BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP006881	2,189,763	G→A	C137C (TGC→TGT)	U712_10970 ←	Tryptophan synthase alpha chain

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP006881	2,189,763	0	G	A	100.0%	343.5 / NA	108	C137C (TGC→TGT)	U712_10970	Tryptophan synthase alpha chain
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (49/59); total (49/59)

Only 100 of 108 total aligned reads displayed.

AACTCATTGCGGACACCGGTCACACCTAGAGAAGATACACAGTAGACGAAGCCCTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTTACCTCATGGTTTTTGCAATCCGCTTGAAGGCTGGCGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATGTGATTTTTCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAACACAGGATTATAATACGTAAA  >  CP006881/2189629‑2189894

aaCTCATTGCGGACACCGGTCACACCCAGAGAAGATACACAGTAGACGAACCCCTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACatt                                                                                                                                 >  6:126814/1‑137 (MQ=255)

aaCTCATTGCGGACACCGGTCACACCCAGAGAAGATACACAGTACACGAACCCCTCTGCTTGTTCAATAATGGTTATCAAACGGCTTTCGCTTGTCGGCTCAACTAAAGAAATATACGTCACCTCATGTCTTTTACat                                                                                                                                  >  7:228640/1‑137 (MQ=255)

 aCTCATTGCGGACACCGGTCACACCCAGAGAAGATACACAGTAGACGAACCCCTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTc                                                                                                                                <  5:364196/139‑1 (MQ=255)

  cTCATTGCGGACACCGGTCACCCCCAGAGAAGATACACAGTAGACGAACCCCTCGGCTTGTTCAATAATGGTTTACAAACGGCTATCGCATGTCGGCGCAACTAAAGAAATATACGTCACCTCATGCCTTTTACATTcc                                                                                                                               >  3:394411/1‑139 (MQ=255)

  cTCATTGCGGACACCGGTCACACCCAGAGAAGATACACAGTAGACGAACCCCTCGGCTTGTTCAATAATTGTTTTCAAACGGCTTTCGCTTGTCGGTGCAACTAAAGAAATATACGTCACCTCATGGCATTTACATTcc                                                                                                                               >  5:227986/1‑139 (MQ=255)

       tGCGGACACCGGTCACACCCAGAGAAGATACACAGTAGACGAACCCCTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTcatctt                                                                                                                           >  4:342461/1‑133 (MQ=255)

       tGCGGACACCGGTCACACCCAGAGAAGATACACAGTAGACGAACCCCTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCtt                                                                                                                           >  4:374980/1‑138 (MQ=255)

              acCGGTCACACCCAGAGAAGATACACAGTAGACGAACCCCTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTg                                                                                                                   <  5:120515/139‑1 (MQ=255)

              acCGGTCACACCCAGAGAAGATACACAGTAGACGAACCCCTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTg                                                                                                                   <  3:374980/139‑1 (MQ=255)

                   tCACACCCAGAGAAGATACACAGTAGACGAACCCCTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTgttgct                                                                                                              <  4:280436/139‑6 (MQ=255)

                    cacaCCCAGAGAAGATACACAGTAGACGAACCCCTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCtt                                                                                                             <  2:17270/139‑1 (MQ=255)

                     acacCCAGAGAAGATACACAGTAGACGAACCCCTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCttt                                                                                                            <  1:421212/139‑1 (MQ=255)

                            gagaAGATACACAGTAGACGAACCCCTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGCAGGCTGGTGCTTTCTTCTaa                                                                                                     >  1:330362/1‑139 (MQ=255)

                                 gaTACACAGTAGACGAACCCCTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATgg                                                                                                  >  2:268158/1‑137 (MQ=255)

                                 gaTACACAGTAGACGAACCCCTCGGCTTGTTCAATAATGGTTTTCAAACGGCATTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCAGGGCTTTTACATTACTCTTGAAGGCTGTTGCTTTCTTCTAATgg                                                                                                  >  5:42311/1‑137 (MQ=255)

                                   tACACAGTAGACGAACCCCTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATgg                                                                                                  >  2:328567/1‑135 (MQ=255)

                                     cacaGTAGACGAACCCCTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGAt                                                                                             <  8:228640/138‑1 (MQ=255)

                                     cacaGTAGACGAACCCCTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATc                                                                                            >  5:297120/1‑139 (MQ=255)

                                         gTAGACGAACCCCTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTACTCTTGAAGGCTGTTGCTTTCTTCTAATTGCAGATCCgg                                                                                         >  3:110052/1‑138 (MQ=255)

                                         gTAGACGAACCCCTCGGCTTGTTCAATAATGGTTTTCAAACGGCTATCGCTTGTCGGCGCAACTAAAGAAATATACGACACCTCAAGGCTTTTAGATTCCTCTTGAAGGCAGAATCTTACTTCAAATGGCACATCCgg                                                                                         >  7:215323/1‑138 (MQ=255)

                                             aCGAACCCCTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTg                                                                                                                          >  1:208624/1‑101 (MQ=255)

                                             aCGAACCCCTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTg                                                                                                                          <  2:208624/101‑1 (MQ=255)

                                             aCGAACCCCTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAAc                                                                                      >  3:304560/1‑137 (MQ=255)

                                                  ccccTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGa                                                                               >  7:286620/2‑139 (MQ=255)

                                                  ccccTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGa                                                                               <  1:328567/138‑1 (MQ=255)

                                                  ccccTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGa                                                                               >  7:335828/2‑139 (MQ=255)

                                                  ccccTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGa                                                                               >  3:136060/2‑139 (MQ=255)

                                                  ccccTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGa                                                                               >  4:181476/2‑139 (MQ=255)

                                                  ccccTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCAGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGa                                                                               >  7:286488/2‑139 (MQ=255)

                                                  ccacTCGGCTTGTTCAATAAAGGTTTTCAAACGGCATTCGCTTGTCGGCGCAACTAAAGAATTTTACGTCACCTCATAGCTTTAAAATTCGTCTTGAAGGCTGTTGCTTTCTTCTAATGGCATATCCGGAACAAGCAGa                                                                               >  4:221691/4‑139 (MQ=255)

                                                   cccTCGGCTTGATCAATAATGGTTTTCAAACGTCTTTCGCTTGTCGTCGCAACTAAAGATATCTACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGTACAAGCAGAc                                                                              <  2:149230/139‑1 (MQ=255)

                                                    ccTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCTCCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGAcc                                                                             <  8:286620/139‑1 (MQ=255)

                                                    ccTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGAcc                                                                             <  1:401316/139‑1 (MQ=255)

                                                      tCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGt                                                                           >  4:281816/1‑139 (MQ=255)

                                                        ggCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCCGCGCAACTAAAGAAAAATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGt                                                                           <  1:416212/137‑1 (MQ=255)

                                                             gTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAAtat                                                                     <  3:281816/138‑3 (MQ=255)

                                                                           ttCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGt                                                       >  1:31911/1‑138 (MQ=255)

                                                                           ttCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGt                                                       >  5:162234/1‑138 (MQ=255)

                                                                            tCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTa                                                      <  1:114206/138‑1 (MQ=255)

                                                                                  ggCTATCGCTTGTCGGCGCAACTACAGAAATATACGTCACCTCCTGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGaa                                               <  8:251090/139‑1 (MQ=255)

                                                                                       tCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCgg                                                                                         <  6:443265/92‑1 (MQ=255)

                                                                                       tCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCgg                                                                                         >  5:443265/1‑92 (MQ=255)

                                                                                              tCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGc                                                                                                 >  7:394082/1‑77 (MQ=255)

                                                                                              tCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGc                                                                                                 <  8:394082/77‑1 (MQ=255)

                                                                                              tCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGt                                          <  3:365873/132‑1 (MQ=255)

                                                                                              tCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGt                                          >  4:365873/1‑132 (MQ=255)

                                                                                              tCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCttt                                   >  1:231157/1‑139 (MQ=255)

                                                                                                  cgcAACTAAAGAACTATACGTGACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTc                               <  5:65256/139‑1 (MQ=255)

                                                                                                  cgcAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTc                               <  7:121040/139‑1 (MQ=255)

                                                                                                  cgcAACTAAAGAAATATACGTCACCACATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTc                               <  5:264699/139‑1 (MQ=255)

                                                                                                     aaCTAAAGTAATATACGTCACCTCATTGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTATAATGGCAGATCCGGAACAAGCAGACCGTCAATCTGATTTTCCCGCAGTTAAGCGAAAAAGTATTCTTTGTTCAAt                            <  6:42311/139‑1 (MQ=255)

                                                                                                     aaCTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAAt                            <  5:126814/139‑1 (MQ=255)

                                                                                                           aGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTaa                       >  4:8583/1‑138 (MQ=255)

                                                                                                            gAAATATACGTCACGTCATGGCTTTTACATTCCTCTTGTAGGCTGTTGCTTTGTTCTAATGGCAGATCCGGATCAAGCAGACCGTCAATATGATTTTGCCGCTGTAATGCGAAAAAGTATTCTTTGTTCAATTGTAaca                     <  5:129385/139‑1 (MQ=255)

                                                                                                            gAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAaca                     <  6:33938/139‑1 (MQ=255)

                                                                                                            gAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAaca                     <  1:268158/139‑1 (MQ=255)

                                                                                                            gAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAaca                     <  6:193147/139‑1 (MQ=255)

                                                                                                            gAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAaca                     <  3:342461/139‑1 (MQ=255)

                                                                                                            gAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAaca                     <  4:110052/139‑1 (MQ=255)

                                                                                                            gAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAaca                     <  4:136060/139‑1 (MQ=255)

                                                                                                            gAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAaca                     <  4:150293/139‑1 (MQ=255)

                                                                                                            gAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAaca                     <  5:233864/139‑1 (MQ=255)

                                                                                                            gAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAaca                     <  5:227369/139‑1 (MQ=255)

                                                                                                            gAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAaca                     <  4:304560/139‑1 (MQ=255)

                                                                                                            gAAATATACGTCACCTCATGGCCTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTCAAGCGAAAAAGTATTCTTTGTTCAATTGTAaca                     <  6:76160/139‑1 (MQ=255)

                                                                                                             aaaTATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAacac                    <  6:297120/139‑1 (MQ=255)

                                                                                                              aaTATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAAcaca                   <  6:162234/139‑1 (MQ=255)

                                                                                                              aaTATACGTCACCTCATGGCTTTTACAATCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAAcaca                   <  2:414863/139‑1 (MQ=255)

                                                                                                               atatACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCaa                             >  5:29423/1‑128 (MQ=255)

                                                                                                               atatACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCaa                             <  6:29423/128‑1 (MQ=255)

                                                                                                               atatACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAACACAg                  >  2:142995/1‑139 (MQ=255)

                                                                                                               atatACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAACACAg                  >  6:215620/1‑139 (MQ=255)

                                                                                                                tataCGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAACACAg                  >  8:60419/1‑138 (MQ=255)

                                                                                                                 ataCGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAaca                     <  6:270828/134‑1 (MQ=255)

                                                                                                                 ataCGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAaca                     >  5:270828/1‑134 (MQ=255)

                                                                                                                  taCGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAACACAGGa                <  3:391786/138‑1 (MQ=255)

                                                                                                                     gtcaCCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAACACAGGATtat            <  2:231157/136‑1 (MQ=255)

                                                                                                                       caCCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCt                                     >  1:354457/2‑112 (MQ=255)

                                                                                                                       caCCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAaca                     >  5:330334/2‑128 (MQ=255)

                                                                                                                       caCCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAaca                     >  1:331240/2‑128 (MQ=255)

                                                                                                                       caCCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAaca                     <  2:337437/127‑1 (MQ=255)

                                                                                                                       caCCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAaca                     <  2:331240/127‑1 (MQ=255)

                                                                                                                       caCCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAaca                     >  1:337437/2‑128 (MQ=255)

                                                                                                                        aCCTCATTGCTTTTACATTCCTCATGAAGGCTGTTGCTTTCTTCTTAAGGCAGATCCGGAAGAAGCAGACCGTCAATATGAGTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAACACAGGATTataa          <  2:160186/138‑1 (MQ=255)

                                                                                                                        aCCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAaca                     <  8:268857/127‑1 (MQ=255)

                                                                                                                        aCCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAaca                     >  7:268857/1‑127 (MQ=255)

                                                                                                                        aCCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAACACAGGATTataat         <  8:286488/139‑1 (MQ=255)

                                                                                                                          cTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCgg                                                                                         >  8:396137/1‑57 (MQ=255)

                                                                                                                          cTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCgg                                                                                         <  7:401640/57‑1 (MQ=255)

                                                                                                                          cTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCgg                                                                                         >  8:401640/1‑57 (MQ=255)

                                                                                                                          cTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAAtt                           <  6:56706/119‑1 (MQ=255)

                                                                                                                          cTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAAtt                           >  5:56706/1‑119 (MQ=255)

                                                                                                                          cTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAACACAGGa                <  7:412151/130‑1 (MQ=255)

                                                                                                                          cTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAACACAGGa                >  8:412151/1‑130 (MQ=255)

                                                                                                                          cTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAACACAGGATTATAATAc       <  3:303512/139‑1 (MQ=255)

                                                                                                                          cTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAACACAGGATTATAATAc       >  3:324728/1‑139 (MQ=255)

                                                                                                                             aTGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAACACAGGATTATAATACGt     >  4:351788/1‑138 (MQ=255)

                                                                                                                              tGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAACACAGGATTATAATACGTa    >  2:151216/1‑138 (MQ=255)

                                                                                                                                gcttttACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAACACAGGATTATAATACGTaaa  <  2:31911/136‑1 (MQ=255)

                                                                                                                                gcttttACATTCCTCTTGAAGGATGTTGCTTTCTTCTAATGGCAGATACTGAACAAGCAGAACGTCAATTTGATTTTCCCGCAGTTAAGCGAAAAAGTATTCTTTGTTCAATTGTAACACAGGATTATAATACGTaaa  <  3:221691/136‑1 (MQ=255)

AACTCATTGCGGACACCGGTCACACCTAGAGAAGATACACAGTAGACGAAGCCCTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTTACCTCATGGTTTTTGCAATCCGCTTGAAGGCTGGCGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATGTGATTTTTCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAACACAGGATTATAATACGTAAA  >  CP006881/2189629‑2189894

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`