| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP006881 | 2,189,766 | A→T | D136E (GAT→GAA) | U712_10970 ← | Tryptophan synthase alpha chain |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 2,189,766 | 0 | A | T | 99.1% | 331.2 / NA | 106 | D136E (GAT→GAA) | U712_10970 | Tryptophan synthase alpha chain |
| Reads supporting (aligned to +/- strand): ref base A (0/1); new base T (47/58); total (47/59) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 106 total aligned reads displayed.
ACTCATTGCGGACACCGGTCACACCTAGAGAAGATACACAGTAGACGAAGCCCTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTTACCTCATGGTTTTTGCAATCCGCTTGAAGGCTGGCGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATGTGATTTTTCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAACACAGGATTATAATACGTAAA > CP006881/2189630‑2189894 | aCTCATTGCGGACACCGGTCACACCCAGAGAAGATACACAGTAGACGAACCCCTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTc < 5:364196/139‑1 (MQ=255) cTCATTGCGGACACCGGTCACCCCCAGAGAAGATACACAGTAGACGAACCCCTCGGCTTGTTCAATAATGGTTTACAAACGGCTATCGCATGTCGGCGCAACTAAAGAAATATACGTCACCTCATGCCTTTTACATTcc > 3:394411/1‑139 (MQ=255) cTCATTGCGGACACCGGTCACACCCAGAGAAGATACACAGTAGACGAACCCCTCGGCTTGTTCAATAATTGTTTTCAAACGGCTTTCGCTTGTCGGTGCAACTAAAGAAATATACGTCACCTCATGGCATTTACATTcc > 5:227986/1‑139 (MQ=255) tGCGGACACCGGTCACACCCAGAGAAGATACACAGTAGACGAACCCCTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTcatctt > 4:342461/1‑133 (MQ=255) acCGGTCACACCCAGAGAAGATACACAGTAGACGAACCCCTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTg < 3:374980/139‑1 (MQ=255) acCGGTCACACCCAGAGAAGATACACAGTAGACGAACCCCTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTg < 5:120515/139‑1 (MQ=255) tCACACCCAGAGAAGATACACAGTAGACGAACCCCTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTgttgct < 4:280436/139‑6 (MQ=255) cacaCCCAGAGAAGATACACAGTAGACGAACCCCTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCtt < 2:17270/139‑1 (MQ=255) acacCCAGAGAAGATACACAGTAGACGAACCCCTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCttt < 1:421212/139‑1 (MQ=255) acCCAGAGAAGATACACAGTAGACGAACCCCTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTttct > 4:419154/1‑139 (MQ=255) gagaAGATACACAGTAGACGAACCCCTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGCAGGCTGGTGCTTTCTTCTaa > 1:330362/1‑139 (MQ=255) agaagaTACACAGTAGACGAACCCCTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATCAACCTCACCTCATGGCTTTTACATTCATCTTGAAGGGTGTTGCTTTCTTCTAAt > 3:51700/1‑139 (MQ=255) agaTACACAGTAGACGAACCCCTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGc < 2:131987/139‑1 (MQ=255) gaTACACAGTAGACGAACCCCTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATgg > 2:268158/1‑137 (MQ=255) gaTACACAGTAGACGAACCCCTCGGCTTGTTCAATAATGGTTTTCAAACGGCATTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCAGGGCTTTTACATTACTCTTGAAGGCTGTTGCTTTCTTCTAATgg > 5:42311/1‑137 (MQ=255) tACACAGTAGACGAACCCCTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATgg > 2:328567/1‑135 (MQ=255) cacaGTAGACGAACCCCTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGAt < 8:228640/138‑1 (MQ=255) cacaGTAGACGAACCCCTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATc > 5:297120/1‑139 (MQ=255) gTAGACGAACCCCTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTACTCTTGAAGGCTGTTGCTTTCTTCTAATTGCAGATCCgg > 3:110052/1‑138 (MQ=255) gTAGACGAACCCCTCGGCTTGTTCAATAATGGTTTTCAAACGGCTATCGCTTGTCGGCGCAACTAAAGAAATATACGACACCTCAAGGCTTTTAGATTCCTCTTGAAGGCAGAATCTTACTTCAAATGGCACATCCgg > 7:215323/1‑138 (MQ=255) aCGAACCCCTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTg > 1:208624/1‑101 (MQ=255) aCGAACCCCTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTg < 2:208624/101‑1 (MQ=255) aCGAACCCCTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAAc > 3:304560/1‑137 (MQ=255) ccccTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGa < 1:328567/138‑1 (MQ=255) ccccTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGa > 7:286620/2‑139 (MQ=255) ccccTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGa > 7:335828/2‑139 (MQ=255) ccccTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGa > 4:181476/2‑139 (MQ=255) ccccTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGa > 3:136060/2‑139 (MQ=255) ccacTCGGCTTGTTCAATAAAGGTTTTCAAACGGCATTCGCTTGTCGGCGCAACTAAAGAATTTTACGTCACCTCATAGCTTTAAAATTCGTCTTGAAGGCTGTTGCTTTCTTCTAATGGCATATCCGGAACAAGCAGa > 4:221691/4‑139 (MQ=255) cccTCGGCTTGATCAATAATGGTTTTCAAACGTCTTTCGCTTGTCGTCGCAACTAAAGATATCTACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGTACAAGCAGAc < 2:149230/139‑1 (MQ=255) ccTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCTCCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGAcc < 8:286620/139‑1 (MQ=255) ccTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGAcc < 1:401316/139‑1 (MQ=255) ccTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGGTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGccc > 5:341492/1‑139 (MQ=255) tCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGt > 4:281816/1‑139 (MQ=255) ggCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCCGCGCAACTAAAGAAAAATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGt < 1:416212/137‑1 (MQ=255) gTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAAtat < 3:281816/138‑3 (MQ=255) ttCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGt > 5:162234/1‑138 (MQ=255) ttCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGt > 1:31911/1‑138 (MQ=255) tCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTa < 1:114206/138‑1 (MQ=255) ggCTATCGCTTGTCGGCGCAACTACAGAAATATACGTCACCTCCTGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGaa < 8:251090/139‑1 (MQ=255) tCGCTTGTCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCgg < 6:443265/92‑1 (MQ=255) tCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGc > 7:394082/1‑77 (MQ=255) tCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGc < 8:394082/77‑1 (MQ=255) tCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGt < 3:365873/132‑1 (MQ=255) tCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGt > 4:365873/1‑132 (MQ=255) tCGGCGCAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCttt > 1:231157/1‑139 (MQ=255) cgcAACTAAAGAACTATACGTGACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTc < 5:65256/139‑1 (MQ=255) cgcAACTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTc < 7:121040/139‑1 (MQ=255) cgcAACTAAAGAAATATACGTCACCACATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTc < 5:264699/139‑1 (MQ=255) aaCTAAAGTAATATACGTCACCTCATTGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTATAATGGCAGATCCGGAACAAGCAGACCGTCAATCTGATTTTCCCGCAGTTAAGCGAAAAAGTATTCTTTGTTCAAt < 6:42311/139‑1 (MQ=255) aaCTAAAGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAAt < 5:126814/139‑1 (MQ=255) aGAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTaa > 4:8583/1‑138 (MQ=255) gAAATATACGTCACGTCATGGCTTTTACATTCCTCTTGTAGGCTGTTGCTTTGTTCTAATGGCAGATCCGGATCAAGCAGACCGTCAATATGATTTTGCCGCTGTAATGCGAAAAAGTATTCTTTGTTCAATTGTAaca < 5:129385/139‑1 (MQ=255) gAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAaca < 5:233864/139‑1 (MQ=255) gAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAaca < 1:268158/139‑1 (MQ=255) gAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAaca < 6:193147/139‑1 (MQ=255) gAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAaca < 6:33938/139‑1 (MQ=255) gAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAaca < 4:304560/139‑1 (MQ=255) gAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAaca < 5:227369/139‑1 (MQ=255) gAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAaca < 4:110052/139‑1 (MQ=255) gAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAaca < 4:136060/139‑1 (MQ=255) gAAATATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAaca < 4:150293/139‑1 (MQ=255) gAAATATACGTCACCTCATGGCCTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTCAAGCGAAAAAGTATTCTTTGTTCAATTGTAaca < 6:76160/139‑1 (MQ=255) aaaTATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAacac < 6:297120/139‑1 (MQ=255) aaTATACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAAcaca < 6:162234/139‑1 (MQ=255) aaTATACGTCACCTCATGGCTTTTACAATCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAAcaca < 2:414863/139‑1 (MQ=255) atatACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCaa > 5:29423/1‑128 (MQ=255) atatACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCaa < 6:29423/128‑1 (MQ=255) atatACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAACACAg > 6:215620/1‑139 (MQ=255) atatACGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAACACAg > 2:142995/1‑139 (MQ=255) tataCGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAACACAg > 8:60419/1‑138 (MQ=255) ataCGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAaca > 5:270828/1‑134 (MQ=255) ataCGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAaca < 6:270828/134‑1 (MQ=255) taCGTCACCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAACACAGGa < 3:391786/138‑1 (MQ=255) gtcaCCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAACACAGGATtat < 2:231157/136‑1 (MQ=255) caCCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCt < 2:354457/111‑1 (MQ=255) caCCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCt > 1:354457/2‑112 (MQ=255) caCCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAaca > 1:331240/2‑128 (MQ=255) caCCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAaca > 1:337437/2‑128 (MQ=255) caCCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAaca < 6:330334/127‑1 (MQ=255) caCCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAaca > 5:330334/2‑128 (MQ=255) caCCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAaca < 2:331240/127‑1 (MQ=255) caCCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAaca < 2:337437/127‑1 (MQ=255) aCCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAaca > 7:268857/1‑127 (MQ=255) aCCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAaca < 8:268857/127‑1 (MQ=255) aCCTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAACACAGGATTataat < 8:286488/139‑1 (MQ=255) cTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCgg > 8:401640/1‑57 (MQ=255) cTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCgg > 8:396137/1‑57 (MQ=255) cTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCgg < 7:396137/57‑1 (MQ=255) cTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCgg < 7:401640/57‑1 (MQ=255) cTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAAtt > 5:56706/1‑119 (MQ=255) cTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAAtt < 6:56706/119‑1 (MQ=255) cTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAACACAGGa < 7:412151/130‑1 (MQ=255) cTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAACACAGGa > 8:412151/1‑130 (MQ=255) cTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAACACAGGATTATAATAc < 3:303512/139‑1 (MQ=255) cTCATGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAACACAGGATTATAATAc > 3:324728/1‑139 (MQ=255) aTGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAACACAGGATTATAATACGt > 4:351788/1‑138 (MQ=255) tGGCTTTTACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAACACAGGATTATAATACGTa > 2:151216/1‑138 (MQ=255) gcttttACATTCCTCTTGAAGGCTGTTGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATATGATTTTCCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAACACAGGATTATAATACGTaaa < 2:31911/136‑1 (MQ=255) gcttttACATTCCTCTTGAAGGATGTTGCTTTCTTCTAATGGCAGATACTGAACAAGCAGAACGTCAATTTGATTTTCCCGCAGTTAAGCGAAAAAGTATTCTTTGTTCAATTGTAACACAGGATTATAATACGTaaa < 3:221691/136‑1 (MQ=255) | ACTCATTGCGGACACCGGTCACACCTAGAGAAGATACACAGTAGACGAAGCCCTCGGCTTGTTCAATAATGGTTTTCAAACGGCTTTCGCTTGTCGGCGCAACTAAAGAAATATACGTTACCTCATGGTTTTTGCAATCCGCTTGAAGGCTGGCGCTTTCTTCTAATGGCAGATCCGGAACAAGCAGACCGTCAATGTGATTTTTCCGCAGTAAAGCGAAAAAGTATTCTTTGTTCAATTGTAACACAGGATTATAATACGTAAA > CP006881/2189630‑2189894 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |