| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP006881 | 2,194,946 | T→A | L112L (CTA→CTT) | U712_10995 ← | Anthranilate synthase component 1 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 2,194,946 | 0 | T | A | 97.6% | 256.4 / NA | 83 | L112L (CTA→CTT) | U712_10995 | Anthranilate synthase component 1 |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base A (42/39); minor base C (2/0); total (44/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.96e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CAATTAATGTCCGGCAAACAAACAGCATACACTTTTCCATTCCTGTTTCTTTTGAATGCGGAGGAACAGAAGGCTCAATCAGCGGGATCATATCGTAGCTTAAGTACCCGACAGCTCCGCCGACAAAAGGAATGCCTAGCTCTGGCGTTTTGATTTTGTACGTGGTATTCATCCAATTCAGAACTTCTTTAAGTTCATTTCCTGTGTAATGAGATCTGCCGTCATGATCTGTAGCTGTAAAACGGCTCTGCTTTTCTTTAATCGTGAGGAA > CP006881/2194810‑2195080 | cAATTAATGTCGGGAAAAAAAACAGCATACACTTTTCCATGTCTGTTTCTTTGGTATGCGAAGGAACAGAAGGCTCAATCAGCGGGATCATATCATAGCTTAAGTACCCGACAGCTCCGCCGACAAAAGGAATGCCAAg < 4:255158/139‑1 (MQ=255) ttAATGTCCGGCAAACAAACAGCATACACTTTTCCATGTCTGTTTCTTTGGTATGCGAAGGAACAGAAGGCTCAATCAGCGGGATCATATCATAGCTTAAGTACCCGACAGCTCCGCCGACAAAAGGAATGCCAAGct > 6:279406/1‑138 (MQ=255) aaTGTCCGGCAAACAAACAGCATACACTTTTCCATGTCTGTTTCTTTGGTATGCGAAGGAACAGAAGGCTCAATCAGCGGGATCATATCATAGCTTAAGTACCCGACAGCTCCGCCGACAAAAGGAATGCCAAGctca < 6:301578/138‑2 (MQ=255) aTGTCCGGCAAACAAACAGCATACACTTTTCCATGTCTGTTTCTTTGGTATGCGAAGGAACAGAAGGCTCAATCAGCGGGATCATATCATAGCTTAAGTACCCGACAGCTCCGCCGACAAAAGGAATGCCAAGctcag < 4:85370/138‑3 (MQ=255) cGGCAAACAAACAGCATACACTTTTCCATGTCTGTTTCTTTGGTATGCTAAGGAACAGAAGGCTCAATCAGCGGGAGCATATCATAGCTTAAGTACACGACAGCTCCGCCGACAAAAGGAATGCCAAGCTCAGGTGttt > 2:323907/1‑139 (MQ=255) cGGCAAACAAACAGCATACACTTTTCCATGTCTGTTTCTTTGGTATGCGAAGGAACAGAAGGCTCAATCAGCGGGATCATATCATAGCTTAAGTACCCGACAGCTCCGCCGACAAAAGGAATGCCCAGCTCAGGTGttt > 6:244051/1‑139 (MQ=255) cGGCAAACAAACAGCATACACTTTTCCATGTCTGTTTCTTTGGTATGCGAAGGAACAGAAGGCTCAATCAGCGGGATCATATCATAGCTTAAGTACCCGACAGCTCCGCCGACAAAAGGAATGCCAAGCTCAGGTGttt > 5:16647/1‑139 (MQ=255) cGGCAAACAAACAGCATACACTTTTCCATGTCTGTTTCTTTGGTATGCGAAGGAACAGAAGGCTCAATCAGCGGGATCATATCATAGCTTAAGTACCCGACAGCTCCGCCGACAAAAGGAATGCCAAGCTCAGGTGttt > 3:255158/1‑139 (MQ=255) cGGCAAACAAACAGCATACACTTTTCCATGTCTGTTTCTTTGGTATGCGAAGGAACAGAAGGCTCAATCAGCGGGATCATATCATAGCTTAAGTACCCGACAGCTCCGCCGACAAAAGGAATGCCAAGCTCAGGTGttt > 3:57567/1‑139 (MQ=255) cGGCAAACAAACAGCATACACTTTTCCATGTCTGTTTCTTTGGTATGCGAAGGAACAGAAGGCTCAATCAGCGGGATCATATCATAGCTTAAGTACCCGACAGCTCCGCCGACAAAAGGAATGCCAAGCTCAGGTGttt > 7:315365/1‑139 (MQ=255) aacaGCATACACTTTTCCATGTCTGTTTCTTTGGTATGCGAAGGAACAGAAGGCTCAATCAGCGGGATCATATCATAGCTTAAGTACCCGACAGCTCCGCCGACAAAAGGAATGCCAAGCTCAGGTGTTTTGATTTTGt < 8:206081/139‑1 (MQ=255) gCATACACTTATCCTTGTCTGTTGCTTTGGTATGCGAATGAACAGAAGGCTCAATCAGCGGTATCATATCATAGCTTAAGTACCCGACAGCTCCGCCGACAAAAGGAATGCCAAGCTCAGGTGTTTTGATTTTGTATGt < 2:309692/139‑1 (MQ=255) tttCCATGTCTGTTTCTTTGGTATGCGAAGGAACAGAAGGCTCAATCAGCGGGATCATATCATAGCTTAAGTACCCGACAGCTCCGCCGCCAAAAGGAATGCCAAGCTCAGGTGTTTTGATTTTGTATGTGGTATTCAt > 1:262393/1‑139 (MQ=255) tttCCATGTCTGTTTCTTTGGTATGCGAAGGAACAGAAGGCTCAATCAGCGGGATCATATCATAGCTTAAGTACCCGACAGCTCCGCCGACAAAAGGAATGCCAAGCTCAGGTGTTTTGATTTTGTATGTGGTATTCAt > 7:102235/1‑139 (MQ=255) tCCATGTCTGTTTCTTTGGTATGCGAATGAACAGATGGCTAAATCAGCGGGTTCATATCATAGCTTATGTACCCGACAGCTCCGCCGACAAAAGGAATGCCAAGCTCAGGTGTTTTGATTTTGTATGTGGTATTCATc < 4:336903/138‑1 (MQ=255) tCCATGTCTGTTTCTTTGGTATGCGAAGGAACAGAAGGCTCAATCAGCGGGATCATATCATAGCTTAAGTACCCGACAGCTCCGCCGACAAAAGGAATGCCAAGCTCAGGTGTTTTGATTTTGTATGTGGTATTCATc > 5:28803/1‑138 (MQ=255) tCCATGTCTGTTTCTTTGGTATGCGAAGGAACAGAAGGCTCAATCAGCGGGATCATATCATAGCTTAAGTACCCGACAGCTCCGCCGACAAAAGGAATGCCAAGCTCAGGTGTTTTGATTTTGTATGTGGTATTCATc > 1:340110/1‑138 (MQ=255) tCCATGTCTGTTTCTTTGGTATGCGAAGGAACAGAAGGCTCAATCAGCGGGATCATATCATAGCTTAAGTACCCGACAGCTCCGCCGACAAAAGGAATGCCAAGCTCAGGTGTTTTGATTTTGTATGTGGTATTCATc > 4:283269/1‑138 (MQ=255) tCCATGTCTGTTTCTTTGGTATGCGAAGGAACAGAAGGCTCAATCAGCGGGATCATATCATAGCTTAAGTACCCGACAGCTCCGCCGACAAAAGGAATGCCAAGCTCAGGGGTTTTGATTTTGTATGTGGTATTCATc < 4:386367/138‑1 (MQ=255) catgtcTGTTTCTTTGGTATGCGAAGGAACAGAAGGCTCAATCAGCGGGATCATATCATAGCTTAAGTACCCGACAGCTCCGCCGACAAAAGGAATGCCAAGCTCAGGTGTTTTGATTTTGTATGTGGTATTCATCCag > 1:193346/6‑138 (MQ=255) tgtcTGTTTCTTTGGTATGCGAAGGAACAGAAGGCTCAATCAGCGGGATCATATCATAGCTTAAGTACCCGACAGCTCCGCCGACAAAAGGAATGCCAAGCTCAGGTGTTTTGATTTTGTATGTGGTATTCATCCAGtt > 5:363158/4‑139 (MQ=255) gtcTGTTTCTTTGGTATGCGAACGAACAGAAGGCTCAATCAGCGGGATCATATCATATCTTAACTACCCCACAGCTCCGCCGACAAAAGGATTGCCAAGCTCAGGTGTTTTGATTTAGTATGTGGTATTATTCCAGtt > 3:336903/3‑138 (MQ=255) tttCTTTGGTATGCGAAGGAACAGAAGGCTCAATCAGCGGGATCATATCATAGCTTAAGTACCCGACAGCTCCGCCGACAAAAGGAATGCCAAGCTCAGGTGTTTTGATTTTGTATGTGGTATTCATCCAGTTCAgca < 5:87675/138‑3 (MQ=255) tttCTTTGGTATGCGAAGGAACAGAAGGCTCAATCAGCGGGATCATATCATAGCTTAAGTACCCGACAGCTCCGCCGACAAAAGGAATGCCAAGCTCAGGTGTTTTGATTTTGTATGTGGTATTCATCCAGTTCAGCAc < 4:99233/139‑1 (MQ=255) tttCTTTGGTATGCGAAGGAACAGAAGGCTCAATCAGCGGGATCATATCATAGCTTAAGTACCCGACAGCTCCGCCGACAAAAGGAATGCCAAGCTCAGGTGTTTTGATTTTGTATGTGGTATTCATCCAGTTCAGCAc < 4:448841/139‑1 (MQ=255) gtaTGCGAAGGAACAGAAGGCTCAATCAGCGGGATCATATCATAGCTTAAGTACCCGACAGCTCCGCCGACAAAAGGAATGCCAAGCTCAGGTGTTTTGATTTTGTATGTGGTATTCATCCAGTTCAGCACTTCtttta > 3:318661/3‑137 (MQ=255) gtaTGCGAAGGAACAGAAGGCTCAATCAGCGGGATCATATCATAGCTTAAGTACCCGACAGCTCCGCCGACAAAAGGAATGCCAAGCTCAGGTGTTTTGATTTTGTATGTGGTATTCATCCAGTTCAGCACTTCtttt < 3:283269/136‑2 (MQ=255) tGCGAAGGAACAGAAGGCTCAATCAGCGGGATCATATCATAGCTTAAGTACCCGACAGCTCCGCCGACAAAAGGAATGCACAGCTCAGGTGTTTTGATTTTGTATGTGGAATTAATCCAGTTCAGCACTTCTATTAGt > 6:310360/1‑138 (MQ=255) gaaggaACAGAAGGCTCAATCAGCGGGATCATATCATAGCTTAAGTACCCGACAGCTCCGCCGACAAAAGGAATGCCAAGCTCAGGTGTTTTGATTTTGTATGTGGTATTCATCCAGTTCAGCACTTCTTTTAGTTCAt < 5:279406/137‑1 (MQ=255) gaACAGAAGGCTCAATCTGCGGGATCATATCATAGCTTAAGTACCCGACAGCTCCGCCGACAAAAGGAATGCCAAGCTCAGGTGTTTTGATTTTGTATGTGGTATTCATCCAGTTCAGCACTTCTTTTAGTTCATTTcc < 2:402536/139‑1 (MQ=255) gaACAGAAGGCTCAATCAGCGGTATCTTTTCATAGCTTAAGTACCCGACAGCTCCGCCGACAAAAGGAATGCCAAGCTCAGGTGTTTTGATTTTGTATGTGGTATTCATCCAGTTCAGCACTTCTTTTAGTTCATTTc < 2:340110/138‑1 (MQ=255) aaCAGAAGGCTCAATCAGCGGGATCATATCATAGCTTAAGTACCTGACAGCTCCGCCGACAAAAGGAATGCCAAGCTCAGGTGTTTTGATTTTGTATGTGGTATTCATCCAGTTCAGCACTTCTTTTAGTTCATTTCCt < 3:431393/139‑1 (MQ=255) aaCAGAAGGCTCAATCAGCGGGATCATATCATAGCTTAAGTACCCGACAGCTCCGCCGACAAAAGGAATGCCAAGCTCAGGTGTTTTGAtttt < 3:415933/93‑1 (MQ=255) aaCAGAAGGCTCAATCAGCGGGATCATATCATAGCTTAAGTACCCGACAGCTCCGCCGACAAAAGGAATGCCAAGCTCAGGTGTTTTGAtttt > 4:415933/1‑93 (MQ=255) aaCAGAAGGCTCAATCAGCGGGATCATATCATAGCTTAAGTACCCGACAGCTCCGCCGACAAAAGGAATGCCAAGCTCAGGTGTTTTGATTTTGTATGTGGTATTCATCCAGTTCAGCACTTCTTTTAGTTCATTTcc < 2:193346/138‑1 (MQ=255) aaCAGAAGGCTCAATCAGCGGGATCATATCATAGCTAAAGTACCCGACAGCTCCGCCGACAAAAGGAATGCCAAGCTCAGGTGTTTTGATTTTGTATGTGGTATTCATCCAGTTCAGCACTTCTTTTAGTTCATTTCCt < 2:206305/139‑1 (MQ=255) agggCTCAATCTGCGGGATCATATCATAGCTTAAGTACCCGACAGCTACGCAGACAAAAGGAATGCCAAGCTCAGGTGTTTTGATTTTGTATGTGGTATTCATCCAGTTCAGCACTTCTTTTAGTTCATTTCCTgtgtt < 8:42450/137‑2 (MQ=255) ggCTCAATCAGCGGGATCATATCATAGCTTAAGTACCCGACAGCTCCGCCGACAAAAGGAATGCCAAGCTCAGGTGTTTTGATTTTGTATGTGGTATTCATCCAGTTCAGCACTTCTTTTAGTTCATTTCCTGTGTaaa < 6:16647/139‑2 (MQ=255) cTCAATCAGCGGGATCATATCATAGCTTAAGTACCCGACAGCTCCGCCGACAAAAGGAATGCCAAGCTCAGGTGTTTTGATTTTGTATGTGGTATTCATCCAGTTCAGCACTTCTTTTAGTTCATTTCCTGTGTaaa > 3:142123/1‑136 (MQ=255) tCAATCAGCGGGATCATATCATAGCTTAAGTACCCGACAGCTCCGCCGACAAAAGGAATGCCAAGCTCAGGTGTTTTGATTTTGTATGTGGTATTCATCCAGTTCAGCACTTCTTTTAGTTCATTTc < 2:343684/127‑1 (MQ=255) tCAATCAGCGGGATCATATCATAGCTTAAGTACCCGACAGCTCCGCCGACAAAAGGAATGCCAAGCTCAGGTGTTTTGATTTTGTATGTGGTATTCATCCAGTTCAGCACTTCTTTTAGTTCATTTc > 1:343684/1‑127 (MQ=255) tCAATCAGCGGGATCATATCATAGCTTAAGTACCCGACAGCTCCGCCGACAAAAGGAATGCCAAGCTCAGGTGTTTTGATTTTGTATGTGGTATTCATCCAGTTCAGCACTTCTTTTAGTTCATTTCCTGTGTaaa > 3:57529/1‑135 (MQ=255) aaTCAGCGGGATCATATCATAGCTTAAGTACCCGACAGCTCCGCCGACAAAAGGAATGCCAAGCTCAGGTGTTTTGATTTTGTATGTGGTATTCATCCAGTTCAGCACTTCTTTTAGTTCATTTCCTGTGTaaa > 4:77924/1‑133 (MQ=255) aaTCAGCGGGATCATATCATAGCTTAAGTACCCGACAGCTCCGCCGACAAAAGGAATGCCAAGCTCAGGTGTTTTGATTTTGTATGTGGTATTCATCCAGTTCAGCACTTCTTTTAGTTCATTTCCTGTGTaaa < 3:77924/134‑2 (MQ=255) aaTCAGCGGGATCATATCATAGCTTAAGTACCCGACAGCTCCGCCGACAAAAGGAATGCCAAGCTCAGGTGTTTTGATTTTGTATGTGGTATTCATCCAGTTCAGCACTTCTTTTAGTTCATTTCCTGTGTAAAGAGAt > 7:426082/1‑139 (MQ=255) cAGCGGGATCATATCATAGCTTAAGTACCCGACAGCTCCGCCGACAAAAGGAATGCCAAGCTCAGGTGTTTTGATTTTGTATGTGGTATTCATCCAGTTCAGCACTTCTTTTAGTTCATTTCCTGTGTaa < 1:348598/130‑1 (MQ=255) cAGCGGGATCATATCATAGCTTAAGTACCCGACAGCTCCGCCGACAAAAGGAATGCCAAGCTCAGGTGTTTTGATTTTGTATGTGGTATTCATCCAGTTCAGCACTTCTTTTAGTTCATTTCCTGTGTaa > 2:348598/1‑130 (MQ=255) aGCGGGATCATATCATAGCTTAAGTACCCGACAGCTCCGCCGACAAAAGGAATGCCAAGCTCAGGTGTTTTGATTTTGTATGTGGTATTCATCCAGTTCAGCACTTCTTTTAGTTCATTTCCTGTGTAAAGAGATTTg < 8:315365/138‑1 (MQ=255) aGCGGGATCATATCATAGCTTAAGTACCCGACAGCTCCGCCGACAAAAGGAATGCCAAGCTCAGGTGTTTTGATTTTGTATGTGGTATTCATCCAGTTCAGCACTTCTTTTAGTTCATTTCCTGTGTAAAGAGATTTg < 8:102235/138‑1 (MQ=255) cGGGATCATATCATAGCTTAAGTACCCGACAGCTCCGCCGACAAAAGGAATGCCAAGCTCAGGTGTTTTGATTTTGTATGTGGTATTCATCCAGTTCAGCACTTCttt > 2:172619/1‑108 (MQ=255) cGGGATCATATCATAGCTTAAGTACCCGACAGCTCCGCCGACAAAAGGAATGCCAAGCTCAGGTGTTTTGATTTTGTATGTGGTATTCATCCAGTTCAGCACTTCttt < 1:172619/108‑1 (MQ=255) cGGGATCATATCATAGCTTAAGTACCCGACAGCTCCGCCGACAAAAGGAATGCCAAGCTCAGGTGTTTTGATTTTGTATGTGGTATTCATCCAGTTCAGCACTTCTTTTAGTTCATTTCCTGTGTAAAGAGATTTGctg > 7:184134/1‑137 (MQ=255) cGGGATCATATCATAGCTTAAGTACCCGACAGCTCCGCCGACAAAAGGAATGCCAAGCTCAGGTGTTTTGATTTTGTATGTGGTATTCATCCAGTTCAGCACTTCTTTTAGTTCATTTCCTGTGTAAAGAGATTTGctg > 4:435626/1‑137 (MQ=255) cGGGATCATATCATAGCTTAAGTACCCGACACCTCCGCCGACAAAAGGAATGACAAGCTAACGTGTATTGATTTTGTATGTGGTATTCATCCAGTACAGCACTTCTTTTAGTTAAATTACTGTGTAAAGAGAttagcct > 7:42450/1‑133 (MQ=255) atcatatcatAGCTTAAGTACCCGACAGCTCCGCCGACAAAAGGAATGCCAAGCTCAGGTGTTTTGATTTTGTATGTGGTATTCATCCAGTTCAGCACTTCTTTTAGTTCATTTCCTGTGTAAAGAGATTTGCTGTcct > 1:437005/1‑137 (MQ=255) atcatatcatAGCTTAAGTACCCGACAGCTCCGCCGACAAAAGGAATGCCAAGCTCAGGTGTTTTGAGTTTGTATGTGGTATTCATCCAGTTCAGCACTTCTGTTAGTTCAGTTCCGGTGTAAAGAGATTTGCTGTcct > 8:318439/1‑137 (MQ=255) tcatAGCTTAAGTACCCGACAGCTCCGCCGACAAAAGGAATGCCAAGCTCAGGTGTTTTGATTTTGTATGTGGTATTCATCCAGTTCAGCACTTCTTTTAGTTCATTTCCTGTGTa > 5:213899/4‑116 (MQ=255) tcatAGCTTAAGTACCCGACAGCTCCGCCGACAAAAGGAATGCCAAGCTCAGGTGTTTTGATTTTGTATGTGGTATTCATCCAGTTCAGCACTTCTTTTAGTTCATTTCCTGTGTa < 6:213899/113‑1 (MQ=255) tcatAGCTTAAGTACCCGACAGCTCCGCCGACAAAAGGAATGCCAAGCTCAGGTGTTTTGATTTTGTATGTGGTATTCATCCAGTTCAGCACTTCTTTTAGTTCATTTCCTGTGTAAAGAGATTTGCTGTCCTGATcag < 4:57529/136‑3 (MQ=255) tAGCTTAAGTACCCGACAGCTCCGCCGACAAAAGGAATGCCAAGCTCAGGTGTTTTGATTTTGTATGTGGTATTCATc < 3:267448/78‑1 (MQ=255) tAGCTTAAGTACCCGACAGCTCCGCCGACAAAAGGAATGCCAAGCTCAGGTGTTTTGATTTTGTATGTGGTATTCATc > 4:267448/1‑78 (MQ=255) tAGCTTAAGTACCCGACAGCTCCGCCGACAAAAGGAATGCCAAGCTCAGGTGTTTTGATTTTGTATGTGGTATTCATCCAGTTCAGCACTTCTTTTAGTTCATTTCCTGTGTAAAGAGATTTGCTGTCCTGATcagcgg > 4:124436/1‑134 (MQ=255) aGCTTAAGTACCCGACAGCTCCGCCGACAAAAGGAATGCCAAGCTCAGGTGTTTTGATTTTGTATGTGGTATTCATCCAGTTCAGCACTTCTTTTAGTTCATTTCCTGTGTAAAGAGATTTGCTGTCCTGATcagcggc > 7:116755/1‑133 (MQ=255) cTTAAGTACCCGACAGCTCCGCCGACAAAAGGAATGCCAAGCTCAGGTGTTTTGATTTTGTATGTGGTATTCATCCAGTTCAGCACTTCTTTTAGTTCATTTCCt > 2:337949/1‑105 (MQ=255) cTTAAGTACCCGACAGCTCCGCCGACAAAAGGAATGCCAAGCTCAGGTGTTTTGATTTTGTATGTGGTATTCATCCAGTTCAGCACTTCTTTTAGTTCATTTCCt < 1:337949/105‑1 (MQ=255) ccGACAGCTCCGCCGACAAAAGGAATGCCAAGCTCAGGTGTTTTGATTTTGTatg > 2:220689/1‑53 (MQ=255) ccGACAGCTCCGCCGACAAAAGGAATGCCAAGCTCAGGTGTTTTGATTTTGTatg < 1:220689/55‑3 (MQ=255) gACAGCTCCGCCGACAAAAGGAATGCCAAGCTCAGGTGTTTTGATTTTGTATGTGGTATTCATCCAGTTCAGCACTTCTTTTAGTTCATTTCCTGTGTAAagag < 5:223784/104‑1 (MQ=255) gACAGCTCCGCCGACAAAAGGAATGCCAAGCTCAGGTGTTTTGATTTTGTATGTGGTATTCATCCAGTTCAGCACTTCTTTTAGTTCATTTCCTGTGTAAagag > 6:223784/1‑104 (MQ=255) aGCTCCGCCGACAAAAGGAATGCCAAGCTCAGGTGTTTTGATTTTGTATGTGGTATTCATCCAGTTCAGCACTTCTTTTAGTTCATTTCCTGTGTAAAGAGATTTGCTGTCCTGATCAGCGGCCGAAAAACGGCCCTGc < 6:400834/139‑1 (MQ=255) cTCCGCCGACAAACGGAATGCCAAGCTCAGGTGTTTTGATTTTGTATGTGGTATTCATCCAGTTCAGCACTTCTTTTAGTTCATTTCCTGTGTAAAGATATTTGCTGTCCTGATCAGCGGCCTAAAAACGGCCCTGCtc < 4:54322/139‑2 (MQ=255) cTCCGCCGACAAAAGGAATGCCAAGCTCAGGTGTTTTGATTTTGTATGTGGTATTCATc < 6:374512/59‑1 (MQ=255) cTCCGCCGACAAAAGGAATGCCAAGCTCAGGTGTTTTGATTTTGTATGTGGTATTCATc > 5:374512/1‑59 (MQ=255) cTCCGCCGACAAAAGGAATGCCAAGCTCAGGTGTTTTGATTTTGTATGTGGTATTCATCCAGTTCAGCACTTCTTTTAGTTCATTTCCTGTGTAAagag > 3:387168/1‑99 (MQ=255) cTCCGCCGACAAAAGGAATGCCAAGCTCAGGTGTTTTGATTTTGTATGTGGTATTCATCCAGTTCAGCACTTCTTTTAGTTCATTTCCTGTGTAAagag < 4:387168/99‑1 (MQ=255) cTCCGCCGACAAAAGGAATGCCAAGCTCAGGTGTTTTGATTTTGTATGTGGTATTCATCCAGTTCAGCACTTCTTTTAGTTCATTTCCTGTGTAAAGAGATTTGCTGTCCTGATCAGCGGCCTAAAAACGGCCCTGCtc < 6:133882/139‑2 (MQ=255) cTCCGCCGACAAAAGGAATGCCAAGCTCAGGTGTTTTGATTTTGTATGTGGTATTCATCCAGTTCAGCACTTCTTTTAGTTCATTTCCTGTGTAAAGAGATTTGCTGTCCTGATCAGCGGCCGAAAAACGGCCCTGCtc > 2:353355/1‑138 (MQ=255) cgccgACAAAAGGAATGCCAAGCTCAGGTGTTTTGATTTTGTATGTGGTATTCATCCAGTTCAGCACTTCTTTTAGTTCATTTCCTGTGTAAAGAGATTTGCTGTCCTGATCAGCGGCCGAAAAACGGCCCTGCTCTTc > 8:63679/1‑139 (MQ=255) ccgACAAAAGGAATGCCAAGCTCAGGTGTTTTGATTTTGTATGTGGTATTCATCCAGTTCAGCACTTCTTTTAGTTCATTTCCTGTGTAAAGAGATTTGct > 3:242113/1‑100 (MQ=255) ccgACAAAAGGAATGCCAAGCTCAGGTGTTTTGATTTTGTATGTGGTATTCATCCAGTTCAGCACTTCTTTTAGTTCATTTCCTGTGTAAAGAGATTTGct < 4:242113/101‑2 (MQ=255) ccgACAAAAGGAATGCCAAGCTCAGGTGTTTTGATTTTGTATGTGGTATTCATCCAGTTCAGCACTTCTTTTAGTTCATTTCCTGTGTAAAGAGATTTGCTGTCCTGATCAGCGGCCGAAAAACGGCCCTGCTcttctt > 1:44979/1‑139 (MQ=255) aaGGAATGCCAAGCTCAGGTGTTTTGATTTTGTATGTGGTATTCATCCAGTTCAGCACTTCTTTTAGTTCATTTCCTGTGTAAAGATATTTGCTGTCCTGATCAGCGGCCGAAAAACGGCCCTGCTCTTCTTTAATTGt < 3:124436/139‑1 (MQ=255) tGCCAAGCTCAGGTGTTTTGATTTTGTATGTGGTATTCATCCAGTTCAGCACTTCTTTTAGTTCATTTCCTGTGTAAAGAGATTTGCTGTCCTGATCAGCGGCCGAAAAACGGCCCTGCTCTTCTTTAATTGTGAGaaa > 5:378905/1‑139 (MQ=255) | CAATTAATGTCCGGCAAACAAACAGCATACACTTTTCCATTCCTGTTTCTTTTGAATGCGGAGGAACAGAAGGCTCAATCAGCGGGATCATATCGTAGCTTAAGTACCCGACAGCTCCGCCGACAAAAGGAATGCCTAGCTCTGGCGTTTTGATTTTGTACGTGGTATTCATCCAATTCAGAACTTCTTTAAGTTCATTTCCTGTGTAATGAGATCTGCCGTCATGATCTGTAGCTGTAAAACGGCTCTGCTTTTCTTTAATCGTGAGGAA > CP006881/2194810‑2195080 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |