BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP006881	2,189,758	T→C	N139S (AAC→AGC)	U712_10970 ←	Tryptophan synthase alpha chain

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP006881	2,189,758	0	T	C	100.0%	344.3 / NA	106	N139S (AAC→AGC)	U712_10970	Tryptophan synthase alpha chain
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (49/57); total (49/57)

Only 100 of 109 total aligned reads displayed.

GAATTGAACTCATTGCGGACACCGGTCACACCTAGAGAAGATACACAGTAGACGAAGCCCTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTTACCTCATGGTTTTTGCAATCCGCTTGAAGGCTGGCGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATGTGATTTTTCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAACACAGGATTATAATACGTA  >  CP006881/2189623‑2189892

gAATTGAACTCATTGCGGACACCGGTCACACCCAGAGAAGATACACAGTAGACGAACCCCTCGGCTTGTTCATTATTGGGTTTCAAACGGCTTTGGCTTGTCGGCGCTCCTAAAGCATTATACGTCTCCTCATGGcttg                                                                                                                                     >  2:416212/1‑138 (MQ=255)

gAATTGAACTCATTGCGGACACCGGTCACACCCAGAGAAGATACACAGTAGACGAACCCCTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGcttt                                                                                                                                     >  2:49695/1‑139 (MQ=255)

gAATTGAACTCATTGCGGACACCGGTCACACCCAGAGAAGATACACAGTAGACGAACCCCTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGcttt                                                                                                                                     >  3:280436/1‑139 (MQ=255)

      aaCTCATTGCGGACACCGGTCACACCCAGAGAAGATACACAGTAGACGAACCCCTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACatt                                                                                                                               >  6:126814/1‑137 (MQ=255)

      aaCTCATTGCGGACACCGGTCACACCCAGAGAAGATACACAGTACACGAACCCCTCTGCTTGTTCAATAATGGTTATCAAACGGCTTTCGCTTGTCGGCTCAACTAAAGAAATATACGTCACCTCATGTCTTTTACat                                                                                                                                >  7:228640/1‑137 (MQ=255)

       aCTCATTGCGGACACCGGTCACACCCAGAGAAGATACACAGTAGACGAACCCCTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTc                                                                                                                              <  5:364196/139‑1 (MQ=255)

        cTCATTGCGGACACCGGTCACCCCCAGAGAAGATACACAGTAGACGAACCCCTCGGCTTGTTCAATAATGGTTTACAAACGGCTATCGCATGTCGGCGCAACTAAAGAAATATACGTCACCTCATGCCTTTTACATTcc                                                                                                                             >  3:394411/1‑139 (MQ=255)

        cTCATTGCGGACACCGGTCACACCCAGAGAAGATACACAGTAGACGAACCCCTCGGCTTGTTCAATAATTGTTTTCAAACGGCTTTCGCTTGTCGGTGCAACTAAAGAAATATACGTCACCTCATGGCATTTACATTcc                                                                                                                             >  5:227986/1‑139 (MQ=255)

             tGCGGACACCGGTCACACCCAGAGAAGATACACAGTAGACGAACCCCTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTcatctt                                                                                                                         >  4:342461/1‑133 (MQ=255)

             tGCGGACACCGGTCACACCCAGAGAAGATACACAGTAGACGAACCCCTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCtt                                                                                                                         >  4:374980/1‑138 (MQ=255)

                    acCGGTCACACCCAGAGAAGATACACAGTAGACGAACCCCTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTg                                                                                                                 <  5:120515/139‑1 (MQ=255)

                    acCGGTCACACCCAGAGAAGATACACAGTAGACGAACCCCTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTg                                                                                                                 <  3:374980/139‑1 (MQ=255)

                         tCACACCCAGAGAAGATACACAGTAGACGAACCCCTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTgttgct                                                                                                            <  4:280436/139‑6 (MQ=255)

                          cacaCCCAGAGAAGATACACAGTAGACGAACCCCTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCtt                                                                                                           <  2:17270/139‑1 (MQ=255)

                             acCCAGAGAAGATACACAGTAGACGAACCCCTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTttct                                                                                                        >  4:419154/1‑139 (MQ=255)

                                  gagaAGATACACAGTAGACGAACCCCTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGCAGGCTGGTGCTTTCTTCTaa                                                                                                   >  1:330362/1‑139 (MQ=255)

                                   agaagaTACACAGTAGACGAACCCCTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATCAACCTCACCTCATGGCTTTTACATTCATCTTGAAGGGTGTTGCTTTCTTCTAAt                                                                                                  >  3:51700/1‑139 (MQ=255)

                                      agaTACACAGTAGACGAACCCCTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGc                                                                                               <  2:131987/139‑1 (MQ=255)

                                       gaTACACAGTAGACGAACCCCTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATgg                                                                                                >  2:268158/1‑137 (MQ=255)

                                       gaTACACAGTAGACGAACCCCTCGGCTTGTTCAATAATGGTTTTCAAACGGCATTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCAGGGCTTTTACATTACTCTTGAAGGCTGTTGCTTTCTTCTAATgg                                                                                                >  5:42311/1‑137 (MQ=255)

                                         tACACAGTAGACGAACCCCTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATgg                                                                                                >  2:328567/1‑135 (MQ=255)

                                           cacaGTAGACGAACCCCTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGAt                                                                                           <  8:228640/138‑1 (MQ=255)

                                           cacaGTAGACGAACCCCTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATc                                                                                          >  5:297120/1‑139 (MQ=255)

                                               gTAGACGAACCCCTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTACTCTTGAAGGCTGTTGCTTTCTTCTAATTGCAGATCCgg                                                                                       >  3:110052/1‑138 (MQ=255)

                                               gTAGACGAACCCCTCGGCTTGTTCAATAATGGTTTTCAAACGGCTATCGCTTGTCGGCGCAACTAAAGAAATATACGACACCTCAAGGCTTTTAGATTCCTCTTGAAGGCAGAATCTTACTTCAAATGGCACATCCgg                                                                                       >  7:215323/1‑138 (MQ=255)

                                                   aCGAACCCCTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTg                                                                                                                        >  1:208624/1‑101 (MQ=255)

                                                   aCGAACCCCTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTg                                                                                                                        <  2:208624/101‑1 (MQ=255)

                                                   aCGAACCCCTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAAc                                                                                    >  3:304560/1‑137 (MQ=255)

                                                        ccccTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGa                                                                             >  3:136060/2‑139 (MQ=255)

                                                        ccccTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGa                                                                             >  7:286620/2‑139 (MQ=255)

                                                        ccccTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGa                                                                             >  4:181476/2‑139 (MQ=255)

                                                        ccccTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGa                                                                             <  1:328567/138‑1 (MQ=255)

                                                        ccccTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGa                                                                             >  7:335828/2‑139 (MQ=255)

                                                        ccccTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCAGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGa                                                                             >  7:286488/2‑139 (MQ=255)

                                                        ccacTCGGCTTGTTCAATAAAGGTTTTCAAACGGCATTCGCTTGTCGGCGCAACTAAAGAATTTTACGTCACCTCATAGCTTTAAAATTCGTCTTGAAGGCTGTTGCTTTCTTCTAATGGCATATCCGGAACAAGCAGa                                                                             >  4:221691/4‑139 (MQ=255)

                                                         cccTCGGCTTGATCAATAATGGTTTTCAAACGTCTTTCGCTTGTCGTCGCAACTAAAGATATCTACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGTACAAGCAGAc                                                                            <  2:149230/139‑1 (MQ=255)

                                                          ccTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCTCCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGAcc                                                                           <  8:286620/139‑1 (MQ=255)

                                                          ccTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGAcc                                                                           <  1:401316/139‑1 (MQ=255)

                                                          ccTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGGTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGccc                                                                           >  5:341492/1‑139 (MQ=255)

                                                              ggCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCCGCGCAACTAAAGAAAAATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGt                                                                         <  1:416212/137‑1 (MQ=255)

                                                                   gTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAAtat                                                                   <  3:281816/138‑3 (MQ=255)

                                                                                 ttCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGt                                                     >  1:31911/1‑138 (MQ=255)

                                                                                 ttCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGt                                                     >  5:162234/1‑138 (MQ=255)

                                                                                  tCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTa                                                    <  1:114206/138‑1 (MQ=255)

                                                                                        ggCTATCGCTTGTCGGCGCAACTACAGAAATATACGTCACCTCCTGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGaa                                             <  8:251090/139‑1 (MQ=255)

                                                                                             tCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCgg                                                                                       >  5:443265/1‑92 (MQ=255)

                                                                                                    tCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGc                                                                                               >  7:394082/1‑77 (MQ=255)

                                                                                                    tCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGc                                                                                               <  8:394082/77‑1 (MQ=255)

                                                                                                    tCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGt                                        <  3:365873/132‑1 (MQ=255)

                                                                                                    tCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGt                                        >  4:365873/1‑132 (MQ=255)

                                                                                                    tCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCttt                                 >  1:231157/1‑139 (MQ=255)

                                                                                                        cgcAACTAAAGAACTATACGTGACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTc                             <  5:65256/139‑1 (MQ=255)

                                                                                                        cgcAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTc                             <  7:121040/139‑1 (MQ=255)

                                                                                                        cgcAACTAAAGAAATATACGTCACCACATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTc                             <  5:264699/139‑1 (MQ=255)

                                                                                                           aaCTAAAGTAATATACGTCACCTCATTGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTATAATGGCAGATCCGGAACAAGCAGACCGTCAATCTGATTTTCCCGCAGTTAAGCGAAAAAGTATTCTTTGTTCAAt                          <  6:42311/139‑1 (MQ=255)

                                                                                                           aaCTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAAt                          <  5:126814/139‑1 (MQ=255)

                                                                                                                 aGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTaa                     >  4:8583/1‑138 (MQ=255)

                                                                                                                  gAAATATACGTCACGTCATGGCTTTTACATTCCTCTTGTAGGCTGTTGCTTTGTTCTAATGGCAGATCCGGATCAAGCAGACCGTCAATATGATTTTGCCGCTGTAATGCGAAAAAGTATTCTTTGTTCAATTGTAaca                   <  5:129385/139‑1 (MQ=255)

                                                                                                                  gAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAaca                   <  6:193147/139‑1 (MQ=255)

                                                                                                                  gAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAaca                   <  4:304560/139‑1 (MQ=255)

                                                                                                                  gAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAaca                   <  5:233864/139‑1 (MQ=255)

                                                                                                                  gAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAaca                   <  1:268158/139‑1 (MQ=255)

                                                                                                                  gAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAaca                   <  4:150293/139‑1 (MQ=255)

                                                                                                                  gAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAaca                   <  4:136060/139‑1 (MQ=255)

                                                                                                                  gAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAaca                   <  4:110052/139‑1 (MQ=255)

                                                                                                                  gAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAaca                   <  6:33938/139‑1 (MQ=255)

                                                                                                                  gAAATATACGTCACCTCATGGCCTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTCAAGCGAAAAAGTATTCTTTGTTCAATTGTAaca                   <  6:76160/139‑1 (MQ=255)

                                                                                                                   aaaTATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAacac                  <  6:297120/139‑1 (MQ=255)

                                                                                                                    aaTATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAAcaca                 <  6:162234/139‑1 (MQ=255)

                                                                                                                    aaTATACGTCACCTCATGGCTTTTACAATCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAAcaca                 <  2:414863/139‑1 (MQ=255)

                                                                                                                     atatACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCaa                           >  5:29423/1‑128 (MQ=255)

                                                                                                                     atatACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCaa                           <  6:29423/128‑1 (MQ=255)

                                                                                                                     atatACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAACACAg                >  2:142995/1‑139 (MQ=255)

                                                                                                                     atatACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAACACAg                >  6:215620/1‑139 (MQ=255)

                                                                                                                      tataCGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAACACAg                >  8:60419/1‑138 (MQ=255)

                                                                                                                       ataCGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAaca                   <  6:270828/134‑1 (MQ=255)

                                                                                                                       ataCGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAaca                   >  5:270828/1‑134 (MQ=255)

                                                                                                                        taCGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAACACAGGa              <  3:391786/138‑1 (MQ=255)

                                                                                                                           gtcaCCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAACACAGGATtat          <  2:231157/136‑1 (MQ=255)

                                                                                                                             caCCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCt                                   <  2:354457/111‑1 (MQ=255)

                                                                                                                             caCCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCt                                   >  1:354457/2‑112 (MQ=255)

                                                                                                                             caCCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAaca                   >  5:330334/2‑128 (MQ=255)

                                                                                                                             caCCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAaca                   <  2:331240/127‑1 (MQ=255)

                                                                                                                             caCCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAaca                   <  6:330334/127‑1 (MQ=255)

                                                                                                                             caCCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAaca                   >  1:331240/2‑128 (MQ=255)

                                                                                                                             caCCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAaca                   >  1:337437/2‑128 (MQ=255)

                                                                                                                              aCCTCATTGCTTTTACATTCCTCATGAAGGCTGTTGCTTTCTTCTTAAGGCAGATCCGGAAGAAGCAGACCGTCAATATGAGTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAACACAGGATTataa        <  2:160186/138‑1 (MQ=255)

                                                                                                                              aCCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAaca                   >  7:268857/1‑127 (MQ=255)

                                                                                                                              aCCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAaca                   <  8:268857/127‑1 (MQ=255)

                                                                                                                              aCCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAACACAGGATTataat       <  8:286488/139‑1 (MQ=255)

                                                                                                                                cTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCgg                                                                                       <  7:396137/57‑1 (MQ=255)

                                                                                                                                cTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCgg                                                                                       >  8:396137/1‑57 (MQ=255)

                                                                                                                                cTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCgg                                                                                       >  8:401640/1‑57 (MQ=255)

                                                                                                                                cTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAAtt                         <  6:56706/119‑1 (MQ=255)

                                                                                                                                cTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAACACAGGa              <  7:412151/130‑1 (MQ=255)

                                                                                                                                cTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAACACAGGa              >  8:412151/1‑130 (MQ=255)

                                                                                                                                cTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAACACAGGATTATAATAc     >  3:324728/1‑139 (MQ=255)

                                                                                                                                cTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAACACAGGATTATAATAc     <  3:303512/139‑1 (MQ=255)

                                                                                                                                   aTGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAACACAGGATTATAATACGt   >  4:351788/1‑138 (MQ=255)

                                                                                                                                    tGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAACACAGGATTATAATACGTa  >  2:151216/1‑138 (MQ=255)

GAATTGAACTCATTGCGGACACCGGTCACACCTAGAGAAGATACACAGTAGACGAAGCCCTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTTACCTCATGGTTTTTGCAATCCGCTTGAAGGCTGGCGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATGTGATTTTTCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAACACAGGATTATAATACGTA  >  CP006881/2189623‑2189892

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`