| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP006881 | 2,189,203 | T→A | Q52H (CAA→CAT) | U712_10965 ← | Histidinol‑phosphate aminotransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 2,189,203 | 0 | T | A | 100.0% | 323.4 / NA | 101 | Q52H (CAA→CAT) | U712_10965 | Histidinol‑phosphate aminotransferase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base A (54/47); total (54/47) | |||||||||||
Only 100 of 101 total aligned reads displayed.
CTGAATGATTTCATCTGAACCGTTTCCGAAAATAAGTGATGTTTCACTGACATTGAGGTGCTCACTGAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGATAAAGCGCAAGCTGTTGAATCTCATGTTGAAGCGCCTCTTTTGCAGCTTCTGAACAGCCGTACGGATTTTCGTTTGAAGCAAGCTTCACAACTTTATCCAAGCCATATTCTGATTTCACTGCTTCAATCGGCTTTCCAGGCTGATAAGGCTTCAG > CP006881/2189074‑2189331 | cTGTATGATTTCATCATAACCGTTGCCGAAAATAAGGTTTGTTTCGCTGACATTGAGGTGCTTACTGAGCCTTGTCCCCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAgcgc < 6:586/138‑1 (MQ=255)cTGTATGATTTCATCAGAACCGTTGCCGAAAATAAGTGATGTTTCGCTGACATTGAGGTGCTTACTGAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGcc > 1:265317/1‑139 (MQ=255) aTTTCATCAGAACGGTTGCCGAAAATAAGTGATGTTTCGCTGACATTGAGGTGCTTACTGAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTg > 8:14382/1‑139 (MQ=255) tttCATCAGAACCGTTGCCGAAAATAAGTGATGTTTCGCTGACATTGAGGTGCTTACTGAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTg > 5:226331/1‑138 (MQ=255) tttCATCAGAACCGTTGCCGAAAATAAGTGATGTTTCGCTGACATTGAGGTGCTTACTGAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGc < 3:138209/139‑1 (MQ=255) tttCATCAGAACCGTTGCCGAAAATAAGTGATGTTTCGCTGACATTGAGGTGCTTACTGAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGc < 6:199296/139‑1 (MQ=255) ttCATCAGAACCGTTGCCGAAAATAAGTGATGTTTCGCTGACATTGAGGTGCTTACTGAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTg > 1:289094/1‑137 (MQ=255) ttCATCAGAACCGTTGCCGAAAATAAGTGATGTTTCGCTGACATTGAGGTGCTTACTGAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTg > 7:373231/1‑137 (MQ=255) tcatcaGAACCGTTGCCGAAAATAAGTGATGTTTCGCTGACATTGAGGTGCTTACTGAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGc < 2:289094/137‑1 (MQ=255) cATCAGAACCGTTGCCGAAAATAAGTGATGTTTCGCTGACATTGAGGTGCTTACTGAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAGGCGCCTCTTTTGCGGc > 5:364041/1‑139 (MQ=255) cATCAGAACCGTTGCCGAAAATAAGTGATGTTTCGCTGACATTGAGGTGCTTACTGAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCTCCTCTTTTGCAga > 1:55406/1‑138 (MQ=255) tcagAACCGTTGCCGAAAATAAGTGATGTTTCGCTGACATTGAGGTGCTTACTGAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGcct < 7:406783/136‑3 (MQ=255) tcagAACCGTTGCCGAAAATAAGTGATGTTTCGCTGACATTGAGGTGCTTACTGAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGcct > 8:406783/4‑137 (MQ=255) agcGTTTCCGAATATAAGTGATGTTTCGGTGACATTGTGGTTCTTACTGTGCCTTGTCCGCAAAGCGGCGCTATACCCGTGGGGGTTAATGGATAGGTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGaa < 4:378977/137‑1 (MQ=255) aCCGTTGCCGAAAATAAGTGATGTTTCGCTGACATTGAGGTGCTTACTGAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGaa < 6:154942/139‑1 (MQ=255) ccGTTGCCGAAAATAAGTGATGTTTCGCTGACATTGAGGTGCTTACTGAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAAc < 6:420784/139‑1 (MQ=255) ccGTTGCCGAAAATAAGTGATGTTTCGCTGACATTGAGGTGCTTACTGAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAAc < 7:40947/139‑1 (MQ=255) ttgccGAAAATAAGTGATGTTTCGCTGACATTGAGGTGCTTACTGAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGaa < 7:317343/132‑1 (MQ=255) ttgccGAAAATAAGTGATGTTTCGCTGACATTGAGGTGCTTACTGAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGaa < 2:329330/132‑1 (MQ=255) ttgccGAAAATAAGTGATGTTTCGCTGACATTGAGGTGCTTACTGAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGaa > 1:329330/4‑135 (MQ=255) ttgccGAAAATAAGTGATGTTTCGCTGACATTGAGGTGCTTACTGAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGaa > 8:317343/4‑135 (MQ=255) ttgccGAAAATAAGTGATGTTTCGCTGACATTGAGGTGCTTACTGAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGc > 5:247609/4‑139 (MQ=255) ttgccGAAAATAAGTGATGTTTCGCTGACATTGAGGTGCTTACTGAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGc > 3:397174/4‑139 (MQ=255) ttgccGAAAATAAGTGATGTTTCGCTGAAATTGAGGTGCTTACTGAGCCTTGTCCGCAAAGAGGCGCTATACCCGTCCGGGTAAAGTGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGAAGCCTCTGAACAGc > 5:11799/4‑139 (MQ=255) ccGAAAATAAGTGATGTTTCGCTGACATTGAGGTGCTTACTGAGCCTTGTCCGC‑AAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGt < 8:32562/138‑1 (MQ=255) gAAAATAAGTGATGTTTCGCTGACATTGAGGTGCTTACTGAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTaa < 8:373231/139‑2 (MQ=255) aaTAAGTGATGTTTCGCTGACATTGAGGGGCTTACTGAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGa < 6:397697/139‑1 (MQ=255) gcTGACATTGAGGTGCTTACTGAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGaagca < 5:139654/138‑1 (MQ=255) gcTGACATTGAGGTGCTTACTGAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGaagca < 7:191075/138‑1 (MQ=255) tagaTTGAGGTGCTTACTTAGCCTTGTCCGCAAAGCGTCGCTATACAGGTCCGGGTAAAGTTCTAGCTTTTGAATCTAATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGaagcaag < 4:320110/135‑1 (MQ=255) ttGAGGTGCTTACTGAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTca < 2:265317/139‑1 (MQ=255) ttGAGGTGCTTACTGAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTca < 6:247609/139‑1 (MQ=255) gTGCTTACTGAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTCACAAc > 3:320110/1‑138 (MQ=255) cttaCTGAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTCACAACTTTa > 3:324658/4‑139 (MQ=255) cttaCTGAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTCACAACTTTa > 1:395185/4‑139 (MQ=255) aCTGAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGaagca > 1:60303/1‑121 (MQ=255) aCTGAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGaagca < 2:60303/121‑1 (MQ=255) cTGAGCCTTGTCCGCAAAGCGGCGCTATCCCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTCACAACTTTATcc < 6:123336/138‑1 (MQ=255) tGAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTca < 4:270654/126‑1 (MQ=255) tGAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTca > 3:270654/1‑126 (MQ=255) gAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTCACAACTTTATCCAAg > 1:1614/1‑139 (MQ=255) aGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTCACAACTTTCTCCAAGc > 7:142207/1‑139 (MQ=255) aGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTCACAACTTTATCCAAGc > 4:364516/1‑139 (MQ=255) cTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGaa > 4:254103/1‑87 (MQ=255) cTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGaa < 3:254103/87‑1 (MQ=255) cTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTCACAACt < 8:126389/126‑1 (MQ=255) cTTGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTCACAACt > 7:126389/1‑126 (MQ=255) tGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGCATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTCACAACTTTATCCAAGCCatat > 8:299129/1‑139 (MQ=255) tGTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTCACAACTTTATCCAAGCCatat > 6:204033/1‑139 (MQ=255) gTCCGCAAATCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAgcgc > 4:134676/1‑65 (MQ=255) gTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAgcgc < 3:134676/65‑1 (MQ=255) gTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGATGCAAGCTTCACAACTTTATCCAAGCCATAtt > 6:279042/1‑139 (MQ=255) gTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTCACAACTTTATCCAAGCCATAtt > 3:36498/1‑139 (MQ=255) gTCCGCAAAGCGGCGCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTCACAACTTTATCCAAGCCATAtt > 7:55446/1‑139 (MQ=255) gcggcgCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTCACAACTTTATCCAAGCCATATTCTGATTTCa < 2:395185/139‑1 (MQ=255) gcggcgCTATACCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTCACAACTTTATCCAAGCCATATTCTGATTTCa < 4:324658/139‑1 (MQ=255) taCCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTCACAACTTTATCCAAGCCATATTCTGATTTCACTGCTTCaa > 7:216567/1‑139 (MQ=255) aCCCGTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTCACAACTTTATCCAAGCCATATTCTGATTTCACTGCTTCAAt < 4:36498/139‑1 (MQ=255) gTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGc < 5:405436/51‑1 (MQ=255) gTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGc > 6:405436/1‑51 (MQ=255) gTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGcct < 2:162121/56‑3 (MQ=255) gTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGcct > 1:162121/1‑54 (MQ=255) gTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGACGCAAGCTTCACAACTTTATCCAAGCCATATTCTGCTTTCACTGCTTCAATCGGc > 4:17299/1‑139 (MQ=255) gTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCATGCTTCACAACTTTATCCAAGCCATATTCTGATTTCACTGCTTCAATCGGc > 5:67610/1‑139 (MQ=255) gTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTca < 5:8317/95‑1 (MQ=255) gTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTca < 7:300186/95‑1 (MQ=255) gTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTca > 8:300186/1‑95 (MQ=255) gTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTca > 6:8317/1‑95 (MQ=255) gTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTCACTACTTTATCCAAGCAATATTCTGATTTCACTGCTTCAATCGGc > 7:162650/1‑139 (MQ=255) gTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTCACAACTTTATCCAAGCCATATTCTGATTTCa > 8:10130/1‑125 (MQ=255) gTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTCACAACTTTATCCAAGCCATATTCTGATTTCa < 7:10130/125‑1 (MQ=255) gTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTCACAACTTTATCCAAGCCATATTCTGATTTCACTGCTTCAATCGGc > 4:398055/1‑139 (MQ=255) gTCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTCACAACTTTATCCAAGCCATATTCTGATTTCACTGCTTCAATCGGc > 7:62841/1‑139 (MQ=255) gTCCGGGGAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTGCACACCTTTATCCACGCCAGATTCTGATGTCACTGCTTCAATCGGc > 1:254170/1‑139 (MQ=255) tCCGGGTAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTCACAACTTTATCCAAGCCATATTCTGATTTCACTGCTTCAATCGGCt > 3:375491/1‑139 (MQ=255) ggtAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCTGCCTCTGaa < 5:389597/54‑1 (MQ=255) ggtAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTCACAACTTTATCCAAGcc < 1:282943/104‑1 (MQ=255) ggtAAAGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTCACAACTTTATCCAAGcc > 2:282943/3‑106 (MQ=255) aaGGGCTAGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTCACAACTTTATCCAAGCCATATTCTGATTTCACTGCTTCAATCGGCTTTCCAgg < 6:226331/138‑1 (MQ=255) gctaGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTCACAACTTTATCCAAGCCATATTCTGATTTCACTGCTTCAATCGGCTTTCCAGGCTGAt < 4:375491/136‑1 (MQ=255) gctaGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTCACAACTTTATCCAAGCCATATTCTGATTTCACTGCTTCAATCGGCTTTCCAGGCTGAt < 7:39913/136‑1 (MQ=255) taGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTCACAACTTTATCCAAGCCATATTCTGATTTCCCTGCTTCAATCGGCTTTCCAGGCTGAt > 3:235366/2‑137 (MQ=255) aGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGc > 5:114804/1‑35 (MQ=255) aGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGc < 6:114804/35‑1 (MQ=255) aGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGaa > 1:150586/1‑45 (MQ=255) aGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGaa < 2:150586/45‑1 (MQ=255) aGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGaagca < 4:331814/72‑1 (MQ=255) aGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGaagca > 3:331814/1‑72 (MQ=255) aGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTca < 6:197888/79‑1 (MQ=255) aGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTca > 5:197888/1‑79 (MQ=255) aGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTCACAACTTTATCCAAGCCATATTCTGATTTCa < 7:397144/109‑1 (MQ=255) aGCTGTTGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTCACAACTTTATCCAAGCCATATTCTGATTTCa > 8:397144/1‑109 (MQ=255) ttGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTCACAACTTTATCCAAGCCATACTCTGATTTCACTGCTTCAATCGGCTTTCCAgg > 6:375405/1‑126 (MQ=255) ttGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTCACAACTTTATCCAAGCCATACTCTGATTTCACTGCTTCAATCGGCTTTCCAgg < 5:375405/126‑1 (MQ=255) tGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGt > 4:258337/1‑46 (MQ=255) tGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGt < 3:258337/46‑1 (MQ=255) tGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTCACAACTTTATCCAAGCCATATTCTGATTTCACTGCTTCAATCg < 6:426596/115‑1 (MQ=255) tGAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTCACAACTTTATCCAAGCCATATTCTGATTTCACTGCTTCAATCg > 5:426596/1‑115 (MQ=255) gAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTCACAACTTTATCCAAGCCATATTCTGATTTCACTGCTTCAATCGGCTTTCCAGGCTGATAAGGCTTCAg > 8:380772/1‑139 (MQ=255) gAATCTCATGATGAAGCGCCTCTTTTGCAGCCTCTGAACAGCCGTAAGGATTCTCGTTTGAAGCAAGCTTCACAACTGTATCCAAGCCATAGTCTGATTTCACTGCTTCAATCGGCTTTCCAGGCTGATAAGGCTTCAg > 2:241919/1‑139 (MQ=255) | CTGAATGATTTCATCTGAACCGTTTCCGAAAATAAGTGATGTTTCACTGACATTGAGGTGCTCACTGAGCCTTGTCCGCAAAGCGGCGCTATACCCGTCCGGATAAAGCGCAAGCTGTTGAATCTCATGTTGAAGCGCCTCTTTTGCAGCTTCTGAACAGCCGTACGGATTTTCGTTTGAAGCAAGCTTCACAACTTTATCCAAGCCATATTCTGATTTCACTGCTTCAATCGGCTTTCCAGGCTGATAAGGCTTCAG > CP006881/2189074‑2189331 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |