| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP006881 | 2,194,559 | T→G | I241I (ATA→ATC) | U712_10995 ← | Anthranilate synthase component 1 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 2,194,559 | 0 | T | G | 98.8% | 265.0 / ‑5.4 | 83 | I241I (ATA→ATC) | U712_10995 | Anthranilate synthase component 1 |
| Reads supporting (aligned to +/- strand): ref base T (1/0); new base G (50/32); total (51/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.86e-01 | |||||||||||
ATACATATACGGAGAAGGATTGACGATCCTAAGCACCCGGTATAACTCAAAGGCATCTGATTTTATCGGAATCTCAAATTTTTGTGACAGAACGCCTTGGAAGATATCGCCCGCTTTTATATATTCTTTTATTTTTTCTACATCAGCCATAAAGGCTGGTTTTTCATAATTAGAAGATACTGTCTCAAAGCTGGGTGTCTTATATGAATCAGCAGAAAGAAACAGTTCTTTTATGTTTTTTTGATCCATCATTTTTTCTATGA > CP006881/2194430‑2194692 | ataCATATACGGCGAAGGATTGACGATCCTAAGCACTCGGTATAACTCAAAAGCATCTGCTTTTATCGGCACCTCAAATTTTTGTGATAAAACACCCTGGAAGATATCGACTGCTTTTATATAGCTTTTGATTTTTTc > 5:334050/1‑138 (MQ=255) taCATATACGGCGAAGGATTGACGATCCTAAGCACTCGGTATAACTCAAAAGCATCTGCTTTTATCGGCACCTCAAATTTTTGTGATAAAACACCCTGGAAGATATCGCCTGCTTTTATATAGCTTTTGATTTTTTCt > 3:304310/1‑138 (MQ=255) taCATATACGGCGAAGGATTGACGATCCTAAGCACTCGGTATAACTCAAAAGCATCTGCTTTTATCGGCACCTCAAATTTTTGTGATAAAACACCCTGGAAGATATCGCCTGCTTTTATATAGCTTTTGATTTTTTCTa > 1:17997/1‑139 (MQ=255) taCATATACGGCGAAGGATTGACGATCCTAAGCACTCGGTATAACTCAAAAGCATCTGCTTTTATCGGCACCTCAAATTTTTGTGATAAAACACCCTGGAAGATATCGCCTGCTTTTATATAGCTTTTGATTTTTTCTa > 1:238672/1‑139 (MQ=255) taCATATACGGCGAAGGATTGACGATCCTAAGCACTCGGTATAACTCAAAAGCATCTGCTTTTATCGGCACCTCAAATTTTTGTGATAAAACACCCTGGAAGATATCGCCTGCTTTTATATAGCTTTTGATTTTTTCTa > 3:147970/1‑139 (MQ=255) taCATATACGGCGAAGGATTGACGATCCTAAGCACTCGGTATAACTCAAAAGCATCTGCTTTTATCGGCACCTCAAATTTTTGTGATAAAACACCCTGGAAGATATCGCCTGCTTTTATATAGCTTTTGATTTTTTCTa > 7:75870/1‑139 (MQ=255) ataCGGCGAAGGATTGACGATCCTAAGCACTCGGTATAACTCAAAAGCATCTGCTTTTATCGGCACCTCAAATTTTTGTGATAAAACACCCTGGAAGATATCGCCTGCTTTTATATAGCTTTTGATTTTTTCTACAt > 2:280430/1‑137 (MQ=255) taCGGAGAAGGATTGACGATCCTAAGCACTCGGTATAACTCAAAAGCATCTGCTTTTATCGGCACCTCAAATTTTTGTGATAAAACACCCTGGAAGATATCGCCTGCTTTTATATAGCTTTTGATTTTTTCTACATcct < 3:233284/139‑3 (MQ=255) gcgaAGGATTGACGATCCTAAGCACTCGGTATAACTCAAAAGCATCTGCTTTTATCGGCACCTCAAATTTTTGTGATAAAACACCCTGGAAGATATCGCCTGCTTTTATATAGCTTTTGATTTTTTCTACATCAGCCa > 8:168646/3‑138 (MQ=255) gcgaAGGATTGACGATCCTAAGCACTCGGTATAACTCAAAAGCATCTGCTTTTATCGGCACCTCAAATTTTTGTGATAAAACACCCTGGAAGATATCGCCTGCTTTTATATAGCTGTTGATTTTTTCTACATCAGCCa > 6:106504/3‑138 (MQ=255) cgaAGGATTGACGATCCTAAGCACTCGGTATAACTCAAAAGCATCTGCTTTTATCGGCACCTCAAATTTTTGTGATAAAACACCCTGGAAGATATCGCCTGCTTTTATTTAGCTTTTGATTTTTTCTACATCAGCCAt > 8:222843/2‑138 (MQ=255) cgaAGGATTGACGATCCTAAGCACTCGGTATAACTCAAAAGCATCTGCTTTTATCGGCACCTCAAATTTTTGTGATAAAACACCCTGGAAGATATCGCCTGCTTTTATATAGCTTTTGATTTTTTCTACATCAGCCAt > 1:430501/2‑138 (MQ=255) cgaAGGATTGACGATCCTAAGCACTCGGTATAACTCAAAAGCATCTGCTTTTATCGGCACCTCAAATTTTTGGGATAAAACACCCTGGAAGATATCGCCTGCTTTTATATAGCTTTTGATTTTTTCTACATCAGCCAt > 3:239005/2‑138 (MQ=255) ggATTGACGATCCTAAGCACTCGGTATAACTCAAAAGCATCTGCTTTTATCGGCACCTCAAATTTTTGTGATAAAACACCCTGGAAGATATCGCCTGCTTTTATATAGCTTTTGATTTTTTCTACATCAGCCATaaaag > 7:200590/1‑137 (MQ=255) aCGATCCTAAGCACTCGGTATAACTCAAAAGCATCTGCTTTTATCGGCACCTCAAATTTTTGTGATAAAACACCCTGGAAGATATCGCCTGCTTTTATATAGCTTTTGATTTTTTCTACATCAGCCATAAAAGccgatt > 3:354680/1‑134 (MQ=255) aTCCTAAGCACTCGGTATAACTCAAAAGCATCTGCTTTTATCGGCACCTCAAATTTTTGTGATAAAACACCCTGGAAGATATCGCCTGCTTTTATATAGCTTTTGATTTTTTCTACATCAGCCATAAAAGCCGAttttt > 7:241328/1‑139 (MQ=255) ccTAAGCACTCGGTATAACTCAAAAGCATCTGCTTTTATCGGCACCTCAAATTTTTGTGATAAAACACCCTGGAAGATATCGCCTGCTTTTATATAGCTTTTGATTTTTTCTACATCAGCCATAAAAGCCGATTTTTCa > 3:212807/1‑139 (MQ=255) ccTAAGCACCCGGTATAACTCAAAGGCATCTGATTTTATCGGAATCTCAAATTTTTGTGACAGAACGCCTTGGAAGATATCGCCCGCTTTTATATATTCTTTTATTTTTTCTACATCAGCCATAAAGGCTGGTTTTTCa > 5:307581/1‑139 (MQ=255) cTAAGCTCTCGGTATAACTCAAAAGCATCTGCTTTTATCGGCACCTCATATTTTTGTGATAAAACACCCTGGAAGATATCGCCTTCTTTTATATAGCTTTTGATTTTTTCTACATCAGCCATAAAAGCCGATTTTTCAt < 1:413926/139‑1 (MQ=255) cTAAGCACTCGGTATAACTCAGAAGCATCTGCTTTATTCGGCACCTCAAAATTTTGTGATAAAACACCCTGGAAGATATCGCCTGCTTTTATATAGCTTTTGATTTTTTCTACATCAGCCATAAAAGCCGATTTTTCa < 4:238892/138‑1 (MQ=255) cTAAGCACTCGGTATAACTCAAAAGCATCTGCTTTTATCGGCACCTCAAATTTTTGTGATAAAACACCCTGGAAGATATCGCCTGCTTTTATATAGCTTTTGATTTTTTCTACATCAGCCATAAAAGCCGATTTTTCAt < 7:3618/139‑1 (MQ=255) cTAAGCACTCGGTATAACTCAAAAGCATCTGCTTTTATCGGCACCTCAAATTTTTGTGATAAAACACCCTGGAAGATATCGCCTGCTTTTATATAGCTTTTGATTTTTTCTACATCAGCCATAAAAGCCGATTTTTCAt < 1:280430/139‑1 (MQ=255) aGCACTCGGTATAACTCAAAAGCATCTGCTTTTATCGGCACCTCAAATTTTTGTGATAAAACACCCTGGAAGATATCGCCTGCTTTTATATAGCTTTTGATTTTTTCTACATCAGCCATAAAAGCCGATTTTTCATaa < 4:282304/138‑1 (MQ=255) aGCACTCGGTATAACTCAAAAGCATCTGCTTTTATCGGCACCTCAAATTTTTGTGATAAAACACCCTGGAAGATATCGCCTGCTTTTATATAGCTTTTGATTTTTTCTACATCAGCCATAAAAGCCGATTTTTCATaa < 3:192166/138‑1 (MQ=255) aGCACTCGGTATAACTCAAAAGCATCTGCTTTTATCGGCACCTCAAATTTTTGTGATAAAACACCCTGGAAGATATCGCCTGCTTTTATATAGCTTTTGATTTTTTCTACATCAGCCATAAAAGCCGATTTTTCATaa < 8:75870/138‑1 (MQ=255) aGCACTCGGTATAACTCAAAAGCATCTGCTTTTATCGGCACCTCAAATTTTTGTGATAAAACACCCTGGAAGATATCGCCTGCTTTTATATAGCTTTTGATTTTTTCTACATCAGCCATAAAAGCCGATTTTTCATaa < 5:95098/138‑1 (MQ=255) aGCACTCGGTATAACTCAAAAGCATCTGCTTTTATCGGCACCTCAAATTTTTGTGATAAAACACCCTGGAAGATATCGCCTGCTTTTATATAGCTGTTGATTTTTTCTACATCAGCCATAAAAGCCGATTTTTCATaa < 4:288171/138‑1 (MQ=255) ctcGGTATAACTCAAAAGCATCTGCTTTTATCGGCACCTCAAATTTTTGTGATAAAACACCCTGGAAGATATCGCCTGCTTTTATATAGCTTTTGATTTTTTCTACATCAGCCATAAAAGCCGATTTTTCATAATTaga < 2:75118/137‑1 (MQ=255) ctcGGTATAACTCAAAAGCATCTGCTTTTATCGGCACCTCAAATTTTTGTGATAAAACACCCTGGAAGATATCGCCTGCTTTTATATAGCTTTTGATTTTTTCTACATCAGCCATAAAAGCCGATTTTTCATAATTaga < 8:200590/137‑1 (MQ=255) tcGGTATAACTCAAAAGCATCTGCTTTTATCGGCACCTCAAATTTTTGTGATAAAACACCCTGGAAGATATCGCCTGCTTTTATATAGCTTTTGATTTTTTCTACATCAGCCATAAAAGCCGATTTTTCATAATTag > 8:369205/2‑137 (MQ=255) tcGGTATAACTCAAAAGCATCTGCTTTTATCGGCACCTCAAATTTTTGTGATAAAACACCCTGGAAGATATCGCCTGCTTTTATATAGCTTTTGATTTTTTCTACATCAGCCATAAAAGCCGATTTTTCATAATTag > 4:65584/2‑137 (MQ=255) tcGGTATAACTCAAAAGCATCTGCTTTTATCGGCACCTCAAATTTTTGTGATAAAACACCCTGGAAGATATCGCCTGCTTTTATATAGCTTTTGATTTTTTCTACATCAGCCATAAAAGCCGATTTTTCATAATTag > 4:184063/2‑137 (MQ=255) tcGGTATAACTCAAAAGCATCTGCTTTTATCGGCACCTCAAATTTTTGTGATAAAACACCCTGGAAGATATCGCCTGCTTTTATATAGCTTTTGACTTTTTCTACATCAGCCATAAAAGCCGATTTTTCATAATTag > 6:184858/2‑137 (MQ=255) ggTATAACTCAAAAGCATCTGCTTTTATCGGCACCTCAAATTTTTGTGATAAAACACCCTGGAAGATATCGCCTGCTTTTATATAGCTTTTGATTTTTTCTACATCAGCCATAAAAGCCGATTTTTCATAATTagaaga < 4:304310/139‑1 (MQ=255) ggTATAACTCAAAAGCATCTGCTTTTATCGGCACCTCAAATTTTTGTGATAAAACACCCTGGAAGATATCGCCTGCTTTTATATAGCTTTTGATTTTTTCTACATCAGCCATAAAAGCCGATTTTTCATAATTag > 3:60680/1‑135 (MQ=255) tataACTCAAAAGCATCTGCTTTTATCGGCACCTCAAATTTTTGTGATAAAACACCCTGGAAGATATCGCCTGCTTTTATATAGCTTTTGATTTTTTCTACATCAGCCATAAAAGCCGATTTTTCATAATTAGAAGATa > 4:277760/1‑139 (MQ=255) taACTGAAAATCATCTTCTTTTATCGGCACCTCAAATTTTTGTGATAAAACACGCTGGAAGATATCGACTGCTTTTATATAGCTTTTGATTTTTTCTACATCAGCCATAAAAGCCGATTTTTCATAATTAGAAGATAc < 8:421299/138‑1 (MQ=255) taACTCAAAAGCATCTGCTTTTATCGGCACCTCAAATTTTTGTGATAAAACACCCTGGAAGATATCGCCTGCTTTTATATAGCTTTTGATTTTTTCTACATCAGCCATAAAAGCCGATTTTTCATAATTAGAAGATAc < 7:168646/138‑1 (MQ=255) cTCAAAAGCATCTGCTTTTATCGGCACCTCAAATTTTTGTGATAAAACACCCTGGAAGATATCGCCTGCTTTTATATAGCTTTTGATTTTTTCTACATCAGCCATAAAAGCCGATTTTTCATAATTAGAAGATACTGtc > 8:366384/1‑139 (MQ=255) cTCAAAAGCATCTGCTTTTATCGGCACCTCAAATTTTTGTGATAAAACACCCTGGAAGATATCGCCTGCTTTTATATAGCTTTTGATTTTTTCTACATCAGCCATAAAAGCCGATTTTTCATAATTAGAAGATACTGtc > 8:314623/1‑139 (MQ=255) cTCAAAAGCATCTGCTTTTATCGGCACCTCAAATTTTTGTGATAAAACACCCTGGAAGATATCGCCTGCTTTTATATAGCTTTTGATTTTTTCTACATCAGCCATAAAAGCCGATTTTTCATAATTAGAAGATACTGtc > 6:431863/1‑139 (MQ=255) aaaaGCATCTGCTTTTATCGGCACCTCAAATTTTTGTGATAAAACACCCTGGAAGATATCGCCTGCTTTTATATAGCTTTTGATTTTTTGTACATCAGCCATAAAAGCCGATTTTTCATAATTAGAAGATACTGTCTCa < 4:334737/139‑1 (MQ=255) aaaaGCATCTGCTTTTATCGGCACCTCAAATTTTTGTGATAAAACACCCTGGAAGATATCGCCTGCTTTTATATAGCTTTTGATTTTTTCTACATCAGCCATAAAAGCCGATTTTTCATAATTAGAAGATACTGtctc > 2:354099/1‑138 (MQ=255) aaaaGCATCTGCTTTTATCGGCACCTCAAATTTTTGTGATAAAACACCCTGGAAGATATCGCCTGCTTTTATATAGCTTTTGATTTTTTCTACATCAGCCATAAAAGCCGATTTTTCATAATTAGAAGATACTGtct < 8:313820/137‑1 (MQ=255) aagCATCTGCTTTTATCGGCACCTCAAATTTTTGTGATAAAACACCCTGGAAGATATCTCCTGCTTTTATATAGCTTTTGATTTTTTCTACATCAGCCATAAAAGCCGATTTTTCATAATTAGAAGATACTGTCTCa > 8:109156/3‑137 (MQ=255) aagCATCTGCTTTTATCGGCACCTCAAATTTTTGTGATAAAACACCCTGGAAGATATCGCCTGCTTTTATATAGCTTTTGATTTTTTCTACATCAGCCATAAAAGCCGATTTTTCATAATTAGAAGATACTGTCTCaa > 4:6844/3‑138 (MQ=255) aagCATCTGCTTTTATCGGCACCTCAAATTTTTGTGATAAAACACCCTGGAAGATATCGCCTGCTTTTATATAGCTTTTGATTTTTTCTACATCAGCCATAAAAGCCGATTTTTCATAATTAGAAGATACTGTCTCa > 1:19554/3‑137 (MQ=255) aagCATCTGCTTTTATCGGCACCTCAAATTTTTGTGATAAAACACCCTGGAAGATATCGCCTGCTTTTATATAGCTTTTGATTTTTTCTACATCAGCCATAAAAGCCGATTTTTCATAATTAGAAGATACTGTCTCa > 3:133300/3‑137 (MQ=255) aagCATCTGCTTTTATCGGCACCTCAAATTTTTGTGATAAAACACCCTGGAAGATATCGCCTGCTTTTATATAGCTTTTGATTTTTTCTACATCAGCCATAAAAGCCGATTTTTCATAATTAGAAGATACTGTCTCa > 6:436299/3‑137 (MQ=255) aagCATCTGCTTTTATCGGCACCTCAAATTTTTGTGATAAAAAACCCTGGAAGATATCGCCTGCTTTTATATAGCTTTTGATTTTTTCTACATCAGCCATAAAAGCCGATTTTTCATAATTAGAAGATACTGACTCa > 7:421299/3‑137 (MQ=255) aTCTGCTTTTATCGGCACCTCAAATTTTTGTGATAAAACACCCTGGAAGATATCGCCTGCTTTTATATAGCTTTTGATTTTTTCTACATCAGCCATAAAAGCCGATTTTTCATAATTAGAAGATACTGTCTCAAAGCTg < 6:226192/139‑1 (MQ=255) tCTGCTTTTATCGGCACCTCAAATTTTTGTGATAAAACACCCTGGAAGATATCGCCTGCTTTTATATAGCTTTTGATTTTTTCTACATCAGCCATAAAAGCCGATTTTTCATAATTAGAAGATACTGTCTCAAAGc > 4:405829/1‑136 (MQ=255) tCTGCTTTTATCGGCACCTCAAATTTTTGTGATAAAACACCCTGGAAGATATCGCCTGCTTTTATATAGCTTTTGATTTTTTCTACATCAGCCATAAAAGCCGATTTTTCATAATTAGAAGATACTGTCTCAAAGc < 3:405829/136‑1 (MQ=255) tCTGCTTTTATCGGCACCTCAAATTTTTGTGATAAAACACCCTGGAAGATATCGCCTGCTTTTATATAGCTTTTGATTTTTTCTACATCAGCCATAAAAGCCGATTTTTCATAATTAGAAGATACTGTCTCAAAGCTgg > 6:404018/1‑139 (MQ=255) tCTGCTTTTATCGGCACCTCAAATTTTTGTGATAAAACACCCTGGAAGATATCGCCTGCTTTTATATAGCTTTTGATTTTTTCTACATCAGCCATAAAAGCCGATTTTTCATAATTAGAAGATACTGTCTCAAAGCTgg > 2:244220/1‑139 (MQ=255) cTGCTTTTATCGGCACCTCAAATTTTTGTGATAAAACACCCTGGAAGATATCGCCTGCTTTTATATAGCTTTTGATTTTTTCTACATCAGCCATAAAAGCCGATTTTTCATAATTAGAAGATACTGTCTCAAAGCTggg > 3:225804/1‑139 (MQ=255) cttttATCGGCACCTCAAATTTTTGTGATAAAACACCCTGGAAGATATCGCCTGCTTTTATATAGCTTTTGATTTTTTCTACATCAGCCATAAAAGCCGATTTTTCATAATTAGAAGATACTGTCTCAAAGCTgg < 6:429517/134‑1 (MQ=255) cttttATCGGCACCTCAAATTTTTGTGATAAAACACCCTGGAAGATATCGCCTGCTTTTATATAGCTTTTGATTTTTTCTACATCAGCCATAAAAGCCGATTTTTCATAATTAGAAGATACTGTCTCAAAGCTgg < 4:225804/134‑1 (MQ=255) cttttATCGGCACCTCAAATTTTTGTGATAAAACACCCTGGAAGATATCGCCTGCTTTTATATAGCTTTTGATTTTTTCTACATCAGCCATAAAAGCCGATTTTTCATAATTAGAAGATACTGTCTCAAAGCTGGgtg < 1:244220/137‑1 (MQ=255) ttATCGGCACCTCAAATTTTTGTGATAAAACACCCTGGAAGATATCGCCTGCTTTTATATAGCTTTTGATTTTTTCTACATCAGCCATAAAAGCCGATTTTTCATAATTAGAAGATACTGTCTCAAAGCTGGGTGTc < 8:241328/137‑1 (MQ=255) aTCGGCACCTCAAATTTTTGTGATAAAACACCCTGGAAGATATCGCCTGCTTTTATATAGCTTTTGATTTTTTCTACATCAGCCATAAAAGCCGATTTTTCATAATTAGAAGATAc < 3:146482/116‑1 (MQ=255) aTCGGCACCTCAAATTTTTGTGATAAAACACCCTGGAAGATATCGCCTGCTTTTATATAGCTTTTGATTTTTTCTACATCAGCCATAAAAGCCGATTTTTCATAATTAGAAGATAc > 4:146482/1‑116 (MQ=255) aTCGGCACCTCAAATTTTTGTGATAAAACACCCTGGAAGATATCGCCTGCTTTTATATAGCTTTTGATTTTTTCTACATCAGCCATAAAAGCCGATTTTTCATAATTAGAAGATACTGTCTCAAAGCTGGGTGTCttg > 1:111982/1‑137 (MQ=255) aTCGGCACCTCAAATTTTTGTGATAAAACACCCTGGAAGATATCGCCTGCTTTTATATAGCTTTTGATTTTTTCTACATCAGCCATAAAAGCCGATTTTTCATAATTAGAAGATACTGTCTCAAAGCTGGGTGTCttg > 3:164531/1‑137 (MQ=255) aTTTTTGTGATAAAACACCCTGGAAGATATCGCCTGCTTTTATATAGCTTTTGATTTTTTCTACATCAGCCATAAAAGCCGATTTTTCATAATTAGAAGATACTGTCTCAAAGCTGGGTGTCTTGTATGAATCAGCaga < 5:184858/139‑1 (MQ=255) aTTTTTGTGATAAAACACCCTGGAAGATATCGCCTGCTTTTATATAGCTTTTGATTTTTTCTACATCAGCCATAAAAGCCGATTTTTCATAATTAGAAGATACTGTCTCAAAGCTGGGTGTCTTGTATGAATCAGCaga < 2:430501/139‑1 (MQ=255) aTTTTTGTGATAAAACACCCTGGAAGATATCGCCTGCTTTTATATAGCTTTTGATTTTTTCTACATCAGCCATAAAAGCCGATTTTTCATAATTAGAAGATACTGTCTCAAAGCTGGGTGTCTTGTATGAATCAGCaga < 3:184063/139‑1 (MQ=255) tttttGTGATAAAACACCCTGGAAGATATCGCCTGCTTTTATATAGCTTTTGATTTTTTCTACATCAGCCATAAAAGCCGATTTTTCATAATTAGAAGATACTGTCTCAAAGCTGGGTGTCTTGTATGAATCAGCagaa < 6:334050/139‑1 (MQ=255) cctGGAAGATATCGCCTGCTTTTATATAGCTTTTGATTTTTTCTACATCAGCCATAAAAGCCGATTTTTCATAATTAGAAGATACTGTCTCAAAGCTGGGTGTCTTGTATGAATCAGCAGAAAGAAACAGCTCTTTTAt > 4:74546/3‑139 (MQ=255) cctGGAAGATATCGCCTGCTTTTATATAGCTTTTGATTTTTTCTACATCAGCCATAAAAGCCGATTTTTCATAATTAGAAGATACTGTCTCAAAGCTGGGTGTCTTGTATGAATCAGCAGAAAGAAACAGCTCTTTTAt > 4:46234/3‑139 (MQ=255) tGGAAGATATCGCCTGCTTTTATATAGCTTTTGATTTTTTCTACATCAGCCATAAAAGCCGATTTTTCATAATTAGAAGATACTGTCTCAAAGCTGGGTGTCTTGTATGAATCTGCAGAAAGAAAGAGCTCTTTTATGt > 2:107268/1‑139 (MQ=255) tGGAAGATATCGCCTGCTTTTATATAGCTTTTGATTTTTTCTACATCAGCCATAAAAGCCGATTTTTCATAATTAGAAGATACTGTCTCAAAGCTGGGTGTCTTGTATGAATCAGCAGAAAGAAACAGCTCTTTTATGt > 7:179542/1‑139 (MQ=255) gAAGATATCGCCTGCTTTTATATAGCTTTTGATTTTTTCTACATCAGCCATAAAAGCCGATTTTTCATAATTAGAAGATACTGTCTCAAAGCTGGGTGTTTTGTATGAATCAGCAGAAAGAAACAGCTCTTTTATGt < 3:6844/137‑1 (MQ=255) atCGCCTGGTTTTATATAGCTTTTGATGTTTTCTACATCAGCCATAAAAGCCGATTTTTCATAATTAGAAGATACTGTCTCAAAGCTGGGTGTCTTGTATGAATCAGCAGAAAGGAACAGCTCTTTTTTGGTttgttgg > 6:13803/1‑138 (MQ=255) atCGCCTGCTTTTATATAGCTTTTGATTTTTTCTACATCAGCCATAAAAGCCGATTTTTCATAATTAGAAGATACTGTCTCa < 1:154020/82‑1 (MQ=255) atCGCCTGCTTTTATATAGCTTTTGATTTTTTCTACATCAGCCATAAAAGCCGATTTTTCATAATTAGAAGATACTGTATCa > 2:154020/1‑82 (MQ=255) cGCCTGCTTTTATATAGCTTTTGATTTTTTCTACATCAGCCATAAAAGCCGAttttt < 7:192769/57‑1 (MQ=16) cGCCTGCTTTTATATAGCTTTTGATTTTTTCTACATCAGCCATAAAAGCCGAttttt > 8:192769/1‑57 (MQ=16) cctgCTTTTATATAGCTTTTGATTTTTTCTACATCAGCCATAAAAGCCGATTTTTCATAATTAGAAGATACTGTCTCAAAGCTGGGTGTCTTGTATGAATCAGCAGAAAGAAACAGCTCTTTTATGTTTTTTTGGTCca > 7:295377/4‑139 (MQ=255) cctgCTTTTATATAGCTTTTGATTTTTTCTACATCAGCCATAAAAGCCGATTTTTCATAATTAGAAGATACTGTCTCAAAGCTGGGTGTCTTGTATGAATCAGCAGAAAGAAACAGCTCTTTTATGTTTTTTTGGTCca > 1:47849/4‑139 (MQ=255) cctgCTTTTATATAGCTTTTGATTTTTTCTACATCAGCCATAAAAGCCGATTTTTCATAATTAGAAGATACTGTCTCAAAGCTGGGTGTCTTGTATGAATCAGCAGAAAGAAACAGCTCTTTTATGTTTTTTTGGTCca > 5:300157/4‑139 (MQ=255) cTTTTATATAGCTTTTGATTTTTTCTACATCAGCCATAAAAGCCGATTTTTCATAATTAGAAGATACTGTCTCAAAGCTgg > 8:94719/1‑81 (MQ=255) cTTTTATATAGCTTTTGATTTTTTCTACATCAGCCATAAAAGCCGATTTTTCATAATTAGAAGATACTGTCTCAAAGCTgg < 7:94719/81‑1 (MQ=255) gcttttgATTTTTTCTACATCAGCGATAAAAGCCGATTTTTCATAATTAGAAGATACTGTCTCAAAGCTGGGTGTCTTGTATGAATCAGCAGAAAGAAACAGCTCTTTTATGTTTTTTTGGTCCATCATTTTTTCAAt > 1:179382/4‑138 (MQ=255) gcttttgATTTTTTCTACATCAGCCATAAAAGCCGATTTTTCATAATTAGAAGATACTGTCTCAAAGCTGGGTGTCTTGTATGAATCAGCAGAAAGAAACAGCTCTTTTATGTTTTTTTGGTCCATCATTTTTTCAAt > 2:318354/4‑138 (MQ=255) gcttttgATTTTTTCTACATCAGCCATAAAAGCCGATTTTTCATAATTAGAAGATACTGTCTCAAAGCTGGGTGTCTTGTATGAATCAGCAGAAAGAAACAGCTCTTTTATGTTTTTTTGGTCCATCATTTTTTCAATg < 2:238672/136‑1 (MQ=255) gcttttgATTTTTTCTACATCAGCCATAAAAGCCGATTTTTCATAATTAGAAGATACTGTCTCAAAGCTGGGTGTCTTGTATGAATCAGCAGAAAGAAACAGCTCTTTTATGTTTTTTTGGTCCATCATTTTTTCAATg < 7:201918/136‑1 (MQ=255) gcttttgATTTTTTCTACATCAGCCATAAAAGACTATTTTTCATAATTAGAAGATACTGTCTCAAAGCTGGGTGTCTTGTATGAATCAGCAGAAAGAAACAGCTCTTTTATGTTTTTTTGGTCCATCATTTTTTCAATg < 7:369205/136‑1 (MQ=255) cttttgATTTTTTCTACATCAGCCATAAAAGCCGATTTTTCATAATTAGAAGATACTGTCTCAAAGCTGGGTGTc > 4:446779/3‑75 (MQ=255) cttttgATTTTTTCTACATCAGCCATAAAAGCCGATTTTTCATAATTAGAAGATACTGTCTCAAAGCTGGGTGTc < 3:446779/73‑1 (MQ=255) cttttgATTTTTTCTACATCAGCCATAAAAGCCGATTTTTCATAATTAGAAGATACTGTCTCAAAGCTGGGTGTCTTGTATGAATCAGCAGAAAGAAACAGCTCTTTTATGTTTTTTTGGTCCATCATTTTTTCAAt > 4:248635/3‑137 (MQ=255) cttttgATTTTTTCTACATCAGCCATAAAAGCCGATTTTTCATAATTAGAAGATACTGTCTCAAAGCTGGGTGTCTTGTATGAATCAGCAGAAAGAAACAGCTCTTTTATGTTTTTTTGGTCCATCATTTTTTCAAt > 3:427611/3‑137 (MQ=255) cttttgATTTTTTCTACATCAGCCATAAAAGCCGATTTTTCATAATTAGAAGATACTGTCTCAAAGCTGGGTGTCTTGTATGAATCAGCAGAAAGAAACAGCTCTTTTATGTTTTTTTGGTCCATCATTTTTTCAATga < 5:404018/137‑1 (MQ=255) cttttgATTTTTTCTACATCAGCCATAAAAGCCGATTTTTCATAATTAGAAGATACTGTCTCAAAGCTGGGTGTCTTGTATGAATCAGCAGAAAGAAACAGCTCTTTTATGTTTTTTTGGTCCATCATTTTTTCAATga > 1:248665/3‑139 (MQ=255) tttgATTTTTTCTACATCAGCCATAAAAGCCGATTTTTCATAATTAGAAGATACTGTCTCAAAGCTGGGTGTCTTGTATGAATCAGCAGAAAGAAACAGCTCTTTTATGTTTTTTTGGTCCATCATTTTTTCAAt > 3:392735/1‑135 (MQ=255) | ATACATATACGGAGAAGGATTGACGATCCTAAGCACCCGGTATAACTCAAAGGCATCTGATTTTATCGGAATCTCAAATTTTTGTGACAGAACGCCTTGGAAGATATCGCCCGCTTTTATATATTCTTTTATTTTTTCTACATCAGCCATAAAGGCTGGTTTTTCATAATTAGAAGATACTGTCTCAAAGCTGGGTGTCTTATATGAATCAGCAGAAAGAAACAGTTCTTTTATGTTTTTTTGATCCATCATTTTTTCTATGA > CP006881/2194430‑2194692 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |