Predicted mutation
evidence seq id position mutation annotation gene description
RA CP006881 2,195,408 C→A intergenic (‑127/+89) U712_10995 ← / ← U712_11000 Anthranilate synthase component 1/Chorismate mutase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0068812,195,4080CA100.0% 330.4 / NA 104intergenic (‑127/+89)U712_10995/U712_11000Anthranilate synthase component 1/Chorismate mutase
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base A (46/58);  total (46/58)

Only 100 of 104 total aligned reads displayed.

AATACATTGCTCTCACTCCTTATGGCAAGGAGAATGAGAAGATGGCATGAGAGGATAAAACATTATATAACAAATAAACCCAAAAGAAAGGCTTCTTTTGGGTAGAATAAACATACATGTCTCAGCTCAACTACACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTC‑AATCGCTTTATACACACTCTTGTGTATTTCTAAGCTGTTCCTATCGTATTACAATTCAGTATTTTTTGTCAATGATAAATCGGGTCTTAATA  >  CP006881/2195275‑2195540
                                                                                                                                     |                                                                                                                                     
aaTTCATTGCTCTCACTCCTTATGGCAAGGAGAATGAGAAGATGGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCAt                                                                                                                                 >  6:176486/1‑139 (MQ=255)
aaTTCATTGCTCTCACTCCTTATGGCAAGGAGAATGAGAAGATGGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCAt                                                                                                                                 <  1:309845/139‑1 (MQ=255)
 attcATTGCTCTCACTCCTTATGGCAAGGAGAATGAGAAGATGGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCAtt                                                                                                                                <  6:122708/136‑1 (MQ=255)
 attcATTGCTCTCACTCCTTATGGCAAGGAGAATGAGAAGATGGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCAtt                                                                                                                                <  7:195300/136‑1 (MQ=255)
     aTTGCTCTCACTCCTTATGGCAAGGAGAATGAGAAGATGGCATGAGAGGATAAAATACTATAAAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATtctc                                                                                                                             <  6:378905/138‑1 (MQ=255)
      ttGCTCTCACTCCTTATGGCAAGGAGAATGAGAAGATGGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTg                                                                                                                           <  1:211087/139‑1 (MQ=255)
      ttGCTCTCACTCCTTATGGCAAGGAGAATGAGAAGATGGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTg                                                                                                                           <  6:349195/139‑1 (MQ=255)
      ttGCTCTCACTCCTTATGGCAAGGAGAATGAGAAGATGGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTg                                                                                                                           <  6:445619/139‑1 (MQ=255)
      ttGCTCTCACTCCTTATGGCAAGGAGAATGAGAAGATGGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTg                                                                                                                           <  8:338429/139‑1 (MQ=255)
              aCTCCTTATGGCAAGGAGAATGAGAAGATGGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTa                                                                                                                   <  1:366934/139‑1 (MQ=255)
              aCTCCTTATGGCAAGGAGAATGAGAAGATGGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTa                                                                                                                   <  1:283195/139‑1 (MQ=255)
              aCTCCTTATGGCAAGGAGAATGAGAAGATGGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTa                                                                                                                   <  6:251019/139‑1 (MQ=255)
              aCTCCTTATGGCAAGGAGAATGAGAAGATGGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTa                                                                                                                   <  1:58852/139‑1 (MQ=255)
              aCTCCTTATGGCAAGGAGAATGAGAAGATGGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTa                                                                                                                   <  3:156378/139‑1 (MQ=255)
              aCTCCTTATGGCAAGGAGAATGAGAAGATGGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTa                                                                                                                   <  2:132956/139‑1 (MQ=255)
              aCTCCTTATGGCAAGGAGAATGAGAAGATGGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGGCTCAGCTCAACTAAACTCATTCTCTGCTAccc                                                                                                                     <  5:410789/137‑1 (MQ=255)
              aCTCCTTATGGCAAGGAGAATGAGAAGATCGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTa                                                                                                                   <  1:252238/139‑1 (MQ=255)
                    tATGGCAAGGAGAATGAGAAGATGGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATtctc                                                                                                              >  4:440788/1‑138 (MQ=255)
                        gCAAGGAGAATGAGAAGATGGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTaact                                                                                                         >  4:321244/1‑139 (MQ=255)
                        gCAAGGAGAATGAGAAGATGGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTaact                                                                                                         >  4:213210/1‑139 (MQ=255)
                            ggAGAATGAGAAGATGGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTa                                                                                                                   >  5:389623/1‑125 (MQ=255)
                            ggAGAATGAGAAGATGGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTaactcaac                                                                                                     >  1:432160/1‑139 (MQ=255)
                            ggAGAATGAGAAGATGGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTaactcaa                                                                                                      >  5:369960/1‑138 (MQ=255)
                                  tGAGAAGATGGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGAAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTATAACTCAACTCAtac                                                                                               >  4:76181/1‑137 (MQ=255)
                                     gaagaTGGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTctaa                                                                                            <  8:261565/139‑4 (MQ=255)
                                     gaagaTGGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTctaa                                                                                            <  5:176486/139‑4 (MQ=255)
                                     gaagaTGGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTctaa                                                                                            <  5:72024/139‑4 (MQ=255)
                                      aagaTGGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTctaa                                                                                            <  5:441428/138‑4 (MQ=255)
                                          tGGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTctaa                                                                                            <  7:202075/134‑4 (MQ=255)
                                          tGGCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTctaa                                                                                            >  8:202075/1‑131 (MQ=255)
                                           ggCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTctaa                                                                                            >  2:328918/1‑130 (MQ=255)
                                           ggCATGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTctaa                                                                                            <  1:328918/133‑4 (MQ=255)
                                              aTGAGAGGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTta                                                                                    >  2:246289/1‑138 (MQ=255)
                                                 agagGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATaca                                                                                <  6:374894/139‑1 (MQ=255)
                                                  gagGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATaca                                                                                <  1:399019/138‑1 (MQ=255)
                                                   agGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTctaa                                                                                            >  2:100376/1‑122 (MQ=255)
                                                   agGATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTctaa                                                                                            <  1:100376/125‑4 (MQ=255)
                                                   agGATAAAATACTATAAAACAAATAAACCCAAAAGAAAGACTTCTTTAGGGTAGAATAAACATA‑ATGTCTCAGCGCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCGTTATacaca                                                                              <  4:248155/139‑1 (MQ=255)
                                                    ggATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATacacac                                                                             <  1:246289/139‑1 (MQ=255)
                                                     gATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCACCTCATTCTAATTGCTTTATACACAct                                                                            >  3:138914/1‑139 (MQ=255)
                                                     gATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATacacac                                                                             >  3:132672/1‑138 (MQ=255)
                                                     gATAAAATACTATATAACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACAct                                                                            >  5:11845/1‑139 (MQ=255)
                                                         aaatactatataACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCtt                                                                         <  4:92375/132‑1 (MQ=255)
                                                           atactatataACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTtgtg                                                                      <  4:152505/135‑1 (MQ=255)
                                                           atactatataACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTtgtg                                                                      <  8:280871/135‑1 (MQ=255)
                                                           atactatataACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑AAGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTtgtg                                                                      <  8:159832/135‑1 (MQ=255)
                                                             actatataACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTa                                                                    >  5:297027/3‑139 (MQ=255)
                                                               tatataACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTAtt                                                                  >  4:138686/1‑139 (MQ=255)
                                                               tatataACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTAtt                                                                  >  6:4062/1‑139 (MQ=255)
                                                               tatataACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTAtt                                                                  >  2:114013/1‑139 (MQ=255)
                                                                atataACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTctaa                                                                                            <  2:229372/112‑4 (MQ=255)
                                                                atataACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTctaa                                                                                            <  4:254822/112‑4 (MQ=255)
                                                                atataACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTctaa                                                                                            >  1:229372/1‑109 (MQ=255)
                                                                atataACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTctaa                                                                                            >  3:254822/1‑109 (MQ=255)
                                                                atataACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTATCTGCTACCCTATACTCTAACTCAACTCATTCTAATTGCTTTATAAACACTCTTGTGTAttt                                                                 >  5:64691/1‑139 (MQ=255)
                                                                 tataACAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTc                                                                >  1:40013/1‑139 (MQ=255)
                                                                     aCAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAg                                                            <  7:76478/139‑1 (MQ=255)
                                                                     aCAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAg                                                            <  3:218396/139‑1 (MQ=255)
                                                                     aCAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAg                                                            <  4:132672/139‑1 (MQ=255)
                                                                     aCAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAg                                                            <  4:138914/139‑1 (MQ=255)
                                                                     aCAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACAT‑‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAg                                                            <  4:326493/138‑1 (MQ=255)
                                                                      cAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGc                                                           >  6:84797/1‑139 (MQ=255)
                                                                      cAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGc                                                           >  3:390620/1‑139 (MQ=255)
                                                                      cAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGc                                                           <  4:390620/139‑1 (MQ=255)
                                                                      cAAATAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGACTCAGCTCAACTAAACTCATTATCTGCTACACTATTAACTAACTCAACTCATTCTAAATGCTTTATACAAACACTTGTGTATTTCt                                                               >  8:138975/1‑135 (MQ=255)
                                                                         aTAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATacaca                                                                              <  2:411038/117‑1 (MQ=255)
                                                                         aTAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATacaca                                                                              >  1:411038/1‑117 (MQ=255)
                                                                         aTAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATaca                                                                                >  7:407870/1‑115 (MQ=255)
                                                                         aTAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATaca                                                                                <  7:206236/115‑1 (MQ=255)
                                                                         aTAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATaca                                                                                >  8:206236/1‑115 (MQ=255)
                                                                         aTAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATaca                                                                                <  8:407870/115‑1 (MQ=255)
                                                                         aTAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTtgtg                                                                      <  8:284597/125‑1 (MQ=255)
                                                                         aTAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTtgtg                                                                      >  7:284597/1‑125 (MQ=255)
                                                                         aTAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAg                                                            <  8:303939/135‑1 (MQ=255)
                                                                         aTAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAg                                                            >  7:303939/1‑135 (MQ=255)
                                                                         aTAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGCTGt                                                        >  6:93944/1‑139 (MQ=255)
                                                                         aTAAACCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGCTGt                                                        >  4:2379/1‑139 (MQ=255)
                                                                           aaaCCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACActc                                                                           >  2:70509/1‑118 (MQ=255)
                                                                           aaaCCCAAAAGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACActc                                                                           <  1:70509/118‑1 (MQ=255)
                                                                                 aaaaGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGCTGTTCTTATCg                                                <  3:213210/139‑1 (MQ=255)
                                                                                 aaaaGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGCTGTTCTTATCg                                                <  7:9630/139‑1 (MQ=255)
                                                                                 aaaaGAAAGACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGCTGTTCTTATCg                                                <  3:321244/139‑1 (MQ=255)
                                                                                   aagaaagaCTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGCTGTTCTTATCGTa                                              >  6:151440/1‑139 (MQ=255)
                                                                                      aaagACTTCTTTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGCTGTTCTTATCGTATTa                                           <  6:369960/139‑1 (MQ=255)
                                                                                         gacttcttTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGCTGTTCTTATCGTATTACaa                                        >  6:33664/3‑139 (MQ=255)
                                                                                         gacttcttTTGGGTAGAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTATAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTATAAGATGTTCTTATCGTATTACa                                         >  6:27681/3‑138 (MQ=255)
                                                                                                        gAATAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGCTGTTCTTATCGTATTACAATTCAGTATTTTTTGt                         <  3:425600/139‑1 (MQ=255)
                                                                                                         aaTAAACATA‑ATGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGCTGTTCTTATCGTATTACAATTCAGTATTTTTTGt                         >  8:216423/1‑138 (MQ=255)
                                                                                                               acataatGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGCTGTTCTTATCGTATTACAATTCAGTATTTTTTGTCAATGa                   <  2:432160/134‑1 (MQ=255)
                                                                                                                 ataatGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGCTGTTCTTATAGTATTACAATTCAGTATTTTTTGTCAATGAt                  >  6:346066/4‑138 (MQ=255)
                                                                                                                    atGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGCTGTTCTTATCGTATTACAATTCAGTATTTTTTGTCAATGATAAAt              <  7:216423/139‑1 (MQ=255)
                                                                                                                    atGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGCTGTTCTTATCGTATTACAATTCAGTATTTTTTGTCAATGATAAAt              >  3:237381/1‑139 (MQ=255)
                                                                                                                    atGTCTCAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGCTGTTCTTATCGTATTACAATTCAGTATTTTTTGTCAATGATAAAt              >  2:317271/1‑139 (MQ=255)
                                                                                                                         tcAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTaa                                                             <  5:4044/87‑1 (MQ=255)
                                                                                                                         tcAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTaa                                                             >  6:4044/1‑87 (MQ=255)
                                                                                                                         tcAGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGCTGTTCTTATCGTATTACAATTCAGTATTTTTTGTCAATGATAAATCgggc         >  3:12029/1‑138 (MQ=255)
                                                                                                                           aGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGCTGTTCTTATCGTATTACAATTCAGTATTTTTTGTCAATGATAAATCgggcc        >  2:365273/1‑136 (MQ=255)
                                                                                                                           aGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGCTGTTCTTATCGTATTACAATTCAGTATTTTTTGTCAATGATAAATCgggc         <  5:151440/137‑2 (MQ=255)
                                                                                                                           aGCTCAACTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTCTAATTGCTTTATACACACTCTTGTGTATTTCTAAGCTGTTCTTATCGTATTACAATTCAGTATTTTTTGTCAATGATAAATCgggc         <  2:149861/137‑2 (MQ=255)
                                                                                                                                aaCTAAACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCAATCTAATTGCTTTATACACACTCATGTGTATTTCTAAGATGTTCTTATAGTATTACAATTCAGTATTTTTTGTCAATTATAAATCGGGACTCAATa  >  2:304816/1‑139 (MQ=255)
                                                                                                                                     |                                                                                                                                     
AATACATTGCTCTCACTCCTTATGGCAAGGAGAATGAGAAGATGGCATGAGAGGATAAAACATTATATAACAAATAAACCCAAAAGAAAGGCTTCTTTTGGGTAGAATAAACATACATGTCTCAGCTCAACTACACTCATTCTCTGCTACCCTATTCTCTAACTCAACTCATTC‑AATCGCTTTATACACACTCTTGTGTATTTCTAAGCTGTTCCTATCGTATTACAATTCAGTATTTTTTGTCAATGATAAATCGGGTCTTAATA  >  CP006881/2195275‑2195540

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑