Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
RA | CP006881 | 2,193,280 | C→T | A161A (GCG→GCA) | U712_10990 ← | Anthranilate phosphoribosyltransferase |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | CP006881 | 2,193,280 | 0 | C | T | 99.0% | 297.6 / NA | 95 | A161A (GCG→GCA) | U712_10990 | Anthranilate phosphoribosyltransferase |
Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (47/47); minor base G (1/0); total (48/47) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
CTCCAGTGCGCTTGCCATCAATCCAGCTTTTTCAGCGGAATAGACCCCAATCACCTGGCGCTTCGCCTGCAAGGGATTGCTAAGCGGTCCGAGCAAATTAAATACTGTTCTGAAACCCAGTTCTTTTCTTGTACCCGCTACATGTTTCATAGACGAATGATAGAGCGGTGCAAAAAGAAATCCCATGTTGTTTGCTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGTTTGAATTGGAACCTCTAACACCTCTAAAACATCAGCGCTTCC > CP006881/2193145‑2193414 | ctcCAGTGCGCTTGCCATCAGTCCAGCTTTTTCAACAGAATAGACCCCAATCACCTGACGCTTCGCCTGAAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGc > 7:137224/1‑138 (MQ=255) tGCGCTTGCCATCAGTCCAGCTTTTTCAACAGAATAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATATCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGt > 1:67890/1‑139 (MQ=255) cgcTTGCCATCAGTCCAGCTTTTTCAACAGAATAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAACCCTCCCTCTTGTCTAGTACCTCCTCCATggat > 6:298403/1‑136 (MQ=255) cTTGCCATCAGTCCAGCTTTTTCAACAGAATAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCa > 5:379140/1‑139 (MQ=255) cTTGCCATCAGTCCAGCTTTTTCAACAGAATAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCa < 4:183843/139‑1 (MQ=255) ttGCCATCAGTCCAGCTTTTTCAACAGAATAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCa > 7:281802/1‑138 (MQ=255) ttGCCATCAGTCCAGCTTTTTCAACAGAATAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCa > 8:229462/1‑138 (MQ=255) ccATCAGTCCAGCTTTTTCAACAGAATAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATTTTTCATAg < 4:158274/138‑1 (MQ=255) ccATCAGTCCAGCTTTTTCAACAGAATAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAg < 8:384687/138‑1 (MQ=255) aTCAGTCCAGCTTTTTCTACAGAATAGAACCCAATCACCTGACGCTTCGCCTGTAAATGATTGCTGAGCGGCCCAAGCAGATTAAATTCCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACg < 1:388993/139‑1 (MQ=255) aTCAGTCCAGCTTTTTCAACAGAATAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACg < 6:379140/139‑1 (MQ=255) aTCAGTCCAGCTTTTTCAACAGAATAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACg < 8:281802/139‑1 (MQ=255) aTCAGTCCAGCTTTTTCAACAGAAAAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACg < 2:177172/139‑1 (MQ=255) tCAGTCCAGCTTTTTCAACAGAATAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGa < 5:308652/139‑1 (MQ=255) tCCAGCTTTTTCAACAGAATAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATgg > 3:125337/1‑138 (MQ=255) cAGCTTTTTCAACAGAATAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATggt > 6:192252/1‑136 (MQ=255) cAGCTTTTTCAACAGAATAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATggt > 8:268034/1‑136 (MQ=255) cAGCTTTTTCAACAGAATAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTATAGTACCTGCTACATGATGAATAGACGAATggt > 6:297642/1‑136 (MQ=255) aGCTTTTTCAACAGAATAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCGGCTACATGTTTCATAGACGAATGGTa > 2:27404/1‑138 (MQ=255) tcaacagAATAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACg > 1:64883/7‑124 (MQ=255) tcaacagAATAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACg < 2:64883/118‑1 (MQ=255) aacagAATAGACCCCAATCACCAGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCa < 3:71795/135‑1 (MQ=255) aaTAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCaaa > 6:20787/1‑136 (MQ=255) aaTAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAg < 7:268034/139‑1 (MQ=255) aaTAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAg < 3:227208/139‑1 (MQ=255) aTAGACCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAg < 2:181402/138‑1 (MQ=255) aCCCCAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATc > 8:244028/1‑139 (MQ=255) cccATTGACGTGACGCTTCGCCTGTTAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATccc < 5:297642/139‑1 (MQ=255) cccAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATccc < 5:192252/139‑1 (MQ=255) cccAATCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATcc > 5:408425/1‑138 (MQ=255) caTCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCAtg < 2:395073/138‑1 (MQ=255) aaccACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCAtg > 1:195402/4‑139 (MQ=255) aaTCACCTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAACAAGAAATCCCAtg > 2:5743/1‑139 (MQ=255) ccTGACGCTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATATCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATgttgtt < 2:67890/139‑1 (MQ=255) tgacgcTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTGTTCTAGTTCCTGCTACATGTTTCATAGACGAATGGTCAAGCGGCTCAACAAGAAATCCCATGTTGTTTg > 6:14859/4‑139 (MQ=255) cTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTc > 8:342795/1‑138 (MQ=255) cGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAAtg > 1:122548/1‑139 (MQ=255) cGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAAtg > 1:146003/1‑139 (MQ=255) cGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAAtg > 8:323705/1‑139 (MQ=255) gCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAAtgc > 5:69973/1‑139 (MQ=255) gCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAAtg < 7:244028/138‑1 (MQ=255) taaaggATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCtt > 8:121797/5‑139 (MQ=255) gATTGCTGAGCGTCCCAAGCAGATTATATACCGATCTGAAACCTAGCTCTTTTATAGTACCTGCTACATGTTTAATATACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGAc < 5:14859/139‑1 (MQ=255) gATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGAc < 6:344634/139‑1 (MQ=255) gATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGGACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGGTGTTTGTTTCAATGCTGCTTTTGAc < 7:215951/139‑1 (MQ=255) ttGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAg > 5:203424/1‑101 (MQ=255) ttGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAg < 6:203424/101‑1 (MQ=255) ttGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCt > 8:66000/1‑139 (MQ=255) ctgaGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGTCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCtttt > 2:256054/4‑139 (MQ=255) ctgaGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCtttt > 4:43144/4‑139 (MQ=255) aGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGTCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCgg > 1:171647/1‑139 (MQ=255) cGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGaa > 8:120628/1‑95 (MQ=255) cGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGaa < 7:120628/95‑1 (MQ=255) cGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCgg > 1:251356/1‑137 (MQ=255) cGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGa < 1:256054/139‑1 (MQ=255) caaGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGt < 7:121797/137‑1 (MQ=255) caaGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACAGGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATTCTGCTTTTGACCTTTTCGGGAGTGGt < 8:300767/137‑1 (MQ=255) aGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGttt < 6:69973/139‑1 (MQ=255) gCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGttt > 8:358779/1‑138 (MQ=255) aTTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGt < 4:13170/132‑1 (MQ=255) aTTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGt > 3:13170/1‑132 (MQ=255) aTTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGTTTGaa > 1:34824/1‑137 (MQ=255) aaaTACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATTGGAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGTTTGAAtaga < 6:76534/138‑4 (MQ=255) aaaTACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGTTTGAAtaga < 2:54606/138‑4 (MQ=255) aaaTACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGTTTGAAtaga < 7:358779/138‑4 (MQ=255) aaaTACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGTTTGAAtaga < 7:229462/138‑4 (MQ=255) aaaTACCGTGCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGTTTGAAtaga < 6:83015/138‑4 (MQ=255) aTACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGAc < 3:228479/112‑1 (MQ=255) aTACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGAc > 4:228479/1‑112 (MQ=255) gTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGa < 3:364979/117‑1 (MQ=255) gTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGa > 4:364979/1‑117 (MQ=255) gTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGTTTGAAtaga > 8:329690/1‑128 (MQ=255) gTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGTTTGAAtaga < 7:329690/131‑4 (MQ=255) gTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGTTTGAATAGAAACctc > 5:361132/1‑137 (MQ=255) gTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGTTTGAATAGAAACctc > 4:362184/1‑137 (MQ=255) gTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGTTTGAATAGAAACctc > 4:443990/1‑137 (MQ=255) gTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGTTTGAATAGAAACctc > 1:283061/1‑137 (MQ=255) gTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGTTTGAATAGAAACctc > 8:22686/1‑137 (MQ=255) ttCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAAtgc < 1:135766/96‑1 (MQ=255) ttCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAAtgc > 2:135766/1‑96 (MQ=255) ttCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGTTTGAATAGAAACCTCTag < 7:342795/139‑2 (MQ=255) ttCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGTTTGAATAGAAACCTCTag < 8:137224/139‑2 (MQ=255) cTGAAACCTATCTCTTTTCTAGTACCTGCTACATGATTCAGAGACTAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTTCTTTTGACCTTTTCGGGAGTGGTTTGAATAGAAACCTCTagc < 5:186090/138‑3 (MQ=255) tGACACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGGTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGTTTGAATAGAAACCTCTagc < 8:167798/137‑3 (MQ=255) caaCCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGAGGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGTTTGAATAGAAACCTCTagctcc < 1:131064/137‑6 (MQ=255) cctagctcttttctaGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGTTTGAATAGAAACCTCTAGCTCCTCTa < 7:323705/133‑1 (MQ=255) tagctcttttctaGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGTTTGAATAGAAACCTCTAGCTCCTCTaa > 8:132836/5‑138 (MQ=255) tagctcttttctaGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGTTTGAATAGAAACCTCTAGCTCCTCTaa > 7:94185/5‑138 (MQ=255) agctcttttctaGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGTTTGAATAGAAACCTCTAGCTCCTCTaaaa > 6:396861/4‑139 (MQ=255) ttttctaGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGTTTGAATAGAAACCTCTAGCTCCTCTAAAACAt < 5:20787/137‑1 (MQ=255) ttctaGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAAtgc > 8:103034/1‑78 (MQ=255) ttctaGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAAtgc < 7:103034/78‑1 (MQ=255) gTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGa < 8:180649/93‑1 (MQ=255) gTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGa > 7:180649/1‑93 (MQ=255) aCCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGTTTGAATAGAAACCTCTAGCTCCTCTAAAACATCAGCGCTTcc < 2:283061/138‑1 (MQ=255) | CTCCAGTGCGCTTGCCATCAATCCAGCTTTTTCAGCGGAATAGACCCCAATCACCTGGCGCTTCGCCTGCAAGGGATTGCTAAGCGGTCCGAGCAAATTAAATACTGTTCTGAAACCCAGTTCTTTTCTTGTACCCGCTACATGTTTCATAGACGAATGATAGAGCGGTGCAAAAAGAAATCCCATGTTGTTTGCTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGTTTGAATTGGAACCTCTAACACCTCTAAAACATCAGCGCTTCC > CP006881/2193145‑2193414 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |