Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
RA | CP006881 | 2,189,182 | C→G | A59A (GCG→GCC) | U712_10965 ← | Histidinol‑phosphate aminotransferase |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | CP006881 | 2,189,182 | 0 | C | G | 97.6% | 267.2 / NA | 84 | A59A (GCG→GCC) | U712_10965 | Histidinol‑phosphate aminotransferase |
Reads supporting (aligned to +/- strand): ref base C (0/0); major base G (45/37); minor base T (1/1); total (46/38) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
TTTAAAAATGCCCGGCAGATGATCTGAATGATTTCATCTGAACCGTTTCCGAAAATAAGTGATGTTTCACTGACATTGAGGTGCTCACTGAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGATAAAGCGCAAGCTGTTGAATCTCATGTTGAAGCGCCTCTTTTGCAGCTTCTGAACAGCCGTACGGATTTTCGTTTGAAGCAAGCTTCACAACTTTATCCAAGCCATATTCTGATTTCACTGCTTCAATCGGCTTTCCAGG > CP006881/2189051‑2189316 | tttAAAAATGCCCGGCAGATGATCTGTATGATTTCATCAGAACCGTTGCCGAAAATAAGTGATGTTTCGCTGACATTGAGGTGCTTACTGAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCt > 8:39913/1‑139 (MQ=255) tAAAAATGCCCGGCAGATGATCTGTATGATTTCATCAGAACCGTTGCCGAAAATAAGTGATGTTTCGCTGACATTGAGGTGCTTACTGAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGt > 8:40947/1‑139 (MQ=255) cTGTATGATTTCATCATAACCGTTGCCGAAAATAAGGTTTGTTTCGCTGACATTGAGGTGCTTACTGAGCCTTGTCCCCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAgcgc < 6:586/138‑1 (MQ=255) cTGTATGATTTCATCAGAACCGTTGCCGAAAATAAGTGATGTTTCGCTGACATTGAGGTGCTTACTGAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGcc > 1:265317/1‑139 (MQ=255) aTTTCATCAGAACGGTTGCCGAAAATAAGTGATGTTTCGCTGACATTGAGGTGCTTACTGAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTg > 8:14382/1‑139 (MQ=255) tttCATCAGAACCGTTGCCGAAAATAAGTGATGTTTCGCTGACATTGAGGTGCTTACTGAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTg > 5:226331/1‑138 (MQ=255) tttCATCAGAACCGTTGCCGAAAATAAGTGATGTTTCGCTGACATTGAGGTGCTTACTGAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGc < 6:199296/139‑1 (MQ=255) tttCATCAGAACCGTTGCCGAAAATAAGTGATGTTTCGCTGACATTGAGGTGCTTACTGAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGc < 3:138209/139‑1 (MQ=255) ttCATCAGAACCGTTGCCGAAAATAAGTGATGTTTCGCTGACATTGAGGTGCTTACTGAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTg > 7:373231/1‑137 (MQ=255) ttCATCAGAACCGTTGCCGAAAATAAGTGATGTTTCGCTGACATTGAGGTGCTTACTGAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTg > 1:289094/1‑137 (MQ=255) tcatcaGAACCGTTGCCGAAAATAAGTGATGTTTCGCTGACATTGAGGTGCTTACTGAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGc < 2:289094/137‑1 (MQ=255) cATCAGAACCGTTGCCGAAAATAAGTGATGTTTCGCTGACATTGAGGTGCTTACTGAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAGGCGCCTCTTTTGCGGc > 5:364041/1‑139 (MQ=255) cATCAGAACCGTTGCCGAAAATAAGTGATGTTTCGCTGACATTGAGGTGCTTACTGAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCTCCTCTTTTGCAga > 1:55406/1‑138 (MQ=255) tcagAACCGTTGCCGAAAATAAGTGATGTTTCGCTGACATTGAGGTGCTTACTGAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGcct < 7:406783/136‑3 (MQ=255) tcagAACCGTTGCCGAAAATAAGTGATGTTTCGCTGACATTGAGGTGCTTACTGAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGcct > 8:406783/4‑137 (MQ=255) agcGTTTCCGAATATAAGTGATGTTTCGGTGACATTGTGGTTCTTACTGTGCCTTGTCCGCAAAGCGGCGCTATACCCGTGGGGGTTAATGGATAGGTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGaa < 4:378977/137‑1 (MQ=255) aCCGTTGCCGAAAATAAGTGATGTTTCGCTGACATTGAGGTGCTTACTGAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGaa < 6:154942/139‑1 (MQ=255) ccGTTGCCGAAAATAAGTGATGTTTCGCTGACATTGAGGTGCTTACTGAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAAc < 7:40947/139‑1 (MQ=255) ccGTTGCCGAAAATAAGTGATGTTTCGCTGACATTGAGGTGCTTACTGAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAAc < 6:420784/139‑1 (MQ=255) ttgccGAAAATAAGTGATGTTTCGCTGACATTGAGGTGCTTACTGAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGtt > 4:17590/4‑97 (MQ=255) ttgccGAAAATAAGTGATGTTTCGCTGACATTGAGGTGCTTACTGAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGtt < 3:17590/94‑1 (MQ=255) ttgccGAAAATAAGTGATGTTTCGCTGACATTGAGGTGCTTACTGAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGaa > 1:329330/4‑135 (MQ=255) ttgccGAAAATAAGTGATGTTTCGCTGACATTGAGGTGCTTACTGAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGaa < 7:317343/132‑1 (MQ=255) ttgccGAAAATAAGTGATGTTTCGCTGACATTGAGGTGCTTACTGAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGaa < 2:329330/132‑1 (MQ=255) ttgccGAAAATAAGTGATGTTTCGCTGACATTGAGGTGCTTACTGAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGaa > 8:317343/4‑135 (MQ=255) ttgccGAAAATAAGTGATGTTTCGCTGACATTGAGGTGCTTACTGAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGc > 3:397174/4‑139 (MQ=255) ttgccGAAAATAAGTGATGTTTCGCTGACATTGAGGTGCTTACTGAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGc > 5:247609/4‑139 (MQ=255) ttgccGAAAATAAGTGATGTTTCGCTGAAATTGAGGTGCTTACTGAGCCTTGTCCGCAAAGAGGCGCTATACCCGTCCGGGTAAAGTGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGAAGCCTCTGAACAGc > 5:11799/4‑139 (MQ=255) ccGAAAATAAGTGATGTTTCGCTGACATTGAGGTGCTTACTGAGCCTTGTCCGC‑AAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGt < 8:32562/138‑1 (MQ=255) gAAAATAAGTGATGTTTCGCTGACATTGAGGTGCTTACTGAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTaa < 8:373231/139‑2 (MQ=255) aaTAAGTGATGTTTCGCTGACATTGAGGGGCTTACTGAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGa < 6:397697/139‑1 (MQ=255) aTGTTTCGCTGACATTGAGGTGCTTACTGAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGtt < 8:50870/139‑1 (MQ=255) gcTGACATTGAGGTGCTTACTGAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGaagca < 5:139654/138‑1 (MQ=255) gcTGACATTGAGGTGCTTACTGAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGaagca < 7:191075/138‑1 (MQ=255) tagaTTGAGGTGCTTACTTAGCCTTGTCCGCAAAGCGTCGCTATACAGGTCCGGGTAAAGTTCTAGCTTTTGAATCTAATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGaagcaag < 4:320110/135‑1 (MQ=255) ttGAGGTGCTTACTGAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTca < 6:247609/139‑1 (MQ=255) ttGAGGTGCTTACTGAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTca < 2:265317/139‑1 (MQ=255) gTGCTTACTGAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTCACAAc > 3:320110/1‑138 (MQ=255) cttaCTGAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTCACAACTTTa > 3:324658/4‑139 (MQ=255) cttaCTGAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTCACAACTTTa > 1:395185/4‑139 (MQ=255) aCTGAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGaagca < 2:60303/121‑1 (MQ=255) aCTGAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGaagca > 1:60303/1‑121 (MQ=255) cTGAGCCTTGTCCGCAAAGCGGCGCTATCCCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTCACAACTTTATcc < 6:123336/138‑1 (MQ=255) tGAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTca > 3:270654/1‑126 (MQ=255) tGAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTca < 4:270654/126‑1 (MQ=255) gAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTCACAACTTTATCCAAg > 1:1614/1‑139 (MQ=255) aGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTCACAACTTTCTCCAAGc > 7:142207/1‑139 (MQ=255) aGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTCACAACTTTATCCAAGc > 4:364516/1‑139 (MQ=255) cTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGaa > 4:254103/1‑87 (MQ=255) cTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGaa < 3:254103/87‑1 (MQ=255) cTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTCACAACt > 7:126389/1‑126 (MQ=255) cTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTCACAACt < 8:126389/126‑1 (MQ=255) tGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGCATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTCACAACTTTATCCAAGCCatat > 8:299129/1‑139 (MQ=255) tGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTCACAACTTTATCCAAGCCatat > 6:204033/1‑139 (MQ=255) gTCCGCAAATCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAgcgc > 4:134676/1‑65 (MQ=255) gTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAgcgc < 3:134676/65‑1 (MQ=255) gTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGATGCAAGCTTCACAACTTTATCCAAGCCATAtt > 6:279042/1‑139 (MQ=255) gTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTCACAACTTTATCCAAGCCATAtt > 3:36498/1‑139 (MQ=255) gTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTCACAACTTTATCCAAGCCATAtt > 7:55446/1‑139 (MQ=255) gcggcgCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTCACAACTTTATCCAAGCCATATTCTGATTTCa < 2:395185/139‑1 (MQ=255) gcggcgCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTCACAACTTTATCCAAGCCATATTCTGATTTCa < 4:324658/139‑1 (MQ=255) taCCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTCACAACTTTATCCAAGCCATATTCTGATTTCACTGCTTCaa > 7:216567/1‑139 (MQ=255) aCCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTCACAACTTTATCCAAGCCATATTCTGATTTCACTGCTTCAAt < 4:36498/139‑1 (MQ=255) gTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGc > 6:405436/1‑51 (MQ=255) gTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGc < 5:405436/51‑1 (MQ=255) gTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGcct > 1:162121/1‑54 (MQ=255) gTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGcct < 2:162121/56‑3 (MQ=255) gTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGACGCAAGCTTCACAACTTTATCCAAGCCATATTCTGCTTTCACTGCTTCAATCGGc > 4:17299/1‑139 (MQ=255) gTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCATGCTTCACAACTTTATCCAAGCCATATTCTGATTTCACTGCTTCAATCGGc > 5:67610/1‑139 (MQ=255) gTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTca > 6:8317/1‑95 (MQ=255) gTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTca < 7:300186/95‑1 (MQ=255) gTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTca < 5:8317/95‑1 (MQ=255) gTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTca > 8:300186/1‑95 (MQ=255) gTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTCACTACTTTATCCAAGCAATATTCTGATTTCACTGCTTCAATCGGc > 7:162650/1‑139 (MQ=255) gTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTCACAACTTTATCCAAGCCATATTCTGATTTCa > 8:10130/1‑125 (MQ=255) gTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTCACAACTTTATCCAAGCCATATTCTGATTTCa < 7:10130/125‑1 (MQ=255) gTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTCACAACTTTATCCAAGCCATATTCTGATTTCACTGCTTCAATCGGc > 7:62841/1‑139 (MQ=255) gTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTCACAACTTTATCCAAGCCATATTCTGATTTCACTGCTTCAATCGGc > 4:398055/1‑139 (MQ=255) gTCCGGGGAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTGCACACCTTTATCCACGCCAGATTCTGATGTCACTGCTTCAATCGGc > 1:254170/1‑139 (MQ=255) tCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTCACAACTTTATCCAAGCCATATTCTGATTTCACTGCTTCAATCGGCt > 3:375491/1‑139 (MQ=255) ggtAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCTGCCTCTGaa < 5:389597/54‑1 (MQ=255) ggtAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTCACAACTTTATCCAAGcc > 2:282943/3‑106 (MQ=255) ggtAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTCACAACTTTATCCAAGcc < 1:282943/104‑1 (MQ=255) aaGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTCACAACTTTATCCAAGCCATATTCTGATTTCACTGCTTCAATCGGCTTTCCAgg < 6:226331/138‑1 (MQ=255) | TTTAAAAATGCCCGGCAGATGATCTGAATGATTTCATCTGAACCGTTTCCGAAAATAAGTGATGTTTCACTGACATTGAGGTGCTCACTGAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGATAAAGCGCAAGCTGTTGAATCTCATGTTGAAGCGCCTCTTTTGCAGCTTCTGAACAGCCGTACGGATTTTCGTTTGAAGCAAGCTTCACAACTTTATCCAAGCCATATTCTGATTTCACTGCTTCAATCGGCTTTCCAGG > CP006881/2189051‑2189316 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |