| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP006881 | 2,194,154 | C→T | S376S (TCG→TCA) | U712_10995 ← | Anthranilate synthase component 1 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 2,194,154 | 0 | C | T | 98.9% | 291.3 / NA | 94 | S376S (TCG→TCA) | U712_10995 | Anthranilate synthase component 1 |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (45/48); minor base A (0/1); total (45/49) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GCAAAAGCTGCATAGCACGGATTTTTGGAGCGCCTGTTAAAGTTCCCGCCGGGAAAGCGGACATCAGTGCATCGACAGGGTGAACCCCTTCTTTCAATCGGCCTGTAACCACCGAAATAATGTGCATGACATGCGAAAAGGAGACAATTTTTGTGAACTCCGGCACAGAAACAGATCCATACTCTGCTACTCTGCCAATATCGTTCCGGGCAAGGTCAACGAGCATGTAGTGCTCCGCTTTTTCTTTTTCATCCTTCATCAGCTCA > CP006881/2194021‑2194286 | gCAAAAGCTGCATGGCAAGGATTTTGGGTGCGACTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTCTAACCACCGAGATAATGTGCATGACATGTGaa > 1:158750/1‑137 (MQ=255) aGCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGgaaa > 7:131278/1‑137 (MQ=255) gCTGCATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAAc < 1:323163/139‑1 (MQ=255) cATGGCACGGATTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACAACCGAGATAATGTGCATGACATGTGAAAAGGAAACAAtt > 6:394070/1‑139 (MQ=255) aTTTTGGGTGCGCCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACt > 8:422036/1‑139 (MQ=255) tgcgcCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGcaca < 1:344646/138‑1 (MQ=255) cgcCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATTGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAg > 1:292307/1‑138 (MQ=255) cgcCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAATGGAAACATTTTTTGTGAACTCCGGCACAg > 7:416202/1‑138 (MQ=255) cgcCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAg > 3:279408/1‑138 (MQ=255) cgcCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAg > 5:358708/1‑138 (MQ=255) cgcCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAg > 2:171106/1‑138 (MQ=255) cgcCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAg > 7:145927/1‑138 (MQ=255) cgcCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAg > 1:345262/1‑138 (MQ=255) cgcCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAg > 1:322095/1‑138 (MQ=255) cgcCTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAg > 7:240689/1‑138 (MQ=255) ccTGTTAACGGCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGAAGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGaaa < 8:187590/139‑1 (MQ=255) ccTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCTGCACAGaaa < 1:354540/139‑1 (MQ=255) ccTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGaaa > 1:341593/1‑139 (MQ=255) ccTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGaaa < 7:72339/139‑1 (MQ=255) ccTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGaaa < 5:421316/139‑1 (MQ=255) ccTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGaaa < 4:381535/139‑1 (MQ=255) ccTGTTAAAGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGaaa < 3:67416/139‑1 (MQ=255) ccTGTTAAAGGCCCCGCCGGGAAAGCCGACATCAGGGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGaaa < 6:58738/139‑1 (MQ=255) ttAAAGTACCCGCCGTGAAAGAAGACATCATTGCATAGACAGGATGAACCACTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGAAACa < 4:279408/137‑1 (MQ=255) ttAAAGGCCCCGCCGGGAAAGCAGACATCAGTGCATCGCCTGGATGAACCCCTTTTTTCAATCGCCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGAAACa < 7:222186/137‑1 (MQ=255) aGTCCCCGCCGTGAAAGCAGACCTCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGAAACAGAACCa < 8:436215/139‑1 (MQ=255) aGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGAAACAGAACCa < 3:218714/139‑1 (MQ=255) aGTCCCCGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGAAACAGAACCa < 4:443720/139‑1 (MQ=255) tccccGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGAAACAGAACCAta < 1:113274/137‑1 (MQ=255) tccccGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGAAACAGAACCAta < 2:345262/137‑1 (MQ=255) tccccGCCGGGAAAGCAGACATCAATGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGAAACAGAACCAta < 3:444953/137‑1 (MQ=255) cccGCCGGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGAAACAGAACCAta < 5:244688/137‑1 (MQ=255) cgccgGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCTGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGAAACAGAACCAtactct > 1:164699/1‑139 (MQ=255) cgccgGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCCTGACATGTGATAAGGAAACAATTTTTGTGAACTCCGGCACAGAAACAGACCCAtactct > 1:189173/1‑139 (MQ=255) cgccgGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGAAACAGAACCa > 6:346171/1‑133 (MQ=255) cgccgGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGAAACAGAACCa < 5:346171/133‑1 (MQ=255) cgccgGGAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGAAACAGAACCAtactct > 3:214434/1‑139 (MQ=255) gAAAGCAGACATCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGAAACAGAACCAtactctgctact > 5:162521/1‑139 (MQ=255) aTCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTtgtg > 4:313222/1‑93 (MQ=255) aTCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTtgtg < 3:313222/93‑1 (MQ=255) aTCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGAAACa < 8:236022/111‑1 (MQ=255) aTCAGTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGAAACa > 7:236022/1‑111 (MQ=255) gTGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGAAACAGAACCATACTCTGCTACTCTGCCGATATCGtt < 3:261082/139‑1 (MQ=255) tGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGAGATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGaaa < 5:210746/104‑1 (MQ=255) tGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGaaa > 6:210746/1‑104 (MQ=255) tGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGAAACAGAACCa < 8:265720/112‑1 (MQ=255) tGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGAAACAGAACCa > 7:265720/1‑112 (MQ=255) tGCATCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGAAACAGAACCATACTCTGCTACTCTGCCGATATCGttt > 3:363945/1‑138 (MQ=255) tCGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGAAACAGAACCATACTCTGCTACTCTGCCGATATCGTTTCggg < 3:205404/139‑1 (MQ=255) cGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGAACCAGAACAATACTCTGCTACTCTGCCGATAGCGTTTCggg > 6:381938/1‑138 (MQ=255) cGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGAAACa < 4:69488/101‑1 (MQ=255) cGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGAAACa > 3:69488/1‑101 (MQ=255) cGACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGAAACAGAACCATACTCTGCTACTCTGCCGATATCGTTTCGGGc < 7:422036/139‑1 (MQ=255) gACAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGAAACAGAACCATACTCTGCTACTCTGCCGATATCGTTTCGGGCa < 1:365143/139‑1 (MQ=255) gACAGGAAGAACCCCTTTTTTCAATCGGCCTGGAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGAAACAGAACCATACTCTGCTACTCTGCCGATATCGTTTCGGGCa < 2:432222/139‑1 (MQ=255) aCAGGATGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGAAACAGAACCATACTCTGCTACTCTGCCGATATCGTTTCGGGc > 3:15904/1‑137 (MQ=255) ggatGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGAAACa > 3:2514/4‑96 (MQ=255) ggatGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGAAACa < 4:2514/93‑1 (MQ=255) ggatGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGAAACAGAACCATACTCTGCTACTCTGCCGATATCGTTTCGGGc > 4:418785/4‑134 (MQ=255) tGAACCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGTACTCCGGCACAGAAACAGAACCATACTCTGCTACTCTGCCGATATCGTTTCGGGCAAGATCaa < 2:158750/139‑1 (MQ=255) aCCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGAAACAGAACCATACTCTGCTACTCTGCCGATATCGTTTCGGGCAAGATCAACGa < 8:160584/139‑1 (MQ=255) aCCCCTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGAAACAGAACCATACTCTGCTACTCTGCCGATATCGTTTCGGGCAAGATCAACGa < 4:157379/139‑1 (MQ=255) cccTTTTTTCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGAAACAGAACCATACTCTGCTACTCTGCCGATATCGTTTCGGGCAAGATCAACGAGc < 2:275652/139‑1 (MQ=255) ttttttCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGAAACAGAACCATACTCTGCTACTCTGCCGATATCGTTTCGGGCAAGATCAACGAGCATg > 4:239506/4‑139 (MQ=255) ttttttCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGAAACAGAACCATACTCTGCTACTCTGCCGATATCGTTTCGGGCAAGATCAACGAGCATg > 6:381501/4‑139 (MQ=255) ttttCAATCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGAAACAGAACCATACTCTGCTACTCTGCCGATATCGTTTCGGGCAAGATCAACGAGCATg < 5:381501/136‑1 (MQ=255) tCAATCGGCCTGTAACCCCCGAGATAATGTGCATGACAGGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGAAACAGATCCATACTCTGCTACTCTGCCGATATCGTTTCGGGCAAGATCAACGAGCATGTAATg > 8:178661/1‑139 (MQ=255) aaTCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGAAACAGAACCATACTCTGCTACTCTGCCGATATCGTTTCGGGCAAGATCAACGAGCATGTAATGCt > 4:148850/1‑139 (MQ=255) tCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGAAACAGAACCATACTCTGCTACTCTGCCGATATCGTTTCGGGCAAGATCAACGa < 7:33992/125‑1 (MQ=255) tCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGAAACAGAACCATACTCTGCTACTCTGCCGATATCGTTTCGGGCAAGATCAACGa > 8:33992/1‑125 (MQ=255) tCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGAAACAGAACCATACTCTGCTACTCTGCCGATATCGTTTCGGGCAAGATCAACGAGCATGTAATGCTcc > 7:144396/1‑139 (MQ=255) tCGGCCTGTAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGAAACAGAACCATACTCTGCTACTCTGCCGATATCGTTTCGGGCAAGATCAACGAGCATGTAATGCTcc > 8:356627/1‑139 (MQ=255) tAACCACCGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGAAACAGAACCATACTCTGCTACTCTGCCGATATCGTTTCGGGCAAGATCAACGAGCATGTAATGCTCCGcttttt < 2:292307/138‑1 (MQ=255) accGAGTTAATGTGCATGACATGAGAAAAGGAAACAATTTTTGTGAACTCCTGCACAGAAACAGAACCATACTCTGCTACTCTGCCGATATCGTTTCGGGCAAGATCAACGAGCATGTAATGCTCCGctttttcttttt < 5:106060/139‑1 (MQ=255) accGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGAAACAGAACCATACTCTGCTACTCTGCCGATATCGTTTCGGGCAAGATCAACGAGCATGTAATGCTCCGctttttcttttt > 1:301596/1‑139 (MQ=255) ccGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGaaa > 7:154183/1‑60 (MQ=255) ccGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGaaa < 8:154183/60‑1 (MQ=255) ccGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGAAACAGAACCAtactctg < 3:413343/75‑1 (MQ=255) ccGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGAAACAGAACCAtactctg > 4:413343/1‑75 (MQ=255) cGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGAAACAGAACCATACTCTGCTACTCTGCCGATATCGTTTCGGGCAAGATCAACg > 7:361051/1‑109 (MQ=255) cGAGATAATGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGAAACAGAACCATACTCTGCTACTCTGCCGATATCGTTTCGGGCAAGATCAACg < 8:361051/109‑1 (MQ=255) gagataatGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGAAACAGAACCATACTCTGCTACTCTGCCGATATCGTTTCGGGCAAGATCAACGAGCATGTAATGCTCCGCTTTTTCTTTTTCAt < 1:171106/136‑1 (MQ=255) aatGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGAAACAGAACCAta > 1:258766/1‑63 (MQ=255) aatGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGAAACAGAACCAta < 2:258766/63‑1 (MQ=255) atGTGCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGAAACAGAACCATACTCTGCTACTCTGCCGATATCGTTTCGGGCAAGATCAACGAGCATGTAATGCTCCGCTTTTTCTTTTTCATCCTtca < 5:97406/139‑1 (MQ=255) tgtgCATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGAAACAGAACCATACTCTGCTACTCTGCCGATATCGTTTCGGGCAAGATCAACGAGCATGTAATGCTCCGCTTTTTCTTTTTCATCCTtcat < 2:341593/139‑1 (MQ=255) cctGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGAAACAGAACCATACTCTGCTACTCTGCCGATATCGTTTCGGGCAAGATCAACGAGCATGTAATGCTCCGCTTTTTCTTTTTCATCCTTCATGAGc < 2:322095/137‑1 (MQ=255) cATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGAAACAGAACCATACTCTGCTACTCTGCCGATATCGTTTCGGGCAAGATCAACGAGCATGTAATGCTCCGCTTTTTCTTTTTCATCCTTCATGAGc > 7:362887/1‑139 (MQ=255) cATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGAAACAGAACCATACTCTGCTACTCTGCCGATATCGTTTCGGGCAAGATCAACGAGCATGTAATGCTCCGCTTTTTCTTTTTCATCCTTCATGAGc > 7:51741/1‑139 (MQ=255) cATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGAAACAGAACCATACTCTGCTACTCTGCCGATATCGTTTCGGGCAAGATCAACGAGCATGTAATGCTCCGCTTTTTCTTTTTCATCCTTCATGAGc > 7:236253/1‑139 (MQ=255) cATGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGAAACAGAACCATACTCCGCTACTCTGCCGATATCGTTTCGGGCAAGACCAACGAGCATGTAATGCTCCGCTTTTTCTTTTTCATCCTTCATGAGc > 7:210069/1‑139 (MQ=255) tGACATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGAAACAGAACCATACTCTGCTACTCTGCCGATATCGTTTCGGGCAAGATCAACGAGCATGTAATGCTCCGCTTTTTCTTTTTCATCCTTCATGAGCTc < 3:239506/139‑1 (MQ=255) aCATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGAAACAGAACCATACTCTGCTACTCTGCCGATATCGTTTCGGGCAAGATCAACGAGCATGTAATGCTCCGCTTTTTCTTTTTCATCCTTCATGAGCTCa < 6:358708/138‑1 (MQ=255) aCATGTGAAAAGGAAACAATTTTTGTGAACTCCGGCACAGAAACAGAACCATACTCTGCTACTCTGCCGATATCGTTTCGGGCAAGATCAACGAGCATGTAATGCTCCGCTTTTTCTTTTTCATCCTTCATGAGCTCa < 3:148850/138‑1 (MQ=255) | GCAAAAGCTGCATAGCACGGATTTTTGGAGCGCCTGTTAAAGTTCCCGCCGGGAAAGCGGACATCAGTGCATCGACAGGGTGAACCCCTTCTTTCAATCGGCCTGTAACCACCGAAATAATGTGCATGACATGCGAAAAGGAGACAATTTTTGTGAACTCCGGCACAGAAACAGATCCATACTCTGCTACTCTGCCAATATCGTTCCGGGCAAGGTCAACGAGCATGTAGTGCTCCGCTTTTTCTTTTTCATCCTTCATCAGCTCA > CP006881/2194021‑2194286 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |