| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP006881 | 2,194,064 | T→C | G406G (GGA→GGG) | U712_10995 ← | Anthranilate synthase component 1 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 2,194,064 | 0 | T | C | 99.0% | 320.5 / NA | 99 | G406G (GGA→GGG) | U712_10995 | Anthranilate synthase component 1 |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (53/45); minor base A (0/1); total (53/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.65e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
ATCGTAATACAAGAGTCGATATTACCGTCAAATCCGATGTAGGCGATACAGCCGCCGTATGTCTCTCTCGGTGTTGGCTCGAGCTCTTGCAAAAGCTGCATAGCACGGATTTTTGGAGCGCCTGTTAAAGTTCCCGCCGGGAAAGCGGACATCAGTGCATCGACAGGGTGAACCCCTTCTTTCAATCGGCCTGTAACCACCGAAATAATGTGCATGACATGCGAAAAGGAGACAATTTTTGTGAACTCCGGCACAGAAACAGATCCA > CP006881/2193933‑2194199 | aTCGTAATACAAGAGTCGATATTCCCGTCAAACCCAATGTAGGCAATACACCCTCCGTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGAGCGCCTGTTAAAGTCCccgccg < 4:311337/139‑1 (MQ=255) tCGTAATACAAGAGTCGATATTCCCGTCAAACCCAATGTAGGCAATACACCCTCCGTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCccgc < 1:151000/136‑1 (MQ=255) tCGTAATACAAGAGTCGATATTCCCGTCAAACCCAATGTAGGCAATACACCCTCCGTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCccgc > 2:151000/1‑136 (MQ=255) gTACTACAAGAGTCGATATTCCCGTCAAACCCAATGTAGGCAATACACCCTCCGTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGa < 1:127651/139‑1 (MQ=255) cAAGAGTCGATATTCCCGTCAAACCCAATGTAGGCAATACACCCTCCGTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGAAAGca < 5:126789/138‑2 (MQ=255) aaGAGTCGATATTCCCGTCAAACCCAATGTAGGCAATACACCCTCCGTATGTCTCTCTCGGTGTTGGCTCGATTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGAAAGCAGa < 5:68040/139‑1 (MQ=255) aaGAGTCGATATTCCCGTCAAACCCAATGTAGGCAATACACCCTCCGTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGAAAGCAGa > 3:443720/1‑139 (MQ=255) gagTCGATATTCCCGTCAAACCCAATGTAGGCAATACACCCTCCGTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCCAGGATTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGAAAGcacaca > 7:187590/1‑134 (MQ=255) gagTCGATATTCCCGTCAAACCCAATGTAGGCAATACACCCTCCGTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGAAAGCAGACa > 5:426966/1‑139 (MQ=255) tCGATATTCCCGTCAAACCCAATGTAGGCAATACACCCTCCGTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGAAAGCAGACAt > 8:403940/1‑137 (MQ=255) gATATTCCCGTCAAACCCAATGTAGGCAATACACCCTCCGTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGAGTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGAAAAGCAGACATCAGt > 5:201113/1‑139 (MQ=255) tatTCCCGTCAAACCCAATGTAGGCAATACACCCTCCGTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGc < 6:426966/139‑1 (MQ=255) tatTCCCGTCAAACACAATGTAGGCAATACACCCTCCGTATGGCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGc < 8:99281/139‑1 (MQ=255) atTCCCGTCAAAACCAATGTAGGCAATTCACCCTCCGTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGc < 2:96324/138‑1 (MQ=255) ccGTCAAACCCAATGTAGGCAATACACCCTCCGTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGa < 7:419910/139‑1 (MQ=255) cGTCAAACCCAATGTAGGCAATACACCCTCCGTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGa > 1:74844/1‑138 (MQ=255) tCAAACCCAATGTAGGCAATACACCCTCCGTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAg > 4:261082/1‑139 (MQ=255) ccaaTGTAGGCAATACACCCTCCGTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGaa < 3:69981/136‑1 (MQ=255) aTGTAGGCAATACACCCTCCGTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGAAAGca < 5:77890/111‑2 (MQ=255) aTGTAGGCAATACACCCTCCGTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGAAAGca > 6:77890/1‑110 (MQ=255) ggCAATACACCCTCCGTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCctttt < 8:198454/139‑3 (MQ=255) gcaaTACACCCTCCGTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCcttttt > 2:354540/4‑139 (MQ=255) caaTACACCCTCCGTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCtttttt > 2:43422/3‑139 (MQ=255) tACACCCTCCGTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCaa > 6:97406/1‑139 (MQ=255) tACACCCTCCGTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCaa > 4:222598/1‑139 (MQ=255) tACACCCTCCGTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCa > 2:343620/1‑138 (MQ=255) caccctccgTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAAt < 7:403940/132‑1 (MQ=255) cctccgTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGAAAGCAGCCATCAGTGCATCGACAGGATGCACCCCTTTTTTCAATCGGc > 2:214442/4‑139 (MQ=255) cctccgTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGAAAGCAGACATc < 7:215473/99‑1 (MQ=255) cctccgTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGAAAGCAGACATc > 8:215473/4‑102 (MQ=255) cctccgTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGc > 3:44880/4‑139 (MQ=255) cctccgTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGc > 3:381535/4‑139 (MQ=255) cctccgTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGc > 1:17127/4‑139 (MQ=255) ctccgTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCGTTTTTCAATCGGcc > 1:310395/3‑139 (MQ=255) tccgTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGAATCGACAGGATGACCCCCGTTTTTCAAACGGCCt > 5:58738/2‑139 (MQ=255) tccgTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAATGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCt > 4:444953/2‑139 (MQ=255) ccgTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTg > 7:140055/1‑139 (MQ=255) ccgTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTg > 1:432222/1‑139 (MQ=255) ccgTATGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTg > 1:275652/1‑139 (MQ=255) tGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAac < 2:74844/138‑1 (MQ=255) tGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAac > 2:323163/1‑138 (MQ=255) tGTCTCTCTCGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAac < 2:352051/138‑1 (MQ=255) tctctctcGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAaccac < 4:44880/139‑1 (MQ=255) tctctctcGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAacca < 1:343620/138‑1 (MQ=255) tctctctcGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAacca < 1:43422/138‑1 (MQ=255) tctctctcCGGGTTGGCTCGTGTTCTTGCAAAACCTGCATGGCACGGATTATGGGTGCGCCTGTTATAGTCCCCGCCGGGAAAGCAGACATCATTGCTACGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAacca < 4:101555/138‑1 (MQ=255) tctctatcGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCACCGCCGGGAAAGAAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCCGCCTGTAaccac > 2:252186/1‑139 (MQ=255) tctctcGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAaccacc > 6:358531/1‑138 (MQ=255) ctctcGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGCGCGCCTGTTAAAGTCCCCGCCGGGaa < 7:429995/79‑1 (MQ=255) ctctcGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGAGCGCCTGTTAAAGTCCCCGCCGGGaa > 8:429995/1‑79 (MQ=255) tctcGGTGTTGGGTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGTCAGGATGATCCCCTTTTTTCAATCGGCCTGTAACCACCg < 1:252186/137‑1 (MQ=255) tctcGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGa < 1:236231/77‑1 (MQ=255) tctcGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGa > 2:236231/1‑77 (MQ=255) tctcGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAaccacc > 7:160584/1‑136 (MQ=255) tctcGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAaccacc > 6:244688/1‑136 (MQ=255) tctcGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAaccacc > 2:365143/1‑136 (MQ=255) tctcGGTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCg < 4:224801/137‑1 (MQ=255) tctcGGTGTTGGCTCGAGTTCTTGCAAAAGCAGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAaccacc > 6:106060/1‑136 (MQ=255) ggTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAgata < 2:315772/138‑1 (MQ=255) ggTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAgata < 5:170769/138‑1 (MQ=255) ggTGTTGGCTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGAAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAgata < 6:201113/138‑1 (MQ=255) ggTGTGTGCGCGAGTTCTTGCAAAAGCTGCATGGCACGGATTGTGGGTGCTCCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAgata < 3:11965/138‑1 (MQ=255) cTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGa < 2:80371/126‑1 (MQ=255) cTCGAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGa > 1:80371/1‑126 (MQ=255) gAGTTCTTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGa < 5:358531/137‑1 (MQ=255) agttctTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACAt > 8:441556/4‑139 (MQ=255) agttctTGCAAAAGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACAt > 4:205404/4‑139 (MQ=255) gCAAAAGCTGCATGGCAAGGATTTTGGGTGCGACTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTCTAACCACCGAGATAATGTGCATGACATGTGaa > 1:158750/1‑137 (MQ=255) aGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGgaaa > 7:131278/1‑137 (MQ=255) gCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAAc < 1:323163/139‑1 (MQ=255) cATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACAACCGAGATAATGTGCATGACATGTGAAAAGGAAACAAtt > 6:394070/1‑139 (MQ=255) aTTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACt > 8:422036/1‑139 (MQ=255) tgcgcCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGcaca < 1:344646/138‑1 (MQ=255) cgcCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAAt > 3:211159/1‑68 (MQ=255) cgcCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAAt < 4:211159/68‑1 (MQ=255) cgcCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATTGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAg > 1:292307/1‑138 (MQ=255) cgcCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAATGGAAACATTTTTTGTGAACTCCGGCACAg > 7:416202/1‑138 (MQ=255) cgcCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAg > 1:345262/1‑138 (MQ=255) cgcCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAg > 1:322095/1‑138 (MQ=255) cgcCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAg > 5:358708/1‑138 (MQ=255) cgcCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAg > 7:145927/1‑138 (MQ=255) cgcCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAg > 2:171106/1‑138 (MQ=255) cgcCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAg > 7:240689/1‑138 (MQ=255) cgcCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAg > 3:279408/1‑138 (MQ=255) ccTGTTAACGGCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGAAGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGaaa < 8:187590/139‑1 (MQ=255) ccTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCTGCACAGaaa < 1:354540/139‑1 (MQ=255) ccTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGaaa < 7:72339/139‑1 (MQ=255) ccTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGaaa < 5:421316/139‑1 (MQ=255) ccTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGaaa > 1:341593/1‑139 (MQ=255) ccTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGaaa < 3:67416/139‑1 (MQ=255) ccTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGaaa < 4:381535/139‑1 (MQ=255) ccTGTTAAAGGCCCCGCCGGGAAAGCCGACATCAGGGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGaaa < 6:58738/139‑1 (MQ=255) ttAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAgata < 2:378746/83‑1 (MQ=255) ttAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAgata > 1:378746/1‑83 (MQ=255) ttAAAGTACCCGCCGTGAAAGAAGACATCATTGCATAGACAGGATGAACCACTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGAAACa < 4:279408/137‑1 (MQ=255) ttAAAGGCCCCGCCGGGAAAGCAGACATCAGTGCATCGCCTGGATGAACCCCTTTTTTCAATCGCCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGAAACa < 7:222186/137‑1 (MQ=255) aGTCCCCGCCGTGAAAGCAGACCTCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGAAACAGAACCa < 8:436215/139‑1 (MQ=255) aGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGAAACAGAACCa < 3:218714/139‑1 (MQ=255) aGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGAAACAGAACCa < 4:443720/139‑1 (MQ=255) | ATCGTAATACAAGAGTCGATATTACCGTCAAATCCGATGTAGGCGATACAGCCGCCGTATGTCTCTCTCGGTGTTGGCTCGAGCTCTTGCAAAAGCTGCATAGCACGGATTTTTGGAGCGCCTGTTAAAGTTCCCGCCGGGAAAGCGGACATCAGTGCATCGACAGGGTGAACCCCTTCTTTCAATCGGCCTGTAACCACCGAAATAATGTGCATGACATGCGAAAAGGAGACAATTTTTGTGAACTCCGGCACAGAAACAGATCCA > CP006881/2193933‑2194199 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |