BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP006881	2,195,448	+T	intergenic (‑167/+49)	U712_10995 ← / ← U712_11000	Anthranilate synthase component 1/Chorismate mutase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP006881	2,195,448	1	.	T	100.0%	285.9 / NA	94	intergenic (‑167/+49)	U712_10995/U712_11000	Anthranilate synthase component 1/Chorismate mutase
Reads supporting (aligned to +/- strand): ref base . (0/0); new base T (43/51); total (43/51)

Only 100 of 108 total aligned reads displayed.

GAAGATGGCATGAGAGGATAAAACATTATATAACAAATAAACCCAAAAGAAAGGCTTCTTTTGGGTAGAATAAACATACATGTCTCAGCTCAACTACACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTC‑AATCGCTTTATACACACTCTTGTGTATTTCTAAGCTGTTCCTATCGTATTACAATTCAGTATTTTTTGTCAATGATAAATCGGGTCTTAATACAACGGCTTTTTCTAAATATACATGCCTGATCCGTTCCT  >  CP006881/2195312‑2195579

gaagaTGGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTctaa                                                                                                                                   <  5:72024/139‑4 (MQ=255)

gaagaTGGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTctaa                                                                                                                                   <  5:176486/139‑4 (MQ=255)

gaagaTGGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTctaa                                                                                                                                   <  8:261565/139‑4 (MQ=255)

 aagaTGGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTctaa                                                                                                                                   <  5:441428/138‑4 (MQ=255)

     tGGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTctaa                                                                                                                                   <  7:202075/134‑4 (MQ=255)

     tGGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTctaa                                                                                                                                   >  8:202075/1‑131 (MQ=255)

      ggCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTctaa                                                                                                                                   <  1:328918/133‑4 (MQ=255)

      ggCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTctaa                                                                                                                                   >  2:328918/1‑130 (MQ=255)

         aTGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTta                                                                                                                           >  2:246289/1‑138 (MQ=255)

             gagGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATaca                                                                                                                       <  1:399019/138‑1 (MQ=255)

              agGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTctaa                                                                                                                                   <  1:100376/125‑4 (MQ=255)

              agGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTctaa                                                                                                                                   >  2:100376/1‑122 (MQ=255)

              agGATAAAATACTATAAAACAAATAAACCCAAAAGAAAGACTTCTTTAGGGTAGAATAAACATA‑ATGTCTCAGCGCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCGTTATacaca                                                                                                                     <  4:248155/139‑1 (MQ=255)

               ggATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATacacac                                                                                                                    <  1:246289/139‑1 (MQ=255)

                gATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCACCTCATTCTAATTGCTTTATACACAct                                                                                                                   >  3:138914/1‑139 (MQ=255)

                gATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATacacac                                                                                                                    >  3:132672/1‑138 (MQ=255)

                gATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACAct                                                                                                                   >  5:11845/1‑139 (MQ=255)

                    aaatactatataACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCtt                                                                                                                <  4:92375/132‑1 (MQ=255)

                      atactatataACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTtgtg                                                                                                             <  4:152505/135‑1 (MQ=255)

                      atactatataACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTtgtg                                                                                                             <  8:280871/135‑1 (MQ=255)

                      atactatataACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑AAGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTtgtg                                                                                                             <  8:159832/135‑1 (MQ=255)

                        actatataACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTa                                                                                                           >  5:297027/3‑139 (MQ=255)

                          tatataACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTAtt                                                                                                         >  2:114013/1‑139 (MQ=255)

                          tatataACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTAtt                                                                                                         >  6:4062/1‑139 (MQ=255)

                          tatataACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTAtt                                                                                                         >  4:138686/1‑139 (MQ=255)

                           atataACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTctaa                                                                                                                                   <  4:254822/112‑4 (MQ=255)

                           atataACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTctaa                                                                                                                                   >  3:254822/1‑109 (MQ=255)

                           atataACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTctaa                                                                                                                                   >  1:229372/1‑109 (MQ=255)

                           atataACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTctaa                                                                                                                                   <  2:229372/112‑4 (MQ=255)

                           atataACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTATCTGCTACCCTATACTCTAACTCAACTCATTCTAATTGCTTTATAAACACTCTTGTGTAttt                                                                                                        >  5:64691/1‑139 (MQ=255)

                            tataACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTc                                                                                                       >  1:40013/1‑139 (MQ=255)

                                aCAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAg                                                                                                   <  3:218396/139‑1 (MQ=255)

                                aCAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAg                                                                                                   <  7:76478/139‑1 (MQ=255)

                                aCAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAg                                                                                                   <  4:138914/139‑1 (MQ=255)

                                aCAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAg                                                                                                   <  4:132672/139‑1 (MQ=255)

                                aCAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACAT‑‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAg                                                                                                   <  4:326493/138‑1 (MQ=255)

                                 cAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGc                                                                                                  >  6:84797/1‑139 (MQ=255)

                                 cAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGc                                                                                                  <  4:390620/139‑1 (MQ=255)

                                 cAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGc                                                                                                  >  3:390620/1‑139 (MQ=255)

                                 cAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGACTCAGCTCAACTAAACTCATTATCTGCTACACTATTAACTAACTCAACTCATTCTAAATGCTTTATACAAACACTTGTGTATTTCt                                                                                                      >  8:138975/1‑135 (MQ=255)

                                    aTAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATacaca                                                                                                                     >  1:411038/1‑117 (MQ=255)

                                    aTAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATacaca                                                                                                                     <  2:411038/117‑1 (MQ=255)

                                    aTAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATaca                                                                                                                       <  8:407870/115‑1 (MQ=255)

                                    aTAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATaca                                                                                                                       >  8:206236/1‑115 (MQ=255)

                                    aTAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATaca                                                                                                                       <  7:206236/115‑1 (MQ=255)

                                    aTAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATaca                                                                                                                       >  7:407870/1‑115 (MQ=255)

                                    aTAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTtgtg                                                                                                             <  8:284597/125‑1 (MQ=255)

                                    aTAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTtgtg                                                                                                             >  7:284597/1‑125 (MQ=255)

                                    aTAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAg                                                                                                   <  8:303939/135‑1 (MQ=255)

                                    aTAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAg                                                                                                   >  7:303939/1‑135 (MQ=255)

                                    aTAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGCTGt                                                                                               >  6:93944/1‑139 (MQ=255)

                                    aTAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGCTGt                                                                                               >  4:2379/1‑139 (MQ=255)

                                      aaaCCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACActc                                                                                                                  <  1:70509/118‑1 (MQ=255)

                                          ccAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGCTGTTCTTAt                                                                                         <  4:415678/139‑1 (MQ=255)

                                            aaaaGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGCTGTTCTTATCg                                                                                       <  7:9630/139‑1 (MQ=255)

                                            aaaaGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGCTGTTCTTATCg                                                                                       <  3:321244/139‑1 (MQ=255)

                                            aaaaGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGCTGTTCTTATCg                                                                                       <  3:213210/139‑1 (MQ=255)

                                              aagaaagaCTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGCTGTTCTTATCGTa                                                                                     >  6:151440/1‑139 (MQ=255)

                                                 aaagACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGCTGTTCTTATCGTATTa                                                                                  <  6:369960/139‑1 (MQ=255)

                                                    gacttcttTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGCTGTTCTTATCGTATTACaa                                                                               >  6:33664/3‑139 (MQ=255)

                                                    gacttcttTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGCTGTTCTTATCGTATTACaa                                                                               <  2:40013/137‑1 (MQ=255)

                                                    gacttcttTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTATAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTATAAGATGTTCTTATCGTATTACa                                                                                >  6:27681/3‑138 (MQ=255)

                                                                    aaTAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGCTGTTCTTATCGTATTACAATTCAGTATTTTTTGt                                                                >  8:216423/1‑138 (MQ=255)

                                                                          acataatGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGCTGTTCTTATCGTATTACAATTCAGTATTTTTTGTCAATGa                                                          <  2:432160/134‑1 (MQ=255)

                                                                            ataatGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGCTGTTCTTATAGTATTACAATTCAGTATTTTTTGTCAATGAt                                                         >  6:346066/4‑138 (MQ=255)

                                                                               atGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGCTGTTCTTATCGTATTACAATTCAGTATTTTTTGTCAATGATAAAt                                                     >  3:237381/1‑139 (MQ=255)

                                                                               atGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGCTGTTCTTATCGTATTACAATTCAGTATTTTTTGTCAATGATAAAt                                                     >  2:317271/1‑139 (MQ=255)

                                                                               atGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGCTGTTCTTATCGTATTACAATTCAGTATTTTTTGTCAATGATAAAt                                                     <  7:216423/139‑1 (MQ=255)

                                                                                    tcAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTaa                                                                                                    >  6:4044/1‑87 (MQ=255)

                                                                                    tcAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGCTGTTCTTATCGTATTACAATTCAGTATTTTTTGTCAATGATAAATCgggc                                                >  3:12029/1‑138 (MQ=255)

                                                                                      aGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGCTGTTCTTATCGTATTACAATTCAGTATTTTTTGTCAATGATAAATCgggcc                                               >  2:365273/1‑136 (MQ=255)

                                                                                      aGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGCTGTTCTTATCGTATTACAATTCAGTATTTTTTGTCAATGATAAATCgggc                                                <  5:151440/137‑2 (MQ=255)

                                                                                           aaCTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCAATCTAATTGCTTTATACACACTCATGTGTATTTCTAAGATGTTCTTATAGTATTACAATTCAGTATTTTTTGTCAATTATAAATCGGGACTCAATa                                         >  2:304816/1‑139 (MQ=255)

                                                                                                  cTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGCTGTTCTTATCGTATTACAATTCAGTATTTTTTGTCAATGATAAATCGGGCCTCAATACGAcaac                                  <  5:93944/139‑4 (MQ=255)

                                                                                                       tctcTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGCTGTTCTTATCGTATTACAATTCATTATTTTTTGTAAATGATAAATCGGGCCTCAATACGACAACtttt                              <  2:328500/138‑1 (MQ=255)

                                                                                                       tctcTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGCTGTTCTTATCGTATTACAATTCAGTATTTTTTGTCAATGATAAATCGGGCCTCAATACGACAACtttt                              >  8:331903/1‑138 (MQ=255)

                                                                                                        ctctGCTTCCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGCTGTTCTTATCGTATTACAATTCAGTATTTTTTGTCAATGATAAATCGGGCCTCAATACGACAACttttt                             <  3:76181/138‑1 (MQ=255)

                                                                                                        ctctGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGCTGTTCTTATCGTATTACAATACAGTATTTTTTGTCAATGATAAATCGGGCCTCAATACGACAACttttt                             <  6:11845/138‑1 (MQ=255)

                                                                                                          ctGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGCTGTTCTTATCGTATTACAATTCAGTATTTTTTGTCAATGATAAATCGGGCCTCAATACGACAACTTTTTCt                           >  3:77178/1‑138 (MQ=255)

                                                                                                           tGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGCTGTTCTTATCGTATTACAATTCAGTATTTTTTGTCAATGATAAATCGGGCCTCAATACGACAACTTTTTCt                           <  3:138686/137‑1 (MQ=255)

                                                                                                                cccTATTCTCTATCTCAACTCATTCTAATTGCTTTATACAGACTCTTGTGTTTTTCTAAGCTGTTCTTATCGTATTACAATTCAGTATTTTTTGTCAATGATAAATCGGGCCTCAATACGTCAACTTTTTCTAAAtata                    <  7:138975/139‑1 (MQ=255)

                                                                                                                cccTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGCTGTTCTTATCGTATTACAATTCAGTATTTTTTGTCAATGATAAATCGGGCCTCAATACGACAACTTTTTCTAAata                      <  1:114013/137‑1 (MQ=255)

                                                                                                                cccTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGCTGTTCTTATCGTATTACAATTCAGTATTTTTTGTCAATGATAAATCGGGCCTCAATACGACAACTTTTTCTAAAtata                    <  3:2379/139‑1 (MQ=255)

                                                                                                                   tATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGCTGTTCTTATCGTATTACAATTCAGTATTTTTTGTCAATGATAAATCGGGCCTCAATACGACAACTTTTTCTAAATATACAt                 >  4:186780/1‑139 (MQ=255)

                                                                                                                     ttCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGCTGTTCTTATCGTATTACAATTCAGTATTTTTTGTCAATGATAAATCGGGCCTCAATACGACAACttttt                             >  6:343776/1‑125 (MQ=255)

                                                                                                                     ttCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGCTGTTCTTATCGTATTACAATTCAGTATTTTTTGTCAATGATAAATCGGGCCTCAATACGACAACttttt                             <  5:343776/125‑1 (MQ=255)

                                                                                                                     ttCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGCTGTTCTTATCGTATTACAATTCAGTATTTTTTGTCAATGATAAATCGGGCCTCAATACGACAACTTTTTCTAAATATACATgt               <  6:179258/139‑2 (MQ=255)

                                                                                                                     ttCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGCTGTTCTTATCGTATTACAATTCAGTATTTTTTGTCAATGATAAATCGGGCCTCAATACGACAACTTTTTCTAAATATACATgt               >  4:421109/1‑138 (MQ=255)

                                                                                                                          tAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGCTGTTCTTATCGTATTACAATTCAGTATTTTTTGt                                                                <  1:270543/85‑1 (MQ=255)

                                                                                                                          tAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGCTGTTCTTATCGTATTACAATTCAGTATTTTTTGt                                                                >  2:270543/1‑85 (MQ=255)

                                                                                                                          tAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGCTGTTCTTATCGTATTACAATTCAGTATTTTTTGTCAATGATAAATCGGGCCTCAATACGACAACTTTTTCTAAATATACATGTCTGa           >  4:189118/1‑138 (MQ=255)

                                                                                                                          tAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGCTGTTCTTATCGTATTACAATTCAGTATTTTTTGTCAATGATAAATCGGGCCTCAATACGACAACTTTTTCTAAATATACATGTCTGAt          <  4:77178/139‑1 (MQ=255)

                                                                                                                           aactcaactcATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAATCTGTTCTTATCGTATTACAATTCAGTATTTTTTGTCAATGATAAATCGGGCCTCAATACGACAACTTTTTCTAAATATACATGTCTGATc         <  6:78315/139‑1 (MQ=255)

                                                                                                                            actcaactcaTTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGCTGTTCTTATCGTATTACAATTCAGTATTTTTTGTCAATGATAAATCGGGCCTCAATACGACAACTTTTTCTAAATATACATGTCTGAt          <  3:421109/137‑1 (MQ=255)

                                                                                                                            actcaactcaTTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGCTGTTCTTATCGTATTACAATTCAGTATTTTTTGTCAATGATAAATCGGGCCTCAATACGACAACTTTTTCTAAATATACATGTCTGATct        <  5:309283/139‑2 (MQ=255)

                                                                                                                            actcaactcaTTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGCTGTTCTTATCGTATTACAATTCAGTATTTTTTGTCAATGATAAATCGGGCCTCAATACGACAACTTTTTCTAAATATACAAGTCTGAt          <  4:237381/137‑1 (MQ=255)

                                                                                                                             ctcaactcaTTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGCTGTTCTTATCGTATTACAATTCAGTATTTTTTGTCAATGATAAATCGGGCCTCAATACGACAACTTTTTCTAAATATACATGTCTGATct        >  4:325250/1‑137 (MQ=255)

                                                                                                                                  ctcaTTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGCTGTTCTTATCGTATTACAATTCAGTATTTTTTGTCAATGATAAATCg                                                   <  2:289381/90‑1 (MQ=255)

                                                                                                                                  ctcaTTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGCTGTTCTTATCGTATTACAATTCAGTATTTTTTGTCAATGATAAATCg                                                   >  1:289381/1‑90 (MQ=255)

                                                                                                                                  ctcaTTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGCTGTTCTTATCGTATTACAATTCAGTATTTTTTGTCAATGATAAATCGGGCCTCAATACGACAACTTTTTCTAAATATACATGTCTGATCTGATCCt  >  3:359204/1‑139 (MQ=255)

GAAGATGGCATGAGAGGATAAAACATTATATAACAAATAAACCCAAAAGAAAGGCTTCTTTTGGGTAGAATAAACATACATGTCTCAGCTCAACTACACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTC‑AATCGCTTTATACACACTCTTGTGTATTTCTAAGCTGTTCCTATCGTATTACAATTCAGTATTTTTTGTCAATGATAAATCGGGTCTTAATACAACGGCTTTTTCTAAATATACATGCCTGATCCGTTCCT  >  CP006881/2195312‑2195579

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`