| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP006881 | 2,193,214 | C→T | L183L (TTG→TTA) | U712_10990 ← | Anthranilate phosphoribosyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 2,193,214 | 0 | C | T | 98.8% | 268.6 / ‑4.5 | 86 | L183L (TTG→TTA) | U712_10990 | Anthranilate phosphoribosyltransferase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (44/41); minor base A (1/0); total (45/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.31e-01 | |||||||||||
ATTGAAAGCTCATCTAAACCGTCACGGCTTGATACGAACATGACGTGCTTCGGCTGAAACGTCTCCAGTGCGCTTGCCATCAATCCAGCTTTTTCAGCGGAATAGACCCCAATCACCTGGCGCTTCGCCTGCAAGGGATTGCTAAGCGGTCCGAGCAAATTAAATACTGTTCTGAAACCCAGTTCTTTTCTTGTACCCGCTACATGTTTCATAGACGAATGATAGAGCGGTGCAAAAAGAAATCCCATGTTGTTTGCTTCAATGC > CP006881/2193083‑2193347 | aTTGAAAGCTCATCTAAACCGTCACGGCTTGATACAAACATAACGTGCTTCGGCTGAAACGTCTCCAGTGCGCTTGCCATCAGTCCAGCTTTTTCAACAGAATAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGa < 7:72337/138‑1 (MQ=255)aTTGAAAGCTCATCTAAACCGTCACGGCTTGATACAAACATAACGTGCTTCGGCTGAAACGTCTCCAGTGCGCTTGCCATCAGTCCAGCTTTTTCAACAGAATAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGa < 7:361476/138‑1 (MQ=255) gAAAGCTCATCTAAACCGTCACGGCTTGATACAAACATAACGTGCTTCGGCTGAAACGTCTCCAGTGCGCTTGCCATCCGTCCAGCTTTTTCAACAGAATAGACCCCACTCACCTGACGCTTCGCCTGTAAAGGATTGc > 5:76534/1‑139 (MQ=255) gAAAGCTCATCTAAACCGTCACGGCTTGATACAAACATAACGTGCTTCGGCTGAAACGTCTCCAGTGCGCTTGCCATCAGTCCAGCTTTTTCAACAGAATAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTg < 1:250433/138‑1 (MQ=255) gAAAGCTCATCTAAACCGTCACGGCTTGATACAAACATAACGTGCTTCGGCTGAAACGTCTCCAGTGCGCTTGCCATCAGTCCAGCTTTTTCAACAGAATAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGc > 3:164298/1‑139 (MQ=255) gAAAGCTCATCTAAACCGTCACGGCTTGATACAAACATAACGTGCTTCGGCTGAAACGTCTCCAGTGCGCTTGCCATCAGTCCAGCTTTTTCAACAGAATAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGc > 7:167798/1‑139 (MQ=255) gAAAGCTCATCTAAACCGTCACGGCTTGATACAAACATAACGTGCTTCGGCTGAAACGTCTCCAGTGCGCTTGCCATCAGTCCAGCTTTTTCAACAGAATAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGc > 5:83015/1‑139 (MQ=255) gAAAGCTCATCTAAACCGTCACGCCTTGATACAAACATAACGTGCTTCGGCTGAAACGTCTCCAGTGCCCATGCCAACAGTCCAGCTTATTCATCAGAATAGACCCCAATCAACAGACGCTACGCCTGTAAaggcagtc > 4:120187/1‑134 (MQ=255) aGCTCATCTAAACCGTCACGGCTTGATACAAACATAACGTGCTTCGGCTGAAACGTCTCCAGTGCGCTTGCCATCAGTCCAGCTTTTTCAACAGAATAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCtga < 7:187155/139‑3 (MQ=255) aGCTCATCTAAACCGTCACGGCTTGATACAAACATAACGTGCTTCGGCTGAAACGTCTCCAGTGCGCTTGCCATCAGTCCAGCTTTTTCAACAGAATAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCtga < 7:266574/139‑3 (MQ=255) gCTCATCTAAACCGTCACGGCTTGATACAAACATAACGTGCTTCGGCTGAAACGTCTCCAGTGCGCTTGCCATCAGTCCAGCTTTTTCAACAGAATAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAg < 6:205009/139‑1 (MQ=255) aTCTAAACCGTCACGGCTTGATACAAACATAACGTGCTTCGGCTGAAACGTCTCCAGTGCGCTTGCCATCAGTCCAGCTTTTTCAACAGAATAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCggc > 8:302108/1‑138 (MQ=255) cccGTCACGGCTTGATACAAACCTAACGTGCTTCGGCGGAAACGTCTCCAGTGCGCTTGCCATCAGTCCAGCTGTTTCAACAGACTAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGc < 8:90330/138‑1 (MQ=255) aCCGTCACGGCTTGATACAAACATAACGTGCTTCGGCTGAAACGTCTCCAGTGCGCTTGCCATCAGTCCAGCTTTTTCAACAGAATAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGc < 7:302108/139‑1 (MQ=255) aCCGTCACGGCTTGATACAAACATAACGTGCTTCGGCTGAAACGTCTCCAGTGCGCTTGCCATCAGTCCAGCTTTTTCAACAGAATAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGc < 7:355939/139‑1 (MQ=255) aCCGTCACGGCTTGATACAAACATAACGTGCTTCGGCTGAAACGTCTCCAGTGCGCTTGCCATCAGTCCAGCTTTTTCAACAGAATAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGc < 1:72516/139‑1 (MQ=255) aCCGTCACGGCTTGATACAAACATAACGTGCTTCGGCTGAAACGTCTCCAGTGCGCTTGCCATCAGTCCAGCTTTTTCAACAGAATAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGc < 3:374796/139‑1 (MQ=255) tCACGGCTTGATACAAACATAACGTGCTTCGGCTGAAACGTCTCCAGTGCGCTTGCCATCAGTCCAGCTTTTTCAACAGAATAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCa < 1:401683/136‑1 (MQ=255) tCACGGCTTGATACAAACATAACGTGCTTCGGCTGAAACGTCTCCAGTGCGCTTGCCATCAGTCCAGCTTTTTCAACAGAATAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCa > 2:401683/1‑136 (MQ=255) tCACGGCTTGATACAAACATAACGTGCTTCGGCTGAAACGTCTCCAGTGCGCTTGCCATCAGTCCAGCTTTTTCAACAGAATAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGAt > 3:221189/1‑139 (MQ=255) tCACGGCTTGATACAAACATAACGTGCTTCGGCTGAAACGTCTCCAGTGCGCTTGCCATCAGTCCAGCTTTTTCAACAGAATAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGAt > 4:252596/1‑139 (MQ=255) tCACGGCTTGATACAAACATAACGTGCTTCGGCTGAAACGTCTCCAGTGCGCTTGCCATCAGTCCAGCTTTTTCAACAGAATAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGAt > 4:395511/1‑139 (MQ=255) tCACGGCTTGATACAAACATAACGTGCTTCGGCTGAAACGTCTCCAGTGCGCTTGCCATCAGTCCAGCTTTTTCAACAGAATAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGAt > 6:308652/1‑139 (MQ=255) cACGGCTTGATACAAACATAACGTGCTTCGGCTGAAACGTCTCCAGTGCGCTTGCCATCAGTCCAGCTTTTTCAACAGAATAGACCCCAATCACCTGACGCTTCGCCTGTaaag > 6:401379/1‑112 (MQ=255) cACGGCTTGATACAAACATAACGTGCTTCGGCTGAAACGTCTCCAGTGCGCTTGCCATCAGTCCAGCTTTTTCAACAGAATAGACCCCAATCACCTGACGCTTCGCCTGTaaag < 5:401379/114‑3 (MQ=255) cTTGATACAAACATAACGTGCTTCGGCTGAAACGTCTCCAGTGCGCTTGCCATCAGTCCAGCTTTTTCAACAGAATAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATa < 6:184300/139‑1 (MQ=255) gATACAAACATAACGTGCTTCGGCTGAAACGTCTCCAGTGCGCTTGCCATCAGTCCAGCTTTTTCAACAGAATAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGAGTAAATAc < 5:189611/137‑1 (MQ=255) aCATAACGTGCTTCGGCTGAAACGTCTCCAGTGCGCTTGCCATCAGTCCAGCTTTTTCAACAGAATAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGcccaa > 7:357665/1‑115 (MQ=255) aCATAACGTGCTTCGGCTGAAACGTCTCCAGTGCGCTTGCCATCAGTCCAGCTTTTTCAACAGAATAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGcccaa < 8:357665/117‑3 (MQ=255) aCATAACGTGCTTCGGCTGAAACGTCTCCAGTGCGCTTGCCATCAGTCCAGCTTTTTCAACAGAATAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGa > 4:227208/1‑138 (MQ=255) aCATAACGTGCTTCGGCTGAAACGTCTCCAGTGCGCTTGCCATCAGTCCAGCTTTTTCAACAGAATAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTGCTGa > 7:384687/1‑138 (MQ=255) aaCGTGCTTCGGCTGAAACTTCTCCAGTGAGCTTGCCATCAGTCCAGCTTTTTCAACACAATAGACCCCAATCACCTGACGCTACGCCAGTAAAGTATAGCTGAGCGGCCCAAGCAGATTAAAAACCATACTGAAAcc > 2:388993/2‑138 (MQ=255) cGTGCTTCGGCTGAAACGTCTCCAGTGCGCTTGCCATCAGTCCAGCTTTTTCAACAGAATAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAg < 3:252596/139‑1 (MQ=255) gCTTCGGCTGAAACGTCTCCAGTGCGCTTGCCATCAGTCCAGCTTTTTCAACAGAATAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGctc < 4:221189/139‑1 (MQ=255) gCTTCGGCTGAAACGTCTCCAGTGCGCTTGCCATCAGTCCAGCTTTTTCAACAGAATAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGctc < 4:368308/139‑1 (MQ=255) cTTCGGCTGAAACGTCTCCAGTGCGCTTGCCATCAGTCCAGCTTTTTCAACAGAATAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGctct > 1:181402/1‑139 (MQ=255) cTTCGGCTGAAACGTCTCCAGTGCGCTTGCCATCAGTCCAGCTTTTTCAACAGAATAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGctc < 3:395511/138‑1 (MQ=255) cTTCGGCTGAAACGTCTCCAGTGCGCTTGCCATCAGTCCAGCTTTTTCAACAGAATAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGACAAAGCAGATTAAATACCGTTCTGAAACCTAGctct > 3:158274/1‑139 (MQ=255) cTTCGGCTGAAACGTCTCCAGTGCGCTTGCCAACAGTCCAGCTTTTTCAACAGAATAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGctct > 5:344634/1‑139 (MQ=255) tCGGCTGAAACGTCTCCAGTGCGCTTGCCATCAGTCCAGCTTTTTCAACAGAATAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGctcttt > 1:54606/1‑139 (MQ=255) aaCGTCTCCAGTGCGCTTGCCATCAGTCCAGCTTTTTCAACAGAATAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTAc < 6:92908/139‑1 (MQ=255) ctcCAGTGCGCTTGCCATCAGTCCAGCTTTTTCAACAGAATAGACCCCAATCACCTGACGCTTCGCCTGAAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGc > 7:137224/1‑138 (MQ=255) tGCGCTTGCCATCAGTCCAGCTTTTTCAACAGAATAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATATCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGt > 1:67890/1‑139 (MQ=255) cgcTTGCCATCAGTCCAGCTTTTTCAACAGAATAGACCCCAATCACCTGACGCTTCGCCTGTaaag > 1:374810/1‑64 (MQ=255) cgcTTGCCATCAGTCCAGCTTTTTCAACAGAATAGACCCCAATCACCTGACGCTTCGCCTGTaaag < 2:374810/66‑3 (MQ=255) cgcTTGCCATCAGTCCAGCTTTTTCAACAGAATAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAACCCTCCCTCTTGTCTAGTACCTCCTCCATggat > 6:298403/1‑136 (MQ=255) gcTTGCCATCAGTCCAGCTTTTTCAACAGAATAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATa > 7:54201/1‑95 (MQ=255) gcTTGCCATCAGTCCAGCTTTTTCAACAGAATAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATa < 8:54201/95‑1 (MQ=255) cTTGCCATCAGTCCAGCTTTTTCAACAGAATAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCa > 5:379140/1‑139 (MQ=255) cTTGCCATCAGTCCAGCTTTTTCAACAGAATAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCa < 4:183843/139‑1 (MQ=255) ttGCCATCAGTCCAGCTTTTTCAACAGAATAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCa > 7:281802/1‑138 (MQ=255) ttGCCATCAGTCCAGCTTTTTCAACAGAATAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCa > 8:229462/1‑138 (MQ=255) ccATCAGTCCAGCTTTTTCAACAGAATAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATTTTTCATAg < 4:158274/138‑1 (MQ=255) ccATCAGTCCAGCTTTTTCAACAGAATAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAg < 8:384687/138‑1 (MQ=255) aTCAGTCCAGCTTTTTCTACAGAATAGAACCCAATCACCTGACGCTTCGCCTGTAAATGATTGCTGAGCGGCCCAAGCAGATTAAATTCCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACg < 1:388993/139‑1 (MQ=255) aTCAGTCCAGCTTTTTCAACAGAATAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACg < 8:281802/139‑1 (MQ=255) aTCAGTCCAGCTTTTTCAACAGAATAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACg < 6:379140/139‑1 (MQ=255) aTCAGTCCAGCTTTTTCAACAGAAAAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACg < 2:177172/139‑1 (MQ=255) tCAGTCCAGCTTTTTCAACAGAATAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGa < 5:308652/139‑1 (MQ=255) tCCAGCTTTTTCAACAGAATAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATgg > 3:125337/1‑138 (MQ=255) cAGCTTTTTCAACAGAATAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATggt > 6:192252/1‑136 (MQ=255) cAGCTTTTTCAACAGAATAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATggt > 8:268034/1‑136 (MQ=255) cAGCTTTTTCAACAGAATAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTATAGTACCTGCTACATGATGAATAGACGAATggt > 6:297642/1‑136 (MQ=255) aGCTTTTTCAACAGAATAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCGGCTACATGTTTCATAGACGAATGGTa > 2:27404/1‑138 (MQ=255) tcaacagAATAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACg < 2:64883/118‑1 (MQ=255) tcaacagAATAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACg > 1:64883/7‑124 (MQ=255) aacagAATAGACCCCAATCACCAGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCa < 3:71795/135‑1 (MQ=255) aaTAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCaaa > 6:20787/1‑136 (MQ=255) aaTAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAg < 7:268034/139‑1 (MQ=255) aaTAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAg < 3:227208/139‑1 (MQ=255) aTAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAg < 2:181402/138‑1 (MQ=255) aCCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATc > 8:244028/1‑139 (MQ=255) cccATTGACGTGACGCTTCGCCTGTTAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATccc < 5:297642/139‑1 (MQ=255) cccAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATccc < 5:192252/139‑1 (MQ=255) cccAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATcc > 5:408425/1‑138 (MQ=255) caTCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCAtg < 2:395073/138‑1 (MQ=255) aaccACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCAtg > 1:195402/4‑139 (MQ=255) aaTCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAACAAGAAATCCCAtg > 2:5743/1‑139 (MQ=255) ccTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATATCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATgttgtt < 2:67890/139‑1 (MQ=255) tgacgcTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTGTTCTAGTTCCTGCTACATGTTTCATAGACGAATGGTCAAGCGGCTCAACAAGAAATCCCATGTTGTTTg > 6:14859/4‑139 (MQ=255) cTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTc > 8:342795/1‑138 (MQ=255) cGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAAtg > 8:323705/1‑139 (MQ=255) cGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAAtg > 1:122548/1‑139 (MQ=255) cGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAAtg > 1:146003/1‑139 (MQ=255) gCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAAtgc > 5:69973/1‑139 (MQ=255) gCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAAtg < 7:244028/138‑1 (MQ=255) | ATTGAAAGCTCATCTAAACCGTCACGGCTTGATACGAACATGACGTGCTTCGGCTGAAACGTCTCCAGTGCGCTTGCCATCAATCCAGCTTTTTCAGCGGAATAGACCCCAATCACCTGGCGCTTCGCCTGCAAGGGATTGCTAAGCGGTCCGAGCAAATTAAATACTGTTCTGAAACCCAGTTCTTTTCTTGTACCCGCTACATGTTTCATAGACGAATGATAGAGCGGTGCAAAAAGAAATCCCATGTTGTTTGCTTCAATGC > CP006881/2193083‑2193347 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |