| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP006881 | 2,193,339 | C→T | A142T (GCA→ACA) | U712_10990 ← | Anthranilate phosphoribosyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 2,193,339 | 0 | C | T | 98.9% | 270.1 / NA | 88 | A142T (GCA→ACA) | U712_10990 | Anthranilate phosphoribosyltransferase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (42/45); minor base A (0/1); total (42/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CTTCGCCTGCAAGGGATTGCTAAGCGGTCCGAGCAAATTAAATACTGTTCTGAAACCCAGTTCTTTTCTTGTACCCGCTACATGTTTCATAGACGAATGATAGAGCGGTGCAAAAAGAAATCCCATGTTGTTTGCTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGTTTGAATTGGAACCTCTAACACCTCTAAAACATCAGCGCTTCCGCTTTTAGAAGAGACAGAGCGATTGCCGTGCTTAGCGATTTTTGCCCCTGCTGCTGAGG > CP006881/2193205‑2193473 | cTTCGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTc > 8:342795/1‑138 (MQ=255) cGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAAtg > 8:323705/1‑139 (MQ=255) cGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAAtg > 1:146003/1‑139 (MQ=255) cGCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAAtg > 1:122548/1‑139 (MQ=255) gCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAAtgc > 5:69973/1‑139 (MQ=255) gCCTGTAAAGGATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAAtg < 7:244028/138‑1 (MQ=255) taaaggATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCtt > 8:121797/5‑139 (MQ=255) gATTGCTGAGCGTCCCAAGCAGATTATATACCGATCTGAAACCTAGCTCTTTTATAGTACCTGCTACATGTTTAATATACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGAc < 5:14859/139‑1 (MQ=255) gATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGAc < 6:344634/139‑1 (MQ=255) gATTGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGGACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGGTGTTTGTTTCAATGCTGCTTTTGAc < 7:215951/139‑1 (MQ=255) ttGCTGAGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCt > 8:66000/1‑139 (MQ=255) ctgaGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGTCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCtttt > 2:256054/4‑139 (MQ=255) ctgaGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCtttt > 4:43144/4‑139 (MQ=255) aGCGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGTCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCgg > 1:171647/1‑139 (MQ=255) cGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCgg > 1:251356/1‑137 (MQ=255) cGGCCCAAGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGa < 1:256054/139‑1 (MQ=255) caaGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGt < 7:121797/137‑1 (MQ=255) caaGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACAGGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATTCTGCTTTTGACCTTTTCGGGAGTGGt < 8:300767/137‑1 (MQ=255) aGCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGttt < 6:69973/139‑1 (MQ=255) gCAGATTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGttt > 8:358779/1‑138 (MQ=255) aTTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGt > 3:13170/1‑132 (MQ=255) aTTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGt < 4:13170/132‑1 (MQ=255) aTTAAATACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGTTTGaa > 1:34824/1‑137 (MQ=255) aaaTACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATTGGAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGTTTGAAtaga < 6:76534/138‑4 (MQ=255) aaaTACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGTTTGAAtaga < 7:358779/138‑4 (MQ=255) aaaTACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGTTTGAAtaga < 7:229462/138‑4 (MQ=255) aaaTACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGTTTGAAtaga < 2:54606/138‑4 (MQ=255) aaaTACCGTGCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGTTTGAAtaga < 6:83015/138‑4 (MQ=255) aTACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGAc > 4:228479/1‑112 (MQ=255) aTACCGTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGAc < 3:228479/112‑1 (MQ=255) gTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGa < 3:364979/117‑1 (MQ=255) gTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGa > 4:364979/1‑117 (MQ=255) gTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGTTTGAAtaga > 8:329690/1‑128 (MQ=255) gTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGTTTGAAtaga < 7:329690/131‑4 (MQ=255) gTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGTTTGAATAGAAACctc > 8:22686/1‑137 (MQ=255) gTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGTTTGAATAGAAACctc > 5:361132/1‑137 (MQ=255) gTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGTTTGAATAGAAACctc > 1:283061/1‑137 (MQ=255) gTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGTTTGAATAGAAACctc > 4:443990/1‑137 (MQ=255) gTTCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGTTTGAATAGAAACctc > 4:362184/1‑137 (MQ=255) ttCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAAtgc < 1:135766/96‑1 (MQ=255) ttCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAAtgc > 2:135766/1‑96 (MQ=255) ttCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGTTTGAATAGAAACCTCTag < 8:137224/139‑2 (MQ=255) ttCTGAAACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGTTTGAATAGAAACCTCTag < 7:342795/139‑2 (MQ=255) cTGAAACCTATCTCTTTTCTAGTACCTGCTACATGATTCAGAGACTAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTTCTTTTGACCTTTTCGGGAGTGGTTTGAATAGAAACCTCTagc < 5:186090/138‑3 (MQ=255) tGACACCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGGTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGTTTGAATAGAAACCTCTagc < 8:167798/137‑3 (MQ=255) caaCCTAGCTCTTTTCTAGTACCTGCTACATGTTTCATAGAGGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGTTTGAATAGAAACCTCTagctcc < 1:131064/137‑6 (MQ=255) cctagctcttttctaGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGTTTGAATAGAAACCTCTAGCTCCTCTa < 7:323705/133‑1 (MQ=255) tagctcttttctaGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGTTTGAATAGAAACCTCTAGCTCCTCTaa > 7:94185/5‑138 (MQ=255) tagctcttttctaGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGTTTGAATAGAAACCTCTAGCTCCTCTaa > 8:132836/5‑138 (MQ=255) agctcttttctaGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGTTTGAATAGAAACCTCTAGCTCCTCTaaaa > 6:396861/4‑139 (MQ=255) ttttctaGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGTTTGAATAGAAACCTCTAGCTCCTCTAAAACAt < 5:20787/137‑1 (MQ=255) ttctaGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAAtgc < 7:103034/78‑1 (MQ=255) ttctaGTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAAtgc > 8:103034/1‑78 (MQ=255) gTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGa > 7:180649/1‑93 (MQ=255) gTACCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGa < 8:180649/93‑1 (MQ=255) aCCTGCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGTTTGAATAGAAACCTCTAGCTCCTCTAAAACATCAGCGCTTcc < 2:283061/138‑1 (MQ=255) cctgCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGAc < 4:305068/77‑1 (MQ=255) cctgCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGAc > 3:305068/4‑80 (MQ=255) tgCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGAc > 2:258951/2‑78 (MQ=255) tgCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGAc < 1:258951/77‑1 (MQ=255) gCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGAc > 5:426585/1‑77 (MQ=255) gCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGAc < 6:426585/77‑1 (MQ=255) gCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGTTTGAAtaga < 6:75283/101‑4 (MQ=255) gCTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGTTTGAAtaga > 5:75283/1‑98 (MQ=255) cTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGTTTGAATAGAAACCTCTAGCTCCTCTAAAACATCAGCGCTTCCGCttt < 7:66000/138‑1 (MQ=255) cTACATGTTTCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGTTTGAATAGAAACCTCTAGCTCCTCTAAAACATCAGCGCTTCCGCtt < 3:362184/137‑1 (MQ=255) ttCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGTTTGAATAGAAACCTCTAGCTCCTCTaa > 8:239379/1‑110 (MQ=255) ttCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGTTTGAATAGAAACCTCTAGCTCCTCTaa < 7:239379/110‑1 (MQ=255) ttCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGTTTGAATAGAAACCTCTAGCTCCTCTAAAACATCAGCGCTTCCGCTTTTAGAAgaga > 6:220136/1‑139 (MQ=255) ttCATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGTTTGAATAGAAACCTCTAGCTCCTCTAAAACATCAGCGCTTCCGCTTTTAGAAgaga > 5:339306/1‑139 (MQ=255) cATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGTTTGAATAGAAACCTCTAGCTCCTCTAAAACATCAGCGCTTCCGCTTTTAGAAgaga > 7:185362/1‑137 (MQ=255) cATAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGTTTGAATAGAAACCTCTAGCTCCTCTAAAACATCAGCGCTTCCGCTTTTAGAAGAGAc < 7:132836/138‑1 (MQ=255) aTAGACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGGTTGATTCAATGCTGCTTTTGACCTTTTCGGGAGTGGTTTGAATAGAAACCTCTAGCTCCTCTAAAACATCAGCGCTTCCGCTTTTAGAAGAGACag < 4:125337/139‑1 (MQ=255) gACGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGTTTGAATAGAAACCTCTAGCTCCTCTAAAACATCAGCGCTTCCGCTTTTAGAAGAGACAGAGc < 5:396861/139‑1 (MQ=255) aCGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGTTTGAATAGAAACCTCTAGCTCCTCTAAAACATCAGCGCTTCTGCTTTTAGAAGAGACAGAGc > 6:415376/1‑138 (MQ=255) cGAATGGTAAAGCGTCGCAAAAAGAAATCCCATGTGGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGTTTGAATAGAAACCTCTAGCTCCTCTAAAACATCAGCGCTTCCGCTTTTAGAAGAGACAGAGCGa < 2:171647/139‑1 (MQ=255) cGAATGGTAAAGCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGTTTGAATAGAAACCTCTAGCTCCTCTAAAACATCAGCGCTTCCGCTTTTAGAAGAGACAGAGCGa < 2:34824/139‑1 (MQ=255) aTGGTAAAGCGGCGCTAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGTTTGAATAGAAACCTCTAGCTCCTCTAAAACATCAGCGCTTCCGCTTTTAGAAGAGACAGAGCGATTg < 4:337454/139‑1 (MQ=255) gtaaagCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGTTTGAATAGAAACCTCTAGCTCCTCTAAAACATCAGCGCTTCCGCTTTTAGAAGAGACAGAGCGATTGcc < 8:94185/134‑1 (MQ=255) gtaaagCGGCGCAAAAAGAAATCCCATGTTGTGTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGTTTGAATAGAAACCTCTAGCTCCTCTAAAACATCAGCGCTTCCGCTTTTAGAAGAGACAGAGCGATTGcc < 4:164298/134‑1 (MQ=255) aagCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGTTTGAATAGAAACCTCTAGCTCCTCTAAAACATCAGCGCTTCCGCTTTTAGAAGAGACAGAGCGATTGCCATGc < 3:443990/138‑1 (MQ=255) aagCGGCGCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGTTTGAATAGAAACCTCTAGCTCCTCTAAAACATCAGCGCTTCCGCTTTTAGAAGAGACAGAGCGATTGCCATGc < 7:22686/138‑1 (MQ=255) cgCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGTTTGAATAGAAACCTCTAGCTCCTCTAAAACATCAGCGCTTCCGCtt > 5:79147/2‑106 (MQ=255) cgCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGTTTGAATAGAAACCTCTAGCTCCTCTAAAACATCAGCGCTTCCGCtt < 6:79147/105‑1 (MQ=255) cgCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGTTTGAATAGAAACCTCTAGCTCCTCTAAAACATCAGCGCTTCCGCTTTTAGAAGAGACAGAGCGATTGCCATGCTTAGc > 4:27346/2‑138 (MQ=255) cgCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGTTTGAATAGAAACCTCTAGCTCCTCTAAAACATCAGCGCTTCCGCTTTTAGAAGAGACAGAGCGATTGCCATGCTTAGc > 1:53051/2‑138 (MQ=255) gCAAAAAGAAATCCCATGTTGTTTGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGTTTGAATAGAAACCTCTAGCTCCTCTAAAACATCAGCGCTTCCGCTTTTAGAAGAGACAGAGCGATTGCCATGCTTAGCGa > 5:219664/1‑139 (MQ=255) ttgtttgtTTCAATGCTGCTTTTGACCTATTCGGGAGTGGGTTGAATAGAAACCTCTAGCTCCTCTAAAACATCAGCGCTTCCGCTTTTAGAAGAGACAGAGCGATTGCCATGCTTAGCGATTTTCGCACcagcagcc < 5:106253/138‑2 (MQ=255) tttGTTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGTTTGAATAGAAACCTCTAGCTCCTCTAAAACATCAGCGCTTCCGCTTTTAGAAGAGACAGAGCGATTGCCATGCTTAGCGATTTTCGCACCAGCTGCCGAgg > 3:390336/1‑139 (MQ=255) | CTTCGCCTGCAAGGGATTGCTAAGCGGTCCGAGCAAATTAAATACTGTTCTGAAACCCAGTTCTTTTCTTGTACCCGCTACATGTTTCATAGACGAATGATAGAGCGGTGCAAAAAGAAATCCCATGTTGTTTGCTTCAATGCTGCTTTTGACCTTTTCGGGAGTGGTTTGAATTGGAACCTCTAACACCTCTAAAACATCAGCGCTTCCGCTTTTAGAAGAGACAGAGCGATTGCCGTGCTTAGCGATTTTTGCCCCTGCTGCTGAGG > CP006881/2193205‑2193473 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |