| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP006881 | 186,066 | T→G | 20.3% | K126N (AAA→AAC) | U712_00845 ← | Uncharacterized protein ybbC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 186,066 | 0 | T | G | 20.3% | 118.9 / 13.1 | 75 | K126N (AAA→AAC) | U712_00845 | Uncharacterized protein ybbC |
| Reads supporting (aligned to +/- strand): ref base T (12/47); new base G (13/3); total (25/50) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.26e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
ATAAATGGAATGCCGTTTTCTTTAGCGGCTTCCATTGCGTATGCCATTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTC‑GGTTTTTTCGTTTTTCCGTAGAGGCTGTATACGGGAACCCCGGTTTTTTCGTCAATGTAAGAGCCTACTTCGTCTCCAGCCTGGGCGTCACCGCGGACGCCGTGTTCAGGGCCGAATAAAGCTGTCAGTTTGATATCCGGG > CP006881/185932‑186204 | aTAAATGGAATGCCGTTTTCTTTAGCGGCTTCCATTGCGTATGCCATTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTC‑GGgtttt > 1:239406/1‑139 (MQ=255)aTAAATGGAATGCCGTTTTCTTTAGCGGCTTCCATTGCGTATGCCATTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCATGAATGTCAAACATTAGATTATCGACATTTTTAAGCATTTCTGGAGTA‑GGttttt > 5:436619/1‑139 (MQ=255) tAAATGGAATGCCGTTTTCTTTATCGGATACCATAGATTAAGCCATTGTATAAATGTACGAGTAGAAACGTGTCCCGACATCCATAAAGTCAAACATTAGAATATCGAAAAATTAAAGAAATTCAGGAGTC‑GGttttgt > 6:172384/1‑137 (MQ=255) tAAATGGAATGCCGTTTTCTTTAGCGGCTTCCATTGCGTATGCCATTGTTTAAATGTTCGTGTAGAAACGGGTCCCGACATCCTGACTGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTC‑GGtgtttt > 7:86494/1‑139 (MQ=255) tAAATGGAATGCCGTTTTCTTTAGCGGCTTCCATTGCGTATGCCATTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGTCATTTTTAAGCATTTCTGGAGTC‑GGgttttt > 5:387172/1‑139 (MQ=255) tAAATGGAATGCCGTTTTCTTTAGCGGCTTCCATTGCGTATGCCATTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTC‑GGtttttt > 3:192090/1‑139 (MQ=255) tAAATGGAATGCCGTTTTCTTTAGCGGCTTCCATTGCGTATGCCATTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTC‑GGtttttt > 1:182958/1‑139 (MQ=255) tAAATGGAATGCCGTTTTCTTTAGCGGCTTCCATTGCGTATGCCATTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTC‑GGtttttt > 3:380377/1‑139 (MQ=255) tAAATGGAATGCCGTTTTCTTTAGCGGCTTCCATTGCGTATGCCATTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTC‑GGtttttt > 8:153668/1‑139 (MQ=255) tAAATGGAATGCCGTTTTCTTTAGCGGCTTCCATTGCGTATGCCATTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTC‑GGtttttt > 6:392705/1‑139 (MQ=255) tAAATGGAATGCCGTTTTCTTTAGCGGCTTCCATTGCGTATGCCATTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTC‑GGtgtttt > 3:342758/1‑139 (MQ=255) tAAATGGAATGCCGTTTTCTTTAGCGGCTTCCATTGCGTATGCCATTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTC‑GGgttttt > 8:34895/1‑139 (MQ=255) tAAATGGAATGCCGTTTTCTTTAGCGGCTTCCATTGCGTATGCCATTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTC‑GGgttttt > 6:378634/1‑139 (MQ=255) tAAATGGAATGCCGTTTTCTTTAGCGGCTTCCATTGCGTATGCCATTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTC‑GGgttttt > 2:238312/1‑139 (MQ=255) tAAATGGAATGCCGTTTTCTTTAGCGGCTTCCATTGCGTATGCCATTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTC‑GGgttttt > 1:441043/1‑139 (MQ=255) tAAATGGAATGCCGTTTTCTTTAGCGGCTTCCATTGCGTATGCCATTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTC‑GGgttttt > 8:388619/1‑139 (MQ=255) tAAATGGAATGCCGTTTTCTTTAGCGGCTTCCATTGCGTATGCCATTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTC‑GGgttttt > 1:21395/1‑139 (MQ=255) tAAATGGAATGCCGTTTTCTTTAGCGGCTTCCATTGCGTATGCCATTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTC‑GGggtttt > 7:113013/1‑139 (MQ=255) tAAATGGAATGCCGTTTTCTTTAGCGGCTTCCATTGCGTATGCCATTGTATAAATGTACGTGTAGAAACGGGTCCCGACATACTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTA‑GGggtttt > 1:154878/1‑139 (MQ=255) tAAATGGAATGCCGTTTTCTTTAGCGGCTTCCATTGAGTATGCCATTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCATACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTC‑GGggtttt > 5:394504/1‑139 (MQ=255) tAAATGGAATGCCGTTTTAATTAGCGGCTTCCATTGCGTTTGCCATTGTATAAATGTAAGTGTAGAAACGGGTCCCGACATCCTGAAAGTCAAACATTATAAAATCGACATTATTAAGCATTTCTGGAGTA‑GGttattt > 2:405545/1‑139 (MQ=255) tAAATGGAAAGCCTTTTTATTTAGAGGCATCCATTGCGTATGCCATAGTATAAATGTACGAGTAGAAACTGGTCACGACAAACTGAATGTCAAACAATAGAATATCGACATTTTTAAGCATTTCTGCAGTC‑GGtttttt > 6:360758/1‑139 (MQ=255) tGGAATGCCGTTTTCTTTAGCGGCTTCCATTGCGTATGCCATTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTC‑GGTTTTTTCGtt < 1:56235/139‑1 (MQ=255) tGGAATGCCGTTTTCTTTAGCGGCTTCCATTGCGTATGCCATTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTC‑GGTTTTTTCGtt < 3:115157/139‑1 (MQ=255) gtaTGCCGTTTTCTTTAGCGTCTTCCATTGCGTATGCAATTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTC‑GGGTTTTTCGttt < 5:172384/136‑1 (MQ=255) aaTGCCGTTTTCTTTAGCGGCTTCCATTGCGTATGCCATTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTC‑GGTTTTTTTGttttt > 4:165565/1‑139 (MQ=255) aTGCCGTTTTCTTTAGCGGCTTCCATTGCGTATGCCATTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTC‑GGgtttttcgtttttc > 3:341380/1‑139 (MQ=255) aTGCCGTTTTCTTTAGCGGCTTCCATTGCGTATGCCATTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTC‑GGTTTTTTGGTTTTTc > 3:342670/1‑139 (MQ=255) aTGCCGTTTTCTTTAGCGGCTTCCATTGCGTATGCCATTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTC‑GGGTTTTTGGgttttg > 8:33280/1‑138 (MQ=255) aTGCCGTTTTCTTTAGCGGCTTCCATTGCGTATGCCATTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTAAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTCGGGTTTTTTGGttttt > 2:295934/1‑139 (MQ=255) aTGCCGTTTTCTTTAGCGGCTACCATTGCGTATGCCATTGTATAAATGTACGTTTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCTTTTCTGGAGTC‑GGGTTGTTGGgttttg > 3:318158/1‑138 (MQ=255) cGTTTTCTTTAGCGGCTTCCATTGCGTATACCATTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTC‑GGTTTTTTCGTTTTTCCGTa < 7:102081/139‑1 (MQ=255) gTTTTCTTTAGCGGCTTCCATTGCGTATGCCATTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTC‑GGTTTTTTCGTTTTTCCGTag < 2:441043/139‑1 (MQ=255) ttCTTTAGCGGCTTCCATTGCGTATGCCATTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTC‑GGTTTTTTCGTTTTTCCGTagag < 7:33280/138‑1 (MQ=255) ttCTTTAGCGGCTTCCATTGCGTATGCCATTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTC‑GGTTTTTTAGTTTTTCCGTattgg > 6:71422/1‑135 (MQ=255) agcTTTAGCGGCTTCGATTGCGTATGCCATTGTATAAATGTACGTGTAGAAACGGGTCCCGAAATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTC‑GGTTTTTTCGTTTTTCCGTAGAgg < 1:55554/137‑1 (MQ=255) tCTTTAGCTGCTTCCATTGCGTATGCCATTGTATAAATGTACGTGTAGAAACGTGTCCCGACATCCTGAATGTCATACATTAGAATATCTACATTTTTAATCATTTCTTTAGTC‑GGTTTTTTCGTTTTTCCGTAGAgg < 4:318158/138‑1 (MQ=255) tCTTTAGCGGCTTCCATTGCGTATGCCATTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGTCATTTTTAAGCATTTCTGGAGTC‑GGTTTTTTCGTTTTTCCGTAGAgg < 6:387172/138‑1 (MQ=255) tCTTTAGCGGCTTCCATTGCGTATGCCATTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTC‑GGTTTTTTCGTTTTTCCGTAGAgg < 4:341380/138‑1 (MQ=255) tCTTTAGCGGCTTCCATTGCGTATGCCATTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTC‑GGTTTTTTCGTTTTTCCGTAGAgg < 7:357946/138‑1 (MQ=255) tCTTTAGCGGCTTCCATTGCGTATGCCATTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTC‑GGTTTTTTCGTTTTTCCGTAGAgg < 1:133748/138‑1 (MQ=255) tCTTTAGCGGCTTCCATTGCGTATGCCATTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTC‑GGTTTTTTCGTTTTTCCGTAGAgg < 2:182958/138‑1 (MQ=255) tCTTTAGCGGCTTCCATTGCGTATGCCATTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTC‑GGTTTTTTCGTTTTTCCGTAGAgg < 3:44643/138‑1 (MQ=255) tAGCGGCTTCCATTGCGTATGCCATTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTC‑GGTTTTTTCGTTTTTCCGTAGAGGCt < 7:388619/136‑1 (MQ=255) cGTATGCCATTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTC‑GGTTTTTTGGTTTTTTAGTATAGGCTGTATAATGGTAACCCGGt > 8:14968/1‑139 (MQ=255) gCCATTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTC‑GGTTTTTTAGTTTTTGAGTAGAGGCGGTTTAAGGGAACCCCGGgttttt > 3:81204/1‑139 (MQ=255) aTTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGAGATTTTTAAGCATTTCTGGAGTC‑GGTTTTTTCGTTTTTCCGTAGAGGCTGTATACGGGAACCCCGGTTTTTTCGt < 1:259822/139‑1 (MQ=255) aTTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTC‑GGTTTTTTCGTTTTTCCGTAGAGGCTGTATACGGGAACCCCGGTTTTTTCGt < 7:14968/139‑1 (MQ=255) aTTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTC‑GGTTTTTTCGTTTTTCCGTAGAGGCTGTATACGGGAACCCCGGTTTTTTCGt < 3:40252/139‑1 (MQ=255) aTTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTC‑GGTTTTTTCGTTTTTCCGTAGAGGCTGTATACGGGAACCCCGGTTTTTTCGt < 7:301753/139‑1 (MQ=255) aTTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTC‑GGTTTTTTCGTTTTTCCGTAGAGGCTGTATACGGGAACCCCGGTTTTTTCGt < 2:31693/139‑1 (MQ=255) aTTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTC‑GGTTTTTTCGTTTTTCCGTAGAGGCTGTATACGGGAACCCCGGTTTTTTCGt < 2:357750/139‑1 (MQ=255) tGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTC‑GGTTTTTTGGTTTTTACGTAGAGGCTGTGTAAGGGTACCCCGGTGTTTTCGTc > 6:311847/1‑138 (MQ=255) tGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTC‑GGTTTTTTAGTTTTTGCTTATAGGCTGTATAAGGGTACACCGGGTTTTTAGTc > 6:360909/1‑138 (MQ=255) tGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTC‑GGGTTTTTCGTTTTTACGTTGAGGCTGTATAAGGGAACACCGGGTTTTTTGta > 8:334077/1‑137 (MQ=255) aaTGTACGTGTATAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTC‑GGTTTTTTCGTTTTTCCGTAGAGGCTGTATACGGGAACCCCGGTTTTTTCGTCAATGTa < 1:222752/138‑1 (MQ=255) aaTGTACGTGTAGAAACGGGTCCCGAAATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTC‑GGTTTTTTCGTTTTTCCTTAGAGGCTGTATACGGGAACCCCGGTTTTTTCTTCAATGTa < 1:261315/138‑1 (MQ=255) aTGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTC‑GGGTTTTTAGTTTTTCGGTAGAGGGGTTTTTAGGGAACCCCGGGTTTTTGGTGAATGt > 5:192283/1‑136 (MQ=255) tACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTC‑GGTTTTTTCGTTTTTCCGTAGAGGCTGTATACGGGAACCCCGGTTTTTTCGTCAATGTAagag < 4:192090/138‑1 (MQ=255) tACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTC‑GGTTTTTTAGTTTTTCCGTAGAGGCTGTATACGGGCACCCCGGGTTTTTCGGCAATGTAAGAGc > 8:328073/1‑139 (MQ=255) aCGTGTCCAAACGGGGCCCGACATCCTGAATGTCAAACATTTGAAACTCGACATTTTTAAGCATTTCTGGAGTC‑GGTTTTTTCGTTTTTCCGTAGAGGCTGTATACGGGAACCCCGGTTTTTTCGTCAATGTAAGAGcc < 2:239406/139‑1 (MQ=255) cGTGTAGAAACGTGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTC‑GGGGTTTTTGTTTTTCCGTATAGGCTGTATAAGGGGACCCCGGTTTTTTAGTGAATTTTAGAGCCt > 4:179322/1‑139 (MQ=255) cGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTC‑GGTTTTTTAGTTTTTACGTATAGGCTGTTTACGGGAACCCCGGTTTTTTGGTGAATTTAataggc > 7:438661/1‑136 (MQ=255) cGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTC‑GGTGTTTTAGTTTTTCCGTTTAGGCTGTATAAGGGTACCCCGGGTTTTTAGTGAATGTAATAGcc > 8:261952/1‑138 (MQ=255) cGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTC‑GGGTTTTTGGTTTTTGGGTAGATGCTGTATAGGCGGACCCACGGTGTTTGGTACATGTAAGAGcc > 7:315495/1‑138 (MQ=255) cGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTC‑GGGTTTTTGGTTTTTGCGTAGAGGGGGTTTTAGGGAGCCCCGGGTTTTTGGTCAATTTTagaggc > 5:232655/1‑136 (MQ=255) cGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTC‑GGGTGTTTGGGTTTTTCGTTTAGGGGGTTTACGGGGCCCCCCGGTTTTTGGTGATAGTGAGAGcc > 5:48387/1‑138 (MQ=255) cGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTC‑GGGGTTTTAGTTTTTAAGTAGAGGCGGTTTTCGGGTAGCCCGGGTTTTTGGTCGATTTTAGAGcc > 2:369744/1‑138 (MQ=255) tAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTC‑GGTTTTTTCGTTTTTCCGTAGAGGCTGTATACGGGAACCCCGGTTTTTTCGTCAATGTAAGAGCCTACtt < 6:144944/139‑1 (MQ=255) tAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTC‑GGTTTTTTCGTTTTTCCGTAGAGGCTGTATACGGGAACCCCGGTTTTTTCGTCAATGTAAGAGCCTACtt < 4:342758/139‑1 (MQ=255) ctggTCCAGACATCCTGAATGTCAAACATTAGAATATCGTCATTTTTAAGCATTTCTGGAGTC‑GGTTTTTTCGTTTTTCCGTAGAGGCTGTATACGGGAACCCCGGTTTTTTCGTCAATGTAAGAGCCTACTTCGtctc < 1:405545/137‑1 (MQ=255) cGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTC‑GGTTTTTTCGTTTTTCCGTAGAGGCTGTATACGGGAACCCCGGTTTTTTCGTCAATGTAAGAGCCTACTTCGtctc < 3:308307/139‑1 (MQ=255) gTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTC‑GGGTTTTTGGTTTTTTCGTTGAGGGTGTTTTCGGGGACCCCGGGGTTTTTGTGTATTTTAGAGCCTACTTAGtgtgccg > 7:339608/1‑133 (MQ=255) tCCCGACATCCTGAATGTCAAACACTAGAATATCGACATTGTTAAGCATTTCTGGAGTC‑GGTTTTTTCGTTTTTCCGTAGAGGCTGTCTACGGGAACCCCGGTTTTTTCGTCAATGTAAGAGCCTACTTCGTCTCCAGc < 5:392698/139‑1 (MQ=255) ccGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTC‑GGTTTTTTCGTTTTTCCGTAGAGGCTGTATACGGGAAACCCGGTTTTTTCGTCAATGTAAGAGCCTACTTCGTCTCCAGCCt < 4:380377/139‑1 (MQ=255) tGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTC‑GGTTTTTTCGTTTTTCCGTAGAgg < 4:222619/68‑1 (MQ=255) tGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTC‑GGTTTTTTCGTTTTTCCGTAGAgg > 3:222619/1‑68 (MQ=255) tCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTC‑GGTTTTTTCGTTTTTCCGTCGAGGCTGTATACGGGAACCCCGGTTTTTTCGTCAATGTAAGAGCCTACTTCGTCTCCAGCCTGGGCGTCACCGCgg < 3:165565/138‑1 (MQ=255) cAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTC‑GGGTTTTTGGTTTTTTCGTTGAGGCTGTATTCCGGAACCCCGGGTTTTTGGTCAATTTTAGATCCATCTTCGTCTCCCGCCGTGGCGTCACCGCgggc > 7:220886/1‑137 (MQ=255) aaaCATTAGAATATCGACATTTTTAAGCATTTCTGGAGTC‑GGTGTTTTCGTTTTTCCGTAGAGGCTGTATACGGGAACCCCGGTTTTTTCGTCAATGTAAGAGCCTACTTCGTCTCCAGCCTGGGCGTCACCGCGGAc < 7:153668/138‑1 (MQ=255) aCATTATAATATCGACATTTTTAAGCATTGCTGGAGTG‑GGTTTTTTCGTTTTTCCGTAGAGGCTGTATACGGGAACCCCGGTTTTTTCGTCAATGTAAGAGCCTACTTCGTCTCCAGCCTGGGCGTCACCGAGGACGcc < 7:163494/139‑1 (MQ=255) aCATTAGAATATCGACATTTTTAAGCATTTCTGGAGTC‑GGTTTTTTCGTTTTTCCGTAGAGGCTGTATACGGGAACCCCGGTTTTTTCGTCAATGTAAGAGCCTACTTCGTCTCCAGCCTGGGCGTCACCGCGGACGcc < 8:360433/139‑1 (MQ=255) aCATTAGAATATCGACATTTTTAAGCATTTCTGGAGTC‑GGTTTTTTCGTTTTTCCGTAGAGGCTGTATACGGGAACCCCGGTTTTTTCGTCAATGTAAGAGCCTACTTCGTCTCCAGCCTGGGCGTCACCGCGGACGcc < 3:313788/139‑1 (MQ=255) aCATTAGAATATCGACATTTTTAAGCATTTCTGGAGTC‑GGTTTTTTCGTTTTTCCGTAGAGGCTGTATACGGGAACCCCGGTTTTTTCGTCAATGTAAGAGCCTACTTCGTCTCCAGCCTGGGCGTCACCGCGGACGcc < 5:360909/139‑1 (MQ=255) aCATTAGAATATCGACATTTTTAAGCATTTCTGGAGTC‑GGGTTTTTCGTTTTTCCGTAGAGGCTGTATACGGGAACCCCGGTTTTTTCGTCAATGTAAGAGCCTACTTCGTCTCCAGCCTGGGCGTCACCGCGGACGcc < 1:147179/139‑1 (MQ=255) aCATTAGAATATCGACAGTTTTAAGCATTTCTGGAGTC‑GGTTTTTTCGTTTTTCCGTAGAGGCTGTATACGGGAACCCCGGTTTTTTCGTCAATGTAAGAGCCTACTTCGTCTCCAGCCTGGGCGTCACCGCGGACGcc < 2:21395/139‑1 (MQ=255) cATTAGAATATCGACATTTTTAAGCATTTCTGGAGTC‑GGTTTTTTCGTTTTTCCGTAGAGGCTGTATACGGGAACCCCGGTTTTTTCGTCAATGTAAGAGCCTACTTCGTCTCCAGCCTGGGCGTCACCGCGGACGCCg < 7:261952/139‑1 (MQ=255) tAGAATATCGACATTTTTAAGCATTTCTGGAGTC‑GGGTTTTTAGTTTTTTCGTTGAGGCTGTTTAAGGGCACCCCCGGTTTTTGGTCAATGTAAGAGCCTACTTCGTCTCCAGCCTGGGCGGCACCGCGGGCGCCgggt > 3:179016/1‑139 (MQ=255) aaTATCGACATTTTTAAGCATTTCTGGAGTC‑GGTTTTTTCGTTTTTCCGTAGAGGCTGTATACGGGAACCCCGGTTTTTTCGTCAATGTAAGAGCCTACTTCGTCTCCAGCCTGGGCGTCACCGCGGACGCCGTGTTCa < 6:232655/139‑1 (MQ=255) atCGACATTTTTAAGCATTTCTGGAGTC‑GGGTTTTTCGTTTTTCCGTAGAGGCTGTATACGGGAACCCCGGTTTTTTCGTCAATGTAAGAGCCTACTTCGTCTCCAGCCTGGGCGTCACCGCGGACGCCGTGTTCAggg < 7:168248/139‑1 (MQ=255) tCGACATTTTTAAGCATTTCTGGAGTC‑GGTTTTTTCGTTTTTCCGTAGAGGCTGTATACGGGAACCCCGGTTTTTTCGTCAATGTAAGAGCCTACTTCGTCTCCAGCCTGGGCGTCACCGCGGACGCCGTGTTCAggg < 7:328073/138‑1 (MQ=255) tCGACATTTTTAAGCATTTCTGGAGTC‑GGTTTTTTCGTTTTTCCGTAGAGGCTGTATACGGGAACCCCGGTTTTTTCGTCAATGTAAGAGCCTACTTCGTCTCCAGCCTGGGCGTCACCGCGGACGCCGTGTTCAggg < 7:18444/138‑1 (MQ=255) tCGACATTTTTAAGCATTTCTGGAGTC‑GGTTTTTTCGTTTTTCCGTAGAGGCTGTATACGGGAACCCCGGTTTTTTCGTCAATGTAAGAGCCTACTTCGTCTCCAGCCTGGGCGTCACCGCGGACGCCGTGTTCAggg < 7:140056/138‑1 (MQ=255) cGACATTTTTAAGCATTTCTGGAGTC‑GGGTTTTTCGGTTTTACGTAGAGGCTGTATAAGGGAACCCCGGTTTTTTGGTCAATGTAAGAGCCTACTTCGTCGACAGCCTGGGCGTGACCGCGGACGCCGTGTTAAGGGcg > 8:326776/1‑138 (MQ=255) aGCATTTCTGGAGTC‑GGTTTTTTCGTTTTTCCGTAGAGGCTGTATACGGGAACCCCGGTTTTTTCGTCAATGTAAGAGCCTACTTCGTCTCCAGCCTGGGCGTCACCGCGGACGCCGTGTTCAGGGCCGAATAAAGCTg < 6:195507/139‑1 (MQ=255) gCATTTCTGGAGTC‑GGTTTTTTCGTTTTTCCGTAGAGGCTGTATACGGGAACCCCGGTTTTTTCGTCAATGTAAGAGCCTACTTCGTCTCCAGCCTGGGCGTCACCGCGGACGCCGTGTTCAGGGCCGAATAAAGCTGt < 1:238312/139‑1 (MQ=255) cATTGCTGGAGTC‑GGTTTTTTCGTTTTTCCGTAGAGGCTGTATACGGGAACCCCGGTTTTTTCGTCAATGTAAGAGCCTACTTCGTCTCCAGCCTGGGCGTCACCGCGGACGCCGTGTTCAGGGCCGAATAAAGCTGTc < 6:48387/139‑1 (MQ=255) cTGGAGTC‑GGTTTTTTCGTTTTTCCGTAGAGGCTGTATACGGGAACCCCGGTTTTTTCGTCAATGTAAGAGCCTACTTCGTCTCCAGCCTGGGCGTCACCGCGGACGCCGTGTTCAGGGCCGAATAAAGCTGTCAGtt < 5:168826/138‑1 (MQ=255) ttttttCGTTTTTCCGTAGAGGCTGTATACGGGAACCCCGGTTTTTTCGTCAATGTAAGAGCCTACTTCGTCTCCAGCCTGGGCGTCACCGCGGACGCCGTGTTCAGGGCCGAATAAAGCTGTCAGTTTGATATCCggg < 8:438661/139‑1 (MQ=255) | ATAAATGGAATGCCGTTTTCTTTAGCGGCTTCCATTGCGTATGCCATTGTATAAATGTACGTGTAGAAACGGGTCCCGACATCCTGAATGTCAAACATTAGAATATCGACATTTTTAAGCATTTCTGGAGTC‑GGTTTTTTCGTTTTTCCGTAGAGGCTGTATACGGGAACCCCGGTTTTTTCGTCAATGTAAGAGCCTACTTCGTCTCCAGCCTGGGCGTCACCGCGGACGCCGTGTTCAGGGCCGAATAAAGCTGTCAGTTTGATATCCGGG > CP006881/185932‑186204 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |