| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP006881 | 596,270 | T→C | L155L (TTA→CTA) | U712_02945 → | Mannan endo‑1,4‑beta‑mannosidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 596,270 | 0 | T | C | 98.9% | 298.5 / NA | 92 | L155L (TTA→CTA) | U712_02945 | Mannan endo‑1,4‑beta‑mannosidase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (33/58); minor base A (1/0); total (34/58) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.70e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TGTAAGCTGCAACGGCGATTTAATGTCGTATTGGAAAAATGGCGGAATTCCGCAAATCAGTTTGCACCTGGCGAACCCTGCTTTTCAGTCAGGGCATTTTAAAACACCGATTACAAATGATCAGTATAAAAACATATTAGATTCAGCAACAGCGGAAGGGAAGCGGCTAAATGCCATGCTCAGCAAAATTGCTGACGGACTTCAAGAGTTGGAGAACCAAGGTGTGCCTGTTCTGTTCAGGCCGCTGCATGAAATGAACGGCGAATGGTT > CP006881/596134‑596403 | tGTAAGCTGCAACGGCGATTTAATGTCGTATTGGAAAAATGGCGGAATTCCGCAAATCAGTTTGCACCTGGCGAACCCTGCTTTTCAGTCAGGGCATTTTAAAACACCGATTACAAATGATCAGTATAAAAAAATACTa < 5:210535/139‑1 (MQ=255)tGTAAGCTGCAACGGCGATTTAATGTCGTATTGGAAAAATGGCGGAATTCCGCAAATCAGTTTGCACCTGGCGAACCCTGCTTTTCAGTCAGGGCATTTTAAAACACCGATTACAAATGATCAGTATAAAAAAATACTa < 7:368908/139‑1 (MQ=255) tAAGCTGCAACGGCGATTTAATGTCGTATTGGAAATATGGCGGAATTCCGCAAATCAGTTTGCACCTGGCGAACCCTGCTTTTCAGTCAGGGCATTTTAAAACACCGATTACAAATGATCAGTATAAAAAAATACTAGa < 3:426594/139‑1 (MQ=255) tAAGCTGCAACGGCGATTTAATGTCGTATTGGAAAAATGGCGGAATTCCGCAAATCAGTTTGCACCTGGCGAACCCTGCTTTTCAGTCAGGGCATTTTAAAACACCGATTACAAATGATCAGTATAAAAAAATACTAGa < 4:348059/139‑1 (MQ=255) aGCTGCAACGGCGATTTAATGTCGTATTGGAAAAATGGCGGAATTCCGCAAATCAGTTTGCACCTGGCGAACCCTGCTTTTCAGTCAGGGCATTTTAAAACACCGATTACAAATGATCAGTATAAAAAAATACTAGAtt > 7:72026/1‑139 (MQ=255) aGCTGCAACGGCGATTTAATGTCGTATTGGAAAAATGGCGGAATTCCGCAAATCAGTTTGCACCTGGCGAACCCTGCTTTTCAGTCAGGGCATTTTAAAACACCGATTACAAATGATCAGTATAAAAAAATACTAGAtt > 3:180479/1‑139 (MQ=255) aGCTGCAACGGCGATTTAATGTCGTATTGGAAAAATGGCGGAATTCCGCAAATCAGTTTGCACCTGGCGAACCCTGATTTTCAGTCAGGGCATTTTAAAACACCGATTACAAAAGATCAGTATAAAAAAATACTAGAt > 1:409144/1‑138 (MQ=255) aGCTGCAACGGCGATTCAATGTCGTATTGGAAAAATGGCGGAATTCCGCAAATCAGTTTGCACCTGGCGAACCCTGCTTTTCAGTCAGGTCATTTTAAAACACCGATTACAAATGATCAGTATAAAAAAATACTAGAt > 8:329176/1‑138 (MQ=255) gCTGCAACGGCGATTTAATGTCGTATTGGAAAAATGGCGGAATTCCGCAAATCAGTTTGCACCTGGCGAACCCTGCTTTTCAGTCAGGGCATTTTAAAACACCGATTACAAATGATCAGTATAAAAAAATACTAGATTc < 2:347701/139‑1 (MQ=255) cAACGGCGATTTAATGTCGTATTGGAAAAATGGCGGAATTCCGCAAATCAGTTTGCACCTGGCGAACCCTGCTTTTCAGTCAGGGCATTTTAAAACACCGATTACAAATGATCAGTATAAAAAAATACTAGATTcttc > 6:261265/1‑135 (MQ=255) cAACGGCGATTTAATGTCGTATTGGAAAAATGGCGGAATTCCGCAAATCAGTTTGCACCTGGCGAACCCTGCTTTTCAGTCAGGGCATTTTAAAACACCGATTACAAATGATCAGTATAAAAAAATACTAGATTctta > 4:396368/1‑135 (MQ=255) cAACGGCGATTTAAAGTCGTATTGGAAAAATGGCGGAATTCCGCAAATCAGTTTGCACCTGGCGAACCCTGCTTTTCAGTCAGGGCATTTTAAAACACCGATTACAAATGATCAGTATAAAAAAATACTAGATTcttc < 2:130535/138‑4 (MQ=255) aaCGGCGATTTAATGTCGTATTGGAAAAATGGCGGAATTCCGCAAATCAGTTTGCACCTGGCGAACCCTGCTTTTCAGTCAGGGCATTTTAAAACACCGATTACAAATGATCAGTATAAAAAAATACTAGATTcttcaa < 1:404602/139‑6 (MQ=255) aaCGGCGATTTAATGTCGTATTGGAAAAATGGCGGAATTCCGCAAATCAGTTTGCACCTGGCGAACCCTGCTTTTCAGTCAGGGCATTTTAAAACACCGATTACAAATGATCAGTATAAAAAAATACTAGATTcttcaa < 4:146078/139‑6 (MQ=255) aaCGGCGATTTAATGTCGTATTGGAAAAATGGCGGAATTCCGCAAATCAGTTTGCACCTGGCGAACCCTGCTTTTCAGTCAGGGCATTTTAAAACACCGATTACAAATGATCAGTATAAAAAAATACTAGATTcttcaa > 5:140675/1‑134 (MQ=255) aaCGGCGATTTAATGTCGTATTGGAAAAATGGCGGAATTCCGCAAATCAGTTTGCACCTGGCGAACCCTGCTTTTCAGTCAGGGCATTTTAAAACACCGATTACAAATGATCAGTATAAAAAAATACTAGATTcttcaa < 8:200124/139‑6 (MQ=255) cGGCGATTTAATGTCGTATTGGAAAAATGGCGGAATTCCGCAAATCAGTTTGCACCTGGCGAACCCTGCTTTTCAGTCAGGGCATTTTAAAACACCGATTACAAATGATCAGTATAAAAAAATACTAGATTcttcaa > 6:235919/1‑132 (MQ=255) ggCGATTTAATGTCGTATTGGAAAAATGTAGGAATTCCGCAAATCAGTTTGCACCTGTCGAACCCTGCTTTTCAGTCAGGGCATTTTAAAACACCGATTACAAATGATCAGTATAAAAAAATACTAGATTCTTCAACAg < 8:154924/139‑1 (MQ=255) ggCGATTTAATGTCGTATTGGAAAAATGGCGGAATTCCGCAAATCAGTTTGCACCTGGCGAACCCTGCTTTTCAGTCAGGGCATTTTAAAACACCGATTACAAATGATCAGTATAAAAAAATACTAGATTCTTCAACAg < 8:72026/139‑1 (MQ=255) aTTTAATGTCGTATTGGAAAAATGGCGGAATTCCGCAAATCAGTTTGCACCTGGCGAACCCTGCTTTTCAGTCAGGGCATTTTAAAACACCGATTACAAATGATCAGTATAAAAAAATACTAGATTCTTCAACAgtag > 5:319453/1‑135 (MQ=255) tCGTATTGGAAAAATGGCGGAATTCCGCAAATCAGTTTGCACCTGGCGAACCCTGCTTTTCAGTCAGGGCATTTTAAAACACCGATTACAAATGATCAGTATAAAAAAATACTAGATTCTTCAACAGTagaaggaaag < 3:380251/138‑1 (MQ=255) gTATTGGAAAAATGGCGGAATTCCGCAAATCAGTTTGCACCTGGCGAACCCTGCTTTTCAGTCAGGGCATTTTAAAACACCGATTACAAATGATCAGTATAAAAAAATCCTAGATTCTTCAACAGTAGAAGGAAAGCgg < 5:128903/139‑1 (MQ=255) tATTGGAAAAATGGCGGAATTCCGCAAATCAGTTTGCACCTGGCGAACCCTGCTTTTCAGTCAGGGCATTTTAAAACACCGATTACAAATGATCAGTATAAAAAAATACTAGATTCTTCAACAGTAGAAGGAAAGCGGc > 5:254923/1‑139 (MQ=255) tATTGGAAAAATGGCGGAATTCCGCAAATCAGTTTGCACCTGGCGAACCCTGCTTTTCAGTCAGGGCATTTTAAAACACCGATTACAAATGATCAGTATAAAAAAATACTAGATTCTTCAACAGTAGAAGGAAAGCGGc > 3:435242/1‑139 (MQ=255) tttgAAAAATGGCGGAATTCCGCAAATCAGTTTGCACCTGGCGAACCATGCTTTTCAGTCAGGGCATTTTAAAACACCGATTACAAATGATCAGTATAAAAAAATACTAGATTCTTCAACAGTAGAAGGAAAGCGGCt < 2:283936/135‑1 (MQ=255) ttGGAAAAATGGCGGAATTCCGCAAATCAGTTTGCACCTGGCGAACCCTGCTTTTCAGTCAGGGCATTTTAAAACACCGATTACAAATGATCAGTATAAAAAAATACTAGATTCTTCAACAGTAGAAGGAAAGCGGCt < 7:260785/138‑1 (MQ=255) ttGGAAAAATGGCGGAATTCCGCAAATCAGTTTGCACCTGGCGAACCCTGCTTTTCAGTCAGGGCATTTTAAAACACCGATTACAAATGATCAGTATAAAAAAATACTAGATTCTTCAACAGTAGAAGGAAAGCGGCt < 1:246223/138‑1 (MQ=255) ttGGAAAAATGGCGGAATTCCGCAAATCAGTTTGCACCTGGCGAACCCTGCTTTTCAGTCAGGGCATTTTAAAACACCGATTACAAATGATCAGTATAAAAAAATACTAGATTCTTCAACAGTAGAAGGAAAGCGGCt < 6:319453/138‑1 (MQ=255) ttGGAAAAATGGCGGAATTCCGCAAATCAGTTTGCACCTGGCGAACCCTGCTTTTCAGTCAGGGCATTTTAAAACACCGATTACAAATGATCAGTATAAAAAAATACTAGATTCTTCAACAGTAGAAGGAAAGCGGCt < 4:12572/138‑1 (MQ=255) ttGGAAAAATGGCGGAAATCCGCAAATCAGTTTGCACCTGGCGAACCCTGCTTTTCAGTCAGGGCATTTTAAAACACCGATTACAAATGATCAGTATAAAAAAATACTAGATTCTTCAACAGTAGAAGGAAAGCGGCt < 4:399801/138‑1 (MQ=255) gAAAAATGGCGGAATTCCGCAAATCAGTTTGCACCTGGCGAACCCTGCTTTTCAGTCAGGGCATTTTAAAACACCGATTACAAATGATCAGTATAAAAAAATACTAGATTCTTCAACAGTAGAAGGAAAGCGGCTAAAt > 6:238673/1‑139 (MQ=255) aaaaTGGCGGAATTACGCAAATCAGTTTGCACCTGGCGAACCCTGCTTTTCAGTCAGGGCATTTTAAAACACCGATTACAAATGATCAGTATAAAAAAATAATAGATTCTTCAACAGTAGAAGGAAAGCGGCTAAATGc > 2:102924/1‑139 (MQ=255) aaaTGGCGGAATTCCGCAAATCAGTTTGCACCTGGCGAACCCTTCTTTTCAGTCAGGGCATTTTAAAACACCGATTACAAATGATCAGTATAAAAAAATACTATATTCTTCAACAGTAGAAGGAAAGCGGCTAAATGcc < 7:329176/139‑1 (MQ=255) aaaTGGCGGAATTCCGCAAATCAGTTTGCACCTGGCGAACCCTGCTTTTCAGTCAGGGCATTTTAAAACACCGATTACAAATGATCAGTATAAAAAAATACTAGATTCTTCAACAGTAGAAGGAAAGCGGCTAAATGcc < 1:428697/139‑1 (MQ=255) aaaTGGCGGAATTCCGCAAATCAGTTTGCACCTGGCGAACCCTGCTTTTCAGTCAGGGCATTTTAAAACACCGATTACAAATGATCAGTATAAAAAAATACTAGATTCTTCAACAGTAGAAGGAAAGCGGCTAAATGcc < 1:140776/139‑1 (MQ=255) aTGGCGGAATTCCGCAAATCAGTTTGCACCTGGCGAACCCTGCTTTTCAGTCAGGGCATTTTAAAACACCGATTACAAATGATCAGTATAAAAAAATACTAGATTCTTCAACAGTAGAAGGAAAGCGGCTAAATGCCAt > 8:420035/1‑139 (MQ=255) tGGCGGAATTCCGCAAATCAGTTTGCACCTGGCGAACCCTGCTTTTCAGTCAGGGCATTTTAAAACACCGATTACAAATGATCAGTATAAAAAAATACTAGATTCTTCAACAGTAGAAGGAAAGCGGCTAAATGCCATg < 7:420035/139‑1 (MQ=255) ggCGGAATTCCGCAAATCAGTTTGCACCTGGCGAACCCTGCTTTTCAGTCAGGGCATTTTAAAACACCGATTACAAATGATCAGTATAAAAAAATACTAGATTCTTCATCAGTAGAAGGAAAGCGGATAAATGCCATGc > 5:9187/1‑139 (MQ=255) aTTCCGCAAATCAGTTTGCACCTGGCGAACCCTGCTTATCAGTCAGGGCATTTTAAAACACCGATTACAAATGATCAGTATAAAAAAATACTAGATTCTTCAACAGTAGAAGGAAAGCGGCTAAATGCCATGCTCAGCa < 5:423517/139‑1 (MQ=255) atCCGCAAATCAGTTTGCACCTGGCGAACCCTGCTTTTCAGTCAGGGCATTTTAAAACACCGATTACAAATGATCAGTATAAAAAAATACTAGATACTTCAACAGTAGAAGGAAAGCGGCTAAATGCCATGCTCAGCa > 1:222473/2‑138 (MQ=255) tCAGTTTGCACCTGGCGAACCCTGCTTTTCAGTCAGGGCATTTTAAAACACCGATTACAAATGATCAGTATAAAAAAATACTAGATTCTTCAACAGTAGAAGGAAAGCGGCTAAATGCCATGCTCAGCAAAATTGCTGa < 7:282603/139‑1 (MQ=255) aGTTTTCACCTGGCGAACACTGCTTTTCAGTCAGGGCATTTTAAAACACCGATTACAAATGATCAGTATTAAAAAATACTAGATTCTTCAACTGTAGAAGGAAAGCGGCTAAATGCCATGCTCAGCAAAATTGCTGACg < 2:409144/139‑1 (MQ=255) aGTTTGCACCTGGCGAACCCTGCTTTTCAGTCAGGGCATTTTAAAACACCGATTACAAATGATCAGTATAAAAAAATACTAGATTCTTCAACAGTAGAAGGAAAGCGGCTAAATGCCATGCTCAGCAAAATTGCTGACg < 4:360989/139‑1 (MQ=255) ggCGAACCCTGCTTTTCAGTCAGGGCATTTTAAAACACCGATTACAAATGATCAGTATAAAAAAATACTAGATTCTTCAACAGTAGAAGGAAAGCGGCTAAATGCCATGCTCAGCAAAATTGCTGACGGACTTCAagag > 1:206664/1‑139 (MQ=255) gCGAACCCTGCTTTTCAGTCAGGGCATTTTAAAACACCGATTACAAATGATCAGTATAAAAAAATACTAGATTCTTCAACAGTAGAAGGAAAGCg > 1:101488/1‑95 (MQ=255) gCGAACCCTGCTTTTCAGTCAGGGCATTTTAAAACACCGATTACAAATGATCAGTATAAAAAAATACTAGATTCTTCAACAGTAGAAGGAAAGCg < 2:101488/95‑1 (MQ=255) gCGAACCCTGCTTTTCAGTCAGGGCATTTTAAAACACCGATTACAAATGATCAGTATAAAAAAATACTAGATTCTTCAACAGTAGAAGGAAAGCGGCTAAATg > 3:71154/1‑103 (MQ=255) gCGAACCCTGCTTTTCAGTCAGGGCATTTTAAAACACCGATTACAAATGATCAGTATAAAAAAATACTAGATTCTTCAACAGTAGAAGGAAAGCGGCTAAATg < 4:71154/103‑1 (MQ=255) gCGAACCCTGCTTTTCAGTCAGGGCATTTTAAAACACCGATTACAAATGATCAGTATAAAAAAATACTAGATTCTTCAACAGTAGAAGGAAAGCGGCTAAATGCCATGCTCAGCAAAATTGCTGACGGACTTCAAGAGt > 7:410700/1‑139 (MQ=255) gCGAACCCTGCTTTTCAGTCAGGGCATTTTAAAACACCGATTACAAATGATCAGTATAAAAAAATACTAGATTCTTCAACAGTAGAAGGAAAGCGGCTAAATGCCATGCTCAGCAAAATTGCTGACGGACTTCAAGAGt > 5:2488/1‑139 (MQ=255) gAACCCTGCTTTTCAGTCAGGGCATTTTAAAACACCGATTACAAATGATCAGTATAAAAAAATACTAGATTCTTCAACAGTAGAAGGAAAGCGGCTAAATGCCATGCTCAGCAAAATTGCTGACGGACTTCAAGAGTTg < 5:186562/139‑1 (MQ=255) aCCCTGCTTTTCAGTCAGGGCATTTTAAAACACCGATTACAAATGATCAGTATAAAAAAATACTAGATTCTTCAACAGTAGAAGGAAAGCGGCTAAATGCCATGCTCAGCAAAATTGCTGACGGACTTCAAGAGTTGga < 8:89729/139‑1 (MQ=255) aCCCTGCTTTTCAGTCAGGGCATTTTAAAACACCGATTACAAATGATCAGTATAAAAAAATACTAGATTCTTCAACAGTAGAAGGAAAGCGGCTAAATGCCATGCTCAGCAAAATTGCTGACGGACTTCAAGAGTTGga < 2:206664/139‑1 (MQ=255) tcagtcagGGCATTTTAAAACACCGATTACAAATGATCAGTATAAAAAAATACTAGATTCTTCAACAGTAGAAGGAAAGCGGCTAAATGCCATGCTCAGCAAAATTGCTGACGGACTTCAAGAGTTGGAGAACCAAgg < 4:435242/138‑1 (MQ=255) tcagtcagGGCATTTTAAAACACCGATTACAAATGATCAGTATAAAAAAATACTAGATTCTTCAACAGTAGAAGGAAAGCGGCTAAATGCCATGCTCAGCAAAATTGCTGACGGACTTCAAGAGTTGGAGAACCAAgg < 7:400688/138‑1 (MQ=255) tcagtcagGGCATTTTAAAACACCGATTACAAATGATCAGTATAAAAAAATACTAGATTCTTCAACAGTAGAAGGAAAGCGGCTAAATGCCATGCTCAGCAAAATTGCTGACGGACTTCAAGAGTTGGAGAACCAAgg < 3:251318/138‑1 (MQ=255) tcagGGCATTTTAAAACACCTATTACAAATGATCAGTATAAAAAAATACTAGATTCTTCAACAGTAGAAGGAAAGCGGCTAAATGCCATGCTCAGCAAAATTGCTGACGGACTTCAAGAGTTGGAGAACCAAGGTGTGc < 3:99873/139‑1 (MQ=255) tcagGGCATTTTAAAACACCTATTACAAATGATAATTATAAAAAAATACTAGATTCTTCAACAGTAGAAGGAAAGCGGCTAAATGCCATGCTCAGCAAAATTGCTGACGGACTTCAAGAGTTGGAGAACCAAGGTGTGc < 7:9033/139‑1 (MQ=255) tcagGGCATTTTAAAACACCGATTACAAATGATCAGTATAAAAAAATACTAGATTCTTCAACAGTAGAAGGAAAGCGGCTAAATGCCATGCTCAGCAAAATTGCTGACGGACTTCAAGAGTTGGAGAACCAAGGTGTGc < 2:428846/139‑1 (MQ=255) tcagGGCATTTTAAAACACCGATTACAAATGATCAGTATAAAAAAATACTAGATTCTTCAACAGTAGAAGGAAAGCGGCTAAATGCCATGCTCAGCAAAATTGCTGACGGACTTCAAGAGTTGGAGAACCAAGGTGTGc < 2:40980/139‑1 (MQ=255) tcagGGCATTTTAAAACACCGATTACAAATGATCAGTATAAAAAAATACTAGATTCTTCAACAGTAGAAGGAAAGCGGCTAAATGCCATGCTCAGCAAAATTGCTGACGGACTTCAAGAGTTGGAGAACCAAGGTGTGc > 7:80448/1‑139 (MQ=255) tcagGGAATTTTAAAACACCGATTACAAATGATCAGTATAAAAAAATACTAGATTCTTAAACAGTAGAAGGAAAGCTGCTAAATGCCATGCTCAGCAAAATTGCTGACGGACTTCAAGAGTTGGAGAACCAAGGTGTGc < 4:308074/139‑1 (MQ=255) cagGGCATTTTAAAACACCGATTACAAATGATCAGTATAAAAAAATACTAGATTCTTCAACAGTAGAAGGAAAGCGGCTAAATGCCATGCTCAGCAAAATTGCTGACGGACTTCAAGAGTTGGAGAACCAAGGTGTGc < 8:80448/138‑1 (MQ=255) gCATTTTAAAACACCGATTACAAATGATCAGTATAAAAAAATACTAGATTCTTCAACAGTAGAAGGAAAGCGGCTAAATGCCATGCTCAGCAAAATTGCTGACGGACTTCAAGAGTTGGAGAACCAAGGTGTGCctgtt < 3:219657/139‑1 (MQ=255) gCATTTTAAAACACCGATTACAAATGATCAGTATAAAAAAATACTAGATTCTTCAACAGTAGAAGGAAAGCGGCTAAATGCCATGCTCAGCAAAATTGCTGACGGACTTCAAGAGTTGGAGAACCAAGGTGTGCctgtt < 5:27555/139‑1 (MQ=255) gCATTTTAAAACACCGATTACAAATGATCAGTATAAAAAAATACTAGATTCTTCAACAGTAGAAGGAAAGCGGCTAAATGCCATGCTCAGCAAAATTGCTGACGGACTTCAAGAGTTGGAGAACCAAGGTGTGCctgtt < 6:172429/139‑1 (MQ=255) gCATTTTAAAACACCGATTACAAATGATCAGTATAAAAAAATACTAGATTCTTCAACAGTAGAAGGAAAGCGGCTAAATGCCATGCTCAGCAAAATTGCTGACGGACTTCAAGAGTTGGAGAACCAAGGTGTGCctgtt < 8:76873/139‑1 (MQ=255) gCATTTTAAAACACCGATTACAAATGATCAGTATAAAAAAATACTAGATTCTTCAACAGTAGAAGGAAAGCGGCTAAATGCCATGCTCAGCAAAATTGCTGACGGACTTCAAGAGTTGGAGAACCAAGGTGTGCctgtt < 6:279569/139‑1 (MQ=255) gCATTTTAAAACACCGAATACAAATCATCCGTATAAAAAAATACTAGATTCTTCAACAGTAGAAGGAAAGCGGCTAAATGCCATGCTCAGCAAAATTGCTGACGGACTTCAAGAGTTGGAGAACCAAGGTGTGCctgtt < 5:299681/139‑1 (MQ=255) gCACTTTAAAACACCGATTACAAATTATCATTATAAAAAAATACTAGATTCTTCAACAGTAGAAGGAAAGCGGATAAATGCCATGCTCAGCAAAATTGCTGACGGACTTCAAGAGTTGGAGAACCAAGGTGTGCctgtt < 6:180882/139‑1 (MQ=255) ttttAAAACACCGATTACAAATGATCAGTATAAAAAAATACTAGATTCTTCTACAGTAGAAGGAAAGCGGCTAAATGCCATGCTCAGCAAAATTGCTGACGGCCTTCACGAGTTGGAGACCCAAGGTGTGCctgttctg > 8:9033/1‑139 (MQ=255) tttAAAACACCGATTACAAATGATCAGTATAAAAAAATACTAGATTCTTCAACAGTAGAAGGAAAGCGGCTAAATGCCATGCTCAGCAAAATTGCTGACGGACTTCAAGAGTTGGAGAACCAAGGTGTGCctgttctgt > 1:288752/1‑139 (MQ=255) ttAAAACACCGATTACAAATGATCAGTATAAAAAAATACTAGATTCTTCAACAGTAGAAGGAAAGCGGCTAAATGCCATGCTCAGCAAAATTGCTGACGGACTTCAAGAGTTGGAGAACCAAGGTGTGCctgttctgtt > 5:401955/1‑139 (MQ=255) aaaCACCGATTACAAATGATCAGTATAAAAAAATACTAGATTCTTCAACAGTAGAAGGAAAGCGGCTAAATGCCATGCTCAGCAAAATTGCTGACGGACTTCAAGAGTTGGAGAACCAAGGTGTGCCTGTTCTGTTCa < 1:118022/138‑1 (MQ=255) aaCACCGATTACAAATGATCAGTATAAAAAAATACTAGATTCTTCAACAGTAGAAGGAAAGCGGCTAAATGCCATGCTCAGCAAAATTGCTGACGGACTTCAAGAGTTGGAGAACCAAGGTGTGCCTGTTCTGTTCAgg > 5:330752/1‑139 (MQ=255) acCGATTACAAATGATCAGTATAAAAAAATACTAGATTCTTCAACAGTAGAAGGAAAGCGGCTAAATGCCATGCTCAGCAAAATTGCTGACGGACTTCAAGAGTTGGAGAACCAAGGTGTGCCTGTTCTGTTCAGGCCg < 1:102924/139‑1 (MQ=255) acCGATTACAAATGATCAGTATAAAAAAATACTAGATTCTTCAACAGTAGAAGGAAAGCGGCTAAATGCCATGCTCAGCAAAATTGCTGACGGACTTCAAGAGTTGGAGAACCAAGGTGTGCCTGTTCTGTTCAGGCCg < 7:235999/139‑1 (MQ=255) acCGATTACAAATGATCAGTATAAAAAAATACTAGATTCTTCAACAGTAGAAGGAAAGCGGCTAAATGCCATGCTCAGCAAAATTGCTGACGGACTTCAAGAGTTGGAGAACCAAGGTGTGCCTGTTCTGTTCAGGCCg < 5:261265/139‑1 (MQ=255) acCGATTAAAAATTATCACTATAAAAAAATACTAGAATCTTCAACAGTACAAGGAAAGCCTCTAAATGCCATGCTCAGCAAAATTCCTGACGGACTTCAAGAGTTGGAGAACCAAGGTGTGCCTGTTCTGTTCAGGCCg < 8:148557/139‑1 (MQ=255) cGATTACAAATGATCAGTATAAAAAAATACTAGATTCTTCAACAGTAGAAGGAAAGCGGCTAAATGCCATGCTCAGCAAAATTGCTGACGGACTTCAAGAGTTGGAGAACCAAGGTGTGCCTGTTCTGTTCAGGCCGCt > 4:211656/1‑139 (MQ=255) cGATTACAAATGATCAGTATAAAAAAATACTAGATTCTTCAACAGTAGAAGGAAAGCGGCTAAATGCCATGCTCAGCAAAATTGCTGACGGACTTCAAGAGTTGGAGAACCAAGGTGTGCCTGTTCTGTTCAGGCCGCt > 2:243500/1‑139 (MQ=255) aTTACAAATGATCAGTATAAAAAAATACTAGATTCTTCAACAGTAGAAGGAAAGCGGCTAAATGCCATGCTCAGCAAAATTGCTGACGGACTTCAAGAGTTGGAGAACCAAGGTGTGCCTGTTCTGTTCAGGCCGCTg > 1:107151/1‑138 (MQ=255) aTTACAAATGATCAGTATAAAAAAATACTAGATTCTTCAACAGTAGAAGGAAAGCGGCTAAATGCCATGCTCAGCAAAATTGCTGACGGACTTCAAGAGTTGGAGAACCAAGGTGTGCCTGTTCTGTTCAGGCCGCTg > 3:236598/1‑138 (MQ=255) aaaTGATCAGTATAAAAAAATACTAGATTCTTCAACAGTAGAAGGAAAGCGGCTAAATGCCATGCTCAGCAAAATTGCTGACGGACTTCAAGAGTTGGAGAACCAAGGTGTGCCTGTTCTGTTCAGGCCGCTGCatgaa < 1:243500/139‑1 (MQ=255) gATCATTATAAAAAAATTCTAGATTCTTCAACAGTAGATGGAAAGCGGCTAAATGCCATGCTCAGCAAAATTGCTGACGGAATTCAAGAGTTTGAGAACCAAGGTGTGCCTGTTCTGTTCAGGCCGCTGCatgaaatg < 2:222473/138‑1 (MQ=255) aTCAGTATAAAAAAATACTAGATTCTTCAACAGTAGAAGGAAAGCGGCTAAATGCCATGCTCAGCAAAATTGCTGACGGACTTCAAGAGTTGGAGAACCAAGGTGTGCCTGTTCTGTTCAGGCCGCTGCatgaaatgaa > 7:193496/1‑139 (MQ=255) aTCAGTATAAAAAAATACTAGATTCTTCAACAGTAGAAGGAAAGCGGCTAAATGCCATGCTCAGCAAAATTGCTGACGGACTTCAAGAGTTGGAGAACCAAGGTGTGCCTGTTCTGTTCAGGCCGCTGCatgaaatgaa < 7:284483/139‑1 (MQ=255) tataAAAAAATACTAGATTCTTCAACAGTAGAAGGAAAGCGGCTAAATGCCATGCTCAGCAAAATTGCTGACGGACTTCAAGAGTTGGAGAACCAAGGTGTGCCTGTTCTGTTCAGGCCGCTGCATGAAATGAACGGc > 3:93061/1‑138 (MQ=255) tataAAAAAATACTAGATTCTTCAACAGTAGAAGGAAAGCGGCTAAATGCCATGCTCAGCAAAATTGCTGACGGACTTCAAGAGTTGGAGAACCAAGGTGTGCCTGTTCTGTTCAGGCCGCTGCATGAAATGAACGGc > 5:30545/1‑138 (MQ=255) taAAAAAATACTAGATTCTTCAACAGTAGAAGGAAAGCGGCTAAATGCCATGCTCAGCAAAATTGCTGACGGACTTCAAGAGTTGGAGAACCAAGGTGTGCCTGTTCTGTTCAGGCCGCTGCATGAAATGAACGGCGaa < 2:288752/139‑1 (MQ=255) taAAAAAATACTAGATTCTTCAACAGTAGAAGGAAAGCGGCTAAATGCCATGCTCAGCAAAATTGCTGACGGACTTCAAGAGTTGGAGAACCAAGGTGTGCCTGTTCTGTTCAGGCCGCTGCATGAAATGAACGGCGaa < 5:235919/139‑1 (MQ=255) aaaaATACTAGATTCTTCAACAGTAGAAGGAAAGCGGCTAAATGCCATGCTCAGCAAAATTGCTGACGGACTTCAAGAGTTGGAGAACCAAGGTGTGCCTGTTCTGTTCAGGCCGCTGCATGAAATGAACGGCGAATgg > 6:91597/1‑139 (MQ=255) aaatacTAGATTCTTCAACAGTAGAAGGACAGCGGCTAAATGCCATGCTCAGCAAAATTGCTGACGGACTTCAAGAGTTGGAGAACCAAGGTGTGCCTGTTCTGTTCAGGCCGCTGCATGAAATGAACGGCGAATGGtt < 7:14554/137‑1 (MQ=255) aaatacTAGATTCTTCAACAGTAGAAGGAAAGCGGCTAAATGCCATGCTCAGCAAAATTGCTGACGGACTTCAAGAGTTGGAGAACCAAGGTGTGCCTGTTCTGTTCAGGCCGCTGCATGAAATGAACGGCGAATGGtt < 2:107151/137‑1 (MQ=255) aaatacTAGATTCTTCAACAGTAGAAGGAAAGCGGCTAAATGCCATGCTCAGCAAAATTGCTGACGGACTTCAAGAGTTGGAGAACCAAGGTGTGCCTGTTCTGTTCAGGCCGCTGCATGAAATGAACGGCGAATGGtt < 5:238673/137‑1 (MQ=255) | TGTAAGCTGCAACGGCGATTTAATGTCGTATTGGAAAAATGGCGGAATTCCGCAAATCAGTTTGCACCTGGCGAACCCTGCTTTTCAGTCAGGGCATTTTAAAACACCGATTACAAATGATCAGTATAAAAACATATTAGATTCAGCAACAGCGGAAGGGAAGCGGCTAAATGCCATGCTCAGCAAAATTGCTGACGGACTTCAAGAGTTGGAGAACCAAGGTGTGCCTGTTCTGTTCAGGCCGCTGCATGAAATGAACGGCGAATGGTT > CP006881/596134‑596403 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |