| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP006881 | 2,193,965 | T→C | G439G (GGA→GGG) | U712_10995 ← | Anthranilate synthase component 1 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 2,193,965 | 0 | T | C | 98.9% | 306.5 / NA | 94 | G439G (GGA→GGG) | U712_10995 | Anthranilate synthase component 1 |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (49/44); minor base A (0/1); total (49/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.79e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TATTACAGCTTTCTTCGTATTCGGCTTCCGGAACAGAATCCGCAACAATTCCAGCACCTGCCTGTATCGATGCAACACCGTTCTTTACGCTCATGGTGCGAATCGTAATACAAGAGTCGATATTACCGTCAAATCCGATGTAGGCGATACAGCCGCCGTATGTCTCTCTCGGTGTTGGCTCGAGCTCTTGCAAAAGCTGCATAGCACGGATTTTTGGAGCGCCTGTTAAAGTTCCCGCCGGGAAAGCGGACATCAGTGCATCGACAG > CP006881/2193832‑2194098 | tattaCAGCTTTCTTCGTATTCGGCTTCCGGAACAGAATCAGCAACAATGCCAGCACCTGCCTGTATCGATGCAACACCGTTCTTTACACTCATCGTGCGAATCGTAATACAAGAGTCGATATTCCCGTCAAAccca < 8:133917/137‑2 (MQ=255) attaCAGCTTTCTTCGTATTCGGCTTCCGGAACAGAATCAGCAACAATGCCAGCACCTGCCTGTATCGATGCAACACCGTTCTTTACACTCATCGTGCGAATCGTAATACAAGAGTCGATATTCCCGTCAAACCCAAt < 6:297412/138‑1 (MQ=255) attaCAGCTTTCTTCGTATTCGGCTTCCGGAACAGAATCAGCAACAATGCCAGCACCTGCCTGTATCGATGCAACACCGTTCTTTACACTCATCGTGCGAATCGTAATACAAGAGTCGATATTCCCGTCAAACCCAATg > 2:248174/1‑139 (MQ=255) ttaCAGCTTTCTTCGTATTCGGCTTCCGGAACAGAATCAGCAACAATGCCAGCACCTGCCTGTATCGATGCAACACCGTTCTTTACACTCATCGTGCGAATCGTAATACAAGAGTCGATATTCCCGTCAAACCCAATg > 6:126789/1‑138 (MQ=255) ttaCAGCTTTCTTCGTATTCGGCTTCCGGAACAGAATCAGCAACAATGCCAGCACCTGCCTGTATCGATGCAACACCGTTCTTTACACTCATCGTGCGAATCGTAATACAAGAGTCGATATTCCCGTCAAACCCAATGt < 8:147392/139‑1 (MQ=255) ttaCAGCTTTCTTCGTATTCGGCTTCCGGAACAGAATCAGCAACAATGCCAGCACCTGCCTGTATCGATGCAACACCGTTCTTTACACTCATCGTGCGAATCGTAATACAAGAGTCGATATTCCCGTCAAACCCAATGt < 5:61469/139‑1 (MQ=255) aCAGCTTTCTTCGTATTCGGCTTCCGGAACAGAATCAGCAACAATGCCAGCACCTGCCTGTATCGATGCAACACCGTTCTTTACACTCATCGTGCGAATCGTAATACAAGAGTCGATATTCCCGTCAAACCCAATGTa < 4:65723/138‑1 (MQ=255) aGCTTTCTTCGTATTCGGCTTCCGGAACAGAATCAGCAACAATGCCAGCACCTGCCTGTATCGATGCAACACCGTTCTTTACACTCATCGTGCGAATCGTAATACAAGAGTCGATATTCCCGTCAAACCCAATGTAGGc < 4:300034/139‑1 (MQ=255) gCTTTCTTCGTATTCGGCTTCCGGAACAGAATCAGCAACAATGCCAGCACCTGCCTGTATCGATGCAACACCGTTCTTTACACTCATCGTGCGAATCGTAATACAAGAGTCGATATTCCCGTCAAACCCAATGTAGGc > 6:11020/1‑138 (MQ=255) cTTTCTTCGTATTCGGCTTCCGGAACAGAATCAGCAACAATGCCAGCACCTGCCTGTATCGATGCAACACCGTTCTTTACACTCATCGTGCGAATCGTAATACAAGAGTCGATATTCCCGTCAAACCCAATGTAGGca > 2:430299/1‑137 (MQ=255) ttcttcGTATTCGGCTTCCGGAACAGAATCAGCAACAATGCCAGCACCTGCCTGTATCGATGCAACACCGTTCTTTACACTCATCGTGCGAATCGTAATACAAGAGTCGATATTCCCGTCAAACCCAATGTAGGCAATa > 1:267138/1‑139 (MQ=255) tcttcGTATTCGGCTTCCGGAACAGAATCAGCAACAATGCCAGCACCTGCCTGTATCGATGCAACACCGTTCTTTACACTCATCGTGCGAATCGTAATACAAGAGTCGATATTCCCGTCAAACCCAATGTAGGCAAt < 3:14199/137‑1 (MQ=255) tcttcGTATTCGGCTTCCGGAACAGAATCAGCAACAATGCCAGCACCTGCCTGTATCGATGCAACACCGTTCTTTACACTCATCGTGCGAATCGTAATACAAGAGTCGATATTCCCGTCAAACCCAATGTAGGCAATa < 8:74266/138‑1 (MQ=255) tcttcGTATTCGGCTTCCGGAACAGAATCAGCAACAATGCCAGCACCTGCCTGTATCGATGCAACACCGTTCTTTACACTCATCGTGCGAATCGTAATACAAGAGTCGATATTCCCGTCAAACCCAATGTAGGCAATa < 8:336114/138‑1 (MQ=255) cGTATTCGGCTTCCGGAACAGAATCAGCAACAATGCCAGCACCTGCCTGTATCGATGCAACACCGTTCTTTACACTCATCGTGCGAATCGTAATACAAGAGTCGATATTCCCGTCAAACCCAATGTAGGCAATACacc < 1:430299/138‑3 (MQ=255) cGTATTCGGCTTCCGGAACAGAATCAGCAACAATGCCAGCACCTGCCTGTATCGATGCAACACCGTTCTTTACACTCATCGTGCGAATCGTAATACAAGAGTCGATATTCCCGTCAAACCCAATGTAGGCAATACacc < 1:248174/138‑3 (MQ=255) cGTATTCGGCTTCCGGAACAGAATCAGCAACAATGCCAGCACCTGCCTGTATCGATGCAACACCGTTCTTTACACTCATCGTGCGAATCGTAATACAAGAGTCGATATTCCCGTCAAACCCAATGTAGGCAATACa < 3:440718/136‑1 (MQ=255) gAACAGAATCAGCAACAATGCCAGCACCTGCCTGTATCGATGCAACACCGTTCTTTACACTCATCGTGCGAATCGTAATACAAGAGTCGATATTCCCGTCAAACCCAATGTAGGCAATACACCCTCCGTATGtctctct < 8:442436/139‑1 (MQ=255) gAACAGAATCAGCAACAATGCCAGCACCTGCCTGTATCGATGCAACACCGTTCTTTACACTCATCGTGCGAATCGTAATACAAGAGTCGATATTCCCGTCAAACCCAATGTAGGCAATACACCCTCCGTATGtctctct < 4:58816/139‑1 (MQ=255) gAACAGAATCAGCAACAATGCCAGCACCTGCCTGTATCGATGCAACACCGTTCTTTACACTCATCGTGCGAATCGTAATACAAGAGTCGATATTCCCGTCAAACCCAATGTAGGCAATACACCCTCCGTATGtctctct < 5:11020/139‑1 (MQ=255) aGAATCAGCAACAATGCCAGCACCTGCCTGTATCGATGCAACACCGTTCTTTACACTCATCGTGCGAATCGTAATACAAGAGTCGATATTCCCGTCAAACCCAATGTAGGCAATACACCCTCCGTATGTCTCTCTCGgt > 8:33295/1‑139 (MQ=255) aaTCAGCAACAATGCCAGCACCTGCCTGTATCGATGCAACACCGTTCTTTACACTCATCGTGCGAATCGTAATACAAGAGTCGATATTCCCGTCAAACCCAATGTAGGCAATACACACTCCGTATGTCTCTCTCGgtgt < 1:225170/139‑1 (MQ=255) aaTCAGCAACAATGCCAGCACCTGCCTGTATCGATGCAACACCGTTCTTTACACTCATCGTGCGAATCGTAATACAAGAGTCGAGATTCCCGTCAAACCCAATGTAGGCAATACCCCAGCCGTATTTCTCTCTCGgtgt > 2:225170/1‑139 (MQ=255) aGCACCTGCCTGTATCGATGCAACACCGTTCTTTACACTCATCGTGCGAATCGTAATACAAGAGTCGATATTCCCGTCAAACCCAATGTAGGCAATACACCCTCCGTATGTCTCTCTCGGTGTGGGCTCGAGTTCGTg > 2:344646/1‑138 (MQ=255) gcctgTATCGATGCAACACCGTTCTTTACACTCATCGTGCGAATCGTAATACAAGAGTCGATATTCCCGTCAAACCCAATGTAGGCAATACACCCTCCGTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCt > 4:218714/1‑139 (MQ=255) gcctgTATCGATGCAACACCGTTCTTTACACTCATCGTGCGAATCGTAATACAAGAGTCGATATTCCCGTCAAACCCAATGTAGGCAATACACCCTCCGTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCt > 6:170769/1‑139 (MQ=255) cctgTATCGATGCAACACCGTTCTTTACACTCATCGTGCGAATCGTAATACAAGAGTCGATATTCCCGTCAAACCCAATGTAGGCAATACACCCTCCGTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTg > 7:436215/1‑139 (MQ=255) tATCGATGCAACACCGTTCTTTACACTCATCGTGCGAATCGTAATACAAGAGTCGATATTCCCGTCAAACCCAATGTa < 5:120373/78‑1 (MQ=255) tATCGATGCAACACCGTTCTTTACACTCATCGTGCGAATCGTAATACAAGAGTCGATATTCCCGTCAAACCCAATGTa > 6:120373/1‑78 (MQ=255) tATCGATGCAACACCGTTCTTTACACTCATCGTGCGAATCGTAATACAAGAGTCGATATTCCCGTCAAACCCAATGTAGGCAATACACCCTCCGTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCAtg > 1:352051/1‑138 (MQ=255) cGATGCAACACCGTTCTTTACACTCATCGTGCGAATCGTAATACAAGAGTCGATATTCCCGTCAAACCCAATGTAGGCAATACCCCCGCCGTATGTCTCGCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCa > 7:172714/1‑139 (MQ=255) cGATGCAACACCGTTCTTTACACTCATCGTGCGAATCGTAATACAAGAGTCGATATTCCCGTCAAACCCAATGTAGGCAATACAccc < 1:213087/87‑1 (MQ=255) cGATGCAACACCGTTCTTTACACTCATCGTGCGAATCGTAATACAAGAGTCGATATTCCCGTCAAACCCAATGTAGGCAATACAccc > 2:213087/1‑87 (MQ=255) gaagCAACACCGTTCTTTACACTCATCGTGCGAATCGTAATACAAGAGTCGATAATCCCGTCAAACCCAATGTAGGCAATACACCCTCCGTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCa < 4:73625/135‑1 (MQ=255) gATGCAACACCGTTCTTTACACTCATCGTGCGAATCGTAATACAAGAGTCGATATTCCCGTCAAACCCAATGTAGGCAATACACCCTCCGTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCa < 7:33295/138‑1 (MQ=255) gATGCAACACCGTTCTTTACACTCATCGTGCGAATCGTAATACAAGAGTCGATATTCCCGTCAAACCCAATGTAGGCAATACACCCTCCGTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCa < 4:246887/138‑1 (MQ=255) gATGCAACACCGTTCTTTACACTCATCGTGCGAATCGTAATACAAGAGTCGATATTCCCGTCAAACCCAATGTAGGCAATACACCCTCCGTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCa < 6:113872/138‑1 (MQ=255) gATGCAACACCGTTCTTTACACTCATCGTGCGAATCGTAATACAAGAGTCGATATTCCCGTCAAACCCAATGTAGGCAATACACCCTCCGTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCa < 8:383012/138‑1 (MQ=255) aTGCAACACCGTTCTTTACACTCATCGTGCGAATCGTAATACAAGAGTCGATATTCCCGTCAAACCCAAt < 3:60511/70‑1 (MQ=255) aTGCAACACCGTTCTTTACACTCATCGTGCGAATCGTAATACAAGAGTCGATATTCCCGTCAAACCCAAt > 4:60511/1‑70 (MQ=255) aTGCAACACCGTTCTTTACACTCATCGTGCGAATCGTAATACAAGAGTCGATATTCCCGTCAAACCCAATGTAGGCAATACacc < 1:199433/84‑3 (MQ=255) aTGCAACACCGTTCTTTACACTCATCGTGCGAATCGTAATACAAGAGTCGATATTCCCGTCAAACCCAATGTAGGCAATACacc > 2:199433/1‑82 (MQ=255) tGCAACACCGTTCTTTACACTCATCGTGCGAATCGTAATACAAGAGTCGATATTCCCGTCAAACCCAATGt > 4:226046/1‑71 (MQ=255) tGCAACACCGTTCTTTACACTCATCGTGCGAATCGTAATACAAGAGTCGATATTCCCGTCAAACCCAATGt < 3:226046/71‑1 (MQ=255) tGCAACACCGTTCTTTACACTCATCGTGCGAATCGTAATACAAGAGTCGATATTCCCGTCAAACCCAATGTAGGCAATACacc < 1:381784/83‑3 (MQ=255) tGCAACACCGTTCTTTACACTCATCGTGCGAATCGTAATACAAGAGTCGATATTCCCGTCAAACCCAATGTAGGCAATACacc > 2:381784/1‑81 (MQ=255) tGCAACACCGTTCTTTACACTCATCGTGCGAATCGTAATACAAGAGTCGATATTCCCGTCAAACCCAATGTAGGCAATACACCCTCCGTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACgg > 8:72339/1‑139 (MQ=255) tGCAACACCGTTCTTTACACTCATCGTGCGAATCGTAATACAAGAGTCGATATTACCGTCAAACCCAATGTAGGCCATACACCCTCCGTATGTCTCTCTCGGTGGTGGGTCGCGTTCTTGCAAAAGCTGCATGGCCCgg > 8:419910/1‑139 (MQ=255) tGCAACACCGTTCTTTACACTCATCGTGCGAATCGTAATAAAAGAGTCGATATTCCCGTCAAACCCAATGTAGGCAATACACACTCCCTATGTCTCTCTCGTTGATGGATCGAGTTCTTGCAAAAGCTGCAtggaaag > 3:101555/1‑132 (MQ=255) ttCTTTACACTCATCGTGCGAATCGTAATACAAGAGTCGATATTCCCGTCAAACCCAATGt < 4:402926/61‑1 (MQ=255) ttCTTTACACTCATCGTGCGAATCGTAATACAAGAGTCGATATTCCCGTCAAACCCAATGt > 3:402926/1‑61 (MQ=255) ttCTTTACACTCATCGTGCGAATCGTAATACAAGAGTCGATATTCCCGTCAAACCCAATGTAg > 3:241431/1‑63 (MQ=255) ttCTTTACACTCATCGTGCGAATCGTAATACAAGAGTCGATATTCCCGTCAAACCCAATGTAg < 4:241431/63‑1 (MQ=255) ttCTTTACACTCATCGTGCGAATCGTAATACAAGAGTCGATATTCCCGTCAAACCCAATGTAGGCAATACACCCTCCGTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCa > 5:234637/1‑126 (MQ=255) ttCTTTACACTCATCGTGCGAATCGTAATACAAGAGTCGATATTCCCGTCAAACCCAATGTAGGCAATACACCCTCCGTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCa < 6:234637/126‑1 (MQ=255) ttCTTTACACTCATCGTGCGAATCGTAATACAAGAGTCGATATTCCCGTCAAACCCAATGTAGGCAATACACCCTCCGTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTgggtg > 3:157379/1‑137 (MQ=255) ttCTTTACACTCATCGTGCGAATCGTAATACAAGAGTCGATATTCCCGTCAAACCCAATGTAGGCAATACACCCTCCGTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTgggtg < 2:267138/139‑3 (MQ=255) ttCTTTACACTCATCGTGCGAATCGTAATACAAGAGTCGATATTCCCGTCAAACCCAATGTAGGCAATACACCCTCCGTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTgggtg > 6:421316/1‑137 (MQ=255) cTTTACACTCATCGTGCGAATCGTAATACAAGAGTCGATATTCCCGTCAAACCCAATGTAGGCAATACACCCTCCGTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTgc < 8:204017/138‑1 (MQ=255) tttACACTCATCGTGCGAATCGTAATACAAGAGTCGATATTCCCGTCAAACCCAATGTAGGCAATACACCCTCCGTATGTCTCTCTCGGTGTTGGCGCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTgcgc > 4:69981/1‑139 (MQ=255) acTCATCGTGCGAATCGTAATACAAGAGTCGATATTCCCGTCAAACCCAATGTAGGCAATACACCCTCCGTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGt > 7:198454/2‑138 (MQ=255) tCATCGTGCGAATCGTAATACAAGAGTCGATATTCCCGTCAAACCCAATGTAGGCAATACACCCTCCGTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCa < 5:172685/116‑1 (MQ=255) tCATCGTGCGAATCGTAATACAAGAGTCGATATTCCCGTCAAACCCAATGTAGGCAATACACCCTCCGTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCa > 6:172685/1‑116 (MQ=255) tCATCGTGCGAATCGTAATACAAGAGTCGATATTCCCGTCAAACCCAATGTAGGCAATACACCCTCCGTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTa > 1:278134/1‑138 (MQ=255) tCATCGTGCGAATCGTAATACAAGAGTCGATATTCCCGTCAAACCCAATGTAGGCAATACACACTCCGGATGTCTCTCTCGGGGTTGGCTGGAGTTCTTGCAAAAGCTGCATGGCACGGAGTTTGGGTGCGCCTGTGaa > 4:67416/1‑139 (MQ=255) atcgTGCGAATCGTAATACAAGAGTCGATATTCCCGTCATCCCCAATGTAGGCAATACACCCTCCGTATGTGGGTCTCGGTGTTGGCTCGAGGTCGTGCAAAAGCTGCATGGCACGGAGTTTGGGTGCGGCTGTTTAAg > 4:11965/4‑139 (MQ=255) atcgTGCGAATCGTAATACAAGAGTCGATATTCCCGTCAAACCCAATGTAGGCAATACACCCTCCGTATGtctctct < 3:245679/74‑1 (MQ=255) atcgTGCGAATCGTAATACAAGAGTCGATATTCCCGTCAAACCCAATGTAGGCAATACACCCTCCGTATGtctctct > 4:245679/4‑77 (MQ=255) atcgTGCGAATCGTAATACAAGAGTCGATATTCCCGTCAAACCCAATGTAGGCAATACACCCTCCGTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTgcgc < 6:78362/127‑1 (MQ=255) atcgTGCGAATCGTAATACAAGAGTCGATATTCCCGTCAAACCCAATGTAGGCAATACACCCTCCGTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTgcgc > 5:78362/4‑130 (MQ=255) atcgTGCGAATCGTAATACAAGAGTCGATATTCCCGTCAAACCCAATGTAGGCAATACACCCTCCGTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTaa < 2:278134/134‑1 (MQ=255) atcgTGCGAATCGTAATACAAGAGTCGATATTCCCGTCAAACCCAATGTAGGCAATACACCCTCCGTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAg > 1:315772/4‑139 (MQ=255) atcgTGCGAATCGTAATACAAGAGTCGATATTCCCGTCAAACCCAATGTAGGCAATACACCCTCCGTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAg > 2:113274/4‑139 (MQ=255) atcgTGCGAATCGTAATACAAGAGTCGATATTCCCGTCAAACCCAATGTAGGCAATACACCCTCCGTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAg > 3:224801/4‑139 (MQ=255) aacgTGCGAATCGTAATACAAGAGTCGATATTCCCGTCAAACCCAATGTAGGCAAAACACCCTCCGTTAGTCTCTATCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCAAGGCAAGGATTTTGGGTGAGCCTGTTAAAg > 6:68040/4‑139 (MQ=255) tcgTGCGAATCGTAATACAAGAGTCGATATTCCCGTCAAACCCAATGTAGGCAATACAACCTCCGTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTTCATGGCACGGATTTTGGGTGCGCCTGTTAAAGt > 7:99281/3‑139 (MQ=255) aTCGTAATACAAGAGTCGATATTCCCGTCAAACCCAATGTAGGCAATACACCCTCCGTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGAGCGCCTGTTAAAGTCCccgccg < 4:311337/139‑1 (MQ=255) tCGTAATACAAGAGTCGATATTCCCGTCAAACCCAATGTAGGCAATACACCCTCCGTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCccgc < 1:151000/136‑1 (MQ=255) tCGTAATACAAGAGTCGATATTCCCGTCAAACCCAATGTAGGCAATACACCCTCCGTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCccgc > 2:151000/1‑136 (MQ=255) gTACTACAAGAGTCGATATTCCCGTCAAACCCAATGTAGGCAATACACCCTCCGTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGa < 1:127651/139‑1 (MQ=255) cAAGAGTCGATATTCCCGTCAAACCCAATGTAGGCAATACACCCTCCGTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGAAAGca < 5:126789/138‑2 (MQ=255) aaGAGTCGATATTCCCGTCAAACCCAATGTAGGCAATACACCCTCCGTATGTCTCTCTCGGTGTTGGCTCGATTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGAAAGCAGa < 5:68040/139‑1 (MQ=255) aaGAGTCGATATTCCCGTCAAACCCAATGTAGGCAATACACCCTCCGTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGAAAGCAGa > 3:443720/1‑139 (MQ=255) gagTCGATATTCCCGTCAAACCCAATGTAGGCAATACACCCTCCGTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCCAGGATTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGAAAGcacaca > 7:187590/1‑134 (MQ=255) gagTCGATATTCCCGTCAAACCCAATGTAGGCAATACACCCTCCGTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGAAAGCAGACa > 5:426966/1‑139 (MQ=255) tCGATATTCCCGTCAAACCCAATGTAGGCAATACACCCTCCGTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGAAAGCAGACAt > 8:403940/1‑137 (MQ=255) gATATTCCCGTCAAACCCAATGTAGGCAATACACCCTCCGTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGAGTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGAAAAGCAGACATCAGt > 5:201113/1‑139 (MQ=255) tatTCCCGTCAAACCCAATGTAGGCAATACACCCTCCGTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGc < 6:426966/139‑1 (MQ=255) tatTCCCGTCAAACACAATGTAGGCAATACACCCTCCGTATGGCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGc < 8:99281/139‑1 (MQ=255) atTCCCGTCAAAACCAATGTAGGCAATTCACCCTCCGTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGc < 2:96324/138‑1 (MQ=255) ccGTCAAACCCAATGTAGGCAATACACCCTCCGTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGa < 7:419910/139‑1 (MQ=255) cGTCAAACCCAATGTAGGCAATACACCCTCCGTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGa > 1:74844/1‑138 (MQ=255) tCAAACCCAATGTAGGCAATACACCCTCCGTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCa > 8:233717/1‑78 (MQ=255) tCAAACCCAATGTAGGCAATACACCCTCCGTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCa < 7:233717/78‑1 (MQ=255) tCAAACCCAATGTAGGCAATACACCCTCCGTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAg > 4:261082/1‑139 (MQ=255) | TATTACAGCTTTCTTCGTATTCGGCTTCCGGAACAGAATCCGCAACAATTCCAGCACCTGCCTGTATCGATGCAACACCGTTCTTTACGCTCATGGTGCGAATCGTAATACAAGAGTCGATATTACCGTCAAATCCGATGTAGGCGATACAGCCGCCGTATGTCTCTCTCGGTGTTGGCTCGAGCTCTTGCAAAAGCTGCATAGCACGGATTTTTGGAGCGCCTGTTAAAGTTCCCGCCGGGAAAGCGGACATCAGTGCATCGACAG > CP006881/2193832‑2194098 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |