BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP006881	2,195,365	G→A	intergenic (‑84/+132)	U712_10995 ← / ← U712_11000	Anthranilate synthase component 1/Chorismate mutase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP006881	2,195,365	0	G	A	100.0%	359.8 / NA	114	intergenic (‑84/+132)	U712_10995/U712_11000	Anthranilate synthase component 1/Chorismate mutase
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (47/67); total (47/67)

Only 100 of 115 total aligned reads displayed.

GGTAGGACAAGCTGTCCTGTAAAAATGAAGAAATGTTGGATTGGTAATACATTGCTCTCACTCCTTATGGCAAGGAGAATGAGAAGATGGCATGAGAGGATAAAACATTATATAACAAATAAACCCAAAAGAAAGGCTTCTTTTGGGTAGAATAAACATACATGTCTCAGCTCAACTACACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTC‑AATCGCTTTATACACACTCTTGTGTATTTCTAAGCTGTTCCTATCGTATTA  >  CP006881/2195230‑2195499

ggTGGGACAAGCTGTCCTCTAAAAATGCGGAAATGTTTGATTGGAAATTCATTGCTCTCACTCCTTATGGCAAGGAGAATGAGAAGATGGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGActt                                                                                                                                      >  7:338429/1‑139 (MQ=255)

 gtgggACAAGCTGTCCTCTAAAAATGCGGAAATGTTTGATTGGAAATTCATTGCTCTCACTCCTTATGGCAAGGAGAATGAGAAGATGGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGActtc                                                                                                                                     >  2:366934/4‑139 (MQ=255)

      aCAAGCTGTCCTCTAAAAATGCGGAAATGTTTGATTGGAAATTCATTGCTCTCACTCCTTATGGCAAGGAGAATGAGAAGATGGCATGAGAGGATAAAATACTATATAACAAATAAACCAAAAATAAAGACTTATTTTg                                                                                                                                >  2:399019/1‑139 (MQ=255)

       cAAGCTGTCCTCTAAAAATGCGGAAATGTTTGATTGGAAATTCATTGCTCTCACTCCTTATGGCAAGGAGAATGAGAAGATGGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTgg                                                                                                                               <  4:223552/139‑1 (MQ=255)

        aaGCTGTCCTCTAAAAATGCGGAAATGTTTGATTGGAAATTCATTGCTCTCACTCCTTATGGCAAGGAGAATGAGAAGATGGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTggg                                                                                                                              <  3:72021/139‑1 (MQ=255)

        aaGCTGTCCTCTAAAAATGCGGAAATGTTTGATTGGAAATTCATTGCTCTCACTCCTTATGGCAAGGAGAATGAGAAGATGGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTggg                                                                                                                              <  2:279820/139‑1 (MQ=255)

         atcTGTCCTCTAAATATGCGGAAATCTTTGATTGGAAATTCATTGCTCTCAATCCTTATGGCAAGGAGAATGAGAAGATGGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGt                                                                                                                             <  8:235088/137‑1 (MQ=255)

         aGCTGTCCTCTAAAAATGCGGAAATGTTTGATTGGAAATTCTATGCTCTCACTCCTTATGGCAAGGAGAATGAGAAGATGGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGCAAGACTTCTTTTgtgt                                                                                                                             >  6:333366/1‑139 (MQ=255)

         aGCTGTCCTCTAAAAATGCGGAAATGTTTGATTGGAAATTCATTGCTCTCACTCCTTATGGCAAGGAGAATGAGAAGATGGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGt                                                                                                                             <  8:184134/139‑1 (MQ=255)

         aGCTGTCCTCTAAAAATGCGGAAATGTTTGATTGGAAATTCATTGCTCTCACTCCTTATGGCAAGGAGAATGAGAAGATGGAATGAGAGGATAAAATACTATGTAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGt                                                                                                                             <  8:233105/139‑1 (MQ=255)

              tCCTCTAAAAATGCGGAAATGTTTGATTGGAAATTCATTGCTCTCACTCCTTATGGCAAGGAGAATGAGAAGATGGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGaa                                                                                                                         >  2:309845/1‑138 (MQ=255)

                   tAAAAATGCGGAAATGTTTGATTGGAAATTCATTGCTCTCACTCCTTATGGCAAGGAGAATGAGAAGATGGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAaca                                                                                                                   >  1:149861/1‑139 (MQ=255)

                      aaaTGCGGAAATGTTTGATTGGAAATTCATTGATCTCACTCCTTATGGCAAGGAGAATGAGAAGATGGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAACAAAGACTTCTTTTGGGTAGAATAAacataa                                                                                                                <  2:228610/139‑2 (MQ=255)

                           gggaaATGTTTGATTTGAAATTCATTGCTCTCTCTCCTTATGGCTAGGAGAATGAGAAGATGGCATGAGAGGATAAAATACTATTTAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGATTAAAGATA‑ATGtct                                                                                                          <  3:364594/137‑1 (MQ=255)

                             gaaATGTTTGATTGGAAATTCATTGCTCTCACTCCTTATGGCAAGGAGAATGAGAAGATGGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGtct                                                                                                          >  8:76004/1‑137 (MQ=255)

                             gaaATGTTTGATTGGAAATTCATTGCTCTCACTCCTTATGGCAAGGAGAATGAGAAGATGGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGtct                                                                                                          >  6:441428/1‑137 (MQ=255)

                                aTGTTTGATTGGAAATTCATTGCTCTCACTCCTTATGGCAAGGAGAATGAGAAGATGGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCt                                                                                                     <  2:316396/139‑1 (MQ=255)

                                aTGTTTGATTGGAAATTCATTGCTCTCACTCCTTATGGCAAGGAGAATGAGAAGATGGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGATAGAATAAACATA‑ATGTCTCAGCt                                                                                                     <  4:350358/139‑1 (MQ=255)

                                     tgATTGGAAATTCATTGCTCTCACTCCTTATGGCAAGGAGAATGAGAAGATGGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAAc                                                                                                 <  3:123803/137‑1 (MQ=255)

                                     tgATTGGAAATTCATTGCTATCACTCCTTATGGCAAGGATAATCAGAAGATGGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAAc                                                                                                 <  5:214624/137‑1 (MQ=255)

                                       aTTGGAAATTCATTGCTCTCACTCCTTATGGCAAGGAGAATGAGAAGATGGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTa                                                                                               <  4:110661/138‑1 (MQ=255)

                                       aTTGGAAATTCATTGCTCTCACTCCTTATGGCAACGAGAATGAGAAGATGGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTa                                                                                               <  3:377253/138‑1 (MQ=255)

                                       aTTGGAAATTCATTGCTATCACTCCTTATTGCAAGGAGAATGAGAAGATGGCATGAGAGGATAAAATACAATATAACAAAAAAACCCAAAAGAAAGACTACTATTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTa                                                                                               >  7:375637/1‑138 (MQ=255)

                                              attcATTGCTCTCACTCCTTATGGCAAGGAGAATGAGAAGATGGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCAtt                                                                                       <  7:195300/136‑1 (MQ=255)

                                              attcATTGCTCTCACTCCTTATGGCAAGGAGAATGAGAAGATGGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCAtt                                                                                       <  6:122708/136‑1 (MQ=255)

                                                  aTTGCTCTCACTCCTTATGGCAAGGAGAATGAGAAGATGGCATGAGAGGATAAAATACTATAAAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATtctc                                                                                    <  6:378905/138‑1 (MQ=255)

                                                   ttGCTCTCACTCCTTATGGCAAGGAGAATGAGAAGATGGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTg                                                                                  <  8:338429/139‑1 (MQ=255)

                                                   ttGCTCTCACTCCTTATGGCAAGGAGAATGAGAAGATGGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTg                                                                                  <  1:211087/139‑1 (MQ=255)

                                                   ttGCTCTCACTCCTTATGGCAAGGAGAATGAGAAGATGGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTg                                                                                  <  6:445619/139‑1 (MQ=255)

                                                   ttGCTCTCACTCCTTATGGCAAGGAGAATGAGAAGATGGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTg                                                                                  <  6:349195/139‑1 (MQ=255)

                                                           aCTCCTTATGGCAAGGAGAATGAGAAGATGGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTa                                                                          <  2:132956/139‑1 (MQ=255)

                                                           aCTCCTTATGGCAAGGAGAATGAGAAGATGGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTa                                                                          <  1:366934/139‑1 (MQ=255)

                                                           aCTCCTTATGGCAAGGAGAATGAGAAGATGGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTa                                                                          <  6:251019/139‑1 (MQ=255)

                                                           aCTCCTTATGGCAAGGAGAATGAGAAGATGGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTa                                                                          <  3:156378/139‑1 (MQ=255)

                                                           aCTCCTTATGGCAAGGAGAATGAGAAGATGGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTa                                                                          <  1:283195/139‑1 (MQ=255)

                                                           aCTCCTTATGGCAAGGAGAATGAGAAGATGGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGGCTCAGCTCAACTAAACTCATTCTCTGCTAccc                                                                            <  5:410789/137‑1 (MQ=255)

                                                           aCTCCTTATGGCAAGGAGAATGAGAAGATCGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTa                                                                          <  1:252238/139‑1 (MQ=255)

                                                                ttATGGCAAGGAGAATGAGAAGATGGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATa                                                                                                                       <  1:429365/90‑1 (MQ=255)

                                                                 tATGGCAAGGAGAATGAGAAGATGGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATtctc                                                                     >  4:440788/1‑138 (MQ=255)

                                                                     gCAAGGAGAATGAGAAGATGGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTaact                                                                >  4:321244/1‑139 (MQ=255)

                                                                     gCAAGGAGAATGAGAAGATGGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTaact                                                                >  4:213210/1‑139 (MQ=255)

                                                                         ggAGAATGAGAAGATGGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCt                                                                                                     >  6:270708/1‑98 (MQ=255)

                                                                         ggAGAATGAGAAGATGGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCt                                                                                                     <  5:270708/98‑1 (MQ=255)

                                                                         ggAGAATGAGAAGATGGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTa                                                                          >  5:389623/1‑125 (MQ=255)

                                                                         ggAGAATGAGAAGATGGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTaactcaac                                                            >  1:432160/1‑139 (MQ=255)

                                                                                  gaagaTGGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTctaa                                                   <  5:72024/139‑4 (MQ=255)

                                                                                  gaagaTGGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTctaa                                                   <  5:176486/139‑4 (MQ=255)

                                                                                   aagaTGGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTctaa                                                   <  5:441428/138‑4 (MQ=255)

                                                                                       tGGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTctaa                                                   >  8:202075/1‑131 (MQ=255)

                                                                                        ggCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTctaa                                                   >  2:328918/1‑130 (MQ=255)

                                                                                        ggCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTctaa                                                   <  1:328918/133‑4 (MQ=255)

                                                                                              agagGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATaca                                       <  6:374894/139‑1 (MQ=255)

                                                                                               gagGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATaca                                       <  1:399019/138‑1 (MQ=255)

                                                                                                agGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTctaa                                                   >  2:100376/1‑122 (MQ=255)

                                                                                                agGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTctaa                                                   <  1:100376/125‑4 (MQ=255)

                                                                                                 ggATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATacacac                                    <  1:246289/139‑1 (MQ=255)

                                                                                                  gATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCACCTCATTCTAATTGCTTTATACACAct                                   >  3:138914/1‑139 (MQ=255)

                                                                                                  gATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATacacac                                    >  3:132672/1‑138 (MQ=255)

                                                                                                  gATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACAct                                   >  5:11845/1‑139 (MQ=255)

                                                                                                      aaatactatataACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCtt                                <  4:92375/132‑1 (MQ=255)

                                                                                                        atactatataACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTtgtg                             <  8:280871/135‑1 (MQ=255)

                                                                                                        atactatataACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTtgtg                             <  4:152505/135‑1 (MQ=255)

                                                                                                        atactatataACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑AAGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTtgtg                             <  8:159832/135‑1 (MQ=255)

                                                                                                          actatataACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTa                           >  5:297027/3‑139 (MQ=255)

                                                                                                            tatataACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTAtt                         >  6:4062/1‑139 (MQ=255)

                                                                                                            tatataACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTAtt                         >  2:114013/1‑139 (MQ=255)

                                                                                                            tatataACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTAtt                         >  4:138686/1‑139 (MQ=255)

                                                                                                             atataACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTctaa                                                   >  1:229372/1‑109 (MQ=255)

                                                                                                             atataACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTctaa                                                   <  2:229372/112‑4 (MQ=255)

                                                                                                             atataACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTctaa                                                   <  4:254822/112‑4 (MQ=255)

                                                                                                             atataACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTATCTGCTACCCTATACTCTAACTCAACTCATTCTAATTGCTTTATAAACACTCTTGTGTAttt                        >  5:64691/1‑139 (MQ=255)

                                                                                                              tataACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTc                       >  1:40013/1‑139 (MQ=255)

                                                                                                                  aCAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAg                   <  7:76478/139‑1 (MQ=255)

                                                                                                                  aCAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAg                   <  4:138914/139‑1 (MQ=255)

                                                                                                                  aCAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAg                   <  4:132672/139‑1 (MQ=255)

                                                                                                                  aCAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAg                   <  3:218396/139‑1 (MQ=255)

                                                                                                                  aCAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACAT‑‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAg                   <  4:326493/138‑1 (MQ=255)

                                                                                                                   cAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGc                  >  6:84797/1‑139 (MQ=255)

                                                                                                                   cAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGc                  <  4:390620/139‑1 (MQ=255)

                                                                                                                   cAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGc                  >  3:390620/1‑139 (MQ=255)

                                                                                                                   cAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGACTCAGCTCAACTAAACTCATTATCTGCTACACTATTAACTAACTCAACTCATTCTAAATGCTTTATACAAACACTTGTGTATTTCt                      >  8:138975/1‑135 (MQ=255)

                                                                                                                      aTAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATacaca                                     <  2:411038/117‑1 (MQ=255)

                                                                                                                      aTAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATacaca                                     >  1:411038/1‑117 (MQ=255)

                                                                                                                      aTAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATaca                                       <  8:407870/115‑1 (MQ=255)

                                                                                                                      aTAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATaca                                       >  7:407870/1‑115 (MQ=255)

                                                                                                                      aTAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATaca                                       <  7:206236/115‑1 (MQ=255)

                                                                                                                      aTAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATaca                                       >  8:206236/1‑115 (MQ=255)

                                                                                                                      aTAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTtgtg                             >  7:284597/1‑125 (MQ=255)

                                                                                                                      aTAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTtgtg                             <  8:284597/125‑1 (MQ=255)

                                                                                                                      aTAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAg                   >  7:303939/1‑135 (MQ=255)

                                                                                                                      aTAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAg                   <  8:303939/135‑1 (MQ=255)

                                                                                                                      aTAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGCTGt               >  4:2379/1‑139 (MQ=255)

                                                                                                                      aTAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGCTGt               >  6:93944/1‑139 (MQ=255)

                                                                                                                        aaaCCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACActc                                  >  2:70509/1‑118 (MQ=255)

                                                                                                                        aaaCCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACActc                                  <  1:70509/118‑1 (MQ=255)

                                                                                                                            ccAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGCTGTTCTTAt         <  4:415678/139‑1 (MQ=255)

                                                                                                                              aaaaGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGCTGTTCTTATCg       <  3:321244/139‑1 (MQ=255)

                                                                                                                              aaaaGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGCTGTTCTTATCg       <  3:213210/139‑1 (MQ=255)

                                                                                                                                aagaaagaCTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGCTGTTCTTATCGTa     >  6:151440/1‑139 (MQ=255)

                                                                                                                                   aaagACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGCTGTTCTTATCGTATTa  <  6:369960/139‑1 (MQ=255)

GGTAGGACAAGCTGTCCTGTAAAAATGAAGAAATGTTGGATTGGTAATACATTGCTCTCACTCCTTATGGCAAGGAGAATGAGAAGATGGCATGAGAGGATAAAACATTATATAACAAATAAACCCAAAAGAAAGGCTTCTTTTGGGTAGAATAAACATACATGTCTCAGCTCAACTACACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTC‑AATCGCTTTATACACACTCTTGTGTATTTCTAAGCTGTTCCTATCGTATTA  >  CP006881/2195230‑2195499

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`