Predicted mutation | |||||||
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evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | CP006881 | 3,725,239 | 2 bp→AA | 100% | intergenic (‑71/‑457) | U712_19205 ← / → U712_19210 | Uncharacterized protein ywcI/Minor extracellular protease vpr |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | CP006881 | 3,725,239 | 0 | G | A | 100.0% | 209.8 / NA | 61 | intergenic (‑71/‑458) | U712_19205/U712_19210 | Uncharacterized protein ywcI/Minor extracellular protease vpr |
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (40/21); total (40/21) | |||||||||||
Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
* | CP006881 | 3,725,240 | 0 | G | A | 100.0% | 177.8 / ‑6.6 | 61 | intergenic (‑72/‑457) | U712_19205/U712_19210 | Uncharacterized protein ywcI/Minor extracellular protease vpr |
Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (40/20); minor base C (0/1); total (40/21) | |||||||||||
Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
Rejected as polymorphism: Variant not supported by required number of reads on each strand. |
CGTCACCCAGTTCATCAAAAAGACCATCCACACCCGTAAAGATACAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAGC‑C‑TTT‑T‑A‑GCAGCCCGTTTTCTCAGCCGCAGCCCACGGGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGATAGACCGTGGAAAGAGAATTCTTTGTCACAATATGAGTGAAAAAACCAACTAGTTTTTAGAAGTTT > CP006881/3725109‑3725369 || cGTCACCCAGTTCATCAAAAAGACCATCCACACCCGTAAAGATACAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTTGCAGGCAGC‑CTTTT‑T‑A‑GCAGCCCGTTTTCTCAGCCGCAGCCCCCAAGaaaa > 5:122742/1‑138 (MQ=255) cccAGTTCATCAAAAAGACCATCCACACCCGTAAAGATACAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAGC‑CTTTT‑T‑A‑GCAGCCCGTTTTATAAGCCGCCGCCCGCAACAAAAGACGGc > 2:80637/1‑139 (MQ=255) ttCATCAAAAAGACCATCCACACCCGTAAAGATACAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAGC‑CTTTT‑T‑A‑GCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGAtt > 4:378708/1‑139 (MQ=255) ttCATCAAAAAGACCATCCACACCCGTAAAGATACAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAGC‑CTTTT‑T‑A‑GCAGCCCGTTTTCTCAGCCGCAGCCAGCAAGAAAAGACGGCCGaat > 8:429851/1‑137 (MQ=255) ttCATCAAAAAGACCATCCACACCCGTAAAGATACAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAGC‑CGTTT‑T‑A‑GCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGAtt > 1:29366/1‑139 (MQ=255) ttCATCAAAAAGACCATCCACACCCGTAAAGATACAAGCAAACGTTTCATAGAAAAACATCCCTCCGCGTCTTTTTGGCAGGCAGC‑CGTTT‑T‑A‑TCCGCCCGGTTTCTCAGCCGCACCCCCCAAGAAAAGAAGGCCgcgg > 1:160090/1‑136 (MQ=255) caAAAAGACCATCCACACCCGTAAAGATACAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCCGGCAGC‑C‑‑TT‑T‑A‑GCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGAtttcttttc > 3:100804/1‑139 (MQ=255) caAAAAGACCATCCACACCCGTAAAGATACAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAGC‑CTTTT‑T‑A‑GCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGAtttcttt > 8:126288/1‑139 (MQ=255) aaaaaGACCATCCACACCCGTAAAGATACAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAGC‑CTTTT‑T‑A‑GCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGAtttctttt > 4:382248/1‑139 (MQ=255) aGACCATCCACACCCGTAAAGATACAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTATTTTTGGCAGGCAGC‑CTTTT‑T‑A‑ACAGCCCGTTTTCTCATCCCCACCCCGCAACAAAAGACCGCCGATTTATTTTCACg > 7:160644/1‑139 (MQ=255) cccGAAAAGAAACAAGCAACCGTTTCAAAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAGC‑CTTTT‑T‑A‑GCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAACACGGCCGATTTCTTTTCTCGCAAACTAGCGGc < 1:408660/139‑1 (MQ=255) agcttAAAGAAACAAGCAATGGTTTCATAGAAAAACATCCCAGCGATTATTTTTGGCAGGCAGC‑T‑TTT‑T‑ATGCCCCCCTTTTTCCCCGCCGCCGCCCGCACGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGc < 8:123947/135‑1 (MQ=255) tAAAGATACAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCTGGCCGC‑CTTTT‑T‑A‑GCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGGCGAGTTCTTTTGTCGGAAACTAGGGGctc > 1:279595/1‑137 (MQ=255) tAAAGATACAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAGC‑CTTTT‑T‑A‑GCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGctc > 7:136224/1‑137 (MQ=255) tAAAGATACAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAGC‑CTTTT‑T‑A‑GCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTAGCAAACTAGCggggc > 7:397391/1‑134 (MQ=255) tAAAGATACAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAGC‑CTTTT‑T‑A‑GCAGCCCGTTTTCTCAGCCGCAGCCCGCAACAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGctc > 8:242218/1‑137 (MQ=255) acaTACAAGCAAACTTTTCATACAAAAACATCCCTCCGCTTCTTTTTGGCCGGCTGC‑CTTTT‑T‑A‑GCAGCCCGTTTTCTCCGCCGCCGCCCGCAAGAAACGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCa < 7:429851/137‑1 (MQ=255) acaTACAACCAACCTTTGCATAAAAAAACACCCCACCGATTATTTTGGCCCGGCTCC‑A‑TTT‑TAA‑GCAGCCCGTTTCCTCCCCCGCACCCCCAAACAAACCACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCa < 5:140466/137‑1 (MQ=255) aGATACAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAGC‑CTTTT‑T‑A‑GCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCa < 7:126288/139‑1 (MQ=255) aGATACAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAGC‑CTTTT‑T‑A‑GCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCa < 1:80637/139‑1 (MQ=255) aTACAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAGC‑CTTTT‑T‑A‑GCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCGCTAGCaa > 1:49152/1‑138 (MQ=255) tACAAGCAAACGTTTCATAGAAAAAAATCCCTCCCCTTCTTTTTGGCAGGCAGC‑CTTTT‑T‑A‑GAAGCCCGTTTTCTCAGCAGCAGCCCGCAAGAAAAGACGGCCGATTTCTTATCTAGCAAACAATCGGCTCTAGCaac > 7:22241/1‑137 (MQ=255) aCAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAGC‑CTTTT‑T‑A‑GCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAAc > 3:124657/1‑139 (MQ=255) aCAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAGC‑CTTTT‑T‑A‑GCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAAc > 7:345503/1‑139 (MQ=255) aCAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAGC‑CTTTT‑T‑A‑GCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAAc > 3:299563/1‑139 (MQ=255) aCAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAGC‑CTTTT‑T‑A‑GCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAAc > 3:118354/1‑139 (MQ=255) aCAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAGC‑CTTTT‑T‑A‑GCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTAGCAAACTAGCCGCTCAAGCaaaa > 8:282559/1‑138 (MQ=255) aCAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAGC‑CTTTT‑T‑A‑GCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTAATTTATAGCAAACAAGCGGCTCTAGCaaaa > 8:175919/1‑138 (MQ=255) aCAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAGC‑CTTTT‑T‑A‑GCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGAGTTCGTTTCTCGCAAACTAGCGGCTCTAGCAAAAc > 6:120380/1‑139 (MQ=255) aaGCAAACGTTTCATAGAAAAACATCCCTCCGCTTGTTTTTTGCAGGCATCGT‑TTT‑T‑A‑GCAGCCCGTTTTATAAGCCGCAGCCCGCAAGAAAAGACGGACGATTTCTTGTGTGTCAAACATGCGGTTCGAACaaaaat > 6:353776/1‑136 (MQ=255) aaGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAGC‑CTTTT‑T‑A‑GCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTAGCAAACTAGCGGCTCAAGCCAAACt > 4:103100/1‑138 (MQ=255) aaGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAGC‑CTTTT‑T‑A‑GCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGAGTTCTTTTGTAGCCAACTATCGGCGCTAGCAAAAca > 1:230933/1‑137 (MQ=255) aaGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAGC‑CTTTT‑T‑A‑GCAGCCCGTTTTCTCAGCCCCAGCCCGCAAGAAAATACGGCCGAGTTCTTTTCTCGCCAACTAGCGGCTCTAGCCAAAcct > 7:123947/1‑137 (MQ=255) gCAACCGTTTCATACAAAAAAAGCCCCCCGCTTCTTTTTGGCCGCCACC‑CTTTT‑T‑A‑GCAGCCCGTTTTCTCAGCCCCAGCCCCAAACAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCAt < 3:398258/139‑1 (MQ=255) gCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAGC‑CTTTT‑T‑C‑GCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAACGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCAt < 1:1625/139‑1 (MQ=255) gCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAGC‑CTTTT‑T‑A‑GCAGCCCGTTTTCTCAGCCGCCGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCAt < 8:320780/139‑1 (MQ=255) aaaCTTTTCATATAAAAACATCCCTCCGCTTCTTTTTGCCAGGCACCAT‑TTT‑T‑C‑CCAGCCCTTTTTCACCGCCGCAGCCCGAAACAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGa < 8:345503/139‑1 (MQ=255) aaCGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAGC‑CTTTT‑T‑A‑GCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCGAGACAAACTCATGa > 6:216563/1‑138 (MQ=255) ccttttCATCCAAAAACATCCCGCCGCTTCTTTTTGGCAGGACGC‑C‑TTT‑T‑ACGCACCCCGTTTTCGCAGCCCCACCCCCAAACAAACCACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGAct < 7:197823/136‑1 (MQ=255) aCGTTTCATATAAAAAGATCCCGCCGCTGCTTTTTGGCAGGCAGCGT‑TTT‑T‑A‑GCCGCCCGTTTTCTCAGCCCCAGCCCGCAACAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGAct < 1:266343/139‑1 (MQ=255) aCGTTTCATATAAAAACATCCCTCCGTTTCTTTTTGGCAGGCAGCTT‑TTT‑T‑T‑CCCGCCGGTTTTCTCAGCCGCAGCGCGAAAAAAATGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGAct < 7:282559/139‑1 (MQ=255) aCGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAGC‑CTTTT‑T‑A‑GCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAACGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGAct < 3:202184/139‑1 (MQ=255) aCGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAGC‑CTTTT‑T‑A‑GCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGAct > 3:109979/1‑139 (MQ=255) aCGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAGC‑CTTTT‑T‑A‑GCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGAGTTGTTTTCTCGCCAACTAGCGGCTCTAGCAAAACTCATGAct > 2:90411/1‑139 (MQ=255) cGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAGC‑CTTTT‑T‑A‑GCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGAct > 5:347465/1‑138 (MQ=255) aacaacCCTCCGGTTCTTTTTGGCAGGCAGC‑CTTTT‑T‑A‑GCAGCCCTTTTTCGCCGCCCCCCCCCCAAATAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGATAGACCGt < 8:136224/139‑1 (MQ=255) cGCTTCTTTTTGGCAGGCAGC‑CTTTT‑T‑A‑GCAGCCCGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGATAGACCGTGGAAAGAGaa > 5:398337/1‑139 (MQ=255) cttTTTGGCAGGCCCC‑C‑TTTAT‑A‑CCACCCCGTTTACTAACCCGCCCCCCGCAATAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGATAGACCGTGGAAAGAGAATTCt < 1:23235/138‑1 (MQ=255) ttgcctggccgC‑C‑TTT‑T‑ACGCCGCCGGTTTTCGCCGCCCCACCCCCCAACAAACCACGGCCGATTTCTTTTCTTGCAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGATAGACCGTGGAAAGAGAATTCTTTGt < 3:378708/132‑1 (MQ=255) ttGCCAGGCCGC‑C‑TTT‑TAA‑TCAGCCCGTTTTCTCCGCGTCCCCCCGAAATAACCCACGGCCGATTTCTTTTCTCGAAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGATAGACCGTGGAAAGAGAATTCTTTGt < 4:108444/138‑1 (MQ=255) tgggcagccaGC‑GTTTT‑T‑A‑GCCGCCCGTTTTCTACGCCCCACCCCCCAACAAAACCCGCCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGATAGACCGTGGAAAGAGAATTCTTTGt < 8:345811/136‑1 (MQ=255) ggcaggcaGCAT‑TTT‑T‑A‑GCAGCCCGTTTTATCCGCCGCACCCCGAAATAAAAGACGGCCTATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGATAGACCGTGGAAAGAGAATTCTTTGTca < 4:222290/138‑1 (MQ=255) cccGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGATAGACCGTGGAAAGAGAATTCTTTTTGACAATATGAGTGAAAAAACCaa > 1:435171/1‑138 (MQ=255) cccGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGATAGACCGTGGAAAGAGAATTCTTTGTCACAATATGAGTGAAAAAACCAAc > 7:354598/1‑139 (MQ=255) cccGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGATAGACCGTGGAAAGAGAATTCTTTGTCACAATATGAGTGAAAAAACCAAc > 3:421628/1‑139 (MQ=255) cccGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGATAGACCGTGGAAAGAGAATTCTTTGTCACAATATGAGTGAAAAAACCAAc > 4:120136/1‑139 (MQ=255) cccGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGATAGACCGTGGAAAGAGAATTCTTTGTCACAATATGAGTGAAAAAACCAAc < 6:398337/139‑1 (MQ=255) cccGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACACATGACTCTATGATAGACCGTGGAAAGAGAATTCTTTGTCACAATTAGAGTGAAAAAAGCaa > 4:43658/1‑138 (MQ=255) cccGTTTTCTCAGCCGCAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCGCTAGCAAAACTCATGACTCTATGATAGACCGTGGAAAGAGAATTGTTTGTAAAGATATTTGTGAAAAAACCAAc > 7:165177/1‑139 (MQ=255) cAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGATTGAACGTGGAAAGAGAATTCATTTTCACAAAATGAGTGAAAAAACCAACTAGTTTTTAGAAGttt > 8:54516/1‑139 (MQ=255) cAGCCCGCAAGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGATAGACCGTGGAAAGAGAATTCTTTGTCACAATATGAGTGAAAAAACCAACTAGTTTTTATAAGttt > 2:178638/1‑139 (MQ=255) || CGTCACCCAGTTCATCAAAAAGACCATCCACACCCGTAAAGATACAAGCAAACGTTTCATAGAAAAACATCCCTCCGCTTCTTTTTGGCAGGCAGC‑C‑TTT‑T‑A‑GCAGCCCGTTTTCTCAGCCGCAGCCCACGGGAAAAGACGGCCGATTTCTTTTCTCGCAAACTAGCGGCTCTAGCAAAACTCATGACTCTATGATAGACCGTGGAAAGAGAATTCTTTGTCACAATATGAGTGAAAAAACCAACTAGTTTTTAGAAGTTT > CP006881/3725109‑3725369 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |