Predicted mutation
evidence seq id position mutation annotation gene description
RA CP006881 2,188,930 A→G D143D (GAT→GAC U712_10965 ← Histidinol‑phosphate aminotransferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0068812,188,9300AG97.2% 219.1 / ‑3.0 71D143D (GAT→GACU712_10965Histidinol‑phosphate aminotransferase
Reads supporting (aligned to +/- strand):  ref base A (1/1);  new base G (31/38);  total (32/39)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.71e-01

GAACAACGAGGACATGAGAAGGAACGCGCTCCAGAAATGCGAGTAATTCCCCTTCTGATGTATAAGTGCCAGTCGGGTTATTCGGACTGCATATCCAAACGACTTGTGTCTGTTCGTCAATCGCTTCAAGCATGGCATCTAAATCATGTGAGCCGTCAGGACGAAGTGCGATTTCACGAACTTCAGCGCCTTCAATGACCGCATTATGTTTATATTGCGGAAAAGTCGGGGCAGCAGTTATCGTGTTAGTTTTATCATTTAAAAATGCCCGG  >  CP006881/2188794‑2189065
                                                                                                                                        |                                                                                                                                       
gAACGACAAGGACACGAGAAGGAACGCGCTCCAGAAATGCGAGTAATTCTCCTTCAGATGTATAAGTGCCAGTCGGATTATTCGGGCTGCATATCCAAACGACTTGTGTCTGTTCGTCGATGGCTTCTAACATGGCGTc                                                                                                                                       >  8:367425/1‑139 (MQ=255)
 aacgacAAGGACACGAGAAGGAACGCGCTCCAGAAATGCGAGTAATTCTCCTTCAGATGTATAAGTGCCAGTCGGATTATTCGGGCTGCATATCCAAACGACTTGTGTCTGTTCGTCGATGGCTTCTAACATGGCGTc                                                                                                                                       >  4:224598/1‑138 (MQ=255)
    gacaaGGACACGAGAAGGAACGCGCTCCAGAAATGCGAGTAATTCTCCTTCAGATGTATAAGTGCCAGTCGGATTATTCGGGCTGCATATCCAAACGACTTGTGTCTGTTCGTCGATGGCTTCTAACATGGCGTCTcaa                                                                                                                                   <  5:431656/135‑1 (MQ=255)
      caaGGACACGAGAAGGAACGCGCTCCAGAAATGCGAGTAATTCTCCTTCAGATGTATAAGTGCCAGTCGGATTATTCGGGCTGCATATCCAAACGACTTGTGTCTGTTCGTCGATGGCTTCTAACATGGCGTCTAAAt                                                                                                                                  >  3:239469/3‑138 (MQ=255)
      caaGGACACGAGAAGGAACGCGCTCCAGAAATGCGAGTAATTCTCCTTCAGATGTATAAGTGCCAGTCGGATTATTCGGGCTGCATATCCAAACGACTTGTGTCTGTTCGTCGATGGCTTCTAACATGGCGTCTAAAt                                                                                                                                  >  5:145411/3‑138 (MQ=255)
           acacGAGAAGGAACGCGCTCCAGAAATGCGAGTAATTCTCCTTCAGATGTATAAGTGCCAGTCGGATTATTCGGGCTGCATATCCAAACGACTTGTGTCTGTTCGTCGATGGCTTCTAACATGGCGTCTAAATCAtgt                                                                                                                             >  2:38831/1‑138 (MQ=255)
            cacgagaAGGAACGCGCTCCAGAAATGCGAGTAATTCTCCTTCAGATGTATAAGTGCCAGTCGGATTATTCGGGCTGCATATCCAAACGACTTGTGTCTGTTCGTCGATGGCTTCTAACATGGCGTCTAAATCATGTGa                                                                                                                           <  8:413850/136‑1 (MQ=255)
                  aaGGAACGCGCTCCAGAAATGCGAGTAATTCTCCTTCAGATGTATAAGTGCCAGTCGGATTATTCGGGCTGCATATCCAAACGACTTGTGTCTGTTCGTCGATGGCTTCTAACATGGCGTCTAAATCATGTGAGCCGTc                                                                                                                     <  1:152924/139‑1 (MQ=255)
                               cAGAAATGCGAGTAATTCTCCTTCAGATGTATAAGTGCCAGTCGGATTATTCGGGCTGCATATCCAAACGACTTGTGTCTGTTCGTCGATGGCTTCTAACATGGCGTCTAAATCATGTGAGCCGTCGGGACGAAGTg                                                                                                          <  4:436514/137‑1 (MQ=255)
                                     tGCGAGTAATTCTCCTTCAGATGTATAAGTGCCAGTCGGATTATTCGGGCTGCATATCCAAACGACTTGTGTCTGTTCGTCGATGGCTTCTAACATGGCGTCTAAATCAGGTTAGCCGGCGGGACGAATGGCAATTTc                                                                                                   >  1:432680/1‑138 (MQ=255)
                                     tGCGAGTAATTATCCTTCAGATGTATCAGTGCCTGGCGGATTATTCGGGCGGCATATCCAAACGACTTGTGTCTGTTCGTCGATGGCTTCTAACATGGCGTCTAAATCATGTGAGCCGTCGGGACGAAGTGCAATTTCa                                                                                                  <  3:58718/139‑1 (MQ=255)
                                       cGAGTATTTCTCCTTCAGATGTATAAGTGCCAGTCGGATTATTCGGGCTGCATATCCAAACGACTTGTGTCTGTTCGTCGATGGCTTCTAACATGGCGTCTAAATCATGTGAGCCGTCGGGACGAAGTGCAATTTCACg                                                                                                <  3:363669/139‑1 (MQ=255)
                                       cGAGTAATTCTCCTTCAGATGTATAAGTGCCAGTCGGATTATTCGGGCTGCATATCCAAACGACTTGTGTCTGTTCGTCGATGGCTTCTAACATGGCGTCTAAATCATGTGAGCCGTCGGGACGAAGTGCAATTTCACg                                                                                                <  6:181330/139‑1 (MQ=255)
                                       cGAGTAATTCTCCTTCAGATGTATAAGTGCCAGTCGGATTATTCGGGCTGCATATCCAAACGACTTGTGTCTGTTCGTCGATGGCTTCTAACATGGCGTCTAAATCATGTGAGCCGTCGGGACGAAGTGCAATTTCACg                                                                                                >  8:176394/1‑139 (MQ=255)
                                       cGAGTAATTCTCCTTCAGATGTATAAGTGCCAGTCGGATTATTCGGGCTGCATATCCAAACGACTTGTGTCTGTTCGTCGATGGCTTCTAACATGGCGTCTAAATCATGTGAGCCGTCGGGACGAAGTGCAATTTCACg                                                                                                >  8:334439/1‑139 (MQ=255)
                                       cGAGTAATTCTCCTTCAGATGTATAAGTGCCAGTCGGATTATTCGGGCTGCATATCCAAACGACTTGTGTCTGTTCGTCGATGGCTTCTAACATGGCGTCTAAATCATGTGAGCCGTCGGGACGAAGTGCAATTTCACg                                                                                                <  4:391647/139‑1 (MQ=255)
                                       cGAGTAATTCTCCTTCAGATGTATAAGTGCCAGTCGGATTATTCGGGCTGCATATCCAAACGACTTGTGTCTGTTCGTCGATGGCTTCTAACATGGCGTCTAAATCATGTGAGCCGTCGGGACGAAGTGCAATTTCACg                                                                                                >  4:192326/1‑139 (MQ=255)
                                       cGAGTAATTCTCCTTCAGATGTATAAGTGCCAGTCGGATTATTCGGGCTGCATATCCAAACGACTTGTGTCTGTTCGTCGATGGCTTCTAACATGGCGTCTAAATCATGTGAGCCGTCGGGACGAAGTGCAATTTCACg                                                                                                <  3:304399/139‑1 (MQ=255)
                                       cGAGTAATTCGCCTTCACAGGTATACGTGCCAGGCGGATAAGTCGGGCGGCATAGCCAAACGACTTGTGTCTGTTCGTCGATCGCTGCTAACATGGCGTCTAAATCATGTGAGCCGTCGGGACGAAGTGCAATTTCACg                                                                                                <  6:141053/139‑1 (MQ=255)
                                             aTTCTCCTTCAGATGTATAAGTGCCAGTCGGATTATTCGGGCTGCATATCCAAACGACTTGTGTCTGTTCGTCGATGGCTTCTAACATGGCGTCTAAATCATGTGAGCCGTCGGGACGAAGTGCAATTTCACGTACTTc                                                                                          <  7:242429/139‑1 (MQ=255)
                                                ctccTTCAGATGTATAAGTGCCAGTCGGATTATTCGGGCTGCATATCCAAACGACTTGTGTCTGTTCGTCGATGGCTTCTAACATGGCGTCTAAATCATGTGAGCCGTCGGGACGAAGTGCAATTTCACGTACTTCAg                                                                                        <  4:379745/136‑1 (MQ=255)
                                                ctccTTCAGATGTATAAGTGCCAGTCGGATTATTCGGGCTGCATATCCAAACGACTTGTGTCTGTTCGTCGATGGCTTCTAACATGGCGTCTAAATCATGTGAGCCGTCGGGACGAAGTGCAATTTCACGTACTTCAg                                                                                        <  3:117578/136‑1 (MQ=255)
                                                 tccTTCAGATGTATAAGTGCCAGTCGGATTATTCGGGCTGCATATCCAAACGACTTGTGTCTGTTCGTCGATGGCTTCTAACATGGCGTCTAAATCATGTGAGCCGTCGGGACGAAGTGCAATTTCACGTACTTCAgca                                                                                      <  6:145411/138‑2 (MQ=255)
                                                   cTTCAGATGTTTAAGTGCCAGTCGGATTTTTCGGGCTGCATATCCACACGACTTGTGTCTGTTCGTCGATGGCTTCTAACATGGCGGCTAAATCATGTGAGCCGTCGGGACGAAGTGCAATTTCACGTACTTCAgca                                                                                      <  6:367440/137‑2 (MQ=255)
                                                   cTTCAGATGTATAAGTGCCAGTCGGATTATTCGGGCTGCATATCCAAACGACTTGTGTCTGTTCGTCGATGGCTTCTAACATGGCGTCTAAATCATGTGAGCCGTCGGGACGAAGTGCAATTTCACGTACTTCAGCAcc                                                                                    >  3:28152/1‑139 (MQ=255)
                                                          tGTATAAGTGCCAGTCGGATTATTCGGGCTGCATATCCAAACGACTTGTGTCTGTTCGTCGATGGCTTCTAACATGGCGTCTAAATCATGTGAGCCGTCGGGACGAAGTGCAATTTCACGTACTTCAGCACCTTCAAta                                                                             <  3:192326/139‑2 (MQ=255)
                                                              taAGTGCCAGTCGGATTATTCGGGCTGCATATCCAAACGACTTGTGTCTGTTCGTCGATGGCTTCTAACATGGCGTCTAAATCATGTGAGCCGTCGGGACGAAGTGCAATTTCACGTACTTCAGCACCTTCAATAACCg                                                                         >  6:213581/1‑139 (MQ=255)
                                                                 gTGCCAGTCGGATTATTCGGGCTGCATATCCAAACGACTTGTGTCTGTTCGTCGATGGCTTCTAACATGGCGTCTAAATCATGTGAGCCGTCGGGACGAAGTGCAATTTCACGTACTTCAGCACCTTCAATAACCGCAt                                                                      <  5:32496/139‑1 (MQ=255)
                                                                 gTGCCAGTCGGATTATTCGGGCTGCATATCCAAACGACTTGTGTCTGTTCGTCGATGGCTTCTAACATGGCGTCTAAATCATGTGAGCCGTCGGGACGAAGTGCAATTTCACGTACTTCAGCACCTTCAATAACCGCAt                                                                      <  6:222438/139‑1 (MQ=255)
                                                                 gTGCCAGTCGGATTATTCGGGCTGCATATCCAAACGACTTGTGTCTGTTCGTCGATGGCTTCTAACATGGCGTCTAAATCATGTGAGCCGTCGGGACGAAGTGCAATTTCACGTACTTCAGCACCTTCAATAACCGCAt                                                                      <  4:28152/139‑1 (MQ=255)
                                                                 gTGCCAGTCGGATTATTCGGGCTGCATATCCAAACGACTTGTGTCTGTTCGTCGATGGCTTCTAACATGGCGTCTAAATCATGTGAGCCGTCGGGACGAAGTGCAATTTCACGTACTTCAGCACCTTCAATAACCGCAt                                                                      <  8:201582/139‑1 (MQ=255)
                                                                 gTGCCAGTCGGATTATTCGGGCTGCATATCCAAACGACTTGTGTCTGTTCGTCGATGGCTTCTAACATGGCGTCTAAATCATGTGAGCCGTCGGGACGAAGTGCAATTTCACGTACTTCAGCACCTTCAATAACCGCAt                                                                      <  3:224598/139‑1 (MQ=255)
                                                                   gCCAGTCGGGTTATTCGGACTGCATATCCAAACGACTTGTGTCTGTTCGTCAATCGCTTCAAGCATGGCATCTAAATCATGTGAGCCGTCAGGACGAAGTGCGATTTCACGAACTTCAGCGCCTTCAATg                                                                             >  4:155194/1‑130 (MQ=255)
                                                                   gCCAGTCGGGTTATTCGGACTGCATATCCAAACGACTTGTGTCTGTTCGTCAATCGCTTCAAGCATGGCATCTAAATCATGTGAGCCGTCAGGACGAAGTGCGATTTCACGAACTTCAGCGCCTTCAATg                                                                             <  3:155194/130‑1 (MQ=255)
                                                                     cAGTCGGATTATTCGGGCTGCATATCCAAACGACTTGTGTCTGTTCGTCGATGGCTTCTAACATGGCGTCTAAATCATGTGAGCCGTCGGGACGATGTGCAAATTCACGTACTTCAGCACCTTCAATAACCGCATTaag                                                                  >  3:88293/1‑137 (MQ=255)
                                                                      aGTCGGATTATTCGGGCTGCATATCCAAACGACTTGTGTCTGTTCGTCGATGGCTTCTAACATGGCGTCTAAATCATGTGAGCCGTCGGGACGAAGTGCAATTTCa                                                                                                  >  5:104756/1‑106 (MQ=255)
                                                                      aGTCGGATTATTCGGGCTGCATATCCAAACGACTTGTGTCTGTTCGTCGATGGCTTCTAACATGGCGTCTAAATCATGTGAGCCGTCGGGACGAAGTGCAATTTCa                                                                                                  <  6:104756/106‑1 (MQ=255)
                                                                      aGTCGGATTATTCGGGCTGCATATCCAAACGACTTGTGTCTGTTCGTCGATGGCTTCTAACATGGCGTCTAAATCATGTGAGCCGTCGGGACGAAGTGCAATTTCACGTACTTCAGCACCTTCAATAACCGCATTATGt                                                                 >  4:253402/1‑139 (MQ=255)
                                                                      aGTCGGATTATTCGGGCTGCATATCCAAACGACTTGTGTCTGTTCGTCGATGGCTTCTAACATGGCGTCTAAATCATGTGAGCCGTCGGGACGAAGTGCAATTTCACGTACTTCAGCACCTTCAATAACCGCATTATGt                                                                 >  8:305377/1‑139 (MQ=255)
                                                                      aGTCGGATTATTCGGGCTGCATATCCAAACGACTTGTGTCTGTTCGTCGATGGCTTCTAACATGGCGTCTAAATCATGTGAGCCGTCGGGACGAAGTGCAATTTCACGTACTTCAGCACCTTCAATAACCGCATTATGt                                                                 >  5:401940/1‑139 (MQ=255)
                                                                           gattATTCGGGATGCATATCCAAACGACTTTTGTCTGTTAGTCGATTGCTTCTAACATGGCGTCTAAATCATGTGAGCCGTAGGGACGAAGTGCAATTTCACGTACTTCAGCACCTTCAATAACCGCATTATGTTtata                                                            <  2:432680/137‑1 (MQ=255)
                                                                            attATTCGGGCTGCATATCCAAACGACTTGTGTCTGTTCGTCGATGGCTTCTAACATGGCGTCTAAAGCATGTGAGCCGTCGGGACGAAGTGCAAGTTAACGTACTTCAGCACCTTCAATAACCGCATTATGTTTatat                                                           >  7:260716/2‑139 (MQ=255)
                                                                                     gcTGCATATCCAAACGACTTGTGTCTGTTCGTCGATGGCTTCTAACATGGCGTCTAAATCATGTGAGCCGTCGGGACGAAGTGCAATTTCACGTACTTCAGCACCTTCAATAACCGCa                                                                       <  3:355777/117‑1 (MQ=255)
                                                                                     gcTGCATATCCAAACGACTTGTGTCTGTTCGTCGATGGCTTCTAACATGGCGTCTAAATCATGTGAGCCGTCGGGACGAAGTGCAATTTCACGTACTTCAGCACCTTCAATAACCGCa                                                                       >  4:355777/2‑118 (MQ=255)
                                                                                         cATATCCAAACGACTTGTGTCTGTTCGTCGATGGCTTCTAACATGGCGTCTAAATCATGTGAGCCGTCGGGACGAAGTGCAATTTCACGTACTTCAGCACCTTCAATAACCGCATTATGTTTATATTGCGGAAAAGt                                                <  3:253402/137‑1 (MQ=255)
                                                                                          atatCCAAACGACTTGTGTCTGTTCGTCGATGGCTTCTAACATGGCGTCTAAATCATGTGAGCCGTCGGGACGAAGTGCAATTTCACGTACTTCATCACCTTCAATAACCGCATTATGTTTATATTGCGGAAAAGTggg                                             >  4:331805/1‑139 (MQ=255)
                                                                                             tCCACACGACTTGTGTCTGTTCGTCGATGGCTTCTAACATGGCGTCTAAATCATGTGAGCCGTCGGGACGAAGTGCAATTTCACGTACTTCAGCACCTTCAATAACCGCATTATGTTTATATTGCGGAAAAGTGGGGgc                                          <  7:176394/139‑1 (MQ=255)
                                                                                             tCCAAACGACTTGTGTCTGTTCGTCGATGGCTTCTAACATGGCGTCTAAATCATGTGAGCCGTCGGGACGAAGTGCAATTTCACGTACTTCAGCACCTTCAATAACCGCATTATGTTTATATTGCGGAAAAGTGGGGgc                                          <  7:182176/139‑1 (MQ=255)
                                                                                             gccAAACGACTTGTGTCTGTTCGTCGATGGCTTCTAACATGGCGTCTAAATCATGTGAGCCGTCGGGACGAAGTGCAATTTCACGTACTTCAGCACCTTCAATAACCGCATTATGTTTATATTGCGGAAAAGTGGGGgc                                          <  3:164438/138‑1 (MQ=255)
                                                                                               cAAACGACTTGTGTCTGTTCGTCGATGGCTTCTAACATCGCGGCTAAATCATGTGAGCCGTCGGGACGAAGTGCAATTTCACGTACTTCAGCACCTTCAATAACCGCTTTATGTTTATATTGCGGAAAAGTGGGGgcag                                        <  7:33512/139‑1 (MQ=255)
                                                                                                 aaCGACTTGTGTCTGTTCGTCGATGGCTTCTAACATGGCGTCTAAATCATGTGAGCCGTCGGGACGAAGTGCAATTTCACGTACTTCAGCACCTTCAATAACCGCAt                                                                      <  4:100699/107‑1 (MQ=255)
                                                                                                 aaCGACTTGTGTCTGTTCGTCGATGGCTTCTAACATGGCGTCTAAATCATGTGAGCCGTCGGGACGAAGTGCAATTTCACGTACTTCAGCACCTTCAATAACCGCAt                                                                      >  3:100699/1‑107 (MQ=255)
                                                                                                 aaCGACTTGTGTCTGTTCGTCGATGGCTTCTAACATGGCGTCTAAATCATGTGAGCCGTCGGGACGAAGTGCAATTTCACGTACTTCAGCACCTTCAATAACCGCATTATGTTTATATTGCGGAAAAGt                                                <  1:390101/129‑1 (MQ=255)
                                                                                                 aaCGACTTGTGTCTGTTCGTCGATGGCTTCTAACATGGCGTCTAAATCATGTGAGCCGTCGGGACGAAGTGCAATTTCACGTACTTCAGCACCTTCAATAACCGCATTATGTTTATATTGCGGAAAAGt                                                >  2:390101/1‑129 (MQ=255)
                                                                                                 aaCGACTTGTGTCTGTGCGTCGATGGCTTCTAACATGGCGTCTAAATCATGTGAGCCGTCGGGACGAAGTGCAATTTCACGTACTTCAGCACCTTCAATAACCGCATTATGTTTATATTGCGGAAAAGTGGGGgcagca                                      <  8:20380/139‑1 (MQ=255)
                                                                                                  aCGACTTGTGTCTGTTCGTCGATGGCTTCTAACATGGCGTCTAAATCATGTGAGCCGTCGGGACGAAGTGCAATTTCACGTACTTCAGCACCTTCAATAACCGCATTATGTTTATATTGCGGAAAAGTGGGGGcagcag                                     <  2:403055/139‑1 (MQ=255)
                                                                                                   cGACTTGTGTCTGTTCGTCGATGGCTTCTAACATGGCGTCTAAATCATGTGAGCCGTCGGGACGAAGTGCAATTTCAAGTACTTCAGCACCTTCAATAACCGCATTATGTTTATATTGCGGAAAAGTGGGGGcagcag                                     >  2:100956/1‑138 (MQ=255)
                                                                                                      cTTGTGTCTGTTCGTCGATGGCTTCTAACATGGCGTCTAAATCATGTGAGCCGTCGGGACGAAGTGCAATTTCACGTACTTCAGCACCTTCAATAACCGCATTATGTTTATATTGCGGAAAAGTGGGGGCAGCAGtaac                                 <  5:213581/139‑4 (MQ=255)
                                                                                                         gtgtCTGTTCGTCGATGGCTTCTAACATGGCGTCTAAATCATGTGAGCCGTCGGGACGAAGTGAAATTTAACGTACATCCTCACCTTCAAATACCGCATTATGTTTATATTTCGGAAAAGTTGGGGCAGCAGtacacgc                              >  4:164438/1‑133 (MQ=255)
                                                                                                              tGTTCGTCGATGGCTTCTAACATGGCGTCTAAATCATGTGAGCCGTCGGGACGAAGTGCAATTTCACGTACTTCAGCACCTTAAATAACCGCATTATGTTTATATTGCGGAAAAGTGGGGGCAGCAGTAACCGTGtttg                         >  6:393617/1‑137 (MQ=255)
                                                                                                                ttCGTCGATGGCTTCTAACATGGCGTCTAAATCATGTGAGCCGTCGGGACGAAGTGCAATTTCCCGTACTTCAGCACCTTCAATAACCGCATTATGTTTATATTGCGGAAAAGTGGGGGCAGCAGTAACCGTGgttgtt                       >  7:412948/1‑139 (MQ=255)
                                                                                                                   gTCGATGGCTTCTAACATGGCGTCTAAATCATGTGAGCCGTCGGGACGAAGTGCAATTTCACGTACTTCAGCACCTTCAATAACCGCATTATGTTTATATTGCGGAAAAGTGGGGGCAGCAGTAACCGTGTTTGTTTTa                    <  7:290499/139‑1 (MQ=255)
                                                                                                                     cgatggCTTCTAACATGGCGTCTAAATCATGTGAGCCGTCGGGACGAAGTGCAATTTCACGTACTTCAGCACCTTCAATAACCGCATTATGTTTATATTGCGGAAAAGTGGGGGCAGCAGTAACCGTGTTTGTTTTATc                  >  6:307260/6‑139 (MQ=255)
                                                                                                                          gCTTCTAACATGGCGTCTAAATCATGTGAGCCGTCGGGACGAAGTGCAATTTCACg                                                                                                <  1:64221/56‑1 (MQ=255)
                                                                                                                          gCTTCTAACATGGCGTCTAAATCATGTGAGCCGTCGGGACGAAGTGCAATTTCACg                                                                                                >  2:64221/1‑56 (MQ=255)
                                                                                                                          gCTTCTAACATGGCGTCTAAATCATGTGAGCCGTCGGGACGAAGTGCAATTTCACGTACTTCAGCACCTTCAATAAACGCATTATGTTTATATTTCGGAAAAGTGGGGGCAGCAGTAACCGTGTTTGTTTTATCGttt              >  5:123336/1‑138 (MQ=255)
                                                                                                                                   aTGGCGTCTAAATCATGTGAGCCGTCGGGACGAAGTGCAATTTCACGTACTTCAGCACCTTCAATAACCGCATTATGTTTATATTGCGGAAAAGTGGGGGCAGCAGTAACCGTGTTTGTTTTATCGTTTAAAAATGccc    <  1:38831/139‑1 (MQ=255)
                                                                                                                                     ggCGTCTAAATCATGTGAGCCGTCGGGACGAAGTGCAATTTCACGTACTTCAGCACCTTCAATAACCGCATTATGTTTATATTGCGGAAAAGTGGGGGCAGCAGTAACCgtgt                            >  7:367766/1‑113 (MQ=255)
                                                                                                                                     ggCGTCTAAATCATGTGAGCCGTCGGGACGAAGTGCAATTTCACGTACTTCAGCACCTTCAATAACCGCATTATGTTTATATTGCGGAAAAGTGGGGGCAGCAGTAACCgtgt                            <  8:367766/113‑1 (MQ=255)
                                                                                                                                     ggCGTCTAAATCATGTGAGCCGTCGGGACGAAGTGCAATTTCACGTACTTCAGCACCTTCAATAACCGCATTATGTTTATATTGCGGAAAAGTGGGGGCAGCAGTAACCGTGTTTGTTTTATCGTTTAAAAATGCCCgg  >  4:424040/1‑139 (MQ=255)
                                                                                                                                     ggCGTCTAAATCATGTGAGCCGTCGGGACGAAGTGCAATTTCACGTACTTCAGCACCTTCAATAACCGCATTATGTTTATATTGCGGAAAAGTGGGGGCAGCAGTAACCGTGTTTGTTTTATCGTTTAAAAATGCCCgg  >  2:49612/1‑139 (MQ=255)
                                                                                                                                        |                                                                                                                                       
GAACAACGAGGACATGAGAAGGAACGCGCTCCAGAAATGCGAGTAATTCCCCTTCTGATGTATAAGTGCCAGTCGGGTTATTCGGACTGCATATCCAAACGACTTGTGTCTGTTCGTCAATCGCTTCAAGCATGGCATCTAAATCATGTGAGCCGTCAGGACGAAGTGCGATTTCACGAACTTCAGCGCCTTCAATGACCGCATTATGTTTATATTGCGGAAAAGTCGGGGCAGCAGTTATCGTGTTAGTTTTATCATTTAAAAATGCCCGG  >  CP006881/2188794‑2189065

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: