| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP006881 | 2,190,352 | T→C | K339K (AAA→AAG) | U712_10975 ← | Tryptophan synthase beta chain |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 2,190,352 | 0 | T | C | 96.0% | 221.1 / ‑2.1 | 76 | K339K (AAA→AAG) | U712_10975 | Tryptophan synthase beta chain |
| Reads supporting (aligned to +/- strand): ref base T (1/2); new base C (29/43); total (30/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
ATCCTTATCTCCCCGTCCTGATAAACAGACGAGAATGGATTGATTGCGATCCATCTCTTTGGCGAGTTTGAATGCTTTTGCTAACGCATGGGCAGATTCGATTGCCGGCAAAATCCCCTCTTTTTCTGACAAGAGTTTTAATGCATCCACCGCTTCTTCATCTGTGATACTGTCATAAGTGACACGGCCGCTCTTATGCAAATATGCGTGCTCCGGACCGATTCCAGGATAGTCAAGTCCTGCTGAAATGGAGTAAGGCTCAATAAT > CP006881/2190217‑2190483 | aTCCTTGTCTCCCCGGCCTGATAAACAGACGAGAATGAGTTGACCGCGATCCATTCCTTTGGCGAGTTTGAATGCTTTCGCTAACGCATGGGCAGATTCGATTGCCGGCAAAATCCCCTCTTTTTCTGACAAAAGctt > 2:250980/1‑138 (MQ=255) ccttgcctcCCCGGCCTGATAAACAGACGAGAATGAGTTGACCGCGATCCATTCCTTTGGCGAGTTTGAATGCTTTCGCTAACGCATGGGCAGATTCGATTGCCGGCAAAATCCCCTCTTTTTCTGACAAAAGCTTTaa < 6:293531/133‑1 (MQ=255) ccTTGTATCCCCGGCCTGATAAACAGACGAGAATGAGTTGACCGCGATCCATTCCTTTGGCGAGTTTGAATGCTTTCGCTAACGCATGGGCAGATTCGATTGCCGGCAAAATCCCCTCTTTTTCTGACAAAAGCTTTaa < 4:10770/139‑1 (MQ=255) cTTGTCTCCCCGGCCTGATAAACAGACGAGAATGAGTTGACCGCGATCCATTCCTTTGGCGAGTTTGAATGCTTTCGCTAACGCATGGGCAGATTCGATTGCCGGCAAAATCCCCTCTTTTTCTGACAAAAGcttt > 2:398565/1‑136 (MQ=255) cTTGTCTCCCCGGCCTGATAAACAGACGAGAATGAGTTGACCGCGATCCATTCCTTTGGCGAGTTTGAATGCTTTCGCTAACGCATGGGCAGATTCGATTGCCGGCAAAATCCCCTCTTTTTCTGACAAAAGcttt < 1:398565/136‑1 (MQ=255) cTTGTCTCCCCGGCCTGATAAACAGACGAGAATGAGTTGACCGCGATCCATTCCTTTGGCGAGTTTGAATGCTTTCGCTAACGCATGGGCAGATTCGATTGCCGGCAAAATCCCCTCTTTTTCTGACAAAAGCTTTAAt < 4:249007/139‑1 (MQ=255) cTTGTCTCCCCGGCCTGATAAACAGACGAGAATGAGTTGACCGCGATCCATTCCTTTGGCGAGTTTGAATGCTTTCGCTAACGCATGGGCAGATTCGATTGCCGGCAAAATCCCCTCTTTTTCTGACAAAAGCTTTAAt > 5:128637/1‑139 (MQ=255) cTTGTCTCCCCGGCCTGATAAACAGACGAGAATGAGTTGACCGCGATCCATTCCTTTGGCGAGTTTGAATGCTTTCGCTAACGCATGGGCAGATTCGATTGCCGGCAAAATCCCCTCTTTTTCTGACAAAAGCTTTAAt > 1:261321/1‑139 (MQ=255) tgtctcCCCGGCCTGATAAACAGACGAGAATGAGTTGACCGCGATCCATTCCTTTGGCGAGTTTGAATGCTTTCGCTAACGCATGGGCAGATTCGATTGCCGGCAAAATCCCCTCTTTTTCTGACAAAAGCTTTAATg > 6:439466/3‑138 (MQ=255) tgtctcCCCGGCCTGATAAACAGACGAGAATGAGTTGACCGCGATCCATTCCTTTGGCGAGTTTGAATGCTTTCGCTAACGCATGGGCAGATTCGATTGCCGGCAAAATCCCCTCTTTTTCTGACAAAAGCTTTAATg > 7:384481/3‑138 (MQ=255) tgtctcCCCGGCCTGATAAACAGACGAGAATGAGTTGACCGCGATCCATTCCTTTGGCGAGTTTGAATGCTTTCGCTAACGCATGGGCAGATTCGATTGCCGGCAAAATCCCCTCTTTTTCTGACAAAAGCTTTAATg > 7:234767/3‑138 (MQ=255) ccccGGCCTGATAAACAGACGAGAATGAGTTGACCGCGATCCATTCCTTTGGCGAGTTTGAATGCTTTCGCTAACGCATGGGCAGATTCGATTGCCGGCAAAATCCCCTCTTTTTCTGACAAAAGCTTTAATGCATCCa > 7:129771/1‑139 (MQ=255) cccGGCCTGATAAACAGACGAGAATGAGTTGACCGCGATCCATTCCTTTTGCGAGTTTGAATGCTTTCGCTAACGCATGGACAGATTCGATTGCCGGCAAAATCCCCTCTTTTTCTGACAAAAGCTTTAATGCATCCAc < 3:288316/139‑1 (MQ=255) cccGGCCTGATAAACAGACGAGAATGAGTTGACCGCGATCCATTCCTTTGGCGAGTTTGAATGCTTTCGCTAACGCATGGGCAGATTCGATTGCCGGCAAAATCCCCTCTTTTTCTGACAAAAGCTTTAATGCATCCAc > 4:436588/1‑139 (MQ=255) ggccTGATAACCAGACGAGAATGAGTTGACCGCGATCCATTCCTTTGGCGAGTTTGAATGCTTTCGCTAACGCATGGGCAGATTCGATTGCCGGCAAAATCCCCTCTTTTTCTGACAAAAGCTTTAATGCATCCACCGc < 6:31334/137‑1 (MQ=255) ggccTGATAAACAGACGAGAATGAGTTGACCGCGATCCATTCCTTTGGCGAGTTTGAATGCTTTCGCTAACGCATGGGCAGATTCGATTGCCGGCAAAATCCCCTCTTTTTCTGACAAAAGCTTTAATGCATCCACCGc < 2:13439/137‑1 (MQ=255) aTAAACAGACGATAATGAGTTGACCGCGATCCATTCCTTTGGCGAGTTTGAATGCTTTCGCTAACGCATGGGCAGATTCGATTGCCGGCAAAATCCCCTCTTTTTCTGACAAAAGCTTTAATGCATCCACCGCttcttc < 3:191868/139‑1 (MQ=255) aTAAACAGACGAGAATGAGTTGACCGCGATCCATTCCTTTGGCGAGTTTGAATGCTTTCGCTAACGCATGGGCAGATTCGATTGCCGGCAAAATCCCCTCTTTTTCTGACAAAAGCTTTAATGCATCCACCGcttctt > 5:106567/1‑138 (MQ=255) aTAAACAGACGAGAATGAGTTGACCGCGATCCATTCCTTTGGCGAGTTTGAATGCTTTCGCTAACGCATGGGCAGATTCGATTGCCGGCAAAATCCCCTCTTTTTCTGACAAAAGCTTTAATGCATCCACCGCttcttc < 7:37063/139‑1 (MQ=255) aTAAACAGACGAGAATGAGTTGACCGCGATCCATTCCTTTGGCGAGTTTGAATGCTTTCGCTAACGCATGGGCAGATTCGATTGCCGGCAAAATCCCCTCTTTTTCTGACAAAAGCTTTAATGCATCCACCGCttcttc < 2:12718/139‑1 (MQ=255) aTAAACAGACGAGAATGAGTTGACCGCGATCCATTCCTTTGGCGAGTTTGAATGCTTTCGCTAACGCATGGGCAGATTCGATTGCCGGCAAAATCCCCTCTTTTTCTGACAAAAGCTTTAATGCATCCACCGCttcttc < 1:250980/139‑1 (MQ=255) aTAAACAGACGAGAATGAGTTGACCGCGATCCATTCCTTTGGCGAGTTTGAATGCTTTCGCTAACGCATGGGCAGATTCGATTGCCGGCAAAATCCCCTCTTTTTCTGACAAAAGCTTTAATGCATCCACCGCttcttc < 8:129771/139‑1 (MQ=255) tAAACAGACGAGAATGAGTTGACCGCGATCCATTCCTTTGGCGAGTTTGAATGCTTTCGCTAACGCATGGGCAGATTCGATTGCCGGCAAAATCCCCTCTTTTTCTGACAAAAGCTTTAATGCATCCACCGCttcttc < 8:234767/138‑1 (MQ=255) aaaCAGACGAGAATGAGTTGACCGCGATCCATTCCTTTGGCGAGTTTGAATGCTTTCGCTAACGCATGGGCAGATTCGATTGCCGGCAAAATCCCCTCTTTTTCTGACAAAAGCTTTAATGCATCCACCGCTTCTTCAt < 8:50439/139‑1 (MQ=255) caCAGACGAGAATGAGTTGACCGCGATCGATTCCTTTGGCGAGTTTGAATGCTTTCGCTAACGCATGGGCAGATTCGATTGCCGGCAAAATCCCCTCTTTTTCTGACAAAAGCTTTAATGCATCCACCGCTTCTTCAt < 4:433784/137‑1 (MQ=255) atcAGACGAGCATGTGTTGACCGCGATCCATTCCTTTGGCGAGTTTGAATGCTTTCGCTAACGCATGGGCAGATTCGATTGCCGGCAATATCCCCTCTTTTTCTGACAATAGGTTTAATGCATCCACCGCTTCTTCAt < 6:75282/136‑1 (MQ=255) aaCAGACGAGAATGAGTTGACCGCGATCCATTCCTTTGGCGAGTTTGAATGCTTTCGCTAACGCATGGGCAGATTCGATTGCCGGCAAAATCCCCTCTTTTTCTGACAAAAGCTTTAATGCATCCACCGCTTCTTCAt < 5:439466/138‑1 (MQ=255) aaCAGACGAGAATGAGTTGACCGCGATCCATTCCTTTGGCGAGTTTGAATGCTTTCGCTAACGCATGGGCAGATTCGATTGCCGGCAAAATCCCCTCTTTTTCTGACAAAAGCTTTAATGCATCCACCGCTTCTTCAt < 5:308555/138‑1 (MQ=255) cAGACGAGAATGAGTTGACCGCGATCCATTCCTTTGGCGAGTTTGAATGCTTTCGCTAACGCATGGGCAGATTCGATTGCCGGCAAAATCCCCTCTTTTTCTGACAAAAGCTTTAATGCATCCACCGCTTCTTCATcgg > 5:194427/1‑137 (MQ=255) agaatagaATGAGTTGACCGCGATCCATTCCTTAGGCGAGTTTGAATGCTTTCGCTAACGCATGGGCAGATTCGATTGCCGGCAAAATCCCCTCTTATTCTGACAAAAGCATTAATGCATCCACCGCATCTTCATCggt > 5:75282/6‑139 (MQ=255) aCGAGAATGAGTTGACCGCGATCCATTCCTTTGGCGAGTTTGAATGCTTTCGCTAACGCATGGGCAGATTCGATTGCCGGCAAAATCCCCTCTTTTTCTGACAAAAGCTTTAATGCATCCACCGCTTCTTCATCggtta > 1:430335/1‑137 (MQ=255) gagaATGAGTTGACCGCGATCCATTCCTTTGGCGAGTTTGAATGCTTTCGCTAACGCATGGGCAGATTCGATTGCCGGCAAAATCCCCTCTTTTTCTGACAAAAGCTTTAATTCATCCACCGCTTCTTCATCGGTtata < 3:436588/139‑1 (MQ=255) gagaATGAGTTGACCGCGATCCATTCCTTTGGCGAGTTTGAATGCTTTCGCTAACGCATGGGCAGATTCGATTGCCGGCAAAATCCCCTCTTTTTCTGACAAAAGCTTTAATGCATCCACCGCttcttc > 5:57995/1‑129 (MQ=255) gagaATGAGTTGACCGCGATCCATTCCTTTGGCGAGTTTGAATGCTTTCGCTAACGCATGGGCAGATTCGATTGCCGGCAAAATCCCCTCTTTTTCTGACAAAAGCTTTAATGCATCCACCGCttcttc < 6:57995/129‑1 (MQ=255) gagaATGAGTTGACCGCGATCCATTCCTTTGGCGAGTTTGAATGCTTTCGCTAACGCATGGGCAGATTCGATTGCCGGCAAAATCCCCTCTTTTTCTGACAAAAGCTTTAATGCATCCACCGCttcttc > 7:59884/1‑129 (MQ=255) gagaATGAGTTGACCGCGATCCATTCCTTTGGCGAGTTTGAATGCTTTCGCTAACGCATGGGCAGATTCGATTGCCGGCAAAATCCCCTCTTTTTCTGACAAAAGCTTTAATGCATCCACCGCttcttc < 8:59884/129‑1 (MQ=255) gagaATGAGTTGACCGCGATCCATTCCTTTGGCGAGTTTGAATGCTTTCGCTAACGCATGGGCAGATTCGATTGCCGGCAAAATCCCCTCTTTTTCTGACAAAAGCTTTAATGCATCCACCGCTTCTTCATCGGTtata < 5:358636/139‑1 (MQ=255) gagaATGAGTTGACCGCGATCCATTCCTTTGGCGAGTTTGAATGCTTTCGCTAACGCATGGGCAGATTCGATTGCCGGCAAAATCCCCTCTTTTTCTGACAAAAGCTTTAATGCATCCACCGCTTCTTCATCGGTtata < 2:430335/139‑1 (MQ=255) gagaATGAGTTGACCGCGATCCATTCCTTTGGCGAGTTTGAATGCTTTCGCTAACGCATGGGCAGATTCGATTGCCGGCAAAATCCCCTCTTTTTCTGACAAAAGCTTTAATGCATCCACCGCTTCTTCATCGGTtata < 3:847/139‑1 (MQ=255) gagaATGAGTTGACCGCGATCCATTCCTTTGGCGAGTTTGAATGCTTTCGCTAACGCATGGGCAGATTCGATTGCCGGCAAAATCCCCTCTTTTTCTGACAAAAGCTTTAATGCATCCACCGCTTCTTCATCGGTtata < 4:439402/139‑1 (MQ=255) gagaATGAGTTGACCGCGATCCATTCCTTTGGCGAGTTTGAATGCTTTCGCTAACGCATGGGCAGATTCGATTGCCGGCAAAATCCCCTCTTTTTCTGACAAAAGCTTTAATGCATCCACCGCTTCTTCATCGGTtata < 2:256668/139‑1 (MQ=255) gagaATGAGTTGACCGCGATCCATTCCTTTGGCGAGTTTGAATGCTTTCGCTAACGCATGGGCAGATTCGATTGCCGGCAAAATCCCCTCTTTTTCTGACAAAAGCTTTAATGCATCCACCGCTTCTTCATCGGTtata < 3:11168/139‑1 (MQ=255) gagaATGAGTTGACCGCGATCCATTCCTTTGGCGAGTTTGAATGCTTTCGCTAACGCATGGGCAGATTCGATTGCCGGCAAAATCCCCTCTTTTTCTGACAAAAGCTTTAATGCATCCACCGCTTCTTCATCGGTtata < 3:434367/139‑1 (MQ=255) gagaATGAGTTGACCGCGATCCATTCCTTTGGCGAGTTTGAATGCTTTCGCTAACGCATGGGCAGATTCGATTGCCGGCAAAATCCCCTCTTTTTCTGACAAAAGCTATACTGCATCCACCGCTTCTTCATcggatat > 4:847/1‑132 (MQ=255) accgCGATCCATTCCTTTGGCGAGTTTGAATGCTTTCGCTAACGCATGGGCAGATTCGATTGCCGGCAAAATCCCCTCTTTTTCTGACAAAAGCTTTAATGCATCCACCGCTTCTTCAt > 3:229669/4‑119 (MQ=255) accgCGATCCATTCCTTTGGCGAGTTTGAATGCTTTCGCTAACGCATGGGCAGATTCGATTGCCGGCAAAATCCCCTCTTTTTCTGACAAAAGCTTTAATGCATCCACCGCTTCTTCAt < 4:229669/116‑1 (MQ=255) accgCGATCCATTCCTTTGGCGAGTTTGAATGCTTTCGCTAACGCATGGGCAGATTCGATTGCCGGCAAAATCCCCTCTTTTTCTGACAAAAGCTTTAATGCATCCACCGCTTCTTCATCGGTTATACTGTCATaa > 1:12722/4‑136 (MQ=255) accgCGATCCATTCCTTTGGCGAGTTTGAATGCTTTCGCTAACGCATGGGCAGATTCGATTGCCGGCAAAATCCCCTCTTTTTCTGACAAAAGCTTTAATGAAACCACCGCTTCTTCATCGGGAATACTGTCATAAGt > 3:49478/4‑138 (MQ=255) aTCCATTCCTTTGGCGAGTTTGAATGCTTTCGCTAACGCATGGGCAGATTCGATTGCCGGCAAAATCCCCTCTTTTTCTGACAAAAGCTTTAATGCATCCACCGCTTCTTCATCGGTTATACTGTCATAAGTGACACgg > 5:269017/1‑139 (MQ=255) tCCATTCCTTTGGCGAGTTTTAATGCTTTCGATAACGAATGGGCAGATTCGATTGCCGTCAAAATCCCCTCTTTTTCTGACAAAAGCTTTAATGCAACCACCGCTTCTTCATCGGTTATACTGTAATAAGTGACACGGc < 6:269017/139‑1 (MQ=255) tcctTTGGCGAGTTTGAATGCTTTCGCTAACGCATGGGCAGATTCGATTGCCGGCAAAATCCCCTCTTTTTCTGACAAAAGCTTTAATGCATCCAc > 2:352953/3‑96 (MQ=255) tcctTTGGCGAGTTTGAATGCTTTCGCTAACGCATGGGCAGATTCGATTGCCGGCAAAATCCCCTCTTTTTCTGACAAAAGCTTTAATGCATCCAc < 1:352953/94‑1 (MQ=255) tGGCGAGTTTGAATGCTTTCGCTAACGCATGGGCAGATTCGATTGCCGGCAAAATCCCCTCTTTTTCTGACAAAAGCTTTAATGCATCCACCGCTTCTTCATCGGTTATACTGTCATAAGTGACACGGCCGCTTTTATg > 5:305967/1‑139 (MQ=255) ggCGAGTTTGAATGCTTTCGCTAACGCATGGGCAGATTCGATTGCCGGCAAAATCCCCTCTTTTTCTGAAAAAAGCTTTAATGCATCCACCGCTTCTTCATCGGTTATACTGTCATAAGTGACACGGCCGCTTTTATg < 2:40423/138‑1 (MQ=255) gCGAGTTTGAATGCTTTCGCTACCGCATGGGCAGATTCGATTGCCGGCAAAATCCCCTCTTTTTCTGCCAAAAGCTTTAATGCATCCACCGCTTCTTCATCGGTTATACTGTCATAAGTGACACGGCCGCTTTTATGCa < 4:132443/139‑1 (MQ=255) gCGAGTTTGAATGCTTTCGCTAACGCATGGGCAGATTCGATTGCCGGCAAAATCCCCTCTTTTTCTGACAAAAGCTTTAATGCATCCACCGCTTCTTCATCGGTTATACTGTCATAAGTGACACGGCCGCTTTTATGc > 1:306405/1‑138 (MQ=255) gCGAGGTTGAATGCGTTCGCTAACGCTTGGGCAGATGCGATTGCCGGCAAAATCCCCTCTTTTTCTGACAAAAGCTTTAATCCATCCACCGCAGCTTCATCGGTTCTACTGTCATAAGTGACACGGCCGCTTTTATGCa < 3:226745/139‑1 (MQ=255) gTTTGAATGCTTTTGCTAACGCATGGGCAGATTCGATTGCCGGCAAAATCCCCTCTTTTTCTGACAAGAGTTTTAATGCATCCACCGCTTCTTCATCTGTGATACTGTCATAAGTGACACGGCCGCTCTTATGCAAata > 8:122311/1‑139 (MQ=255) tttGAATGCTTTCGCTAACGCATGGGCAGATTCGATTGCCGGCAAAATCCCCTCTTTTTCTGACAAAAGCTTTAATGCATCCACCGCTTCTTCATCGGTtata < 5:29430/103‑1 (MQ=255) tttGAATGCTTTCGCTAACGCATGGGCAGATTCGATTGCCGGCAAAATCCCCTCTTTTTCTGACAAAAGCTTTAATGCATCCACCGCTTCTTCATCGGTtata > 6:29430/1‑103 (MQ=255) tttGAATGCTTTCGCTAACGCATGGGCAGATTCGATTGCCGGCAAAATCCCCTCTTTTTCTGACAAAAGCTTTAATGCATCCACCGCTTCTTCATCGGTTATACTGTCATAAGTGACACGGCCGCTTTTTTGCAAaaat > 1:140144/1‑139 (MQ=255) tttGAATGCTTTCGCTAACGCATGGGCAGATTCGATTGCCGGCAAAATCCCCTCTTTTTCTGACAAAAGCTTTAATGCATCCACCGCTTCTTCATCGGTTATACTGTCATAAGTGACACGGCCGCTTTTATTGAAataa > 6:269143/1‑138 (MQ=255) aTGCTTTCGCTAACGCATGGGCAGATTCGATTGCCGGCAAAATCCCCTCTTTTTCTGACAAAAGCTTTAATGCATCCACCGCTTCTTCATCGGTTATACTGTCATAAGTGACACGGCCGCTTTTATTCAAATATGCATg > 7:274911/1‑139 (MQ=255) gCATGGGCAGATTCGATTGCCGGCAAAATCCCCTCTTTTTCTGACAAGAGTTTTAATGCATCCACCGCTTCTTCATCTGTGATACTGTCATAAGTGACACGGCCGCTCTTATGCAAATATGCGTGCTCCGGACCGATTc < 7:122311/139‑1 (MQ=255) gggCAGATTCGATTGCCGGCAAAATCCCCTCTTTTTCTGACAAAAGCTTTAATGCATCCACCGCTTCTTCATCTGTTATACTGTCATAAGTGACACGGCCGCTTTTATGCAAATATTCATTGTCCGGACCGATTCGAgg > 3:280094/1‑139 (MQ=255) gggCAGATTCGATTGCCGGCAAAATCCCCTCTTTTTCTGACAAAAGCTTTAATGCATCCACCGCTTCTTCATCGGTTATACTGTCATAAGTGACACGGCCGCTTTTATGCAAATAATGAAGCGCCGGACCGATTCCAg > 5:146348/1‑138 (MQ=255) aTTCGATTGCCGGCAAAATCCCCTCTTTTTCTGACAAAAGCTTTAAt < 4:190045/47‑1 (MQ=255) aTTCGATTGCCGGCAAAATCCCCTCTTTTTCTGACAAAAGCTTTAAt > 3:190045/1‑47 (MQ=255) gATTGCCGGCAAAATCCCCTCTTTTTCTGACAAAAGCTTTAATGCATCCACCGCTTCTTCATCGGTTATACTGTCATAAGTGACACGGCCGCTTTTATGCAAATATGCATGCTCCGGACCGATTCCAGGATAGTCGAga < 5:167694/139‑2 (MQ=255) ggcGGCAAAATCGCGTCTTTTTCTGACATAAGCTTTAATGAATCAACCGCTTCTTCATCGGTTATAGTGTAATAAGTGACACGGCCGCTTTTATGCAAATATGCATGCTCCGGACCGATTCCAGGATAGTCGAGAcc < 1:205436/135‑1 (MQ=255) ccgcaaaaaGCCCCTCTTTTTCTGAAAAATGTTTTATAGCATCCCCCGGTTCTTCATCGGTTTTACTGTCATAAGTCACACGGCCGCTTTTATGCAAATATGCATGCTCCGGACCGATTCCAGGATAGTCGAGACcggc < 5:52761/134‑1 (MQ=255) ccGGCAAAATCCCCTCTTTTTCTGACAAAAGCTTTAATGCATCCACCGCTTCTTCATCGGTTATACTGTCATAAGTGACACGGCCGCTTTTATGCAAATATGCATGCTCCGGACCGATTCCAGGATAGTCGAGAccgg < 3:169507/138‑3 (MQ=255) ggCAAAATCCCCTCTTTTTCTGACAACAGCTTTAATCCATCCACCGCTTCTTCATCGGTAATACTGTCATCAGTGACACGGCCGCTTTTATGCAAATATGCATGCTCCGGACCGATTCCAGGATAGTCGAGACcggctg < 8:57178/139‑1 (MQ=255) ggCAAAATCCCCTCTTTTTCTGACAAAAGCTTTAATGCATCCACCGCTTCTTCATCGGTTATACTGTCATAAGTGACACGGCCGCTTTTATGCAAATATGCATGCTCCGGACCGATTCCAGGATAGTCGAGACcggctg < 2:306405/139‑1 (MQ=255) aaaaTCCCCTCTTTTTCTTACAAATCCTTTAATGCAACCCCCGCTTCTTCATGGTTTATACTGTCATACGTGCCACGGCCGCTTTTATGCAAATATGCATGCTCCGGACCGATTCCAGGATAGTCGAGACCGGCTGaaa < 5:269143/139‑1 (MQ=255) aaaaTCCCCTCTTTTTCTGACAAAAGCTTTAATGCATCCACCGCTTCTTCATCGGTTATACTGTCATAAGTGACACGGCCGCTTTTATGCAAATATGCATGCTCCGGACCGATTCCAGGATAGTCGAGACCGGCTGaaa < 2:12722/139‑1 (MQ=255) ccTCTTTTTCTGACAAAACCTTTAATGCATCCACCGCTTCTTCATCGGTTATACTGTCATAAGTGACACGGCCGCTTTTATGCAAATATGCATGCTCCGGACCGATTCCAGGATAGTCGAGACCGGCTGAAATAGAGTa < 3:210219/139‑1 (MQ=255) ccTCTTTATCTCACAAAAGCTTTATTGCCCCCACAGCTTATCCTTCGGTTAACCGGCCAAAAGTCACACGGCCGCTTTTATGCAAATATGCATGCTCCGGACCGATTCCAGGATAGTCGAGACCGGCTGAAATAGAGTa < 4:99989/139‑1 (MQ=255) aCAAAAGCTTTAATGCATCCACCGCTTCTTCATCGGTTATACTGTCATAAGTGACACGGCCGCTTTTATGCAAATATGCATGCTCCGGACCGATTCCAGGATAGCCGAGACCGGCTGAAATAGAGTAGGGCTCaataat > 3:218900/1‑139 (MQ=255) | ATCCTTATCTCCCCGTCCTGATAAACAGACGAGAATGGATTGATTGCGATCCATCTCTTTGGCGAGTTTGAATGCTTTTGCTAACGCATGGGCAGATTCGATTGCCGGCAAAATCCCCTCTTTTTCTGACAAGAGTTTTAATGCATCCACCGCTTCTTCATCTGTGATACTGTCATAAGTGACACGGCCGCTCTTATGCAAATATGCGTGCTCCGGACCGATTCCAGGATAGTCAAGTCCTGCTGAAATGGAGTAAGGCTCAATAAT > CP006881/2190217‑2190483 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |