCTGAATCATCGTAATCTTCAAAGatta > 4:293194/1‑139 (MQ=255) tGAATAGGAAAAGCCGGATTCGCTTTTTCAATCCCGATTTTTCGTATGCCTTCACGGACAATGATATTGTTCCGATCGTCCGAATGCTGAATGAGATGTAAAAAAGCGGCTGCATCATGGTCATCTTCAAAGattatt > 4:284574/1‑138 (MQ=255) tGAATAGGAAAAGCCGGATTCGCTTTTTAAATCCCGATTTTTGGTATGAATTCACGGAAAATGATATTGTTCCGATCCTCCGAATGATGAATGAGATGTAAAAAAGCGGCTGCATCATGGTCATCTTCAAACATTAttt > 4:137633/1‑139 (MQ=255) aaTAGGAAAAGCCGGATTCGCTTTTTCAATCCCGATTTTTCGTATGCCTTCACGGACAATGATATTGTTCCGATCGTCCGAATGCTGAATGAGATGTAAAAAAGCGGCTGCATCATGGTCATCTTCAAAGATTATTTc > 5:408262/1‑138 (MQ=255) tccgAAAAGCCGGATTCGCTTTTTCAATCCCGATTTTTCTTATCCCTACACGCACAATGATTTTGTGCCGAGCGGCCGAATGCTCAATGAGATGAAAAAACGCGGCTGCATCATGGTCATCTTCAAAGATTATTTCAAg < 1:184936/136‑1 (MQ=255) ggAAAAGCCGGATTCGCTTTTTCAATCCCGATTTTTCGTATGCCTTCACGGACAATGATATTGTTCCGAGCGTCCGAATGCTGAATGAGATGTAAAAAAGCGGCTGCATCATGGTCATCTTCAAAGATTATTTCAAGc < 3:97506/138‑1 (MQ=255) gCCGGATTCGCTTTTTCAATCCCGATTTTTCGTATGCCTTCACGGACAATGATATTGTTCCGATCGTCCGAATGCTGAATGAGATGTAAAAAAGCGGCTGCATCATGGTCATCTTCAAAGATTATTTCAAGCATGTTTg > 3:348323/1‑139 (MQ=255) gCCGGATTCGCTTTTTCAATCCCGATTTTTCGTATGCCTTCACGGACAATGATATTGTTCCGATCGTCCGAATGCTGAATGAGATGTAAAAAAGCGGCTGCATCATGGTCATCTTCAAAGATTATTTCAAGCATGTTTg > 7:285869/1‑139 (MQ=255) gCCGGATTCGCGTTTTAAATACCGAATTTTCGTATGCCTTCACGGACAATTATATTGTTACGATCCTACGAATGCTGAATGACATTTAAAAAAGCGGCTGCATCCTGTTCATCTTCAAAGATTATTTCAAGAATGtttt > 6:34722/1‑138 (MQ=255) cgtaTTCGCTTTTTCAATCCCGATTTTTCGTATGCGTTCCCGGACATTTATATTGTTCCGTTCGTCCGAATGCTGAATGAGTTTTAAAAAAGCGGCTGCATCATGGTCATCTTCAAAGATTATTTCAAGCATGTTTGTc < 3:137633/136‑1 (MQ=255) cgtaTTCGCTTTTTAAATCCCTATTTTTCTTATGCCTTCCCGGACAATGATATTGTTCCGATCGTCCGAATGCTGAATGATATGTAAAAACGCGGCTGCATCATGGTCATCTTCAAAGATTATTTCAAGCATGTTTGTc < 5:275393/136‑1 (MQ=255) cGGATTCGATTTTTCAAGCCGGATTTTTCGTATGCATACACGGACAATGATATTGTGCCGATCGTCCGAAGGCTGAATGAGATGTAAAAACGCGGCTGCATCATGGTCATCTTCAAAGATTATTTCAAGCATGTTTGTc < 7:12250/139‑1 (MQ=255) aggATTCGATTTTTCTATCATGATTTGTCGTAAGACATCCCGCACAATGATATTGGTCCGATGCTCCTACTGCATAAAGAGCTCTAAAACAGCGGCTGCATCATGGTCATCTTCAAAGATTATTTCAAGCATGTTTGTc < 7:191775/138‑1 (MQ=255) ggATTCGCTTTTTCAATCCCGATTTTTCGTATGCCTTCACGGACAATTATATTGTTCCGAGCGGCCGAATGCTGAATGAGATGAAAAAACGCGGCTGCATCATGGTCATCTTCAAAGATTATTTCAAGCATGTTTGTcc < 3:4154/139‑1 (MQ=255) gATTCGCTTTTTCAATCCCGATTTTTCGTATGCCTTCACGGACAATGATATTGTTCCGATCGTCCGAATGCTGAATGAGATGTAAAAAAGCGGCTGCATCATGGTCATCTTCAAAGATTATTTCAAGCATGTTTGTccc < 8:101580/139‑1 (MQ=255) aTTCGCTTTTTCAATCCCGATTTTTCGTATGCCTTCACGGACAATGATATTGTTCCGATCGTCCGAATGCTGAATGAGATGTAAAAAAGCGGCTGCATCATGGTCATCTTCAAAGATTATTTCCAGCTTGTTTGTcccc > 6:306948/1‑139 (MQ=255) aTTCGCTTTTTCAATCCCGATTTTTCGTATGCCTTCACGGACAATGATATTGTTCCGATCGTCCGAATGCTGAATGAGATGTAAAAAAGCGGCTGCATCATGGTCATCTTCAAAGATTATTTCAAGCATGTTTGTcccc > 6:168236/1‑139 (MQ=255) aTTCGCTTTTTCAATCCCGATTTTTCGTATGCCTTCACGGACAATGATATTGTTCCGATCGTCCGAATGCTGAATGAGATGTAAAAAAGCGGCTGCATCATGGTCATCTTCAAAGATTATTTCAAGCATGTTTGTcccc > 1:158221/1‑139 (MQ=255) aTTCGCTTTTTAAATCCCGATTTTTAGTATGCCGTCACGGACAATGATATTTTTACGGTCGTCCGTATGGGGAATGAGATGTAAAAAAGCGGCTGGATCATGGTCATCTTCAAAGATTATTTCAAGCATGTTTGTcccc > 2:172991/1‑139 (MQ=255) ttCGCTTTTTCAATCCCGATTTTTCGTATGCCTTCCCGGACAATTTTTTTGTTCCGATCGTCCGAATGCTGAATGAGATGTAAAAAAGCGGCTGCATCATGGTCATCTTCAAAGATTATTTCAAGCATGTTTGTccccc < 2:80149/139‑1 (MQ=255) tttttCAATCCCGATTTTTCGTATGCCTTCACGGACAATGATATTGTTCCGATCGTCCGAATGCTGAATGAGATGTAAAAAAGCGGCTGCATCATGGTCATCTTCAAAGATTATTTCAAGCATGTTTGTc > 6:165881/1‑130 (MQ=255) tttttCAATCCCGATTTTTCGTATGCCTTCACGGACAATGATATTGTTCCGATCGTCCGAATGCTGAATGAGATGTAAAAAAGCGGCTGCATCATGGTCATCTTCAAAGATTATTTCAAGCATGTTTGTc < 5:165881/130‑1 (MQ=255) tttttCAATCCCGATTTTTCGTATGCCTTCACGGACAATGATATTGTTCCGATCGTCCGAATGCTGAATGAGATGTAAAAAAGCGGCTGCATCATGGTCATCTTCAAAGATTATTTAAAGCATGTTTGTCCCCCCTTAc > 3:112151/1‑139 (MQ=255) aaTCCCTTTTTTTCTTATGCCTTACCGGACAATTATATTGTCCCGATCGTCCGAATGCTGAATGATATTAAAAAACGCGGCTGCATCATGGTCATCTTCAAAGATTATTTCAAGCATGTTTGTCCCCCCTTACGGCAt < 3:284574/138‑1 (MQ=255) aaTCCCTATTTTTCTTATGCCTTCACGTACAATTATTTTGTTCCGTTCGTCCTAATGCTGAATGTGATGTAAAAAAGCGGCTGCATCATGGTCATCTTCAAAGATTATTTCAAGCATGTTTGTCCCCCCTTACGGCAt < 3:135252/138‑1 (MQ=255) tCCCTATTTTTCGTCTGCTTTCCCGTAAATTGATTTTGTACCGATCGTACGATTTGTTAATGTTTTTAAAAAAAGCGGCTGCATCATGGTCATCTTCAAAGATTATTTCAAGCATGTTTGTCCCCCCTTACGGCAt < 6:359034/136‑1 (MQ=255) tCCCGATTTTTCGTATGCCTTCACGGACAATGATATTGTTCCGATCGTCCGAATGCTGAATGAGATGTAAAAAAGCGGCTGCATCATGGTCATCTTCAAAGATTATTTCAAGCATGTTTGTCCCCCCTTACGGCATCTg > 3:93858/1‑139 (MQ=255) cccGATTTTTCGTATGCCTTCACGGACAATGATATTGTTCCGATCGTCCGAATGCTGAATGACATGAAAAAAAGCGGCTGCATCATGGTCATCTTCAAAGATTATTTCAAGCATGTTTGTCCCCCCTTACGGCATCTGt < 5:419380/139‑1 (MQ=255) cGATTTTTCTTATCCCTTCCCGGACAATGATATTGTTCCGATCGACCGAATGCTGAATGAGATGAAAAAACGCGGCTGCATCATGGTCATCTTCAAAGATTATTTCAAGCATGTTTGTCCCCCCTTACGGCATCTGTTa < 3:432166/139‑1 (MQ=255) gATTTTTGGTATGCCTTCACTTACAATGATATTTTTCCTTTCGTCCGATTGCTCAATGCGATGTAAAACAGCGGCTGCATCATGGTCATCTTCAAAGATTATTTCAAGCATGTTTGTCCCCCCTTACGGCATCTGTTAc < 8:260787/139‑1 (MQ=255) gATTTTTCGTATGCCTTCACGGACAATGATATTGTTCCGATCGTCCGAATGCTGAATGAGATGTAAAAAAGCGGCTGCATCATGGTCATCTTCAAAGATTATTTCAAGCATGTTTGTCCCCCCTTACGGCATCTGTTAc < 8:146566/139‑1 (MQ=255) gATTTTTCGTATGCCTTCACGGACAATGATATTGTTCCGATCGTCCGAATGCTGAATGAGATGTAAAAAAGCGGCTGCATCATGGTCATCTTCAAAGATTATTTCAAGCATGTTTGTCCCCCCTTACGGCATCTGTTAc < 1:396687/139‑1 (MQ=255) gATTTTTCGTATGCCTTCACGGACAATGATATTGTTCCGATCGTCCGAATGCTGAATGAGATGTAAAAAAGCGGCTGCATCATGGTCATCTTCAAAGATTATTTCAAGCATGTTTGTCCCCCCTTACGGCATCTGTTAc < 3:175106/139‑1 (MQ=255) gATTTTGCGTATGCCTCCACGGACAATGATATTGTTCCGATCGCCCGAATGCGGAATGCGATGTAAAAACGCGGCTGCATCATGGTCATCTTCAAAGATTATTTCAAGCATGTTTGTCCCCCCTTACGGCATCTGTTAc < 8:370711/139‑1 (MQ=255) gATTTTGCGTATCCCTACACCCACATTTATATTGTACCGAGCGTCCAAATGATGATTCAGATCTAAAAAAGCGGCTGCATCATGGTCATCTTCAAAGATTATTTCAAGCATGTTTGTCCCCCCTTACGGCATCTGTTAc < 2:217575/139‑1 (MQ=255) ttttttGTTATCCTTTCAGGGAAATTGATATTGTTCGGATGGTCCTTTTGCTTATTTTGATTTAAAAAAGCGGCTGCATCATGGTCATCTTCAAAGATTATTTCAAGCATGTTTGTCCCCCCTTACGGCATCTGTTAc < 5:34722/137‑1 (MQ=255) ttttttCTTTTGCATTCACGCAAATTTATTTTGTTCGTAGAGTCCTATTGTTTAATGATATTTAAAAACGCGGCTGCATCATGGTCATCTTCAAAGATTATTTCAAGCATGTTTGTCCCCCCTTACGGCATCTGTTAc < 1:421965/137‑1 (MQ=255) ttttCGTATGCCTCCAGGTAAATTGATTTTGTGCGGAGCGTCCTAATGCTTAATGCTATGAAAAAAAGCGGCTGCATCATGGTCATCTTCAAAGATTATTTCAAGCATGTTTGTCCCCCCTTACGGCATCTGTTACaa < 4:348323/138‑1 (MQ=255) tttCGTATTCCTTCACGGAAAATGATTTTGTTCCGATGGTCCGAATGCTTAATGATATGTAAAAAAGCGGCTGCATCATGGTCATCTTCAAAGATTATTTCAAGCATGTTTGTCCCCCCTTACGGCATCTGTTACAAg < 6:162615/138‑1 (MQ=255) aTGCCTTCACGTAAAATTATATTGTTCCGATCGTCCTAATGCTTAATGAGTTGTAAAAACGCGGCTGCATCATGGTCATCTTCAAAGATTATTTCAAGCATGTTTGTCCCCCCTTACGGCATCTGTTACAAGtata < 1:393140/136‑1 (MQ=255) cACGGACAATGATATTGTTCCGATCGTCCGAATGCTGAATGAGATGTAAAAAAGCGGCTGCATCATGGTCATCTTCAAAGATTATTTCAAGCATGTTTGTCCCCCCTTACGGCATCTGTTACAAGTATATGGGGGATGt > 1:10592/1‑139 (MQ=255) aCAATGATATTGTTCCGATCGTCCGAATGCTGAATGAGATGTAAAAAAGCGGCTGCATCATGGTCATCTTCAAAGATTATTTCAAGCATGTTTGTCCCCCCTTACGGCATCTGTTACAAGTATATGGGGGATGttttt > 8:141153/1‑138 (MQ=255) tGATATTGTCCCGATCGTCCGAATGCTGAATGAGATGTAAAAAAGCGGCTGCATCATGGTCATCTTCAAAGATTATTTCAAGCATGTTTGTCCCCCCTTACGGCATCTGTTACAAGTATATGGGGGATGTTTTTAAAAt < 5:144628/139‑1 (MQ=255) gATATTGTTCCGATCCTCCTAATCCTGAATGATATGTAAAAAAGCGGCTGCATCATGGTCATCTTCAAAGATTATTTCAAGCATGTTTGTCCCCCCTTACGGCATCTGTTACAAGTATATGGGGGATGTTTTTAAAAt < 1:402190/138‑1 (MQ=255) tGTTCCGATCGTCCGAATGCTGAATGAGATGTAAAAAAGCGGCTGCATCATGGTCATCTTCAAAGATTATTTCAAGCATGTTTGTCCCCCCTTACGGCATCTGTTACAAGTATATGGGGGATGTTTTTAAAATAGACg > 5:76885/1‑138 (MQ=255) tGTTCCGATCGTCCGAATGCTGAATGAGATGTAAAAAAGCGGCTGCATCATGGTCATCTTCAAAGATTATTTCAAGCATGTTTGTCCCCCCTTACGGCATCTGTTACAAGTATATGGGGGATGTTTTTAAAATAGACg > 6:63674/1‑138 (MQ=255) ttCCGATCGTCCGAATGCTGAATGAGATGTAAAATAGCGGCTGCATCATGGTCATCTTCAAAGATTATTTCAAGCATGTTTGTCCCCCCTTACg < 6:394545/94‑1 (MQ=255) ttCCGATCGTCCGAATGCTGAATGAGATGTAAAAAAGCGGCTGCATCATGGTCATCTTCAAAGATTATTTCAAGCATGTTTGTCCCCCCTTACg > 5:394545/1‑94 (MQ=255) ttCCGATCGTCCGAATGCTGAATGAGATGTAAAAAAGCGGCTGCATCATGGTCATCTTCAAAGATTATTTCAAGCATGTTTGTCCCCCCTTACGGCATCTGTTAc < 3:78675/105‑1 (MQ=255) ttCCGATCGTCCGAATGCTGAATGAGATGTAAAAAAGCGGCTGCATCATGGTCATCTTCAAAGATTATTTCAAGCATGTTTGTCCCCCCTTACGGCATCTGTTAc > 4:78675/1‑105 (MQ=255) ttCCGATCGTCCGAATGCTGAATGAGATGTAAAAAAGCGGCTGCATCATGGTCATCTTCAAAGATTATTTCAAGCATGTTTGTCCCCCCTTACGGCATCTGTTACAAGTATATGGGGGATGTTTTTAAAATAGACGTa > 7:326710/1‑138 (MQ=255) ccGATCGTCCGAATGCTGAATGAGATGTAAAAAAGCGGCTGCATCATGGTCATCTTCAAAGATTATTTCAAGCATGTTTGTCCCCCCTTACGGCATCTGTTACAAGTATATGGGGGATGTTTTTAAAATAGACGTAAAg > 7:188482/1‑139 (MQ=255) cGATCGTCCGAATGCTGAATGAGATGTAAAAAAGCGGCTGCATCATGGTCATCTTCAAAGATTATTTCAAGCATGTTTGTCACCCCTTACGGCATCTGTTACAAGTATATGGGGGATGTTTTTAAAATAGACTTAAAgg > 3:282874/1‑139 (MQ=255) aTCGTCCGAATGCTGAATGAGATGTAAAAAAGCGGCTGCATCATGGTCATCTTCAAAGATTATTTCAAGCATGTTTGTc > 3:309940/1‑79 (MQ=255) aTCGTCCGAATGCTGAATGAGATGTAAAAAAGCGGCTGCATCATGGTCATCTTCAAAGATTATTTCAAGCATGTTTGTc < 4:309940/79‑1 (MQ=255) aTCGTCCGAATGCTGAATGAGATGTAAAAAAGCGGCTGCATCATGGTCATCTTCAAAGATTATTTCAAGCATGTTTGTCCCCCCTTACGGCATCTGTTACAAGTATATGGGGGATGTTTTTAAAATAGACGTAAAGGt > 3:56054/1‑138 (MQ=255) aTCGTCCGAATGCTGAATGAGATGTAAAAAAGCGGCTGCATCATGGTCATCTTCAAAGATTATTTCAAGCATGTTTGTCCCCCCTTACGGCATCTGTTACAAGTATATGGGGGATGTTTTTAAAATAGACGTAAAGGt > 3:328783/1‑138 (MQ=255) aTCGTCCGAATGCAGAAGGAGATGTAAAAAAGCGGCTGCATCATGGTCAGCTTCAAAGCTGATTGCACGCAGGTTTGTCCCCCCTTACGGCATCTGATACAAGTAGATGGGGGGTGTTGTGAAAATAGCCGTAACGGt > 8:101161/1‑138 (MQ=255) tCGTCTGAATGCTGAATGATATTTAAAAACGCTGCTGCATCATGGTCATCTTCAAAGAGTATTTCAAGCATGTTTGTCCCCCCTTACGGCATCTGTTACAAGTATATGGGGGATGTTTTTAAAATAGACGTATAGGTc < 5:5095/138‑1 (MQ=255) ccGAATGCTGAATGAGATGTAAAAAAGCGGCTGCATCATGGTCATCTTCAAAGATTATTTCAAGCATGTTTGTCCCCCCTTACGGCATCTGTTACAAGTATATGGGGGATGTTTTTAAAATAGACGTAAAGGTCATTgg > 5:67634/1‑139 (MQ=255) ctaaTGCTGAATGTTTTTTAAAAAAGCGGCTGCATCATGGTCATCTTCAAAGATTATTTCAAGCATGTTTGTCCCCCCTTACGGCATCTGTTACAAGTATATGGGGGATGTTTTTAAAATAGACGTAAAGGTCATTGGc < 3:293194/137‑1 (MQ=255) ccaaTGATTAAGGATATGAATAAAAGCGTCTGCATCATGGTCATCTTCAAAGATTATTTCAAGCATGTTAGTCCCCCCTTACGGCATCTGTTACAAGTATATGGGTGATGTTTTTAAAATAGACGTAAAGGTCATTGGc < 3:247993/137‑1 (MQ=255) gAATGCTGAATGAGATGTAAAAAAGCGGCTGCATCATGGTCATCTTCAAAGATTATTTCAAGCATGTTTGTCCCCCCTTACGGCATCTGTTACAAGTATATGGGGGATGTTTTTAAAATAGACGTAAAGGTCATTGGCa < 7:141153/139‑1 (MQ=255) aaTGAGATGTAAAAAAGCGGCTGCATCATGGTCATCTTCAAAGATTATTTCAAGCATGTTTGTCCCCCCTTACGGCATCTGTTACAAGTATATGGGGGATGTTTTTAAAATAGACGTAAAGGTCATTGGCAAATCTTaa > 3:30112/1‑139 (MQ=255) aTGTAAAAAAGCGGCTGCATCATGGTCATCTTCAAAGATTATTTCAAGCATGTTTGTCCCCCCTTACGGCATCTGTTACAAGTATATGGGGGATGTTTTTAAAATAGACGTAAAGGTCATTGGCAAATCt > 2:246549/1‑130 (MQ=255) aTGTAAAAAAGCGGCTGCATCATGGTCATCTTCAAAGATTATTTCAAGCATGTTTGTCCCCCCTTACGGCATCTGTTACAAGTATATGGGGGATGTTTTTAAAATAGACGTAAAGGTCATTGGCAAATCt < 1:246549/130‑1 (MQ=255) tGTAAAAAAGCGGCTGCATCATGGTCATCTTCAAAGATTATTTCAAGCATGTTTGTCCCCCCTTACGGCATCTGTTACAAGTATATGGGGGATGTTTTTAAAATAGACGTAAAGGTCATTGGCAAATCTTAATTTGAtt > 3:376917/1‑139 (MQ=255) tGTAAAAAAGCGGCTGCATCATGGTCATCTTCAAAGATTATTTCAAGCATGTTTGTCCCCCCTTACGGCATCTGTTACAAGTATATGGGGGATGTTTTTAAAATAGACGTAAAGGTCATTGGCAAATCTTAATTTGAtt > 3:60488/1‑139 (MQ=255) | AATTTGACCAGAATCGGCTCCATAAAACGCTGAATAGGAAAAGCCGGATTCGCTTTTTCAATCCCGATTTTTCGTATGCCTTCACGGACAATGATATTGTTCCGATCGTCCGAATGCTGAATGAGATGTAAAAAAGCGGCTGCATCATGGTCATCTTCAAAGATTATTTCAAGCATGTTTGTCCCCCCTTACGGCATCTGTTACAAGTATATGGGGGATGTTTTTAAAATAGACGTAAAGGTCATTGGCAAATCTTAATTTGATT > CP006881/2780110‑2780374 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |